XLOC_005764 (gene) - C. hemisphaerica

Overview
NameXLOC_005764
Unique NameXLOC_005764
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000104:41668..45101+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005764 ID=XLOC_005764|Name=XLOC_005764|organism=Clytia hemisphaerica|type=gene|length=3434bp|location=Sequence derived from alignment at sc0000104:41668..45101+ (Clytia hemisphaerica)
actGAAGGGCGCAAAAATGTAAGAGGCACAATTATAAGGGAATGAAGGTA
gttattcttgaaaaaattcaatgtgatagaagtaaaatttcaaatgcaaa
tttttttttcatttgtagaataaaagcttgaaaaaaatgaaatttttatc
agtAGGTAAAAGATTTTTCTCAAACCACAGTGCATTCAGAAGGATGCTGA
AGATGGGTGATATTTTGGAGGAACATTATCAAAATGGTTTGACCAATTAT
TCCAATCCACAAAATAAACAATTGATAAAAAATCTGATGGTTGAAAATGA
TCATGTGTTCAGTAGTGAAGACCAAATAAAGGTAGACAAAATATTGCTAG
CCATAATATATACAAAGTAGGCCTTGTTGAGAAACTTCATAACTCAATTT
AATAATTTAATAGGATGGTCTAAAATTGGGCTCTTATATCGTGCATATTG
AACTTAACTTGGCAAAAGTTATGTTACTTGAAAATGTTCTTCTTATTGCA
GCAGAAAATCACGTTTTCTTTTCTGCCAGTACTAGTAGGGGGCCAACTTT
TAGGATCTGCAGCATGTTTCTTGGGACGCAACTGCGTGTGATGCTGAGCA
AAAAGATATACTACAATAACTTGGACAGATGTGTCTCACGACGAAAGATA
CTACGGATCTGAAGGGTTTTCCTCCTACTATAAACCTTCTTCCATAATCC
AATTCCAATAATCTTTatactcaaagtttttgaaaattataccTTAGTTT
CGAATATaaatgttttagttttttttgtttatttctagcGTTGGATCTAT
AGAAGGAAAGCAAACGAAAAAAAGAATACACTTTCGTTTCCTCATACTCT
TACAGATGGTATACTTTGATCTACCTTAAAGGACAAAATTTTGGCTAGAT
TTAATTtagcggatggccgaaaaaattttcggagagaatttaatttggca
gatggcttGAAAAATTAAGTTTGATGGGAATtgatgaaagatatttttta
ccaaaaaattctgttaaattagaaaaaaacctgttttaaagctTGAAATA
GCACACACTTCGAGAATAAATACAATAACTACTTgcgggaaaaataaatt
tgatggATTTTAGCCAAttctgccaaattttctttccaccaTAAATTCTT
GTCTTAAGGTATTTCATTTTGATGCAACAAACTCATATTACTATTATTGC
TATCAGTACTAGTTGAATAACCAGTTGATTTCTCATAATATTATAATTCT
AAGTTAATCTCAGAAAATGTATTTGGTTGTAGGTTTCGAAGGCCTTTTTT
TGGAACTTTTAGAATTCGTTCAACTTGACTTAAAATAGTATCAAAATTTA
CGTAATTTACACTACATGTAGTAATTCCATGGTCAGTTCTTGAATGCTAC
AACCTCCCATCAAAACTAGTTGCTGAGGTAGAGTTTTGGcagtcggaacc
actacatGAAAAGttactattgccttaacgggaaatattaaCCGAACGGG
AAGGTAAAAATAACCcgaaaaggaaactgtttccagattgaaaatttcat
tacttttctgtttcccgttttggtcaagaacttttcatcgtccccgaacg
ggaaatataattttgtaaacaaagcagattttgtttcccgatcgagaaaa
agtttccaaatagggaagtttttaattgggaatCTGGAAATTAGAATTAA
AGAAGCGATAACCTggtggatttcttaactacctggtgaatattatttat
tttccctCCTTTACAAGAAGGATAAGTTTAAAACTTTCCACAGGAATTTC
CGGAGTGCTCAGAGGCCACTTTCCCGATAGGGAAACTGGTGAACTTCCCG
ATTTGGAAAGTCTATTCATTTCGGGAAGTTttccaccttcccgttcggga
aatatttcctgttaaggcaatagttgccttttCCATGTAGTGGTCCCGAC
TGTTTGGTGCTTTGAAGAGAATTTAAAATTGCTAAGATTGTCAACTGATA
ACACAGCTAGCACAGGAAGAACTTTTTAATAATTaacataagaaaaaaaa
ttatgatagcTTTTATATTCTAGGTACTCAGCAACCGAAACCAATTGATG
TCACTTCACTAAATCTACCAGTATGGAAACACTATCTTGAAGACTGTCCA
ATGCAAGATAGAGACTGGGTACTAGACGGCATTCAAAATGGATTCTCTTT
AGATTTTGATTCTACACCGTTGTCAAGTGCCAGCAAGAACTTACTATCAG
CTCATATCCAACCTGGTATCATTGATGACTACCTGGAGATGGAATTGAAA
CAAGGAACCATGTTGGGACCATATAAAGATCCCCCTTATGATCAGTGTCA
AATTAACCGGTTTGGTGTGATACCGAAATCAGATGGTAAATTCCGAATGA
TCACTGATCTGTCTTTTCCCCTTGGCGAAAGTGTTAACGATGGAATATCT
AAAGAAAATTCGACTGTTTCCTATACTGGACTTACTGCCGCAGTTAAAAA
GATTCTAGCTCTCGGTAAAGGATGTTTGTTGGCAAAATTCGATATTCAAC
GAGCATATAGGATGATTCCATTACAAGAGGATGAACGTAATTTAGTTGTC
ATCAAATGGAAAGATTATTACTTTGTTGATCTAGCATTACCATTCGGAGC
TAGGAGTGCACCAAGAATATTTACTAGATTCTCCGATGTTTTAGAATGGA
TATTCCTGCAGAAAGGACCTGTCAAACATATGCAACACTCTTTAGATGAT
TTTCTTGTACTAGGACTATCACAGTCTAATGATTGCCAAAAAGGTTTGGA
GAACTCTTTAGGACTTTGCCAAGAACTAGGTGTTCCTATTGAGCATCGAA
AAACAATATACCCAACAACCAGACTCGTCTTTCTTGGCATGGAGATTGAT
ACTGAAAAGATGGAGATGCGAATTCCAGaagaaaaattggataaaatcCG
ACAACTTTTAGATCAATGGGTTCAGAAAAAGTCTGGTACAAAACGCTCAT
TATTATCTCTGATTGGTTCTTTATACTATTGTTGTCAAGCAGTGGTCGTT
GGCAAGCCTTTTATGATTCGATTAACAAAGAAAGCATATTCAGTTGATAA
GTTACATTTTTTAGTTAAATTGGATGAAAAAGAAATCGAGGACTTGATGT
GGTGGTATTATTTATTGAATTCATGGAATGGTAGAAGTTTGATGAGCAAT
TTTGATAAACACCGAAATGTTGTGAAACTTCATTCATAGTTGTTGAACAT
CAATCATTTTTCAATGCTCATTGATTTAAAAGGATTATAATAGCCTACGT
GTAGCTCGATTTTTTAACTCATTTTTTCcagaactttttttatttacttt
gatACCTTATACATAATTGATATTTTCTAATTATTTTCTTATTGTTATGA
TATtatcttttttatgaaaattataaaacCAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010247TCONS_00010247Clytia hemisphaericatranscript
TCONS_00010248TCONS_00010248Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:41668..45101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15	13.8	6.43	4.95	9.52	6.4	4.65	5.52	4.21	3.59	4.13	4.47	4.17	4.17	5.51	4.18	5.83	5.68	1.85	2.8	6.22	6.02	24.22	19.96	2.37	4.48	4.57	3.19	13.81	14.54