TCONS_00010250 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010250
Unique NameTCONS_00010250
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1659

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010250 ID=TCONS_00010250|Name=TCONS_00010250|organism=Clytia hemisphaerica|type=transcript|length=1659bp
TAAAAACAATACTTTTTCAACCATCCATATCATGAACGTCGAAGATGATG
GCTCGGAAGAAGGTGAACTCAAAGATGATGAACTAAATTACGATGGAGGT
GCTGGTGATGTCAACATCGATGATGGAGATAGTGATGTCAACGTCGATGA
TGGAGATAGTGATACTGAAGAAGACAGATTTGTCATCAATACTGAGACAG
AAGATACAGAAGCAGAAGGGGAGATGGTCAATGAAATTCTTCAACATCAA
GATGAAGAAAGTGTTGATAGTGAAATGATGGCCATCCACCACAAACTATC
AAAAAACGAcgGTGCTGGTGATGGGAAAAGTGACGACTTGAAGACGCTTA
GTGAAAAAGAATcgaagaaaattaatttctcCAAACAAATAAGTACAATA
AAAGATGTCAGCACCGACAATGAGAATGAAAATAGTGAAAGAACAACTAT
TATGGTTTTGGATGAAGGTGACGAGATTGAAGATAATattgatgacgatg
atgatgcTTGTAAAATTGATTGGCAACAAACAGCCGTGATACCGAAACCT
CACCTTTTCACTGAAGCCATGTTCAATCAATTCTGCAGTCCACAAAGACT
aaacatacaaaaaatcaatatcTGCGAACAGATCCTTAAGGAACAGCGAT
TTTCTCAATCAAAACAGAAATCTAAGAACGCTGAcgatcaaaacaatcaa
aagaccGAAAAGAAATCGTTAATTGAGAACACATTCAAATTGAAGACAAA
GTATCATTTGACGTTGATGGAGCCTAAACCTTCTCGTATTTCACCTGGTG
ATCGCTATTTCTATATGAAGTATATGGAACATGTTACtaagaaaaataat
gataaatttttgcgaCAACACGAGGATCGTTTTAAGGAAATGTCAAGGAT
AGTGCGTCAGGAACAAAGCGAATATACCACTCATCTTTACCAATGTTTCA
TGGCAAATCCCGCAGAATATTTCTTCATCAATCAACAAGTCAAGCAATTT
ATTAAAAACAATAATATGGAGAGGATTAAAGGATTGTTGGCCGAAAAAAA
GATAATTCCAAAGGAGCATGGGTTTGAGGAATATGGATTTGAGGAAGCTC
GCCTTCAGAAAGATGAGCTACGATGCCGGCACCAATACAATCACCAAGCA
CATTCACTACGGTTACGAGACGATCCAAAAACCAATCCACTGGAATGATA
AGAGTTAACGATTCTTCAGGTAGATCAGCGGCTTGAAGAACCATCAATAC
GGGTATCCAATCATATTGTGGTACTGCACAAGCACTGATAGAGGCTATTG
TAGCTGTTAAACCAATAGCAATATATTGGCCAACGCTTAAGCTCTTACCT
ATTGATTGAGCGATGAAGATTGCAGCGACAGCTTCAAAGAGCGCTGTACC
ATCCATATTGATCGTGGTTCCGATTGGTAGAACGAGTCTGGTAACTCTTT
TATCAATTCCGTTCTTATCTTCAAGGCATTTAAAGGTTACAGGCATGGTA
GCTGAGCTGGAGCTCGTTCCAAACGCGGTCAAGAGCGCTTTGAATGTTCC
TTTGATAAAGGTGAACGGATTCCGTCTTGTCCATACAAAATAGGTCAACG
GCAGAACCACCAAGGAGTGTAGAATCAAACCGGAAATGACAGTAGCCATG
TAATAAGCC
Run BLAST on NCBI

transcript from alignment at sc0000104:45750..56999+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010250 ID=TCONS_00010250|Name=TCONS_00010250|organism=Clytia hemisphaerica|type=transcript|length=11250bp|location=Sequence derived from alignment at sc0000104:45750..56999+ (Clytia hemisphaerica)
TAAAAACAATACTTTTTCAACCATCCATATCATGAACGTCGAAGATGATG
GCTCGGAAGAAGGTGAACTCAAAGATGGTATGAAATCTTTTACATTGTTG
TCGCTTATCTACAATCATTGACGATACGTTTGTCTATCTCCTCTGGTTAA
CCTCTGTAGTTGGGAGTGGTACagggatgtgccgctggtcaggctACCTT
TTTAACCCCCATGACTCACAAggcaggtagggtcgcaaaaatgacacaat
agaaaaatcagttccttgcagggtacctttttgggagAGTTTGGataaaa
agtggaaaattttgagaaaatcagtCAGTGTAGCCATGATTTTAAATATT
CACTCTTTGTTCAAAGATATTCTGGCGAATATGTTTGGAAACTCTATGAT
ATTCAAACAAATGATTTTGTCCATGACCTATCAACACTACTAAAAACCAC
TTTTTTTTCCTCGAGATCATTTGAATTCTTAAAATAGACTCTTAGGAAAT
GACATTGTGTTTGTGTGTGTGTTGCAGTGTTTACACTTGGCTTGGGTAGT
GGTAATATTTGAACATCTGTTTTGAACTATTTACCCTTGATTTTGGTcgt
ataaaatttttctttggatcgttttcattagtttttatttagtttttggc
tgttaaacattttctttcagaAAGATGGGTTTCGGTCTTTCTCAACAGAT
CTGTATGTATTTATgctatgcaccattgcaatgtcttcacggacccaaaa
gctgattggttgtaagtgacgtaaaatcagtcaatacgtcactttcaacc
aattcatgatatgcaccattgcaatgtcttccacggacccaacaccTGAt
tagttaaaagtgacgtattgactgagtGATTTTGCGTCACTTACaatcaa
tcagctattgggtctgtgaagacattgcaatggtgcatagcATAAATACA
TACAGATCTGTTGAGAAAGACCGAAACCCATCTTTCTGAAAGAATATTCC
GCTCGAGTCTTGGATTCTTGTAAATATACTGACACTGGACCGTAAGTTTG
ATAAGACACTATAAAATATGTGGGCTATCAACGTAGAATTTTAGCTTTTG
TATTCAATTGTTGGCAGTTTATTGTTTAATATTGATGGTCAAGTCCGGTC
TTTTTAAGAATATTCCGCTCGAGTCTTGGATTCTTGTAAATATACTGACA
CTGGACCGTAAGTTTGATTAGACACTATAAAATATGNAGTCTTGGATTCT
TGTAAATATACTGACACTGGACCGTAAGTTTGATAAGACACTATAAAATA
TGTGGGCTATCAACGTAGAATTTTAGCTTTTGTATTCAATTGTTGGCAGT
TTATTGTTTAATATTGATGGTCAAGTCCGgtctttttaagaatttttata
TATACAAAATGTTCACTTctcacttttaaattttgtattctcaaaaatgt
attctcaaaaataaaaagggCATGGTATTCCATGGGTCTGTGATATTATC
ATGAAtcgttttttatatttcttCAGATGAACTAAATTACGATGGAGGTG
CTGGTGATGTCAACATCGATGATGGAGATAGTGATGTCAACGTCGATGAT
GGAGATAGTGATACTGAAGAAGACAGATTTGTCATCAATACTGAGGTCTC
TTTTCCTATCCtcgaaatacacttttttttagtAAGAACATTCTAAAGTT
TTTGAAGCTGGCGGATGCTCTCAACAATTTGAGTTTTAAAATAAGCacga
aaatgtttttatttctacCATTTTCTAATTATGATCGTACACTTTTTCTG
AGAAATTTAGTGTTTTGAAATCTGTGTGGCTTTAGAATGTTcttgaaggt
tttgtttttaaataagagtgatattgtctgcttactcgtcaattttgatt
cacattggattgacacggatgtggagcaagattggtcagaaagaggaaaa
gaaaagattaatattttggccatggaagcctcttgttcttatattgttgg
ttcttataaaaaacgtcgAATTGGTAGAAGCATTTTATGCTTTGAAGAAG
TTTATCATATCAATTGTTAAAAGGTTTTCTCTTATTATCATGGCCCGCTA
CTTTTGCAAACCATACTTATGTACATTAGCACAACTTTAAACAGACATCA
TAAAAAACATCATAAAACTGTTTTTCTCCCCAATTAGATAACATTTCAGG
GTTTTTTTAGGGTGAAGTGTAAAATTTATCGTCACCAAACCATGGTGGCC
GACATTTTTTTctctactcttgtctcccgaatagacggggggggggtccg
aataagcaggggcgtatgaaaattttctaaattctaataagagggggggg
atttgaagacagaattttttaaactgatatcaattttaacaacaaaaaag
agaCTTTAGcataaacacgtaaaataaaccagctgcgctggaagctccgg
cttaagagattaaaagatgtgaaaaatgagtttgttgagttgtgttagaa
cgttgcccacaaactaataatcagaaagcaaagtaataaatTTATTGTAG
AGCGAGTATGGGAAATAATCTTAATGAATAAAtcaaccagctggaagttt
agctcttctaagtgattacacatgcaatTTCTTGCCTAAAGTGCCAACCC
AACCCCCTCCCCACTCATCCACCgactaaaaagtacaaaattgtatctaa
aggagataaacatttagaagtcaatatttccaagttcttataaatttata
ttATTCTAAACTAGCCAATAGCCAAGCCATGATGCgcccgttgatttgat
tgtcctgaccgggagaaaaatagcctaaattagaggccacggcttttagc
taccgtcaactgctctaatttgggactatctgacaaaacatgggacggca
attcggccactaTTTCACCGCCGAACCTCCAaggtcatttgatttgaatt
aaGGAACGGCTTATTAAtaaatacacaaaaaaaaatttgttgtcaaagag
atttaacagtaagtgaaaatacagactgatatacagatatgcaacagtcc
catgtttcgaccaatcgtcccaagttagagcagttgacggtaagcaTTAT
TCTCTTGGGATTGTACTTGGAGGAGACTAggataaatcaaataaaatggt
acGATAGTGTGTATGTGATAGTAATATGTTTGGAAAAAATCTGTCAGTCT
GTGTCCggtttaaaaaatcttcaacAGCCCAACGCCCAAACCTTTGAagt
tacgacaaagtccaaaaaatgatcattttcagccacaatactgtgaaaat
ttctccgatcttgttcaaatttacacaggaattgttttttcgtatccttt
attgaattcctACAGTGGTATGTTTGGAAAGAATccgtgtcgggtttgaa
aaatcaccaGCCGATGATGAATACGACAATAACGAAGTCCAAAACAGGTT
ATTTTCAGCCATatataacaccacaaaaactactcagatcgttttcaaat
ttacactgtaattgtaatttagtattctcttttgaatttcaatggctgtg
tgtttgaaagtttcattgtcaagtttgaaaatccaaaagggaCGACCACC
AATTATAtcatcatgaataatgacgAAGTCCAAAATATGATCATTTTTAC
AGCATAAAATCATGAGAAATGCACCAATCTTACTCAAATTTACACACAAG
TAATAAACTGAATTCAAATATATTAATAGTTTGCTCTCAAAAAGTTTCCA
TCAAATCTTGAAAAAACagagtttttttggttttgtgcATCTAGAAGAGA
AGTTTAGCCATAGTTATATGCATTATAAACACTCGATCAGCTGAAGATTC
ATGgtcaaaatttctccaaagtctttccacattgttagagagccagtatg
catcaaacttctcataaatcatgtccaaaacatcatgaataatgatgaaa
atgatcaatttttcactgagattcgCCAGTATTTGTTTCACAGTCAGCta
gtccactttcggcagccatctttttctaaatactttcggtcaatcaaatc
acagtattatcggaatcagtgatccgtttttgttaaatcggaatagatca
tcggattagataaacaaacaaaaatgtcttgaccgtcggaagagagaatt
aaaggctcctaggccggagcaataagaaccaatactaacaaaaaagaaaa
ttttaacaagtttaaggtctatatacactgtaataaaatatagaattatt
cgaatttaattagcggggggggggtcttaataagagcgggggattgactt
tttttctcttaacaattagcgggggtggacgtctattcgggagaaaAGAG
TAAAATATTAGCCTCGTCACTCCAAATGGCTGCTCGGGATTCATGATGAT
TTTGTTCCTTCTCATCACAGACAGAAGATACAGAAGCAGAAGGGGAGATG
GTCAATGAAATTCTTCAACATCAAGATGAAGAAAGTGTTGATAGTGAAAT
GATGGCCATCCACCACAAACTATCAAAAAACGAcggtaatatttaaaaaa
tttcaatagagctaactctttaactcgaacctctattactccagtctcct
taactcgaacaattttCATGATCTCTTCAGTCAACAATGCCTTGTGTTCC
CCTTGCGTGTTCAAATTATGGAAATTCCACTGCGTTTAAAACACTGGTGT
GGACGGTAACGTGCTTTTTCCAGAGAAAAATGTTCACCTGGAAAACCTTT
TGTGATACCTAGGTACAGTAGATGAAAGCCCCTCTGGAATTATATATTTA
AGATTATCCTCGCAGCTTCCGGTTATTTATgacagatttggaaaaaataa
aactaCATTTCATGACCCACCTTCTTTTTTATTAAACGGAAATTTACCTT
TCCAACAGAGGTTGATTTGAGAGctttcaaaaaccaaaaaataacacaaa
aatGGCACTTGCAGCTTTGTTTCCTAGCACTAAAAGACAAATTCCGTAGA
AAGGCCTGCGTCACGTCGCTTTATCTTTTATTGACTTTTACagactcgaa
cctctataacagGAATATCgcattgaaaaactttttttgacacaaaaatt
gtttttcccgtgggttcgagttatggaaactccACTGGAGTGAGTTGGTT
TATATGGTCTATACGGCTTTATTAACTCACCCTGACTTCCTTTTGTTTTC
TCTGGTCAATAGCTCTCTTTGGCTATTAAAACCCAGCATTAGTTTTGACT
TCAGTGAAAAAGCTTATTTTTGAACTGGTTGTCACACAATCTTTCTTCAT
ACGAGACCTGCAACTTCTTTCTATTATAACTCGGTTCGCCGCCTCAAATA
CATATTCACGCTAATCAATACTCTGGGTTTGCTAAGAAATTGTCGGCCTA
GAATCTTAAAATTCGTcggagttaatttttcattcaaaaacgtAAATAAT
CTAACAACCTGTGAATTGCCGCCCTTTTTAAAGTCTAACATCACATGCCT
ATGAAGCGCcaaaagaacaataaaaaattcattatcaaaaacaaagcaaa
acttTCGAAGTAACATGAAAAACAAGAAAAGCCAGAATGTTTTAATTTCG
TGAattcattgcagtggtgcatatcacgtTTTCCAATACATATTATTTTA
ATTCTTAATAAACAGGTGCTGGTGATGGGAAAAGTGACGACTTGAAGACG
CTTAGTGAAAAAGAATcgaagaaaattaatttctcCAAACAAATAAGTAC
AATAAAAGATGTCAGCACCGACAATGAGAATGAAAATAGTGAAAGAACAA
CTATTATGGTTTTGGATGAAGGTGACGAGATTGAAGATAATattgatgac
gatgatgatgcTTGTAAAATTGATTGGTAACTTTCTTTGTTTATTGAGCA
TGCTCCCCTAAGCAATAATTTAGTAAATTTGCGGCCGCAATCGAGGACGA
CCCGAAGACTCTCTTCTTTAGTTATCTATCCATAAGTAGGGCCTCTCCAT
CCCAGGATCTTTAGTTTCTGATCATCAAacagaggcatcaagtaccaatC
TTTTGTATGACCCAGTTGGGAtagaacccacaaccttgcgcatcATAGCT
GGATGCTTTATTTTCATGTTACGGCCGCTCCTCTACAAATCCAGTGCCCT
GACCAAATGCATTGTTTGagtaaaaagattaaaaaataatcaatacCACG
TTTAGCATGACGTCTGCTTTGTAGATAAGCCATGAGTTTTTTTCGTCAAG
TTGTCCGTATTTATTACAAGGAGCTTCACTCGTGATATTAAGAAATTTAA
TTGCTGAAAGATTGAGACGTCTGGTTTTAACCTAAACAGGGCCGTTATTT
AGGCCCAGAAAACGGTGAATTCTGCCAGACCAAGGCACgaagaaaattaa
aactcgcCAGCCTTCAAAAACTCGGTTCGCCCCCTCGAGTACATATTcac
gctaatcaatacactggGCTTGCTAAGAATTCAATTTAACTTTTCGTTCC
CCAGTATATCAAAGGCAATGCAATTTGCTGTTATTCCCCTATTTGTTAAT
CAATACACTGGGCTTGCTAAGAATTCAATTTAACTTTTCGTTCCCCAGTA
TATCAAAGGCAATGCAATTTGCTGTTATTCCCctattttttaatcaatac
acTGGGCTTGCTAATAATTCAATTTAACTTTTCGTTCCCCAGTATATCAA
AGGCAATGCAATTTGCTGTTATTCCCCTATTTGTTACTCTATAGGCAACA
AACAGCCGTGATACCGAAACCTCACCTTTTCACTGAAGCCATGTTCAATC
AATTCTGCAGTCCACAAAGACTaaacatacaaaaaatcaatatcTGCGAA
CAGATCCTTAAGGAACAGCGATTTTCTCAATCAAAACAGAAATCTAAGAA
CGCTGAcgatcaaaacaatcaaaagaccGAAAAGAAATCGTTAATTGAGA
ACACATTCAAATTGAAGACAAAGTATCATTTGACGTTGATGGAGCCTAAA
CCTTCTCGTATTTCACCTGGTGATCGCTATTTCTATATGAAGTATATGGA
ACATGTTACtaagaaaaataatgataaatttttgcgaCAACACGAGGATC
GTTTTAAGGTAtacattttgttcttattttcgtaATCCAAAATTTATTCT
TTAATTAAGTTCCTTCTTAATTTAATCTCCCCGCCATccaccaatttaaa
ttcccgccaaattaaattcccgccaaactTAAACCATTGTATTCATTCTC
CCAAAGGTGTGCTGTTTCAggcgttaattttttcttatctaaCAGCGTTT
TTCGGACAAAAAGATCTTTCATCCCACAAATCAAGTTACAGCTAAATTTA
ATAATTTAagccattcgccaaattaaattctctctgaaaaatctttttcg
gtTAAGTACTgtacccgccaaattaaactcccatcaaaatttcttctctt
aaggtatatGTTTCCTGATACAATTCTTTAGAAATCAATAagcctttttt
tgaaaaaggggaTTCTCAAAAATCATATTAGAGATTACTATTACCGAAGT
GACCGTATCTAAAAAATATGTATAGTGCAACCAGCATAAAATGTATAATA
aaggtttttttgcttaaatacaGTGAGTACCTCACTTCCCTAATTGTTTA
AGCATTTGAAGTACATTTCACGTTCGAAATGATTACATGTGtaaaatcag
gactgattgcgctcTCGTGAATGCTTCGCCAGCTTCGCGCTTGTCAAGAT
gcaaaaatctctaaaattttagactatcagaaaatcattttcagaGCGCG
GTCGTGCGAAACGATTTCTTTCGACCGTCAAATGGCTTATATAGGCCAAA
GGTAGACTAGTCAAagcaaaaagagaattatttaGAATTAAATATTTTAC
GCAGCCTTCCCGGTATTTAGAGACTCTTTCGATTGTCATTACGACGTCTA
CGGGCAGGCCGGCTCGCTTTATTTCTGTAAATATAATTATGATTCGCGTA
AACGGGCTCttttaaaacacccccttctcacagacccggtatgatttttt
cagccagtgggggtagcAATAACAGCCTGAAactgttttcaagtcagaaa
gttCAGTGGGGATtggaaaatagcataatattgtGAAGTgaagatttgtt
tatttgatttttttcaatggggacaaaaattaaagtataatttcccactg
gggactaaattttggccaacttttccagtggaaaggggTCCCAagttggt
ctgtgagaagggggtgttttagaTTTTCTTAGATCATTTTTCTGTTCTGA
TGAAGTCTTAATTCTTTACATTCGTTGTGAAAAGATAACTTCGATCGGAT
ATTATCGGTATACCATTCACGTGTTAAATTTTGCTTCGATTTTTCTGTTG
TAGGAAATGTCAAGGATAGTGCGTCAGGAACAAAGCGAATATACCACTCA
TCTTTACCAATGTTTCATGGCAAATCCCGCAGAATATTTCTTCATCAATC
AACAAGTCAAGCAATTTATTAAAGTACGTCTGCATTctttgatttatatt
ttttgctttGACTTTTCTGTAATAAAAGTATAAGtgaatttttaaaggtt
ttgtttttaaataagagtgatatcgtttacattattttaatttacaagct
ttttgatattggattgacacagacgtggagcaatattggtcagaaagaga
agggatggaaaaacaattttttgcttatatcagcacaatataacaatagg
cagacactgtccggATATGAAATATGCGTGTGAAAATAGAACCTTTAAAT
CATCGATAATTATTCTTTACTCCTGAATAGTTTAAAACCACTTTTATGAG
TAAATTATGTTTGATTCTTGTTTATCGACGCATTGTAATAAAAAATCCGG
GACCCGTATTAATTCATCATACACGTAGCACATGTATGGTATTGTCCAAT
TTTTTAACCGAGAATCGTGATTATAGGCTTTAAACTATTTTCAAGACACC
AAAAATTCAATTTACGTCAGGGAATACCTCAccgattcgaacgtttgctt
ctaTAATGGTAGCCTAtgtatactagacgtcacggctttttttctacgca
gtaacgtctatttcactttgcgactttttcgaatgttttgagccctgTTT
TCGTGCTCCAAACATTCgactttttgacgtcacttttaaaattttgaacc
tCTTGTAGTAGGGAAAATATCGATTTTGAGTCAGAATTCTTGTGAAAGAc
ttcttttttcagaaaatcatcAAAGCGTAACTCATCGTGATACTGAATGA
ATATTCCTGGTTTTTTTGTGAAGTACTACCTATCATAATGGCAGGAATTa
tgtaacttaacaaaacacGTAAGACTTCTTACTGATATCGACTTTCATGG
TTCTTTTTAGAACAATAATATGGAGAGGATTAAAGGATTGTTGGCCGAAA
AAAAGGTTTGTACAGTTTTCACCACATTACACTATAGAAAGAAGTTTAAT
CAAGGAATTTGAGAGCAATGAAATTTTAGAAACTCTTAGATgatttttct
ctaaaatcatAATGCCTATAAAACctataaaatctcaaaaattctcaaaa
acatCCCTAAAAGAATTCCCACAACCTCtctgaaaatccaaaaaaattgt
cccataaaatctaaaaaaaataccaaatttgatcctaaaaaaaaacctat
aaaatctcaaaaattctcaaaaacccCTAAAAGAATTCCCAAAACCTCtc
agaaaatcccaaaaaaattgtcccataaaatctaaaaaatattccaaatt
taatcctaaaaaaaaatcttataaaatctcaaaaattctcaaaaacccCT
AAAAGAATTCCCAAAACCTCTcagaaaaccaaaaaaaattgtcccataaa
atctaaaaaatattccaaatttaatcctaaaaaaaaatcatataaaatct
caaaaattctcaaaaaaccCTAAAAGAATTCCCAAAATCTCtcagaaaat
ccataaaaattgtcccataagatttaaaaaaaattcaaaatttaatccta
aaaaaaatcttataaaatgtcaaaaactctcaaaaaccCCTAAAAGAATT
CCCAAAACCTCTCAGAAAATCTAAGATAAATTGCAACTTTGTACACCCAT
TGCAAGTGATTTCATATCGATCTGATTGTTTAACCATCAATAAGTCATTA
GCAAAGACTTAAcgtcagaaaaataaaaaattctacaCCAAAAGGTAAAA
TTGCACTGTTCCATATCTACCCCGAGATATTGACCAGGAATGTAGCTCTC
TGCCCCATTGTCCAAAGATTCCGAAAGACTTTTTTGTCACCTATATTATT
GAATTTTGCCAAAACCTTTTCCTTCAAGGTTAGCTCTTATCTTGGTAACT
AATAGCGCTGAAGAAAAAGTGTCTAGAATCATACTCGTAGCCATTATTTG
ATTTAGTAGGCACTGTGgttttaaaagcattttaacCCATGTTGTTAAAA
GTTTCCTGGTTTTAAACGCTGGTGGTACTGGCGATGCTGGTGGTGCTTGG
ATTTCGATTTCGATCCATTCGATGATCGTTTCTTGTTTTCGAGCCATCCA
AATCCATTTGATTATCGCATGCATTGTCATAACTTCTTTCAGATAATTCC
AAAGGAGCATGGGTTTGAGGAATATGGATTTGAGGAAGCTCGCCTTCAGA
AAGATGAGCTACGATGCCGGCACCAATACAATCACCAAGCACATTCACTA
CGGTTACGAGACGATCCAAAAACCAATCCACTGGAATGATAAGAGTTAAC
GATTCTTCAGGTAGATCAGCGGCTTGAAGAACCATCAATACGGGTATCCA
ATCATATTGTGGTACTGCACAAGCACTGATAGAGGCTATTGTAGCTGTTA
AACCAATAGCAATATATTGGCCAACGCTTAAGCTCTTACCTATTGATTGA
GCGATGAAGATTGCAGCGACAGCTTCAAAGAGCGCTGTACCATCCATATT
GATCGTGGTTCCGATTGGTAGAACGAGTCTGGTAACTCTTTTATCAATTC
CGTTCTTATCTTCAAGGCATTTAAAGGTTACAGGCATGGTAGCTGAGCTG
GAGCTCGTTCCAAACGCGGTCAAGAGCGCTTTGAATGTTCCTTTGATAAA
GGTGAACGGATTCCGTCTTGTCCATACAAAATAGGTCAACGGCAGAACCA
CCAAGGAGTGTAGAATCAAACCGGAAATGACAGTAGCCATGTAATAAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005765XLOC_005765Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010250-exon-sc0000104-1491911889:45750..45826TCONS_00010250-exon-sc0000104-1491911889:45750..45826Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:45750..45826TCONS_00010250-exon-sc0000104-1510915933:45750..45826Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:45750..45826TCONS_00010250-exon-sc0000104-1575043694:45750..45826Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1491911889:47276..47394TCONS_00010250-exon-sc0000104-1491911889:47276..47394Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:47276..47394TCONS_00010250-exon-sc0000104-1510915933:47276..47394Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:47276..47394TCONS_00010250-exon-sc0000104-1575043694:47276..47394Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1491911889:50170..50284TCONS_00010250-exon-sc0000104-1491911889:50170..50284Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:50170..50284TCONS_00010250-exon-sc0000104-1510915933:50170..50284Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:50170..50284TCONS_00010250-exon-sc0000104-1575043694:50170..50284Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1491911889:51415..51625TCONS_00010250-exon-sc0000104-1491911889:51415..51625Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:51415..51625TCONS_00010250-exon-sc0000104-1510915933:51415..51625Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:51415..51625TCONS_00010250-exon-sc0000104-1575043694:51415..51625Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1491911889:52494..52857TCONS_00010250-exon-sc0000104-1491911889:52494..52857Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:52494..52857TCONS_00010250-exon-sc0000104-1510915933:52494..52857Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:52494..52857TCONS_00010250-exon-sc0000104-1575043694:52494..52857Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1491911889:54153..54272TCONS_00010250-exon-sc0000104-1491911889:54153..54272Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:54153..54272TCONS_00010250-exon-sc0000104-1510915933:54153..54272Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:54153..54272TCONS_00010250-exon-sc0000104-1575043694:54153..54272Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1491911889:55160..55204TCONS_00010250-exon-sc0000104-1491911889:55160..55204Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:55160..55204TCONS_00010250-exon-sc0000104-1510915933:55160..55204Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:55160..55204TCONS_00010250-exon-sc0000104-1575043694:55160..55204Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1491911889:56392..56999TCONS_00010250-exon-sc0000104-1491911889:56392..56999Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1510915933:56392..56999TCONS_00010250-exon-sc0000104-1510915933:56392..56999Clytia hemisphaericaexon
TCONS_00010250-exon-sc0000104-1575043694:56392..56999TCONS_00010250-exon-sc0000104-1575043694:56392..56999Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:45750..56999 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.164233	0.113935	0.167551	0.253577	1.60474	0.664591	0.289741	0.795823	0.230155	0.515945	0	0.108963	8.49311	5.94914	35.6388	52.2579	5.17351	6.04266	0.950876	0.952661	0.656797	1.10708	1.96519	1.37342	0.185454	0.399201	0.0653357	0.0611544	1.54454	2.28092
Blast
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BLAST of TCONS_00010250 vs. Swiss-Prot (Human)
Match: EAA1 (Excitatory amino acid transporter 1 OS=Homo sapiens GN=SLC1A3 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 4.825e-71
Identity = 117/201 (58.21%), Postives = 149/201 (74.13%), Query Frame = -2 
Query: 1056 AYYMATVISGLILHSLVVLPLTYFVWTRRNPFTFIKGTFKALLTAFGTSSSSATMPVTFKCLEDKNGIDKRVTRLVLPIGTTINMDGTALFEAVAAIFIAQSIGKSLSVGQYIAIGLTATIASISACAVPQYDWIPVLMVLQAADLPEESLTLIIPVDWFLDRLVTVVNVLGDCIGAGIVAHLSEGELPQIHIPQTHAPLE 1658
            A Y  TVI GL++H+++VLPL YF+ TR+NP+ FI G  +AL+TA GTSSSSAT+P+TFKCLE+ NG+DKRVTR VLP+G TINMDGTAL+EA+AAIFIAQ     L+ GQ I I +TAT ASI A  +PQ   + +++VL +  LP + +TLII VDWFLDRL T  NVLGD +GAGIV HLS  EL    +   ++ +E
Sbjct:  315 AMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIE 515
The following BLAST results are available for this feature:
BLAST of TCONS_00010250 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EAA14.825e-7158.21Excitatory amino acid transporter 1 OS=Homo sapien... [more]
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