TCONS_00010269 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010269
Unique NameTCONS_00010269
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1222

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010269 ID=TCONS_00010269|Name=TCONS_00010269|organism=Clytia hemisphaerica|type=transcript|length=1222bp
aaaaaataccAATAGGATCGCTTCATTTAAACTTGTGAAATAGAAAGCTA
GAATTTggtaaaaacatttgaaattattgaaaaaaattatatagaGGATT
GAAGATCTCATACGATGTCCGATTTGACGATTCTATTCAGCATGGAGCAG
TGTTAATGGGAAATAGGCAATTCTTTAACCCTAATCGCATTCTCATTAGT
TTACATATTGTTTGAAGTCTGGTATACACGATGATGGACAGGACAATAGT
TTATACGGCATTTGTTGCATCATTCATAGTATTACCTGTCATCAAAGGTC
AAAACGGATCTAAGAATAATTTAGAATCAGAACCGGATGACCAGAAAATA
TGCAACTATAAgtttttcttcacaaatttcGTTGAAAAAGAAACACTTCC
AAATCAACGAGACATTAAAACATTACTCTCCGGTTCTTGCAACATTAACA
ATACTTGTGGAATTCATCCTGCTGACGATTATCGTGGTTCACCATACACA
TATTTATCGTATGGTGAGAAACCAAAGGATAAAATCACCACTGGAATATG
GAATATGGATTCCTTAGATTTAGAAGGATGTTGGGGTTTTATATTTCTGG
TCAAAGATTCTAAAGAAAATGTTGTGATGCATAAATATTATAACTTCAAA
GATCTCAACAGGaATATAACTTTGgaatcattttcaaaagaatttatcaA
ATTCAATGCTTCGGCTTATGGAGAAGTTTATACAGCCACTGGAATTCTTT
TACCAACATCATCATTTACTGTTCAAAAATCAACACTTTACCTACCAAAA
AACGAATGTGAGACAACAGCATGGCATATGGCGGTCAAATATTATTGGGC
AATGTTTGATAAGCAACCAAAACAATGCACTTTTTACAATTCGAATGCAA
TGTCCAACATAGCATCTGATTATTGTCAACAATATAAATATCCATCAGAT
GAATACATTACAAAGAACATGGCAAGTCAACTCCAAGAAAAACAATGTCA
TATCAGTGTTATGCCGCCACCATCATCAAACGATTCACACAAAGGCCAAC
AAATAACTGACAAGTCTGTAATTTACACAGCCGTTTTTTCATGTATTGGA
TTTATACTTTTAGTACTTACTATTGTTGGGATAGTTATGTTTTGCAAACG
ATATAAAACGGTTATTACTGTAAATGCAAAAAACAGACCGAAAGTCTTTG
ATAACATTTAGTGCGAAAGCAN
Run BLAST on NCBI

protein sequence of TCONS_00010269-protein

>TCONS_00010269-protein ID=TCONS_00010269-protein|Name=TCONS_00010269-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MMDRTIVYTAFVASFIVLPVIKGQNGSKNNLESEPDDQKICNYKFFFTNF
VEKETLPNQRDIKTLLSGSCNINNTCGIHPADDYRGSPYTYLSYGEKPKD
KITTGIWNMDSLDLEGCWGFIFLVKDSKENVVMHKYYNFKDLNRNITLES
FSKEFIKFNASAYGEVYTATGILLPTSSFTVQKSTLYLPKNECETTAWHM
AVKYYWAMFDKQPKQCTFYNSNAMSNIASDYCQQYKYPSDEYITKNMASQ
LQEKQCHISVMPPPSSNDSHKGQQITDKSVIYTAVFSCIGFILLVLTIVG
IVMFCKRYKTVITVNAKNRPKVFDNI
Run BLAST on NCBI

transcript from alignment at sc0000104:563121..569223+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010269 ID=TCONS_00010269|Name=TCONS_00010269|organism=Clytia hemisphaerica|type=transcript|length=6103bp|location=Sequence derived from alignment at sc0000104:563121..569223+ (Clytia hemisphaerica)
aaaaaataccAATAGGATCGCTTCATTTAAACTTGTGAAATAGAAAGCTA
GAATTTggtaaaaacatttgaaattattgaaaaaaattatatagaGGATT
GAAGATCTCATACGATGTCCGATTTGACGATTCTATTCAGCATGGAGCAG
TGTTAATGGGAAATAGGCAATTCTTTAACCCTAATCGCATTCTCATTAGT
TTACATATTGTTTGAAGTCTGGTATACACGATGATGGACAGGACAATAGT
TTATACGGCATTTGTTGCATCATTCATAGTATTACCTGTAAGTGGCCATG
TTTACACCCCCTTCCCAAAGACCCGTTTGGATCTTTTCAGCCAGTGAGGG
TAAAAATAGCGGACTGAAACTTCATAGGGATTGACATTTCCCTGTTTTTT
AAAGCACCCATTTTTTAGCAATGACAATGCCTGGGTCGTAATTTTGGCGA
AACGAGAGAATTGATCAATCCTGCTTCAGCTTTGCCTCAGTCAGTCTTCT
CAACTGttatggaagaaaaaaattgcagtttttatgtAATCTGAATCGCA
AAATTAAGGAGGATCAAATTTTTTGGAGGATAGAAGCAGTTCAGACTGAA
TGGAATTGCATATATGCGTGTAGACTCTAAAGGACTGATTAAATAGCAGT
TTAAAAAAGAATATTATAGGATGTCCTTCAAAAATATATCTCTTGCTTTT
TTAGGTCATCAAAGGTCAAAACGGATCTAAGAATAATTTAGAATCAGAAC
CGGGTAAGTCAACATAGGGTATGTCAACAAAGTATGCGAGATCATTGATG
TTCAGATTATTCTAATTTTGTTAAATGCTAGAAAATTGGTTGTGATTCGT
CTATAATTGGGCTTATTGGGCTATTTCATTAAAAATCCAAACAAGAGGGA
GCGGGTGGTAGACCTTTTCAAGTTACAAAAAAAGGTTCTTGGAAATGTAt
gaataccccctggaaaatggtaaAGAAACCCTTCGAaacattcttttcat
accttaaaatgACGGGGGACGAACTAGAATCAGTCTggaattttagaata
actttttaccctctgggaaaatgaaaaaaaaataccccGAAAATTCTTCT
CGGATTACTCCCTGGAGATTTTTGGCCACACCTCTGTATATAAAATACAA
AGTAAGAACCGATTTTTCTTCGTTGAATTTTCTAGATGACCAGAAAATAT
GCAACTATAAgtttttcttcacaaatttcGTTGAAAAAGGTATATTACAC
ATTCTTAAATTATAATTCAGTTCTTAATGTAATCGACCCTAAACCAGAAA
GATATTATATAAGAGTTACATAAGAGTAgtctttcttatttttaccatgg
CCAGTCTGTCACTAGCACTGCAGGCACAATAATTCTTTTGACGATCGCAT
AATAAGGGCCTGGaaggtgttcattcaaaagctATTTCAAGTTGACTTAA
AATAGGTTAACTAAAGCACTTTCACCCCCTTCACCTGACAGTTAAATCTT
TATCCCTTAGCCGTAAAATAGTTTCCATTTTATTAGCTATTATTTTGCAC
acctctgtgtcacagaccctcttggaccccagccccactggcaAAATTTT
GATCCCtgatgggaaaataccctggaactTCAGCCCCACCAGTAAATTTA
CACTCCCATTcgaaaatgtctaaaaattgcactccaaaaccatcccaact
ggattttttaaccttggaacaataaaatttctatccccattgggatttta
ataGGGATTTatatccccactgaaaaaaaagttccactggggctgtgaga
caggggtgtttttgcATTCTCATGACATGTCAAGAGAGACTAGTATCATT
TTCCTGTCCTCCTTTCCATAACTAGAAACACTTCCAAATCAACGAGACAT
TAAAACATTACTCTCCGGTTCTTGCAACATTAACAATACTTGTGGAATTC
ATCCTGCTGACGATTATCGTGGTTCACCATACACATATTTATCGTATGGT
GAGAAACCAAAGGATAAAATCACCACTGGAATATGGAATATGGATTCCTT
AGATTTAGAAGGTTAGTGAGCACCCTTGTTTCCCTTCAAGTTCAACAACG
TTCATTTGACGTAACGACCGTATTGCCAAGCAAGATAGGGCATTCGGCTA
CAGAaaacaaaatggaaaatttttcccattttcaccctgaaaagtggcta
AAATAAGTAGacaaaaaatttgattattttataatttataccctgaaatt
tccaccctgtcaaaaataaacatcttgaaaattagtaaatttaagaccct
gtcagatatcttcagagcctaaaaaagagacccaattttgcctaagtgct
cCCGGGGTCGCGTCATACCAAAGACTCTGTacttattactaaaaaaagGT
ACTTTTTGCCTCTCCTGCTTGATATTCAGCAATTAAAAGAAGGATTAAAT
GTaaatggagcaatccagggagaaaagAGTAGCAGcgttcaacgtttttc
taacatttacaacgtccatataacgttagaaaaacgttgaaacaacgttg
tgtgccagctgggattacTCTCGATCAGCAATGTGTAATATCTTGTATTA
AGACTACCAAGGAGCTATAGTTACATATCTTAAATTATTTCTGATTGTCG
AAATTGGTGATTTCATCTTGTAGGATGTTGGGGTTATATGNGTTACCTAT
CTTAAATTATTTCTGATTGTCGAAATTCATGATTTCATCTTGTAGGATGT
TGGGGTTTTATATTTCTGGTCAAAGATTCTAAAGAAAATGTTGTGATGCA
TAAATATTATAACTTCAAAGATCTCAACAGGGTGAGCCCATGTGTATAGT
TTACAAGAATAATTCATGAGAATTTATAAAGACAAAAACGTTTTCTAGTT
TGAATTACAGACCTCTGTAGAGATTACGGGCCTAGTAAAGCATTCCAGAA
ATCTAAATAAATTTCCAGTCTAGTTATGAGCCCCCTCTCTAACAGTTAGC
GTGATGTCGTGTTAGAGACATGATAACTAGAAGTAattttcgtgattgcg
tgatcgagGGTCAAAATGTGAAcgtgaattgaaaaactttttagtCTTGG
CTTATTTTAAAGGGATGTGCTATTATCTAAGCTTTTGGCGATTGACAATA
CGAAATCAGAGAAGATCGTGATCAGTGTTACCCCTATTGGAGCATCAGTT
AAAACattcgaatatttttttatataaggaatacgtttataaggaacttg
aggctgaataTGGTCCAAAAATTAAGGAATTGATAAGGAACTGTTCAGGC
TCAGAGTTTAAGGAACATTAAGGATTAAACTTGAACTTACCGACATATAA
AATAACCTAAGATGAAATACCGCCTAAGTAAATAAGGAATTCGGTAAGGA
ACTttcaggctgaaattctctggaaTAATAAGGAACTTCAGGCTCGGAGC
TAGCAGAAAGGTTCCTcatgaaaaaacgtgtactggtAATTTggtattta
tgtttttttagaATATAACTTTGgaatcattttcaaaagaatttatcaAA
TTCAATGCTTCGGCTTATGGAGAAGTTTATACAGCCACTGGAATTCTTTT
ACCAACATCATCATTTACTGTTCAAAAATCAACACTTTACCTACCAAAAA
GTAAGGTGAATCTGAATCTGATGGTATCCTAGCTAGTTCCGATGtttatt
ttttcctctttctgaccaatcttgctccacatccgtgtcaatccaatttg
aaaaaacttctgAATCAAAATTGACacaaacaatatcactcttgtttaaa
aacaaaacctttaaaactctTTTCTATTTCAGACGAATGTGAGACAACAG
CATGGCATATGGCGGTCAAATGTAAGTATTTTTAAAACCGGTTAGATCCC
ATCCTAACGTTAATACTGAAAATCGTCCCTGGTGATAAAAATACCCTGAA
GATATAATAATTTTgtgaccctttcagagactccATAGCTAATTTATCgg
ttttgtacccctttgagagacttttgagggttTAAAAAAAGAGATCATTA
TGGCTTGCACACACCGACACCCATTTTGCCCAAGTAACCCCCGGGCTTTC
CTTTTATTCTTGAGTTCTCGAGTTCTTAACGGTAGACTTCAACGTTagct
ttttatttcaaaattggacaaAACCTAATACAATTATAAGCCCTACAACA
GGCATTATATTCTTTAACCTGACTTTCACTCATGATATGATTTATATATG
ACGAAAGCACCCAAAATAGCCCAGaagtttaaaattcaaaatattagtGG
CAAAGTTTTTGGGTACTTCCTTACCTATATAACATTACttcatgaatatc
acgaattcCTGGATCTAGTAAAGTACatacattttatttttgctCCTTTC
ATTTTATAGATTATTGGGCAATGTTTGATAAGCAACCAAAACAATGCACT
TTTTACAGTAAGTCTGTCTGACTATGAAATGAGATATACAGTTGACTAAC
GTACTAATTTGAAATTGAACGGGAataatcttatttgttcgaattacaga
gagattcaaattatagaaaatattttaagagtctccttgacggggatttg
gaattagttcgaattatagaaaaggTTTGAATAACAGAACTTCGACATTC
TACTGTATTCAAATCAGATACTGAAATAGAAGCTCCTCATGCTATCTCCA
AGGGATAGGGGTGCTTTTACGAAGTAAATGTGAGGTACGTGCATGCCAGG
TCTTCGAACCCTGACCCTTATTAGAGTTTACAGCCATCACGGCggttaat
gaaaaaaaaatagtgGTGGTAGAGCTTGGAACACCTCTACCATTGACTTC
cgagcccgaagggctagaatcgagaCTCATGGATGGGATAAAGGTAATTA
TTTCCCTTCCAGAACGCCCACGCgttgtttttacacaaacgctggattga
aagtaaaatctatccctaaatttcaaaagatgcaatcctcaaaaacagaa
aaaccgctagatacaatccgtcgttatgattgcggcgcgttctaggcacg
ctctggatgggaaataagtggcttcactttttcttgcctgggaaaggtta
gagagtctactctagcccttcgggatttaATTTCAATGACTTCTACCATT
GCTTACTCCATCCCAGGCTAAACATATTTTCTAATTTATCCCACCTCTTA
GATtcggcttttccagaaaaaaaccctaTACCCCCttttgaggaggtcca
tttccgttccaaggttTTGGAACTTAAGGTACTTTTTCTGTAAGGTTTAA
TATGTGGCGAAactccatagggagatacaaaaatctgtcgaaaataactg
gaattccatgggggtaggcttttaaatcctactaaaattcagaattccag
aggggtttaagcctgaaattgcccggaattccagggggttgcagcatttc
cagccacaaaatgatggacctcctcaacaaggggtatacggtttttttct
ggaaaagcccattactCCCTTTTTAGTGaacttgtgtagacgataggatt
cataggcggttttagaccgcGTCAAACTTTCaaaggaagagatttgtaat
tgtaatttaattttattttaacgaACGTTGCACTCCCTCCCACGTGcgct
tgctctattgtcttaaatccgccagtggGATCGACTAGACCTCATTCTGC
TAAATGCCATTTTCACTCTTCTTTGGATCTCCttgaaaacctgaaaaacc
TTTTTACGTTCTCTTATAGATTCGAATGCAATGTCCAACATAGCATCTGA
TTATTGTCAACAATATAAATATCCATCAGATGAATACATTACAAAGAACA
TGGCAAGTCAACTCCAAGAAAAACAATGTCATATCAGTGTTATGCCGCCA
CCATCATCAAACGATTCACACAAAGGCCAACAAATAACTGACAAGTCTGT
AATTTACACAGCCGTTTTTTCATGTATTGGATTTATACTTTTAGTACTTA
CTATTGTTGGGATAGTTATGTTTTGCAAACGATATAAAACGGTTATTACT
GTAAATGCAAAAAACAGACCGAAAGTCTTTGATAACATTTAGTGCGAAAG
CAN

Coding sequence (CDS) from alignment at sc0000104:563121..569223+

>TCONS_00010269 ID=TCONS_00010269|Name=TCONS_00010269|organism=Clytia hemisphaerica|type=CDS|length=8829bp|location=Sequence derived from alignment at sc0000104:563121..569223+ (Clytia hemisphaerica)
ATGATGGACAGGACAATAGTTTATACGGCATTTGTTGCATCATTCATAGT
ATTACCTGTCATCAAAGGTCAAAACGGATCTAAGAATAATTTAGAATCAG
AACCGGATGACCAGAAAATATGCAACTATAAgtttttcttcacaaatttc
GTTGAAAAAGAAACACTTCCAAATCAACGAGACATTAAAACATTACTCTC
CGGTTCTTGCAACATTAACAATACTTGTGGAATTCATCCTGCTGACGATT
ATCGTGGTTCACCATACACATATTTATCGTATGGTGAGAAACCAAAGGAT
AAAATCACCACTGGAATATGGAATATGGATTCCTTAGATTTAGAAGGATG
TTGGGGTTTTATATTTCTGGTCAAAGATTCTAAAGAAAATGTTGTGATGC
ATAAATATTATAACTTCAAAGATCTCAACAGGaATATAACTTTGgaatca
ttttcaaaagaatttatcaAATTCAATGCTTCGGCTTATGGAGAAGTTTA
TACAGCCACTGGAATTCTTTTACCAACATCATCATTTACTGTTCAAAAAT
CAACACTTTACCTACCAAAAAACGAATGTGAGACAACAGCATGGCATATG
GCGGTCAAATATTATTGGGCAATGTTTGATAAGCAACCAAAACAATGCAC
TTTTTACAATTCGAATGCAATGTCCAACATAGCATCTGATTATTGTCAAC
AATATAAATATCCATCAGATGAATACATTACAAAGAACATGGCAAGTCAA
CTCCAAGAAAAACAATGTCATATCAGTGTTATGCCGCCACCATCATCAAA
CGATTCACACAAAGGCCAACAAATAACTGACAAGTCTGTAATTTACACAG
CCGTTTTTTCATGTATTGGATTTATACTTTTAGTACTTACTATTGTTGGG
ATAGTTATGTTTTGCAAACGATATAAAACGGTTATTACTGTAAATGCAAA
AAACAGACCGAAAGTCTTTGATAACATTTAGATGATGGACAGGACAATAG
TTTATACGGCATTTGTTGCATCATTCATAGTATTACCTGTCATCAAAGGT
CAAAACGGATCTAAGAATAATTTAGAATCAGAACCGGATGACCAGAAAAT
ATGCAACTATAAgtttttcttcacaaatttcGTTGAAAAAGAAACACTTC
CAAATCAACGAGACATTAAAACATTACTCTCCGGTTCTTGCAACATTAAC
AATACTTGTGGAATTCATCCTGCTGACGATTATCGTGGTTCACCATACAC
ATATTTATCGTATGGTGAGAAACCAAAGGATAAAATCACCACTGGAATAT
GGAATATGGATTCCTTAGATTTAGAAGGATGTTGGGGTTTTATATTTCTG
GTCAAAGATTCTAAAGAAAATGTTGTGATGCATAAATATTATAACTTCAA
AGATCTCAACAGGaATATAACTTTGgaatcattttcaaaagaatttatca
AATTCAATGCTTCGGCTTATGGAGAAGTTTATACAGCCACTGGAATTCTT
TTACCAACATCATCATTTACTGTTCAAAAATCAACACTTTACCTACCAAA
AAACGAATGTGAGACAACAGCATGGCATATGGCGGTCAAATATTATTGGG
CAATGTTTGATAAGCAACCAAAACAATGCACTTTTTACAATTCGAATGCA
ATGTCCAACATAGCATCTGATTATTGTCAACAATATAAATATCCATCAGA
TGAATACATTACAAAGAACATGGCAAGTCAACTCCAAGAAAAACAATGTC
ATATCAGTGTTATGCCGCCACCATCATCAAACGATTCACACAAAGGCCAA
CAAATAACTGACAAGTCTGTAATTTACACAGCCGTTTTTTCATGTATTGG
ATTTATACTTTTAGTACTTACTATTGTTGGGATAGTTATGTTTTGCAAAC
GATATAAAACGGTTATTACTGTAAATGCAAAAAACAGACCGAAAGTCTTT
GATAACATTTAGATGATGGACAGGACAATAGTTTATACGGCATTTGTTGC
ATCATTCATAGTATTACCTGTCATCAAAGGTCAAAACGGATCTAAGAATA
ATTTAGAATCAGAACCGGATGACCAGAAAATATGCAACTATAAgtttttc
ttcacaaatttcGTTGAAAAAGAAACACTTCCAAATCAACGAGACATTAA
AACATTACTCTCCGGTTCTTGCAACATTAACAATACTTGTGGAATTCATC
CTGCTGACGATTATCGTGGTTCACCATACACATATTTATCGTATGGTGAG
AAACCAAAGGATAAAATCACCACTGGAATATGGAATATGGATTCCTTAGA
TTTAGAAGGATGTTGGGGTTTTATATTTCTGGTCAAAGATTCTAAAGAAA
ATGTTGTGATGCATAAATATTATAACTTCAAAGATCTCAACAGGaATATA
ACTTTGgaatcattttcaaaagaatttatcaAATTCAATGCTTCGGCTTA
TGGAGAAGTTTATACAGCCACTGGAATTCTTTTACCAACATCATCATTTA
CTGTTCAAAAATCAACACTTTACCTACCAAAAAACGAATGTGAGACAACA
GCATGGCATATGGCGGTCAAATATTATTGGGCAATGTTTGATAAGCAACC
AAAACAATGCACTTTTTACAATTCGAATGCAATGTCCAACATAGCATCTG
ATTATTGTCAACAATATAAATATCCATCAGATGAATACATTACAAAGAAC
ATGGCAAGTCAACTCCAAGAAAAACAATGTCATATCAGTGTTATGCCGCC
ACCATCATCAAACGATTCACACAAAGGCCAACAAATAACTGACAAGTCTG
TAATTTACACAGCCGTTTTTTCATGTATTGGATTTATACTTTTAGTACTT
ACTATTGTTGGGATAGTTATGTTTTGCAAACGATATAAAACGGTTATTAC
TGTAAATGCAAAAAACAGACCGAAAGTCTTTGATAACATTTAGATGATGG
ACAGGACAATAGTTTATACGGCATTTGTTGCATCATTCATAGTATTACCT
GTCATCAAAGGTCAAAACGGATCTAAGAATAATTTAGAATCAGAACCGGA
TGACCAGAAAATATGCAACTATAAgtttttcttcacaaatttcGTTGAAA
AAGAAACACTTCCAAATCAACGAGACATTAAAACATTACTCTCCGGTTCT
TGCAACATTAACAATACTTGTGGAATTCATCCTGCTGACGATTATCGTGG
TTCACCATACACATATTTATCGTATGGTGAGAAACCAAAGGATAAAATCA
CCACTGGAATATGGAATATGGATTCCTTAGATTTAGAAGGATGTTGGGGT
TTTATATTTCTGGTCAAAGATTCTAAAGAAAATGTTGTGATGCATAAATA
TTATAACTTCAAAGATCTCAACAGGaATATAACTTTGgaatcattttcaa
aagaatttatcaAATTCAATGCTTCGGCTTATGGAGAAGTTTATACAGCC
ACTGGAATTCTTTTACCAACATCATCATTTACTGTTCAAAAATCAACACT
TTACCTACCAAAAAACGAATGTGAGACAACAGCATGGCATATGGCGGTCA
AATATTATTGGGCAATGTTTGATAAGCAACCAAAACAATGCACTTTTTAC
AATTCGAATGCAATGTCCAACATAGCATCTGATTATTGTCAACAATATAA
ATATCCATCAGATGAATACATTACAAAGAACATGGCAAGTCAACTCCAAG
AAAAACAATGTCATATCAGTGTTATGCCGCCACCATCATCAAACGATTCA
CACAAAGGCCAACAAATAACTGACAAGTCTGTAATTTACACAGCCGTTTT
TTCATGTATTGGATTTATACTTTTAGTACTTACTATTGTTGGGATAGTTA
TGTTTTGCAAACGATATAAAACGGTTATTACTGTAAATGCAAAAAACAGA
CCGAAAGTCTTTGATAACATTTAGATGATGGACAGGACAATAGTTTATAC
GGCATTTGTTGCATCATTCATAGTATTACCTGTCATCAAAGGTCAAAACG
GATCTAAGAATAATTTAGAATCAGAACCGGATGACCAGAAAATATGCAAC
TATAAgtttttcttcacaaatttcGTTGAAAAAGAAACACTTCCAAATCA
ACGAGACATTAAAACATTACTCTCCGGTTCTTGCAACATTAACAATACTT
GTGGAATTCATCCTGCTGACGATTATCGTGGTTCACCATACACATATTTA
TCGTATGGTGAGAAACCAAAGGATAAAATCACCACTGGAATATGGAATAT
GGATTCCTTAGATTTAGAAGGATGTTGGGGTTTTATATTTCTGGTCAAAG
ATTCTAAAGAAAATGTTGTGATGCATAAATATTATAACTTCAAAGATCTC
AACAGGaATATAACTTTGgaatcattttcaaaagaatttatcaAATTCAA
TGCTTCGGCTTATGGAGAAGTTTATACAGCCACTGGAATTCTTTTACCAA
CATCATCATTTACTGTTCAAAAATCAACACTTTACCTACCAAAAAACGAA
TGTGAGACAACAGCATGGCATATGGCGGTCAAATATTATTGGGCAATGTT
TGATAAGCAACCAAAACAATGCACTTTTTACAATTCGAATGCAATGTCCA
ACATAGCATCTGATTATTGTCAACAATATAAATATCCATCAGATGAATAC
ATTACAAAGAACATGGCAAGTCAACTCCAAGAAAAACAATGTCATATCAG
TGTTATGCCGCCACCATCATCAAACGATTCACACAAAGGCCAACAAATAA
CTGACAAGTCTGTAATTTACACAGCCGTTTTTTCATGTATTGGATTTATA
CTTTTAGTACTTACTATTGTTGGGATAGTTATGTTTTGCAAACGATATAA
AACGGTTATTACTGTAAATGCAAAAAACAGACCGAAAGTCTTTGATAACA
TTTAGATGATGGACAGGACAATAGTTTATACGGCATTTGTTGCATCATTC
ATAGTATTACCTGTCATCAAAGGTCAAAACGGATCTAAGAATAATTTAGA
ATCAGAACCGGATGACCAGAAAATATGCAACTATAAgtttttcttcacaa
atttcGTTGAAAAAGAAACACTTCCAAATCAACGAGACATTAAAACATTA
CTCTCCGGTTCTTGCAACATTAACAATACTTGTGGAATTCATCCTGCTGA
CGATTATCGTGGTTCACCATACACATATTTATCGTATGGTGAGAAACCAA
AGGATAAAATCACCACTGGAATATGGAATATGGATTCCTTAGATTTAGAA
GGATGTTGGGGTTTTATATTTCTGGTCAAAGATTCTAAAGAAAATGTTGT
GATGCATAAATATTATAACTTCAAAGATCTCAACAGGaATATAACTTTGg
aatcattttcaaaagaatttatcaAATTCAATGCTTCGGCTTATGGAGAA
GTTTATACAGCCACTGGAATTCTTTTACCAACATCATCATTTACTGTTCA
AAAATCAACACTTTACCTACCAAAAAACGAATGTGAGACAACAGCATGGC
ATATGGCGGTCAAATATTATTGGGCAATGTTTGATAAGCAACCAAAACAA
TGCACTTTTTACAATTCGAATGCAATGTCCAACATAGCATCTGATTATTG
TCAACAATATAAATATCCATCAGATGAATACATTACAAAGAACATGGCAA
GTCAACTCCAAGAAAAACAATGTCATATCAGTGTTATGCCGCCACCATCA
TCAAACGATTCACACAAAGGCCAACAAATAACTGACAAGTCTGTAATTTA
CACAGCCGTTTTTTCATGTATTGGATTTATACTTTTAGTACTTACTATTG
TTGGGATAGTTATGTTTTGCAAACGATATAAAACGGTTATTACTGTAAAT
GCAAAAAACAGACCGAAAGTCTTTGATAACATTTAGATGATGGACAGGAC
AATAGTTTATACGGCATTTGTTGCATCATTCATAGTATTACCTGTCATCA
AAGGTCAAAACGGATCTAAGAATAATTTAGAATCAGAACCGGATGACCAG
AAAATATGCAACTATAAgtttttcttcacaaatttcGTTGAAAAAGAAAC
ACTTCCAAATCAACGAGACATTAAAACATTACTCTCCGGTTCTTGCAACA
TTAACAATACTTGTGGAATTCATCCTGCTGACGATTATCGTGGTTCACCA
TACACATATTTATCGTATGGTGAGAAACCAAAGGATAAAATCACCACTGG
AATATGGAATATGGATTCCTTAGATTTAGAAGGATGTTGGGGTTTTATAT
TTCTGGTCAAAGATTCTAAAGAAAATGTTGTGATGCATAAATATTATAAC
TTCAAAGATCTCAACAGGaATATAACTTTGgaatcattttcaaaagaatt
tatcaAATTCAATGCTTCGGCTTATGGAGAAGTTTATACAGCCACTGGAA
TTCTTTTACCAACATCATCATTTACTGTTCAAAAATCAACACTTTACCTA
CCAAAAAACGAATGTGAGACAACAGCATGGCATATGGCGGTCAAATATTA
TTGGGCAATGTTTGATAAGCAACCAAAACAATGCACTTTTTACAATTCGA
ATGCAATGTCCAACATAGCATCTGATTATTGTCAACAATATAAATATCCA
TCAGATGAATACATTACAAAGAACATGGCAAGTCAACTCCAAGAAAAACA
ATGTCATATCAGTGTTATGCCGCCACCATCATCAAACGATTCACACAAAG
GCCAACAAATAACTGACAAGTCTGTAATTTACACAGCCGTTTTTTCATGT
ATTGGATTTATACTTTTAGTACTTACTATTGTTGGGATAGTTATGTTTTG
CAAACGATATAAAACGGTTATTACTGTAAATGCAAAAAACAGACCGAAAG
TCTTTGATAACATTTAGATGATGGACAGGACAATAGTTTATACGGCATTT
GTTGCATCATTCATAGTATTACCTGTCATCAAAGGTCAAAACGGATCTAA
GAATAATTTAGAATCAGAACCGGATGACCAGAAAATATGCAACTATAAgt
ttttcttcacaaatttcGTTGAAAAAGAAACACTTCCAAATCAACGAGAC
ATTAAAACATTACTCTCCGGTTCTTGCAACATTAACAATACTTGTGGAAT
TCATCCTGCTGACGATTATCGTGGTTCACCATACACATATTTATCGTATG
GTGAGAAACCAAAGGATAAAATCACCACTGGAATATGGAATATGGATTCC
TTAGATTTAGAAGGATGTTGGGGTTTTATATTTCTGGTCAAAGATTCTAA
AGAAAATGTTGTGATGCATAAATATTATAACTTCAAAGATCTCAACAGGa
ATATAACTTTGgaatcattttcaaaagaatttatcaAATTCAATGCTTCG
GCTTATGGAGAAGTTTATACAGCCACTGGAATTCTTTTACCAACATCATC
ATTTACTGTTCAAAAATCAACACTTTACCTACCAAAAAACGAATGTGAGA
CAACAGCATGGCATATGGCGGTCAAATATTATTGGGCAATGTTTGATAAG
CAACCAAAACAATGCACTTTTTACAATTCGAATGCAATGTCCAACATAGC
ATCTGATTATTGTCAACAATATAAATATCCATCAGATGAATACATTACAA
AGAACATGGCAAGTCAACTCCAAGAAAAACAATGTCATATCAGTGTTATG
CCGCCACCATCATCAAACGATTCACACAAAGGCCAACAAATAACTGACAA
GTCTGTAATTTACACAGCCGTTTTTTCATGTATTGGATTTATACTTTTAG
TACTTACTATTGTTGGGATAGTTATGTTTTGCAAACGATATAAAACGGTT
ATTACTGTAAATGCAAAAAACAGACCGAAAGTCTTTGATAACATTTAGAT
GATGGACAGGACAATAGTTTATACGGCATTTGTTGCATCATTCATAGTAT
TACCTGTCATCAAAGGTCAAAACGGATCTAAGAATAATTTAGAATCAGAA
CCGGATGACCAGAAAATATGCAACTATAAgtttttcttcacaaatttcGT
TGAAAAAGAAACACTTCCAAATCAACGAGACATTAAAACATTACTCTCCG
GTTCTTGCAACATTAACAATACTTGTGGAATTCATCCTGCTGACGATTAT
CGTGGTTCACCATACACATATTTATCGTATGGTGAGAAACCAAAGGATAA
AATCACCACTGGAATATGGAATATGGATTCCTTAGATTTAGAAGGATGTT
GGGGTTTTATATTTCTGGTCAAAGATTCTAAAGAAAATGTTGTGATGCAT
AAATATTATAACTTCAAAGATCTCAACAGGaATATAACTTTGgaatcatt
ttcaaaagaatttatcaAATTCAATGCTTCGGCTTATGGAGAAGTTTATA
CAGCCACTGGAATTCTTTTACCAACATCATCATTTACTGTTCAAAAATCA
ACACTTTACCTACCAAAAAACGAATGTGAGACAACAGCATGGCATATGGC
GGTCAAATATTATTGGGCAATGTTTGATAAGCAACCAAAACAATGCACTT
TTTACAATTCGAATGCAATGTCCAACATAGCATCTGATTATTGTCAACAA
TATAAATATCCATCAGATGAATACATTACAAAGAACATGGCAAGTCAACT
CCAAGAAAAACAATGTCATATCAGTGTTATGCCGCCACCATCATCAAACG
ATTCACACAAAGGCCAACAAATAACTGACAAGTCTGTAATTTACACAGCC
GTTTTTTCATGTATTGGATTTATACTTTTAGTACTTACTATTGTTGGGAT
AGTTATGTTTTGCAAACGATATAAAACGGTTATTACTGTAAATGCAAAAA
ACAGACCGAAAGTCTTTGATAACATTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005775XLOC_005775Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010269-exon-sc0000104-1491911889:563121..563407TCONS_00010269-exon-sc0000104-1491911889:563121..563407Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:563121..563407TCONS_00010269-exon-sc0000104-1510915933:563121..563407Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:563121..563407TCONS_00010269-exon-sc0000104-1575043694:563121..563407Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:563825..563873TCONS_00010269-exon-sc0000104-1491911889:563825..563873Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:563825..563873TCONS_00010269-exon-sc0000104-1510915933:563825..563873Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:563825..563873TCONS_00010269-exon-sc0000104-1575043694:563825..563873Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:564306..564359TCONS_00010269-exon-sc0000104-1491911889:564306..564359Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:564306..564359TCONS_00010269-exon-sc0000104-1510915933:564306..564359Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:564306..564359TCONS_00010269-exon-sc0000104-1575043694:564306..564359Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:564996..565181TCONS_00010269-exon-sc0000104-1491911889:564996..565181Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:564996..565181TCONS_00010269-exon-sc0000104-1510915933:564996..565181Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:564996..565181TCONS_00010269-exon-sc0000104-1575043694:564996..565181Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:565866..565951TCONS_00010269-exon-sc0000104-1491911889:565866..565951Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:565866..565951TCONS_00010269-exon-sc0000104-1510915933:565866..565951Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:565866..565951TCONS_00010269-exon-sc0000104-1575043694:565866..565951Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:566632..566770TCONS_00010269-exon-sc0000104-1491911889:566632..566770Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:566632..566770TCONS_00010269-exon-sc0000104-1510915933:566632..566770Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:566632..566770TCONS_00010269-exon-sc0000104-1575043694:566632..566770Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:566953..566991TCONS_00010269-exon-sc0000104-1491911889:566953..566991Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:566953..566991TCONS_00010269-exon-sc0000104-1510915933:566953..566991Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:566953..566991TCONS_00010269-exon-sc0000104-1575043694:566953..566991Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:567530..567577TCONS_00010269-exon-sc0000104-1491911889:567530..567577Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:567530..567577TCONS_00010269-exon-sc0000104-1510915933:567530..567577Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:567530..567577TCONS_00010269-exon-sc0000104-1575043694:567530..567577Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1491911889:568890..569223TCONS_00010269-exon-sc0000104-1491911889:568890..569223Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1510915933:568890..569223TCONS_00010269-exon-sc0000104-1510915933:568890..569223Clytia hemisphaericaexon
TCONS_00010269-exon-sc0000104-1575043694:568890..569223TCONS_00010269-exon-sc0000104-1575043694:568890..569223Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010269-proteinTCONS_00010269-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:563121..569223 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.083169	0	0	0.567719	0	7.60817	6.47011	11.4641	12.6636	1.95006	2.39149	2.17397	0	0.231861	0	0	0	0	0	0	0	2.15952	1.46975
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010269 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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