XLOC_005775 (gene) - C. hemisphaerica

Overview
NameXLOC_005775
Unique NameXLOC_005775
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000104:563121..569223+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005775 ID=XLOC_005775|Name=XLOC_005775|organism=Clytia hemisphaerica|type=gene|length=6103bp|location=Sequence derived from alignment at sc0000104:563121..569223+ (Clytia hemisphaerica)
aaaaaataccAATAGGATCGCTTCATTTAAACTTGTGAAATAGAAAGCTA GAATTTggtaaaaacatttgaaattattgaaaaaaattatatagaGGATT GAAGATCTCATACGATGTCCGATTTGACGATTCTATTCAGCATGGAGCAG TGTTAATGGGAAATAGGCAATTCTTTAACCCTAATCGCATTCTCATTAGT TTACATATTGTTTGAAGTCTGGTATACACGATGATGGACAGGACAATAGT TTATACGGCATTTGTTGCATCATTCATAGTATTACCTGTAAGTGGCCATG TTTACACCCCCTTCCCAAAGACCCGTTTGGATCTTTTCAGCCAGTGAGGG TAAAAATAGCGGACTGAAACTTCATAGGGATTGACATTTCCCTGTTTTTT AAAGCACCCATTTTTTAGCAATGACAATGCCTGGGTCGTAATTTTGGCGA AACGAGAGAATTGATCAATCCTGCTTCAGCTTTGCCTCAGTCAGTCTTCT CAACTGttatggaagaaaaaaattgcagtttttatgtAATCTGAATCGCA AAATTAAGGAGGATCAAATTTTTTGGAGGATAGAAGCAGTTCAGACTGAA TGGAATTGCATATATGCGTGTAGACTCTAAAGGACTGATTAAATAGCAGT TTAAAAAAGAATATTATAGGATGTCCTTCAAAAATATATCTCTTGCTTTT TTAGGTCATCAAAGGTCAAAACGGATCTAAGAATAATTTAGAATCAGAAC CGGGTAAGTCAACATAGGGTATGTCAACAAAGTATGCGAGATCATTGATG TTCAGATTATTCTAATTTTGTTAAATGCTAGAAAATTGGTTGTGATTCGT CTATAATTGGGCTTATTGGGCTATTTCATTAAAAATCCAAACAAGAGGGA GCGGGTGGTAGACCTTTTCAAGTTACAAAAAAAGGTTCTTGGAAATGTAt gaataccccctggaaaatggtaaAGAAACCCTTCGAaacattcttttcat accttaaaatgACGGGGGACGAACTAGAATCAGTCTggaattttagaata actttttaccctctgggaaaatgaaaaaaaaataccccGAAAATTCTTCT CGGATTACTCCCTGGAGATTTTTGGCCACACCTCTGTATATAAAATACAA AGTAAGAACCGATTTTTCTTCGTTGAATTTTCTAGATGACCAGAAAATAT GCAACTATAAgtttttcttcacaaatttcGTTGAAAAAGGTATATTACAC ATTCTTAAATTATAATTCAGTTCTTAATGTAATCGACCCTAAACCAGAAA GATATTATATAAGAGTTACATAAGAGTAgtctttcttatttttaccatgg CCAGTCTGTCACTAGCACTGCAGGCACAATAATTCTTTTGACGATCGCAT AATAAGGGCCTGGaaggtgttcattcaaaagctATTTCAAGTTGACTTAA AATAGGTTAACTAAAGCACTTTCACCCCCTTCACCTGACAGTTAAATCTT TATCCCTTAGCCGTAAAATAGTTTCCATTTTATTAGCTATTATTTTGCAC acctctgtgtcacagaccctcttggaccccagccccactggcaAAATTTT GATCCCtgatgggaaaataccctggaactTCAGCCCCACCAGTAAATTTA CACTCCCATTcgaaaatgtctaaaaattgcactccaaaaccatcccaact ggattttttaaccttggaacaataaaatttctatccccattgggatttta ataGGGATTTatatccccactgaaaaaaaagttccactggggctgtgaga caggggtgtttttgcATTCTCATGACATGTCAAGAGAGACTAGTATCATT TTCCTGTCCTCCTTTCCATAACTAGAAACACTTCCAAATCAACGAGACAT TAAAACATTACTCTCCGGTTCTTGCAACATTAACAATACTTGTGGAATTC ATCCTGCTGACGATTATCGTGGTTCACCATACACATATTTATCGTATGGT GAGAAACCAAAGGATAAAATCACCACTGGAATATGGAATATGGATTCCTT AGATTTAGAAGGTTAGTGAGCACCCTTGTTTCCCTTCAAGTTCAACAACG TTCATTTGACGTAACGACCGTATTGCCAAGCAAGATAGGGCATTCGGCTA CAGAaaacaaaatggaaaatttttcccattttcaccctgaaaagtggcta AAATAAGTAGacaaaaaatttgattattttataatttataccctgaaatt tccaccctgtcaaaaataaacatcttgaaaattagtaaatttaagaccct gtcagatatcttcagagcctaaaaaagagacccaattttgcctaagtgct cCCGGGGTCGCGTCATACCAAAGACTCTGTacttattactaaaaaaagGT ACTTTTTGCCTCTCCTGCTTGATATTCAGCAATTAAAAGAAGGATTAAAT GTaaatggagcaatccagggagaaaagAGTAGCAGcgttcaacgtttttc taacatttacaacgtccatataacgttagaaaaacgttgaaacaacgttg tgtgccagctgggattacTCTCGATCAGCAATGTGTAATATCTTGTATTA AGACTACCAAGGAGCTATAGTTACATATCTTAAATTATTTCTGATTGTCG AAATTGGTGATTTCATCTTGTAGGATGTTGGGGTTATATGNGTTACCTAT CTTAAATTATTTCTGATTGTCGAAATTCATGATTTCATCTTGTAGGATGT TGGGGTTTTATATTTCTGGTCAAAGATTCTAAAGAAAATGTTGTGATGCA TAAATATTATAACTTCAAAGATCTCAACAGGGTGAGCCCATGTGTATAGT TTACAAGAATAATTCATGAGAATTTATAAAGACAAAAACGTTTTCTAGTT TGAATTACAGACCTCTGTAGAGATTACGGGCCTAGTAAAGCATTCCAGAA ATCTAAATAAATTTCCAGTCTAGTTATGAGCCCCCTCTCTAACAGTTAGC GTGATGTCGTGTTAGAGACATGATAACTAGAAGTAattttcgtgattgcg tgatcgagGGTCAAAATGTGAAcgtgaattgaaaaactttttagtCTTGG CTTATTTTAAAGGGATGTGCTATTATCTAAGCTTTTGGCGATTGACAATA CGAAATCAGAGAAGATCGTGATCAGTGTTACCCCTATTGGAGCATCAGTT AAAACattcgaatatttttttatataaggaatacgtttataaggaacttg aggctgaataTGGTCCAAAAATTAAGGAATTGATAAGGAACTGTTCAGGC TCAGAGTTTAAGGAACATTAAGGATTAAACTTGAACTTACCGACATATAA AATAACCTAAGATGAAATACCGCCTAAGTAAATAAGGAATTCGGTAAGGA ACTttcaggctgaaattctctggaaTAATAAGGAACTTCAGGCTCGGAGC TAGCAGAAAGGTTCCTcatgaaaaaacgtgtactggtAATTTggtattta tgtttttttagaATATAACTTTGgaatcattttcaaaagaatttatcaAA TTCAATGCTTCGGCTTATGGAGAAGTTTATACAGCCACTGGAATTCTTTT ACCAACATCATCATTTACTGTTCAAAAATCAACACTTTACCTACCAAAAA GTAAGGTGAATCTGAATCTGATGGTATCCTAGCTAGTTCCGATGtttatt ttttcctctttctgaccaatcttgctccacatccgtgtcaatccaatttg aaaaaacttctgAATCAAAATTGACacaaacaatatcactcttgtttaaa aacaaaacctttaaaactctTTTCTATTTCAGACGAATGTGAGACAACAG CATGGCATATGGCGGTCAAATGTAAGTATTTTTAAAACCGGTTAGATCCC ATCCTAACGTTAATACTGAAAATCGTCCCTGGTGATAAAAATACCCTGAA GATATAATAATTTTgtgaccctttcagagactccATAGCTAATTTATCgg ttttgtacccctttgagagacttttgagggttTAAAAAAAGAGATCATTA TGGCTTGCACACACCGACACCCATTTTGCCCAAGTAACCCCCGGGCTTTC CTTTTATTCTTGAGTTCTCGAGTTCTTAACGGTAGACTTCAACGTTagct ttttatttcaaaattggacaaAACCTAATACAATTATAAGCCCTACAACA GGCATTATATTCTTTAACCTGACTTTCACTCATGATATGATTTATATATG ACGAAAGCACCCAAAATAGCCCAGaagtttaaaattcaaaatattagtGG CAAAGTTTTTGGGTACTTCCTTACCTATATAACATTACttcatgaatatc acgaattcCTGGATCTAGTAAAGTACatacattttatttttgctCCTTTC ATTTTATAGATTATTGGGCAATGTTTGATAAGCAACCAAAACAATGCACT TTTTACAGTAAGTCTGTCTGACTATGAAATGAGATATACAGTTGACTAAC GTACTAATTTGAAATTGAACGGGAataatcttatttgttcgaattacaga gagattcaaattatagaaaatattttaagagtctccttgacggggatttg gaattagttcgaattatagaaaaggTTTGAATAACAGAACTTCGACATTC TACTGTATTCAAATCAGATACTGAAATAGAAGCTCCTCATGCTATCTCCA AGGGATAGGGGTGCTTTTACGAAGTAAATGTGAGGTACGTGCATGCCAGG TCTTCGAACCCTGACCCTTATTAGAGTTTACAGCCATCACGGCggttaat gaaaaaaaaatagtgGTGGTAGAGCTTGGAACACCTCTACCATTGACTTC cgagcccgaagggctagaatcgagaCTCATGGATGGGATAAAGGTAATTA TTTCCCTTCCAGAACGCCCACGCgttgtttttacacaaacgctggattga aagtaaaatctatccctaaatttcaaaagatgcaatcctcaaaaacagaa aaaccgctagatacaatccgtcgttatgattgcggcgcgttctaggcacg ctctggatgggaaataagtggcttcactttttcttgcctgggaaaggtta gagagtctactctagcccttcgggatttaATTTCAATGACTTCTACCATT GCTTACTCCATCCCAGGCTAAACATATTTTCTAATTTATCCCACCTCTTA GATtcggcttttccagaaaaaaaccctaTACCCCCttttgaggaggtcca tttccgttccaaggttTTGGAACTTAAGGTACTTTTTCTGTAAGGTTTAA TATGTGGCGAAactccatagggagatacaaaaatctgtcgaaaataactg gaattccatgggggtaggcttttaaatcctactaaaattcagaattccag aggggtttaagcctgaaattgcccggaattccagggggttgcagcatttc cagccacaaaatgatggacctcctcaacaaggggtatacggtttttttct ggaaaagcccattactCCCTTTTTAGTGaacttgtgtagacgataggatt cataggcggttttagaccgcGTCAAACTTTCaaaggaagagatttgtaat tgtaatttaattttattttaacgaACGTTGCACTCCCTCCCACGTGcgct tgctctattgtcttaaatccgccagtggGATCGACTAGACCTCATTCTGC TAAATGCCATTTTCACTCTTCTTTGGATCTCCttgaaaacctgaaaaacc TTTTTACGTTCTCTTATAGATTCGAATGCAATGTCCAACATAGCATCTGA TTATTGTCAACAATATAAATATCCATCAGATGAATACATTACAAAGAACA TGGCAAGTCAACTCCAAGAAAAACAATGTCATATCAGTGTTATGCCGCCA CCATCATCAAACGATTCACACAAAGGCCAACAAATAACTGACAAGTCTGT AATTTACACAGCCGTTTTTTCATGTATTGGATTTATACTTTTAGTACTTA CTATTGTTGGGATAGTTATGTTTTGCAAACGATATAAAACGGTTATTACT GTAAATGCAAAAAACAGACCGAAAGTCTTTGATAACATTTAGTGCGAAAG CAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010269TCONS_00010269Clytia hemisphaericatranscript
TCONS_00010270TCONS_00010270Clytia hemisphaericatranscript
TCONS_00010271TCONS_00010271Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010269-proteinTCONS_00010269-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:563121..569223 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.16 0.08 0.37 0 0.15 0.05 0.17 0.15 0.15 0.57 0.66 17.81 15.2 25.5 34.41 6.79 8.34 2.81 1.65 0.52 0.36 0.74 1.72 0.31 0.79 0.45 0.26 4.53 3.66