|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011126 ID=TCONS_00011126|Name=TCONS_00011126|organism=Clytia hemisphaerica|type=transcript|length=1310bp
TAAGTTTTAAAATCAACCGCTTTTAAGATGATTTATTGAGGTATTGCTTG
TAGTACtagggtactagggttggcggataaggggtatgtgcggatgggac
cttcaaaaaccgacccttagagagactgaattttgctgaaaaggtgaccc
ttagagactttttttttaaacttccgtcgatttttgaaaaactcccTACC
CTCGgagagactttttccaaaaaaatttcctaaaatcatgaattttctga
cccttagagagactgatttaaattttcggatttttgcgacccttagagag
acaacTGAAGGgtgaaaaaccgacccttaccgtccgcacatactcagcac
ccatttttgcctaagccTCCCCTCCCGGGGGCTTGTAGTTATATATTTTG
TCCTTCAAGAGGAATGTATCAAAATGTGCGgactgtcaatttttttggaa
tagactttaatttcaAGCTCGGAGCTCCTAGATCCATAATTTATAAAAGG
CGGAAACATCTAATCAGCGGACACTAACGTGCTTCCCCAATGGTGTTCGC
TGATAAGAGACTCCATTGTACTTTCAACTGTATTCTTCCatatattttca
ggaaaatattACTAATACTTCACAGATACTTAAAGAAATAACATACAAAC
AGCGGATTAGACGATAATGTCGGACGATGAAAACGAAGACGaacttttga
acatttttaccGAATGTAAACAACAGATACTTCAGGAATTGCGACTTTTC
CTCGTTAAAGACATCGAGCCGCAAAAACTATACGCTAGCCTACGGTCTAG
AGGCGTGTTTGACGAAGACGATCAAGAGGAAATCGAATATGATCGACTTC
CTCGAAAGAAACGAGCAGAACGATTCCTCGATACGATTTCTCGAAAAGGA
GATGCAGGCTTTGATGCATTTTGTCAATGTATAGTAGAACAGTTGACCGG
ACAGTTgcatttattaaaaaaaatattgacagtatttgaaagtaaaatcc
aaGGTGCCGAAGAACTGCAGCATACCCGAAAATTAACCCGAATTCCACCG
ATGTTGATGATGAACAATTTTCCATCGCCCGGACAAATGGGTGGGCCGGA
ACTTCCCGAAGGATATTTCGGACGGTATATGAGTGAGCCACCACCCTCCT
ACGCAGAATCaacattgaaatattcttgatagtaacagttttttttttaa
atcaacttttcgcaaaaaatttgtaaatagtatttTGAATCAATAATTTT
CTCATTGCATATATCTTTTGAGTTATCCCTTCCTTcaataaaatcataaa
ttttctcttt Run BLAST on NCBI transcript from alignment at sc0000121:238089..239398- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011126 ID=TCONS_00011126|Name=TCONS_00011126|organism=Clytia hemisphaerica|type=transcript|length=1310bp|location=Sequence derived from alignment at sc0000121:238089..239398- (Clytia hemisphaerica)
TAAGTTTTAAAATCAACCGCTTTTAAGATGATTTATTGAGGTATTGCTTG
TAGTACTAGGGTACTAGGGTTGGCGGATAAGGGGTATGTGCGGATGGGAC
CTTCAAAAACCGACCCTTAGAGAGACTGAATTTTGCTGAAAAGGTGACCC
TTAGAGACTTTTTTTTTAAACTTCCGTCGATTTTTGAAAAACTCCCTACC
CTCGGAGAGACTTTTTCCAAAAAAATTTCCTAAAATCATGAATTTTCTGA
CCCTTAGAGAGACTGATTTAAATTTTCGGATTTTTGCGACCCTTAGAGAG
ACAACTGAAGGGTGAAAAACCGACCCTTACCGTCCGCACATACTCAGCAC
CCATTTTTGCCTAAGCCTCCCCTCCCGGGGGCTTGTAGTTATATATTTTG
TCCTTCAAGAGGAATGTATCAAAATGTGCGGACTGTCAATTTTTTTGGAA
TAGACTTTAATTTCAAGCTCGGAGCTCCTAGATCCATAATTTATAAAAGG
CGGAAACATCTAATCAGCGGACACTAACGTGCTTCCCCAATGGTGTTCGC
TGATAAGAGACTCCATTGTACTTTCAACTGTATTCTTCCATATATTTTCA
GGAAAATATTACTAATACTTCACAGATACTTAAAGAAATAACATACAAAC
AGCGGATTAGACGATAATGTCGGACGATGAAAACGAAGACGAACTTTTGA
ACATTTTTACCGAATGTAAACAACAGATACTTCAGGAATTGCGACTTTTC
CTCGTTAAAGACATCGAGCCGCAAAAACTATACGCTAGCCTACGGTCTAG
AGGCGTGTTTGACGAAGACGATCAAGAGGAAATCGAATATGATCGACTTC
CTCGAAAGAAACGAGCAGAACGATTCCTCGATACGATTTCTCGAAAAGGA
GATGCAGGCTTTGATGCATTTTGTCAATGTATAGTAGAACAGTTGACCGG
ACAGTTGCATTTATTAAAAAAAATATTGACAGTATTTGAAAGTAAAATCC
AAGGTGCCGAAGAACTGCAGCATACCCGAAAATTAACCCGAATTCCACCG
ATGTTGATGATGAACAATTTTCCATCGCCCGGACAAATGGGTGGGCCGGA
ACTTCCCGAAGGATATTTCGGACGGTATATGAGTGAGCCACCACCCTCCT
ACGCAGAATCAACATTGAAATATTCTTGATAGTAACAGTTTTTTTTTTAA
ATCAACTTTTCGCAAAAAATTTGTAAATAGTATTTTGAATCAATAATTTT
CTCATTGCATATATCTTTTGAGTTATCCCTTCCTTCAATAAAATCATAAA
TTTTCTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011126-exon-sc0000121-1575043694:238089..239398 | TCONS_00011126-exon-sc0000121-1575043694:238089..239398 | Clytia hemisphaerica | exon |
| TCONS_00011126-exon-sc0000121-1510915933:238089..239398 | TCONS_00011126-exon-sc0000121-1510915933:238089..239398 | Clytia hemisphaerica | exon |
| TCONS_00011126-exon-sc0000121-1491911889:238089..239398 | TCONS_00011126-exon-sc0000121-1491911889:238089..239398 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121 | supercontig | sc0000121:238089..239398 - |
Blast
The following BLAST results are available for this feature:
|
