XLOC_006229 (gene) - C. hemisphaerica

Overview
NameXLOC_006229
Unique NameXLOC_006229
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000121:238089..244785-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006229 ID=XLOC_006229|Name=XLOC_006229|organism=Clytia hemisphaerica|type=gene|length=6697bp|location=Sequence derived from alignment at sc0000121:238089..244785- (Clytia hemisphaerica)
TTTTATTTATTTAACAACGTTCCTGATCGTAGATAATAGCGTGTTCCGTC CCTAAATCCAACATCGTGGTTCATAAATTTAGAGACGCGCTGATATTTCA GCACGTTATCAAATAATTCTAAAGCTCCGTACTGTTAATGAATTTTTCAA AACAAAACAAAAAGATGGCGGAGGCAAAACCCACAACAAGTCCAACTCCA AAAGGTATTTTAAAACATAATCATGAGCATAATCCACATCCTGAAGTCAA GTTCGATGAAATGAATATTTTAGAGACCTACCATCCAGCAAACAAAGATT ATGGTCATATGAAAATCGATGAACCACCAACACCTTACAATCACGAGGTA AAAAAGTTTGGTGTTGTGTTTTTTATTTTAGATGGTTCAGTTTTTGATAG TTTGTGTCCATTTTTTATTTAAAGACTATTAGAATATTAAAGAAGGGGTA AAATAACTTTCAAAATACAAGTGCAAAGATGCCCCAACTTCAGTAGCAAC GTCCATTTTGTGTGTTCTGGTGCGTGTGCTGAGTGAGATAAAAAATTGAG ACAATCTCAATGACAATGATGGCAATAGGTTGCAATAAACCTTTAATGTG ACATTCTATTCTAAGCCTTTAGATGCTTTCCCAATTTGGGAATTTAAGAA AGTGAATGTCAAGATAAAGGGCCAAAGTTTATGCTCGCATGAGAAAAGTT TTTAACAAAATAGAAAATCTGTATCTTTAATTAACTTCTAGAACTTGAAA AAAAGTGTAAGATTTTAGGCATTTTATCCTTTTAAAACTTTTTAAGTCAA AAGGCAAATGCTACAGCTCTTCTCAAGAATAATTTGTCCCTTTAATCCAT TTTTTGTATGGAAATATTATTTTCATATATCTTGATTTGCTAAAGTTACT GCTCGGGAAAGTTTATACGTCTAAATCACGAAAATGTAATGTATTACTGT CAACTGATGTAACTTGGGACTATCTGACAAAACATGGGACGGTAATTCGG CCACCATTTCACTGAACCTCCGAAGTTATGATTTGAGTTAATGAACGGCG TATTAAAAATACACGATTTCTCTTTCGTACCAAGTAGGCTTTTAAATCAA ATATGAAAAAAATCTGTAGTGGACCACACACAAGTGTCTGTGCACTTTAA GAGGAATGAAGAAGTATGATTGACAGTCTGGGAAATCCTCTCAATTGCAC GCTTATGTTCCGAGGCCGTAAGTGCGCAATTGCACGGTTATCAAAATGGC AGAATTTTTAAGCGTGTAATTACACGCTTATCGAAATTGTAACGGGCGAA AGCCTAGGGCAGTTTTACTCAAAATTTATCGTAGAAGAAGATTCTGTAAA AATGGATTGCCCGTTAAACCATGCCTTCGCCCGAATTAGAGAATTCTGAA CCCCTTGAAATCCCTAAGCAATTTCAACCGGGGCGGGAGCAGGCGTAAAT TATAACCATGCAATTGCGCGCTTACGCCCTCGGAACATAAGCGTGCAATT GAGAGGATTTCCCGGACTGATTGATAAACTTGGTGGAGTTATCAAAACAA ATTTAAAAGAGATTTAACAGTAAGAGAAAATACAGGCCAGATATCAACCA GTCCCATGTTTCGACCAATTGTCCCCAGTTAGAGCAGTTGACGGTAGGGC TATCTGACAAAACATGTGACAGCAATTCGGCCTACATTTCACCAAACCGC CAAAGTCATTTTATTAACATACCTGCGAATCATGGATAGCAAATAATGTA AATACGCTACTCTACCAGGAAGGCTTAATTACACCACAACCAAACAGTTA GTCACACTAGGAAATCAAGCTTTCAGAAAAGACTAACATCAGTCATCTAC AGGATGTATTTGCAACAACAAGGATGAGAATTACCTGAATCAAGTTTGCA AGACAATTAATTAAAACTTGAAAGTTTGAAACAAAATAAAGCGTGCAGCA GCCAAAATCAACCAACAAAAATTTGTCATTTAATTCCTGAGACAGCACTT TGATTTTTAAGGCCTTGTTTATACGCTAAAGTAAAAATAATTCTGTACAT GTAAATGGGTCAGTGTTTGTGGTCCGGCAAAATTTCCGGAGAAATAGCCT ATCTGGCAGTGTGCAGACATAGGTGGGTTCCGTCTCCCCCGTAGATCTTT TTATTGGGAAGTTGATCTTCAAATTAGTTCTGAAGGTTGGCTTGGCTCAA ATCTTTTCATCTATGGCTCAAATGTTAGGAAATTTCTCATAGTTTTTGAG AATGTTGATTTCATTAAAAAGCGCCGGGTTATTTTTTCATGAATCCCTTT AGAAGTTTTGTGGCGCATTTTCCTGCTTGAGAGTCAGGTAAACGATATAG CGTTTTCGCAACATTAATCTTTGATAAGTATTTTGGCGGGACGCTAGTGT GACTAACTGTCAAAAGGAAAAATCTTTGCTACAAGAAACGCGTAAATGTG ATTGTGCTTATTTGCGCAAGCGTTCAAACACAGATACCAAAAAAGTCTGT TCTTCCACCACAGAAAATTGTGAGATCTGTTAATCAACACTCTGTAACTT TGACATGTCACATAGTGTCCTCCAGGGTTTGTTCCCCCCACCAGGGTTTG TTCCCCCCACCAGGGTTTGTTCCCCCCAGAAAATTCTGAAAATATCAGTT CCCCCCATGTAGCCATATAAATTTCTCAAATTTCAACCTGACACAAACGT GAAATTTTGCTGCAGTTTTTATGCCTAGTGAATTTTTCAGTCATGATCTA ATCACATGATATCATGTGGACTGACCTTGGTTGTTAAGATAAAGTTGAAG TGATTTCACACTTTCCCCCACCAAATTTGCCAACTATCGATGTTTTCCCC CCTCTTTTTTCCCCCCTTTACTATTCAAATTTTCATTCCCCCCCCCTCAC CCATCCAAAATTGGAAAATTGGTTTCCCCTATGGACACTATGCTGTGAAT CAATCGCGCATGCTGGAAAAAGTCTCTAGAGAAAAACAACACAAATCAAA AAATGGCGTCAAGATGTGAGCAGCCTGTGTTTTGTGTTTATATCAAAGTT ATTGTTTTTCTTTTCTTTTTAGTTTTCTGAAGGAGAAGAAGGTGCTGAAG GAGGGTCATCTGCTGGTAGTGGTGTTAGTGGTGTTGATGCAAGTCTGTTG GCTGGTAAACTAGAGAGTACTGAATCACGGAAAGACCATCAAAGTGAAAG TGAAAATGAAGATGACGATGATGAACATTTAAGTGAAGCTGCAAAACTAA AAAAGAAAGCGTTTAGCAGTAAGAGGAAAAATCATTATAATGAATTTACA AATGTACAAAAAGCACGCGAAATGATTGCTAAAGAGTTAGCTGAATTGGA AGATGATAATTAAGAATGGTGGTAGAGTGCGGGAAAAACGAAATTTGATT GAATTTTTAATTTATAAACACTTGATTGAAAGTCACCATCATGTGGTTTG TTGCTAAAAAGATATGAATTTATTATTAGGTTGATTTACGAAAATTAGAA TCATGAAATTGGAAAGCTAATGAAGACTTAAAAACAACTTTGTCATTTAA ACTGACATTAAAAATAATAAACATAAATGTTGATATGTATATTATAATAT ACATATTATAATAGTTCATAGATTTTTTCTCAATTTATCCCTCCCTCCAT TATACATAGTTTTTTTAAAGCAAATTTCTAATGCACCTTTTAGGAATTTC TACTTGTCATTTTTCACTATTTAAAATTTTATTCAAAAATTCTGTTACAG GGTTTTTTAGAGTTGTCTTGAGTTGTGTCTAAAAGACACTTTTGCGAATA GCTCTTGGTATACCGTAGCAAACAAACGTTTAAAACCAAACGTAATTTCA TTTTCTTTTCATCAATATATCCTTAGCTAGGGGAGGGGGGATACCAGGTG ATACTAGGTTTGCGAGGTGACGGGTATGTCCAAGGCAAAAAATTTTTTGG AGAGAGTAAAAATTGGCGTTTTTGGGACTCTAAGAGAGACGTTTCTCAAA AGTTTTGTAGATTTTCGCTCGTTTTTGAAAATCACGACCCTTTGAGAGAA GAAATTTTGGACCCTTACAAAGACTCAATTTGCTTTTTAATGGTTTTTGT ACCCCTTTGAGAGACTTTCGATGTTGTGAAAAAAGGAGTCTTATGCCTCG CACATACCCGGCCCCCATTTTGCCTAAGTGCCCCCCCCCCTCGGATCCTC TTTAAATGTGTAGCGTGCCTATATAGACCTTCCACTATATGTGGTACACG ATTTTAATTGAGAAATGTTTTTTTCGGGCTTATGGGCTTATAATATATCC TAAAAAATGGTTTGAACCAACTTTAACTTACAGAAACTGAGTGCTTTTTG GGGTGTACTAAGTGACAAAGAATTTTTTCGTTATCTGGTTACCCACATTT GAGTTTCTTTTAGGATTTTTGTGTTTGTAAAGAATGTTTATTTGTGATAT TATAGTAGTAATATTAGTAGTATTAAAATTGTAACATATTTCTTCAGACA CACATTTAGTATAACATGAAATTATACTTGAAAGCATTGGAATCATAACT GAGTTGTGAGGTTCACAGTTTCTCTATCGTGCTAAAATCGAAATATATCG CCATAGATTTGAATGTCTATTTAACCCGTTTAACTGTAATTTAGCTAACA GCCAATTCAGCGCCAAGGCCTGGCGAATGGGCGGCCGCCTTCCACCCTTT CTGTCTAAATGTCATTGCTTCGGGTCTATGTTGAAGTTAAAAAAAGATGT GTGACTTTCTTAGAAAACTATTCGAGATATGTCTTTTTGGAAATTCCCCT TTCTTATTATTCTCTACACATAGCAGCATATAGCGTCATTTTTGATAGAA ACTTAATAATCGAAAAAAGCTGACTTATAATTGATCACCCTCCTACATGG TATGACCAAGTTGTGTGTTATAGAACAGTTGNTCATTTTTGATAGAAACT TAATAATCGAAAAATGCTGACTTATAATTGATCACCCTCCTACATGGTAA GATTAAGTTGTGTTTATAGAACAAGTAATGAAGCTTCAAATTACAGAGCG GGGGAGAGATGTCTTTAAATGACGTTTATTGATAGCGAAACTTTTTTGTT TTGATTTTGATTATGAGCGTGTTGTATCACATACAAGAGCATTATTTCTA TTGACAAATTATTTCTGATGAAACGAAACGTGTAGTTATCTGTTAATGTT AGGTATGGTTGTATTCGGCAGAGGAAGAAATTTTGATTCTTTCATATAGT TTTTTTCAGGCAGTAGGCTAGCTTGAATACCGTTTTCGTTGATTTTATTG AATTCTATTTGAATCATGCTTTTCAAATCCTTTTATTTTATTTTTTAGTA AACAGGGACCTTTGCCAATGCTTATTCTTGAAAATCTTAAGTTTTAAAAT CAACCGCTTTTAAGATGATTTATTGAGGTATTGCTTGTAGTACTAGGGTA CTAGGGTTGGCGGATAAGGGGTATGTGCGGATGGGACCTTCAAAAACCGA CCCTTAGAGAGACTGAATTTTGCTGAAAAGGTGACCCTTAGAGACTTTTT TTTTAAACTTCCGTCGATTTTTGAAAAACTCCCTACCCTCGGAGAGACTT TTTCCAAAAAAATTTCCTAAAATCATGAATTTTCTGACCCTTAGAGAGAC TGATTTAAATTTTCGGATTTTTGCGACCCTTAGAGAGACAACTGAAGGGT GAAAAACCGACCCTTACCGTCCGCACATACTCAGCACCCATTTTTGCCTA AGCCTCCCCTCCCGGGGGCTTGTAGTTATATATTTTGTCCTTCAAGAGGA ATGTATCAAAATGTGCGGACTGTCAATTTTTTTGGAATAGACTTTAATTT CAAGCTCGGAGCTCCTAGATCCATAATTTATAAAAGGCGGAAACATCTAA TCAGCGGACACTAACGTGCTTCCCCAATGGTGTTCGCTGATAAGAGACTC CATTGTACTTTCAACTGTATTCTTCCATATATTTTCAGGAAAATATTACT AATACTTCACAGATACTTAAAGAAATAACATACAAACAGCGGATTAGACG ATAATGTCGGACGATGAAAACGAAGACGAACTTTTGAACATTTTTACCGA ATGTAAACAACAGATACTTCAGGAATTGCGACTTTTCCTCGTTAAAGACA TCGAGCCGCAAAAACTATACGCTAGCCTACGGTCTAGAGGCGTGTTTGAC GAAGACGATCAAGAGGAAATCGAATATGATCGACTTCCTCGAAAGAAACG AGCAGAACGATTCCTCGATACGATTTCTCGAAAAGGAGATGCAGGCTTTG ATGCATTTTGTCAATGTATAGTAGAACAGTTGACCGGACAGTTGCATTTA TTAAAAAAAATATTGACAGTATTTGAAAGTAAAATCCAAGGTGCCGAAGA ACTGCAGCATACCCGAAAATTAACCCGAATTCCACCGATGTTGATGATGA ACAATTTTCCATCGCCCGGACAAATGGGTGGGCCGGAACTTCCCGAAGGA TATTTCGGACGGTATATGAGTGAGCCACCACCCTCCTACGCAGAATCAAC ATTGAAATATTCTTGATAGTAACAGTTTTTTTTTTAAATCAACTTTTCGC AAAAAATTTGTAAATAGTATTTTGAATCAATAATTTTCTCATTGCATATA TCTTTTGAGTTATCCCTTCCTTCAATAAAATCATAAATTTTCTCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011128TCONS_00011128Clytia hemisphaericatranscript
TCONS_00011127TCONS_00011127Clytia hemisphaericatranscript
TCONS_00011126TCONS_00011126Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011127-proteinTCONS_00011127-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121supercontigsc0000121:238089..244785 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.92 29.79 11.83 8.67 62.49 50.7 58.31 59.76 47.25 48.12 29.27 26.1 29.72 22.27 22.3 19.66 29.56 28.24 17.85 26.2 23.34 20.4 25.1 27.09 24.47 25.18 28.92 20.83 46.98 47.85