TCONS_00011380 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011380
Unique NameTCONS_00011380
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3742

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011380 ID=TCONS_00011380|Name=TCONS_00011380|organism=Clytia hemisphaerica|type=transcript|length=3742bp
aaaaaataataaaatttaagaacaaatgACACCAAAATCAATAGCAATGA
CTTACTTATTGTGGATTTTCATAATGTTGGtcaaatcaaaagaaagtttt
cagATTCTCACCACTCAATCGTCATGTGATTCTAACCAATCAACAAAGAT
TTATATCGATCCACAATATGATCAGTGCACCTCCCAAGACTCGAAAACTG
TAAACTGTCCATCCTTATATGCTGCTTATCATTCTACTAAACTATTCgat
aatacttgtattatactGAAGAATTCAGTCGAATCGTACCCATTAAACGT
ATCAATACTTATCCATTCAAGTATCAATTTTGCCATCCAATCTCAGAATC
AAACATCCAACATTGATTGTCAAGGCAAACCCTATAACATATCAATCACT
CATTGCTCGAATATCAATTTTAAAGGAATTTCATTTACAAATTGCCCTTC
GTTTTCTAACGAGGACAGTATACTAACATTTGACCATAGTATAAATATAC
AGTTAACGAATATCATATTCCATGGAAACGAGAGTCAAAACATCTTGATA
AAAGACTGTGGGAATGTTGGAATGAATTCACTAAAGGCTAATCGAATCCG
GATTCTTTACCAAGATGTTTATGCATCATCTGGTGATATCCAAATATCAA
ACTCTAATTTCTCTTCTGGGAATAATCAATTTCCAAGTGAGGGTGCCAAA
GCTGCAGAAACCAGATATGGTAAAGGTGGtggaatttcaatgtttttgat
gAATGATATAAATAATACGCTTATCAATATCTCACAATGTAGATTCGATG
GTAATTCAGCTATCTATGGTGGTGGACTGTATTTGTATCTTGAAAAAGGA
ACTTTTAATAACAGACTAACATTAAATGAAACTTATTTCACCAATAACAA
TTCATCGACTTCAGGAGGTGCTCTTTATATTGCTGATTTCTCAAGTAGCC
CTGATAGTAATCAAATCATTATATGCAATTCGAATTTCACTAATAACTTT
TGTGATTTCAATGCAGGAGGATCTGCTATCTACGCTTACAATGGTTATCT
AAAATTCTTAGGTAACAATCGTATCGAACAAAATAACGGAACTGCAATGG
TTCTTGGTGCTACAGAGAGCTACATTAATGGTAACCTAACGCTTGCTAAC
AACAGCGGAAAATATGGTGGTGCTGCATTTTTATACAAGTGTGCCAGGTT
CAAAATAACCCCCACGTCTAATATAGTCTTCAGTAACAACAAAGCATCCA
GAGATGGAGGTGCGATGTTTGtgttccattttttcaaaaagaaaagttgt
aaatgttttttcgcTCCACAGAATAGAACCTCTTTTACCGGATCCATCAA
TTTTACTTATAACACTGCTGCAGTTTATGGTAGACATCTTTACTCATCCA
CCATGAAACTATGTCAGCAATTAAATTTCAACGATACACACAAAGAACGT
ATTTTCTTTACTGGAGAACCTCTAAATGCTGTTAGTACGGCAGCCGATAA
ATTCACACTCGTATCATCTCAATGGCGAAACATAGTGCctggtttttatt
ttaaaccTGAAATCAACATCACGAATGAGAAAGATCAAATTGTTAAATCA
CAAGTTCAAATGATCAGGAAAATTAGAAATACGTCTGAAGATTTAGATAA
TTCTACAAATGGTTTCGgtttattgaataaaaatacaTATGTTGTTGGGC
CAGACCACACTATCAATGTGGCTCTACAAGGACAATCATCTCAGAATTAT
ACACTTGATTTCTACGTTAGTAGTGAATTAGGAGAATTAACACAAAATTT
AACAGTGAAATTATCCAAATGCCCACCGCTGTATTATCtacatcaaaaca
aatgcaAATGTAATGCTAGTGGATTTATTGCTAAATGTACGTCCGATAAT
GCGCTACACATGCTACCAAATTGTTGGATTTCACCACAAGGTAACTCTTA
CGCATGCCCAGTAGATTATTGCGCTATATGTAGCGAACAGAGTAAATTGT
CAACTATCCAAAAATATTGTACGCATAATTTTACACAACCTTGTGACGTC
ACCCGAAATCAAGCATCACGATTATGTAGCCAGTGTCGTAAGAATCACAG
TACAACCATTGGTGGTCGACAATGCGCAGATTGCCGAGGTACGAATAATC
ACTATTGGACACCGATCCTGGCTATTGTCATTGTTAGCCTTTTCCTATTG
TTCATCGCTGCATCAAACTATACTACATATGCGTCTTTTTATCTACCCCT
TATCTTGTTCTATCAATTAGTAACATTGGTAATGACGACCACAAACAGCC
TTggtaatttttcagttttcttaTTCACCATTTTCCATGGTGATGACAGA
TTCATGTATCCATTTTGCTTCATAGATGGTCTTGATGATTTACATAAGAT
CTGGGTCCGATTCATTTCAGCTGCATTGTGGGTCATCCTTTATGGAGTTT
TATGCTTTATCTCAGCACGGGTGTTTCAGAATCAGATGAATCTCAAGCTA
GCGGTTTTACGATCCTGGCCAATCGTGTTTTTACTGTATTATATCGATat
catgaaattttcagtaaaTGCTTTAAAAGGGATGACTATTGATGATCGTA
TGTGTGTTTTCAACTATGCTGAAGAGGAGTTTAATGGACAAAGACATCGT
CCATTATTTTGGTGTAGTATTATAACCACAAGTTGTACTGGATTAATGAT
GCTTGGAATCTTCATGTTGAAAGTGTATTGTAAACGAAATCAAACTATAC
ACGAGTATGTTCATATTGAAGCCAAATCTTTAGATTCGATTGTCAGTCGT
CGAAAGATAATCTTAATATTCGGTTTCTACACCCTATATGTTACCCTCTT
CACGCTCATCATGGAGCTCACCGGTACGAATGCTCTCTTGTTGATTCTTT
CGATCACTTTCACTGGCATATTTGTTTATAAACAACCCTATCAATCCAAA
TTGTATAATTATTATGAGATATTGGTTTATGTTGATTTTATGATCATTGG
TATTTTAAGTAATAATCCAGATAACGAGCATTCAGCTATGGATAATTACA
CTTCGACTTTTGTTGAGGTTTTGATAGTGTTTCCATTTGTTGGTTGTCTT
GTATGCATGCTGATTACTTACTTTGGAACATGGAAATCAAATCAGCAGAA
TCTTGGAAATACAAGGAGTCATTTGATCCCATCACGCGTCATGGAGAGCT
TGTAAATTGTGGAAGACATTGTTTACTATGGGCTGTGGTCTGTGGCTGTG
GTTACGAATCGTTTATGTATTAACTGTAGTGTGGTTTAAGGCTGTTTCca
ctgagctttatataaacCCTAGGGGCAGTTTCAAAATATCGGCCAAGCTA
AATCTTTCGATAGGAGCTTGGTTGGAGTGTGTTACCCTAATGGTAGTAGC
AGTACTCAATCGCGGTGTTATGCATACCGCTACAATCTACTCTGTAATAT
TTTAGCAGTAAACCTTAAAAACAACTCTTTAGCTATGCTTATAAGTTCCT
TAAGTCCCCTTCCTCCAAATGTTTATGATTGATAAGCCCCTTAAACAACC
ATTGAAGTTGAGGGGAGGGGCTTTAcatcaaaaacataaaataccACTGT
TTACTGCCATAAATATTATAGGACTTTTTGTAGATATACTTTTCATTCGT
TTTATGTAGCACTGCTGAACATACAACAAAGTTTAAGAACTATAGTGGCA
TCTTTTTGTGGGTACCATTTCCAAGCACATACTTTGAGCAGT
Run BLAST on NCBI

protein sequence of TCONS_00011380-protein

>TCONS_00011380-protein ID=TCONS_00011380-protein|Name=TCONS_00011380-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1059bp
MTPKSIAMTYLLWIFIMLVKSKESFQILTTQSSCDSNQSTKIYIDPQYDQ
CTSQDSKTVNCPSLYAAYHSTKLFDNTCIILKNSVESYPLNVSILIHSSI
NFAIQSQNQTSNIDCQGKPYNISITHCSNINFKGISFTNCPSFSNEDSIL
TFDHSINIQLTNIIFHGNESQNILIKDCGNVGMNSLKANRIRILYQDVYA
SSGDIQISNSNFSSGNNQFPSEGAKAAETRYGKGGGISMFLMNDINNTLI
NISQCRFDGNSAIYGGGLYLYLEKGTFNNRLTLNETYFTNNNSSTSGGAL
YIADFSSSPDSNQIIICNSNFTNNFCDFNAGGSAIYAYNGYLKFLGNNRI
EQNNGTAMVLGATESYINGNLTLANNSGKYGGAAFLYKCARFKITPTSNI
VFSNNKASRDGGAMFVFHFFKKKSCKCFFAPQNRTSFTGSINFTYNTAAV
YGRHLYSSTMKLCQQLNFNDTHKERIFFTGEPLNAVSTAADKFTLVSSQW
RNIVPGFYFKPEINITNEKDQIVKSQVQMIRKIRNTSEDLDNSTNGFGLL
NKNTYVVGPDHTINVALQGQSSQNYTLDFYVSSELGELTQNLTVKLSKCP
PLYYLHQNKCKCNASGFIAKCTSDNALHMLPNCWISPQGNSYACPVDYCA
ICSEQSKLSTIQKYCTHNFTQPCDVTRNQASRLCSQCRKNHSTTIGGRQC
ADCRGTNNHYWTPILAIVIVSLFLLFIAASNYTTYASFYLPLILFYQLVT
LVMTTTNSLGNFSVFLFTIFHGDDRFMYPFCFIDGLDDLHKIWVRFISAA
LWVILYGVLCFISARVFQNQMNLKLAVLRSWPIVFLLYYIDIMKFSVNAL
KGMTIDDRMCVFNYAEEEFNGQRHRPLFWCSIITTSCTGLMMLGIFMLKV
YCKRNQTIHEYVHIEAKSLDSIVSRRKIILIFGFYTLYVTLFTLIMELTG
TNALLLILSITFTGIFVYKQPYQSKLYNYYEILVYVDFMIIGILSNNPDN
EHSAMDNYTSTFVEVLIVFPFVGCLVCMLITYFGTWKSNQQNLGNTRSHL
IPSRVMESL
Run BLAST on NCBI

transcript from alignment at sc0000127:121432..126439-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011380 ID=TCONS_00011380|Name=TCONS_00011380|organism=Clytia hemisphaerica|type=transcript|length=5008bp|location=Sequence derived from alignment at sc0000127:121432..126439- (Clytia hemisphaerica)
AAAAAATAATAAAATTTAAGAACAAATGACACCAAAATCAATAGCAATGA CTTACTTATTGTGGATTTTCATAATGTTGGTCAAATCAAAAGAAAGTTTT CAGATTCTCACCACTCAATCGTCATGTGATTCTAACCAATCAACAAAGAT TTATATCGATCCACAATATGATCAGTGCACCTCCCAAGACTCGAAAACTG TAAACTGTCCATCCTTATATGCTGCTTATCATTCTACTAAACTATTCGAT AATACTTGTATTATACTGAAGAATTCAGTCGAATCGTACCCATTAAACGT ATCAATACTTATCCATTCAAGTATCAATTTTGCCATCCAATCTCAGAATC AAACATCCAACATTGATTGTCAAGGCAAACCCTATAACATATCAATCACT CATTGCTCGAATATCAATTTTAAAGGAATTTCATTTACAAATTGCCCTTC GTTTTCTAACGAGGACAGTATACTAACATTTGACCATAGTATAAATATAC AGTTAACGAATATCATATTCCATGGAAACGAGAGTCAAAACATCTTGATA AAAGACTGTGGGAATGTTGGAATGAATTCACTAAAGGCTAATCGAATCCG GATTCTTTACCAAGATGTTTATGCATCATCTGGTGATATCCAAATATCAA ACTCTAATTTCTCTTCTGGGAATAATCAATTTCCAAGTGAGGGTGCCAAA GCTGCAGAAACCAGATATGGTAAAGGTGGTGGAATTTCAATGTTTTTGAT GAATGATATAAATAATACGCTTATCAATATCTCACAATGTAGATTCGATG GTAATTCAGCTATCTATGGTGGTGGACTGTATTTGTATCTTGAAAAAGGA ACTTTTAATAACAGACTAACATTAAATGAAACTTATTTCACCAATAACAA TTCATCGACTTCAGGAGGTGCTCTTTATATTGCTGATTTCTCAAGTAGCC CTGATAGTAATCAAATCATTATATGCAATTCGAATTTCACTAATAACTTT TGTGATTTCAATGCAGGAGGATCTGCTATCTACGCTTACAATGGTTATCT AAAATTCTTAGGTAACAATCGTATCGAACAAAATAACGGAACTGCAATGG TTCTTGGTGCTACAGAGAGCTACATTAATGGTAACCTAACGCTTGCTAAC AACAGCGGAAAATATGGTGGTGCTGCATTTTTATACAAGTGTGCCAGGTT CAAAATAACCCCCACGTCTAATATAGTCTTCAGTAACAACAAAGCATCCA GAGATGGAGGTGCGATGTTTGTGTTCCATTTTTTCAAAAAGAAAAGTTGT AAATGTTTTTTCGCTCCACAGAATAGAACCTCTTTTACCGGATCCATCAA TTTTACTTATAACACTGCTGCAGTTTATGGTAGACATCTTTACTCATCCA CCATGAAACTATGTCAGCAATTAAATTTCAACGATACACACAAAGAACGT ATTTTCTTTACTGGAGAACCTCTAAATGCTGTTAGTACGGCAGCCGATAA ATTCACACTCGTATCATCTCAATGGCGAAACATAGTGCCTGGTTTTTATT TTAAACCTGAAATCAACATCACGAATGAGAAAGATCAAATTGTTAAATCA CAAGTTCAAATGATCAGGAAAATTAGAAATACGTCTGAAGATTTAGATAA TTCTACAAATGGTTTCGGTTTATTGAATAAAAATACATATGTTGTTGGGC CAGACCACACTATCAATGTGGCTCTACAAGGACAATCATCTCAGAATTAT ACACTTGATTTCTACGTTAGTAGTGAATTAGGAGAATTAACACAAAATTT AACAGTGAAATTATCCAAATGCCCACCGCTGTATTATCTACATCAAAACA AATGCAAATGTAATGCTAGTGGATTTATTGCTAAATGTACGTCCGATAAT GCGCTACACATGCTACCAAATTGTTGGATTTCACCACAAGGTAACTCTTA CGCATGCCCAGTAGATTATTGCGCTATATGTAGCGAACAGAGTAAATTGT CAACTATCCAAAAATATTGTACGCATAATTTTACACAACCTTGTGACGTC ACCCGAAATCAAGCATCACGATTATGTAGCCAGTGTCGTAAGAATCACAG TACAACCATTGGTGGTCGACAATGCGCAGATTGCCGAGGCACAAATAATC ACTATTGGACGCCGATCCTTGCTATTGTCATTGTTACNCATTGCGCATAT TGCCGAGGTACGAATAATCACTATTGGACACCGATCCTGGCTATTGTCAT TGTTAGCCTTTTCCTATTGTTCATCGCTGCATCAAACTATACTACATATG CGTCTTTTTATCTACCCCTTATCTTGTTCTATCAATTAGTAACATTGGTA ATGACGACCACAAACAGCCTTGGTAATTTTTCAGTTTTCTTATTCACCAT TTTCCATGGTGATGACAGATTCATGTATCCATTTTGCTTCATAGATGGTC TTGATGATTTACATAAGATCTGGGTCCGATTCATTTCAGCTGCATTGTGG GTCATCCTTTATGGAGTTTTATGCTTTATCTCAGCACGGGTGTTTCAGAA TCAGATGAATCTCAAGCTAGCGGTTTTACGATCCTGGCCAATCGTGTTTT TACTGTATTATATCGATATCATGAAATTTTCAGTAAATGCTTTAAAAGGG ATGACTATTGATGATCGTATGTGTGTTTTCAACTATGCTGAAGAGGAGTT TAATGGACAAAGACATCGTCCATTATTTTGGTGTAGTATTATAACCACAA GTTGTACTGGATTAATGATGCTTGGAATCTTCATGTTGAAAGTGTATTGT AAACGAAATCAAACTATACACGAGTATGTTCATATTGAAGCCAAATCTTT AGATTCGATTGTCAGTCGTCGAAAGATAATCTTAATATTCGGTTTCTACA CCCTATATGTTACCCTCTTCACGCTCATCATGGAGCTCACCGGTACGAAT GCTCTCTTGTTGATTCTTTCGATCACTTTCACTGGCATATTTGTTTATAA ACAACCCTATCAATCCAAATTGTATAATTATTATGAGATATTGGTTTATG TTGATTTTATGATCATTGGTATTTTAAGTAATAATCCAGATAACGAGCAT TCAGCTATGGATAATTACACTTCGACTTTTGTTGAGGTTTTGATAGTGTT TCCATTTGTTGGTTGTCTTGTATGCATGCTGATTACTTACTTTGGAACAT GGAAATCAAATCAGCAGAATCTTGGTAAGTTTAAGCTAACTTAAAGGGAT AATCAGATGGTTTGTAATATTTGACAGGTAGGATCCTTCTATTATCCTGA GCAAAATCTCAAAACATTTTTGCCTAACTATTTTCCAAAGTCGAGATTAT TTAAGTTACAAGTTTTTGCCTATTAGGATGAAAACAATCGAATTTCAACG TAAGAACCGTGTAAGAACCCAGTTTTCAAAAATTTCAAATTTTGATATCT CGTTGGATTTTGGAAAATTGTACACAGAAATAGTTCGAGGTTTTACTAAC AGAAGGTTTCTGCCATCTAAATATCTCAAACCATCTGATTATCCCCTTCC AGGACCATTGCTTTTATAAGCCAAAAGTAAGAGTTTTTATGACACATCCC CTTCTCACACACCCAGTGGAGTTTTTTCAGCCAGTGGGGATATAAATAAC AAACTGAAACTCGATGGGGATTGATATTCCCATATTCTTTGTGGCTGGGG ATTTCATTTCTTTTGTTTTCAAGTCAGAAAATTCAATGGGGATGGTAAAA ATAGCATAGTATTTCACAAATACTATGCTATTTTTGGGGACAAATATTGG AGGGTAATTTTCCACCGGGGACAATATTTTGGCCAATTTTACCAGTTGGA AAGGGGTCCCAGTGGGTGGGTCTTTGAGAATTATTATTATGACGAAAACA CTTCAAAGAGCTGTATAGAGGTCTGAAATTTGGTGAGTAGTTCTTTGGGT CATTTGTTTGGAAAATAATTTCAATGATTTTTCATCCATTACAACCGAGT GTGTAATACAAGGATTAAATTTTACTTGCTATGCAGTAGGGTTATTTAAG GCGAGGTCAATTCGATCTGTTGTTTTACGGGCCAAGCTATCCAAAAAATG AGGGTCGGTCGGTCGGCGAAAAAATAAAAATAAAAGCAGCACAAAAATGT GAAATAGAAAATAAAAAGGCACAAAAAGGTGGAAATCATGGATAAAATTA AAAATTGAACATAAATTTCTCAAACCCTTGGAAAATCTACCAAAATTTTG AAAATTTGGGAATCTGTAAAGCAATGACAATAAAGATGTACTACTAAAAT AAATGTTTCGATTTTTGGAATTTCAGGGTCGGTCGGTTCCGTAAAATAAC TAATCAAATTGGTCTCACCTAATGGAACATTATTCATTAGTTCATTTTTT TTTTTTTTCAATTTTATATAGGAAATACAAGGAGTCATTTGATCCCATCA CGCGTCATGGAGAGCTTGTAAATTGTGGAAGACATTGTTTACTATGGGCT GTGGTCTGTGGCTGTGGTTACGAATCGTTTATGTATTAACTGTAGTGTGG TTTAAGGCTGTTTCCACTGAGCTTTATATAAACCCTAGGGGCAGTTTCAA AATATCGGCCAAGCTAAATCTTTCGATAGGAGCTTGGTTGGAGTGTGTTA CCCTAATGGTAGTAGCAGTACTCAATCGCGGTGTTATGCATACCGCTACA ATCTACTCTGTAATATTTTAGCAGTAAACCTTAAAAACAACTCTTTAGCT ATGCTTATAAGTTCCTTAAGTCCCCTTCCTCCAAATGTTTATGATTGATA AGCCCCTTAAACAACCATTGAAGTTGAGGGGAGGGGCTTTACATCAAAAA CATAAAATACCACTGTTTACTGCCATAAATATTATAGGACTTTTTGTAGA TATACTTTTCATTCGTTTTATGTAGCACTGCTGAACATACAACAAAGTTT AAGAACTATAGTGGCATCTTTTTGTGGGTACCATTTCCAAGCACATACTT TGAGCAGT

Coding sequence (CDS) from alignment at sc0000127:121432..126439-

>TCONS_00011380 ID=TCONS_00011380|Name=TCONS_00011380|organism=Clytia hemisphaerica|type=CDS|length=3180bp|location=Sequence derived from alignment at sc0000127:121432..126439- (Clytia hemisphaerica)
ATGACACCAAAATCAATAGCAATGACTTACTTATTGTGGATTTTCATAAT
GTTGGTCAAATCAAAAGAAAGTTTTCAGATTCTCACCACTCAATCGTCAT
GTGATTCTAACCAATCAACAAAGATTTATATCGATCCACAATATGATCAG
TGCACCTCCCAAGACTCGAAAACTGTAAACTGTCCATCCTTATATGCTGC
TTATCATTCTACTAAACTATTCGATAATACTTGTATTATACTGAAGAATT
CAGTCGAATCGTACCCATTAAACGTATCAATACTTATCCATTCAAGTATC
AATTTTGCCATCCAATCTCAGAATCAAACATCCAACATTGATTGTCAAGG
CAAACCCTATAACATATCAATCACTCATTGCTCGAATATCAATTTTAAAG
GAATTTCATTTACAAATTGCCCTTCGTTTTCTAACGAGGACAGTATACTA
ACATTTGACCATAGTATAAATATACAGTTAACGAATATCATATTCCATGG
AAACGAGAGTCAAAACATCTTGATAAAAGACTGTGGGAATGTTGGAATGA
ATTCACTAAAGGCTAATCGAATCCGGATTCTTTACCAAGATGTTTATGCA
TCATCTGGTGATATCCAAATATCAAACTCTAATTTCTCTTCTGGGAATAA
TCAATTTCCAAGTGAGGGTGCCAAAGCTGCAGAAACCAGATATGGTAAAG
GTGGTGGAATTTCAATGTTTTTGATGAATGATATAAATAATACGCTTATC
AATATCTCACAATGTAGATTCGATGGTAATTCAGCTATCTATGGTGGTGG
ACTGTATTTGTATCTTGAAAAAGGAACTTTTAATAACAGACTAACATTAA
ATGAAACTTATTTCACCAATAACAATTCATCGACTTCAGGAGGTGCTCTT
TATATTGCTGATTTCTCAAGTAGCCCTGATAGTAATCAAATCATTATATG
CAATTCGAATTTCACTAATAACTTTTGTGATTTCAATGCAGGAGGATCTG
CTATCTACGCTTACAATGGTTATCTAAAATTCTTAGGTAACAATCGTATC
GAACAAAATAACGGAACTGCAATGGTTCTTGGTGCTACAGAGAGCTACAT
TAATGGTAACCTAACGCTTGCTAACAACAGCGGAAAATATGGTGGTGCTG
CATTTTTATACAAGTGTGCCAGGTTCAAAATAACCCCCACGTCTAATATA
GTCTTCAGTAACAACAAAGCATCCAGAGATGGAGGTGCGATGTTTGTGTT
CCATTTTTTCAAAAAGAAAAGTTGTAAATGTTTTTTCGCTCCACAGAATA
GAACCTCTTTTACCGGATCCATCAATTTTACTTATAACACTGCTGCAGTT
TATGGTAGACATCTTTACTCATCCACCATGAAACTATGTCAGCAATTAAA
TTTCAACGATACACACAAAGAACGTATTTTCTTTACTGGAGAACCTCTAA
ATGCTGTTAGTACGGCAGCCGATAAATTCACACTCGTATCATCTCAATGG
CGAAACATAGTGCCTGGTTTTTATTTTAAACCTGAAATCAACATCACGAA
TGAGAAAGATCAAATTGTTAAATCACAAGTTCAAATGATCAGGAAAATTA
GAAATACGTCTGAAGATTTAGATAATTCTACAAATGGTTTCGGTTTATTG
AATAAAAATACATATGTTGTTGGGCCAGACCACACTATCAATGTGGCTCT
ACAAGGACAATCATCTCAGAATTATACACTTGATTTCTACGTTAGTAGTG
AATTAGGAGAATTAACACAAAATTTAACAGTGAAATTATCCAAATGCCCA
CCGCTGTATTATCTACATCAAAACAAATGCAAATGTAATGCTAGTGGATT
TATTGCTAAATGTACGTCCGATAATGCGCTACACATGCTACCAAATTGTT
GGATTTCACCACAAGGTAACTCTTACGCATGCCCAGTAGATTATTGCGCT
ATATGTAGCGAACAGAGTAAATTGTCAACTATCCAAAAATATTGTACGCA
TAATTTTACACAACCTTGTGACGTCACCCGAAATCAAGCATCACGATTAT
GTAGCCAGTGTCGTAAGAATCACAGTACAACCATTGGTGGTCGACAATGC
GCAGATTGCCGAGGTACGAATAATCACTATTGGACACCGATCCTGGCTAT
TGTCATTGTTAGCCTTTTCCTATTGTTCATCGCTGCATCAAACTATACTA
CATATGCGTCTTTTTATCTACCCCTTATCTTGTTCTATCAATTAGTAACA
TTGGTAATGACGACCACAAACAGCCTTGGTAATTTTTCAGTTTTCTTATT
CACCATTTTCCATGGTGATGACAGATTCATGTATCCATTTTGCTTCATAG
ATGGTCTTGATGATTTACATAAGATCTGGGTCCGATTCATTTCAGCTGCA
TTGTGGGTCATCCTTTATGGAGTTTTATGCTTTATCTCAGCACGGGTGTT
TCAGAATCAGATGAATCTCAAGCTAGCGGTTTTACGATCCTGGCCAATCG
TGTTTTTACTGTATTATATCGATATCATGAAATTTTCAGTAAATGCTTTA
AAAGGGATGACTATTGATGATCGTATGTGTGTTTTCAACTATGCTGAAGA
GGAGTTTAATGGACAAAGACATCGTCCATTATTTTGGTGTAGTATTATAA
CCACAAGTTGTACTGGATTAATGATGCTTGGAATCTTCATGTTGAAAGTG
TATTGTAAACGAAATCAAACTATACACGAGTATGTTCATATTGAAGCCAA
ATCTTTAGATTCGATTGTCAGTCGTCGAAAGATAATCTTAATATTCGGTT
TCTACACCCTATATGTTACCCTCTTCACGCTCATCATGGAGCTCACCGGT
ACGAATGCTCTCTTGTTGATTCTTTCGATCACTTTCACTGGCATATTTGT
TTATAAACAACCCTATCAATCCAAATTGTATAATTATTATGAGATATTGG
TTTATGTTGATTTTATGATCATTGGTATTTTAAGTAATAATCCAGATAAC
GAGCATTCAGCTATGGATAATTACACTTCGACTTTTGTTGAGGTTTTGAT
AGTGTTTCCATTTGTTGGTTGTCTTGTATGCATGCTGATTACTTACTTTG
GAACATGGAAATCAAATCAGCAGAATCTTGGAAATACAAGGAGTCATTTG
ATCCCATCACGCGTCATGGAGAGCTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006381XLOC_006381Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011380-proteinTCONS_00011380-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011380-exon-sc0000127-1575043694:124302..126439TCONS_00011380-exon-sc0000127-1575043694:124302..126439Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1575043694:123216..124232TCONS_00011380-exon-sc0000127-1575043694:123216..124232Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1575043694:121432..122018TCONS_00011380-exon-sc0000127-1575043694:121432..122018Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1510915933:124302..126439TCONS_00011380-exon-sc0000127-1510915933:124302..126439Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1510915933:123216..124232TCONS_00011380-exon-sc0000127-1510915933:123216..124232Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1510915933:121432..122018TCONS_00011380-exon-sc0000127-1510915933:121432..122018Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1491911889:124302..126439TCONS_00011380-exon-sc0000127-1491911889:124302..126439Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1491911889:123216..124232TCONS_00011380-exon-sc0000127-1491911889:123216..124232Clytia hemisphaericaexon
TCONS_00011380-exon-sc0000127-1491911889:121432..122018TCONS_00011380-exon-sc0000127-1491911889:121432..122018Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:121432..126439 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.366894 0.724634 0.363836 0.192564 0.274094 0.242034 0.554293 0.643722 0.219578 0.890937 0.390818 0 0.754506 0.736541 2.26583 1.8143 0.845194 0.705985 0.95097 0.996408 1.2913 0.744534 1.74955 2.31604 0.425389 1.4465 2.28269 1.93659 2.4533 1.94733
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011380 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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