TCONS_00011737 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011737
Unique NameTCONS_00011737
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1838

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011737 ID=TCONS_00011737|Name=TCONS_00011737|organism=Clytia hemisphaerica|type=transcript|length=1838bp
TTcgaattcaagatggcggcatTTTCAATGTAGACTCTGGCAGTGACGAC
AGTAATGATAATAACATGTCATCACCTGAAAGAGGTGGTGACAATAATGA
ACAACAAGGTGACAATGATGGCCCACATGAAGAAATGCAATCCACTCAAT
CACAAATGAAGGATTTATTTGGTGCAGAATCAGATGCTTCAAAAGATAGC
AGTGACAGTGCAACTAGTAGTGATGAAGGAAATGCAGCAGAACCAAAAGC
TTCATCGGATGTTAACTTTGATGAGCCAAAAGAGGAGAATAGCGACGAGG
AAGGGCGTGACCCTCCACAACAAGCAAGCAGTGACAGTGATAGTGACATG
GGCATTGGAAGAAATAAATCAAGTACAGGAGGTGGAGCCAGTGCTGCGCC
CACCACTCAAGATCTTTTTGGTGAAGATGTCTCCTCTGACGAAGAAACTC
AAGACAAACCATCAACATCATTTCGACCTGATATATCACCTTTGTCCGGT
GATGAAGATTCAATGAGGTTCAGTGAGAGGAGAATTCCAAGTCCTTCCAA
AGACAAAGAAGATGAGGAAGAAGAAGACGAAGGACTCTCAATTTCCATCG
AGCTTCCACGCTGTAACATATCACTGGGTAAAGAGCTGTACTTCGTTAAA
CTGCCCAATTTTTTGAGTGTGGATACTAAACCATTCGATTCGAACTATTA
TGAAGATATTTCATCAGATGAGGACGAAATCTTAGATGAAGAAGGAAGAG
CTAGATTGAAACTGAAGGTGGAGAACACAATTCGCTGGCGTTACTCCAAA
GATAAGGATGGTGAAGAGATCAAAGAATCAAACTGTCGTTTCGTTCGTTG
GTCTGATGGCTCGCTGTCCATGCATCTTGGTAACGAAGTGTTCGATGTCT
TCAAAATGAAAGTCGACGGTGAACAAAATCACCTCTTCGTTCAACAGGGA
ACAGGTCTTCAAGCACAAGCTGTCTTCAAGAACAAACTCTCCTTCCGTCC
TCATTCCACTACCTCTCAAACACATCGAAAGATGACGCAATCTATTGCAG
ACCGTATGAACAAAGCACAGAAAGTCAAGATGATGCCTGCTATGGAAAAA
GATCCTGAATCACAACGAGAATCTGCTTTGAAGaAAGAAGACGAAAGATT
ACGAGCAGCTAACCGTCGTGAAAGTCAACAACGACGCATGCGCGAGAAGA
GCCATTTGAAAGGGTTATCGTCAGGTTATTTGAATGACAATGATGATGAC
GACGGTTATGAGAACAGCATCGCTGCCATCAAAGCTGATTATAAAAATAA
GAAACGTCGACCATTAGACATTTACGATGACGACGAAGACGAAGAAAGTG
AGGACAGTGCAAAAGAAGATCGCCTTCGTAAAGCCAAACAACTGAACGAT
GACGATGAGGATGACGACGGCGACGAATTTGATGCCGACACACGTCGTAA
GAGAGACGAACTTGCTACGCGCAAAAAGAAAGCTGGTCGGAAGATTATTG
AATCAGATGAAGATTCGGATGCTGAGAGTGATTAAGGGTGATTATCGATG
AATGATGGAGCTCGTCCTACTTTTCTAGGGTGCTATCTATGATGTGCCTA
ATGTATATAGCGGTCAGATTTTGTGTTATGACAGGTTTACCTtgagggct
ctgaccatagtcggaaaattaattttagtatctgaacataaaagttatgt
tttagattctttaacacttttgacaaagaattgcctttataaattgcttt
ttaatcaaaccccttaagagtaattttaagaatttaattgcaaaaatgac
attatcaactttaaaaagacgttaataatatgttgcat
Run BLAST on NCBI

transcript from alignment at sc0000132:491315..499797+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011737 ID=TCONS_00011737|Name=TCONS_00011737|organism=Clytia hemisphaerica|type=transcript|length=8483bp|location=Sequence derived from alignment at sc0000132:491315..499797+ (Clytia hemisphaerica)
TTcgaattcaagatggcggcatTTTCAATGTAGACTCgtgagtttttgtt
tttgtttttaaatattctttcagACTTTTAGTGTTTAGTTTTCCATGCTC
TCTTCTTTATATGTTTATAGTACCAAATCAAGGTACAGATATTTTTTATA
CACTTTACCTAGGATAGGTGCATGCATATTTCTAGCGGTATTCTACTTGC
TGTACTTGGTGCTAACTCCTTTCTGCGTTTTTTCTTCGATTCGTAAGTAG
ATTTTTTGTTATTCAATCCGTACGGGTGAAAATCGTTTATATTGGTTAGG
ATCAGGGTTGGAGTTCGAGAGTCAAAATAGGCATTTAATAAAAATACTTC
GATTTGTGAAGCATCTTTACGTCACatagaacaataaataaaagaaaata
gcaaaagaacgaAGGcaaggaattacccatagccacCATTTTGCAACCAT
ATGGGGAATCTCGATTTTACAGAAATGGGAATCCTGATATTGActaaagc
atcttctgaaaatttcattcttccccataaatagaccttttcaactttcc
atccgccatattgaactgtatgcaaaaattatggtggcaattttcaataa
agggtacatgaaaaactcaaacgggactcaatgcgggttaagtaaataaa
aactcgtagcgaatgatgattcaaagaagtgcttagctatcaaaaacttt
ttccgacaTTTTTCCGTACAAGCAGTACATAACATGTCGCTGCTTTGTAT
ATTTGTTTAAGATTTTATTTCTTATCCTTGGTTGAGTGAGAAAATTAACT
CTTCTTTTCTTGtgtgtaagtgcactttatagttttgatttccattgaag
aatcatattctggtttttatgttattagatgctgttttagagttAGAGCT
AGCCTGACGAAGAAATCCCTACATTAATGACTTTCTAATGAAAATTAATT
CTGACATCAGTTATTCAAAATATTATATGATGTGtcgtaaattttcaaat
ttaaaaaggtgTGGCACTTTCTACGAAATAGATATAAAgatgagattttt
ttaaatcaatgcaCAAGTAAAAACAGAGGTTTTCTGCGCGAGAAGTGGAT
ATAGGTTGTTGCCCCGTTAAGATATGCCTCTGattatttcttttgaaatc
aaagtatttattattttattatttaaggTGCTTCAACACGTCAATTCATA
CAAAGAGCAAGATATATAGTGATAACACAGTCAATGCTCTCCAATTTGAC
GCTTATTGTGAAATGGCTTTTCCTTTAGCCTTTTGAGCTCTGTGCCAAGT
CATGACACCCCCTAGGGAAATTTTGGGGGCTTTGTTTCATCATCATTTAA
AAAGTCTGTATAGTGAATAGAGATAACTAAAATAAGATGTCAGAAGAAAT
GGTGAATCTTTTTGGCAGTGGCAGTGACGACAGTAATGATAATAACATGT
CATCACCTGAAAGAGGTGGTGACAATAATGAACAACAAGGTGACAATGAT
GGCCCACATGAAGAAATGCAATCCACTCAATCACAAATGAAGGATTTATT
TGGTGCAGAATCAGATGCTTCAAAAGATAGCAGTGACAGTatataatgtt
tttaatttcaaagtTATATTAGATGCCATAAAATGAATAGAACCACAAAG
TGCTCCAAAAATATATCCGGAAATAATGAAATTGCTGGGACAAAAGTTTC
TTGGTACTGTTTACATATGATTAGAAATATTCAGAATAATAAAAAACATC
GATGATCCTGGATAAGCTATTCTTCTTCAATATTCTcactttttcctatt
ttttaccaaaaacaGTACTTTTTGGCATATCTTTCAAGAGTTGTATAATA
CAACATACCATTTAAGTTTTCTTCTGAAACTGGTAATAGTGTTGTATATT
GTTAGACTCTAGgtagaaaaataatgaaaactttaGGATTAGTTATGATG
GATATAAATTCCATATAAATTCCCTCCTCTTTTTCTAGGTGCAACTAGTA
GTGATGAAGGAAATGCAGCAGAACCAAAAGCTTCATCGGATGTAAGTAAA
ACAAATTTGGTCTGAAAAGTTGCAATTTCAGCAATTTCTAATGGGTTCAT
GTAGAAATACCATGTTCCTTCAAAAGAATCTATTAGTAATTTCCCTTTAA
AAATACAGGAATAGATGGCTTCTGTTAAATAAAAACagaaattttccttt
aaaaatacggataaataaaaatatttgggaaatttgtccaaaatacgatc
tctcgcttaccagaccccttttttgAACGTGGTGTTGTATTTAtacggta
caatatgaaatacagcatttatgtatgCGTTataagccaatcagattgct
tatatttttcgTGTTGAtgataagcaaacgatatcactcttatttaaaaa
caaaacctttaagcaaTTGAAATAAAAGCATTGAAATTTGAGTTCTCCCT
TTAACAGCTATTTGCAGTAAACTTCCAAATTCTCACAAGTCAAATTCAAA
ATGAGTATATAAATGCAGGGGTTGAAAAGATACTCAGACCCTTATAACCT
CCATAAAAGTAGATGGGAAACGGggctaaattcaaaatttaattttaaaa
ctgTAACCACAAGATATTTAACTCTGTAAACAAACTAAAAAACATATATG
ATAGGTATTTCCAACCTGTTTTTATTACTATTTTGATTAATTTGTTAGCT
TATTTTAGAAATTCATTAGGTCAAAAGAAGAGCTCAAAAGAGCGCCCATG
ACACCTTTCTTTTTGCACATCTTTTATAATATGTCTTCATCTTTTTTGGG
TCAATCTATATAGGAATGTCTCAATTCAGTCAAAAGTTCCTCAAAAGCTT
TTCCAAGATGAGAAAAAGTCATTAAGTCTTGCTAATTGTTTGGTTTTTAT
AACTACAAAAGTCTGTCCCTTGAACATTACTTTATACAACAGGTTAACTT
TGATGAGCCAAAAGAGGAGAATAGCGACGAGGAAGGGCGTGACCCTCCAC
AACAAGCAAGCAGTGACAGTGATAGTGACATGGGCATTGGAAGAAATAAA
TCAAGTACAGGAGGTGGAGCCAGTGCTGCGCCCACCACTCAAGATCTTTT
TGGTGAAGATGTCTCCTCTGACGAAGAAACTCAAGACAAAgtatgttttt
ttcttgaacGTTTGAATTCGCTTCAATGGTCACACTTTCTTGCCTAATTG
ATTCCGTCTATTATGTATGGCAAAATCATAATAATCCAAGCTGTCCCATA
GGGGTTACCCATTAAACTATATGAAAATTATCCAACATGAGTTTGATATA
ATCaggatatttctttacttttttgtaTTCTCTTAAATATTCTCTTCATA
ATTTAGTTATTTGCATAATTGCTTCTTTGGCTGCCAAAAGATTACATTGA
ATTATACTGAGCACATACAATTTTTGTCATTATTCTTTTTTCTACTAGCC
ATCAACATCATTTCGACCTGATATATCACCTTTGTCCGGTGATGAAGATT
CAATGAGGTTCAGTGAGAGGAGAATTCCAAGTCCTTCCAAAGACAAAGAA
GATGAGGAAGAAGAAGACGAAGGTCTGTACACACCTCCTTTTTTGGCTAA
TGTTGGctaaaattggctaaaattgGGATGTTCTCATTATTGTTTGCGAT
TTTCAGACGGCGTTCGGTGCACGTGTTTCCGTTTAGCGAGATTCGGCTGC
TCTCATTTTTCAAACATCAGGCTTGGATGCTCTTAAAAATTGACTCGAAA
AGTACTTATAATCTTTGATTTGAGGCATGCATTGTTCTTAATTAGTTCTT
AGGTTCTGGCCAAAATTAAGTCTTGTCATGTTCTCATTAAGCTATtctta
aacaaatattttttgtatttgcACAATTTCCACCTATGAAtccagtgctg
caaataacggccggtgaccggtaattaccggtcatttcGTAGTTTCTACC
GGCCAATCTGAAGCTCAATctttcattttgtccggttaaaatttaAAGAC
TAGAGGCTTAGATAAATACTTAATAAAGTTTCCAATTAAAAGAGGaatag
attttgaattaatacaggtgtttagccaatctaaaCGTCATTTCAGACTT
TTCTAATGGGGTTCTGCCAGACCCCCTGCTCAGACCCCCTGCTCAAATTA
TTttcgttgcactcaaaatattaccggccaactgaaatttccttatttgc
agcactggaATCAGTCAATGGAGGACTAATCAAGTAGGTCCAACACGTGT
AGTGCAACAATTAATCTCAGTGTAATCAATGACTGAACTGAGATTTCGGA
CTCAGAAATTTTGCTCTACCGAACGAGCTATGCAGTCTACTAGCGATGTA
AAAGTCACGAGTTTGAATCTCACTCCAGCCCTCAGTCTACAAGTTCAAAT
AACATTAAATTTAGATCTTTGCGCTGTGTGAATATTTTGGCTCTTTATCT
ACAAATTCATTCAAAGTATCTCCTTAATCCAGCTCATAAAGAGCTTTTTT
TCATTACCAAAAGGCTAAATAATTGATTGGATTGAATTGGATTGAATTCA
TATATcactttattttcttgttttatttGTGCAGGACTCTCAATTTCCAT
CGAGCTTCCACGCTGTAACATATCACTGGGTAAAGAGCTGTACTTCGTTA
AACTGCCCAATTTTTTGAGTGTGGATACTAAACCATTCGATTCGAACTAT
TATGAAGATATTTCATCAGATGAGGACGAAATCTTAGATGAAGAAGGAAG
AGCTAGATTGAAACTGAAGGTAAAGATAAACGAAACAACTAAATAGAGAA
AAGTGTTGAATTATCCTGGTTATAAACAACTGCTTTACAGTACAATACTC
TATATTGAAGTAAAATACCTTCGTCATATATTTTtttcggcttcaaaaat
cactggAATTAAGAAGATTGCTTTATGAAATTCGCTTCGTACATCTAAAT
GACACTTCGTACTCCGGCCAATTTATTTGCAAGTTACAGTCAATGAAAGT
GCCTCCAACTGATTTCAAAGCCACAATACCTATTGTAAAAGGGTGTAGGT
AATTATCATCTTTTGTCTGAACAAACAAATTTTCAACTCTCTCCCTTTGT
ACTTTTCAGGTGGAGAACACAATTCGCTGGCGTTACTCCAAAGATAAGGA
TGGTGAAGAGATCAAAGAATCAAACTGTCGTTTCGTTCGTTGGTCTGATG
GCTCGCTGTCCATGCATCTTGGTAACGAAGTGTTCGATGTCTTCAAAATG
AAAGTCGACGGTGAACAAAATCACCTCTTCGTTCAACAGGTATGTGGTTG
GATTTTCATAGGAAATTGTCTAATTAGATGTAAGTTGACTGGTTCGATGT
CTTCAACATCCAGGTTCTAATGGCTTCACCAAAAGTAAAGTTACACTTGC
TATAAAACCCTACTCCCAGTTCATGTTGTAAGCGAAAATCAATAAAAGTG
AGTTTTATACTaatagtttgagtaaagaaaacNTTTTCTTGTTTTATTTG
TGCAGGACTCTCAATTTCCATCGAGCTTCCACGCTGTAACATATCACTGG
GTAAAGAGCTGTACTTCGTTAAACTACCCAATTTCTTGAGTGTGGATACT
AAACCATTCGATTCGAACTATTATGAAGATATTTCATCAGACGAGGACGA
AATCTTGGATGAAGAAGGAAGAGCTAGATTGAAACTGAAGGTAAATATGA
ACGAAACAACTAAATAGAGAAAAGTGTTGAATTATCCTGGTTATAAACAA
CTGCTTTACAGTACAATACTCTATATTGAAGTAAAATGCCTTCGTCATAT
ATTTTtttcggcttcaaaaatcactggAATTAAGAAGATTGCTTTATGAA
ATTCGCTTCGTACATCTAAATGACACTTCGTACTCCGGCCAATTTATTTG
CAAGTTACAGTCAATGAAAGTGCCTCCAACTGATTTCAAAGCCACAATAC
CTATTGTAAAAGGGTGTAGGTAATTATCATCTTTTGTCTGAACAAACAAA
TTTTCAACTCTCTCCCTTTGTACTTTTCAGGTGGAGAACACAATTCGCTG
GCGTTACTCCAAAGATAAGGATGGTGAAGAGATCAAAGAATCAAACTGTC
GTTTCGTTCGTTGGTCTGATGGCTCGCTGTCCATGCATCTTGGTAACGAA
GTGTTCGATGTCTTCAAAATGAAAGTCGACGGTGAACAAAATCACCTCTT
CGTTCAACAGGTATGTGGTTGGATTTTCATAGGAAATTGTCTAATTAGAT
GTAAGTTGACTGGTTCGATGTCTTCAACATCCAGGTTCTAATGGCTTCAC
CAAAAGTAAAGTTACACTTGCTATAAAACCCTACTCCCAGTTCATGTTGT
AAGCGAAAATCAATAAAAGTGAGTTTTATACTagtagtttgagtaaagaa
aacgagtTTTCAGTCAATTTCATACTCCCATAGAATTTGCCAACTTTTTG
GTTACAGAAACGGCTAGTTGATTGATTGACATTGAGATATCGACATAGCT
ACCAAACAATGAATAAGTTTTTAAAAGGATATTTGTACAAGCTATATCAA
GGGCGATGCCTTTATCAAAACGACAGTTTTACGACAGTTTTTAAATTCCT
GGGCAGTTTTATTGTACGCCGTAGTTGTGCGTGTTCTTCTTAAAATGAAT
CGAGGTTTAAACATTGTTTGTGAGGCGTCCTTTTAATCCTTACTTTCAAA
GAACGAAAAGCTATTACAGTTTATAGAATGGTgctgaaattttccaaaga
tattAAAGACTTGGTCTTTATTTTCCAGGGAACAGGTCTTCAAGCACAAG
CTGTCTTCAAGAACAAACTCTCCTTCCGTCCTCATTCCACTACCTCTCAA
ACACATCGAAAGATGACGCAATCTATTGCAGACCGTATGAACAAAGCACA
GAAAGTCAAGATGATGCCTGCTATGGAAAAAGATCCTGAATCACAACGAG
AATCTGCTTTGAAGGTAAAACCTATTCATAATATTTGCATCTTGTGGGCC
CACTCCCTTTCTAAAGGAAGCGCTCTAACCTTTCCAAAAATCTATAATTA
TTGTAGTAAAGAGTAAAAGAGGGTTAAGTAATAGGGGAGGGGTAGATTTT
CAAAGGAAGGGATAggatttttagtatattttgtGATAATGTGCCATAAA
GCTTGtttttttaaaggctttttattTTTAGCAGTAAATTTTTGTAAGAC
TTTTAAGTTAATAAGTATGTGAAAAtattagaataaaaaatattgtcTTG
AAAGATTGACTTGAAATGGGAGAAAAGGAAGATAAGCTAATTTTTAAAGG
GCCCCTagatttcttgatattttcaatctctgttttttttttcaatgtag
aAAGAAGACGAAAGATTACGAGCAGCTAACCGTCGTGAAAGTCAACAACG
ACGCATGCGCGAGAAGAGCCATTTGAAAGGGTTATCGTCAGGTTATTTGA
ATGACAATGATGATGACGACGGTTATGAGAACAGCATCGCTGCCATCAAA
GCTGATTATAAAAGTAAGTATGATTAAGAAATATTAGGAATATACCTAAA
AATACCTAGGTTTACTTTAAGGGAGCTAATTATTTCGCCGGAACTTTTTC
GCTTTTTCGCGGTTTCTTTCCAAGAATTTAATTGATAATTTTCATGAAAC
ATTAAAATTATCTTACGTAAATTTCCCTCTTCGCAAATACAAGAAATGTG
CTTTATctaattttctttggaaaatacaaTAAGCATAATGAGTATTCCGC
GCTTAAAAATAAACATAACGTTCGTGAATACTTTCTCCAAGATGAAAAAC
GTTAACGTTAACAAAAGAAGGTCTTTCTGTAATCTAGTATTTAGTCTGTA
CTTTCAgtaatttttaccatttttacaGAAGGGGTTCTTACCATAATGTA
TTTAAAACCAGCTCAAACGTTACTATTTTTCTTTCTTGCAGATAAGAAAC
GTCGACCATTAGACATTTACGATGACGACGAAGACGAAGAAAGTGAGGAC
AGTGCAAAAGAAGATCGCCTTCGTAAAGCCAAACAACTGAACGATGACGA
TGAGGATGACGACGGCGACGAATTTGATGCCGACACACGTCGTAAGAGAG
ACGAACTTGCTACGCGCAAAAAGAAAGCTGGTCGGAAGATTATTGAATCA
GATGAAGATTCGGATGCTGAGAGTGATTAAGGGTGATTATCGATGAATGA
TGGAGCTCGTCCTACTTTTCTAGGGTGCTATCTATGATGTGCCTAATGTA
TATAGCGGTCAGATTTTGTGTTATGACAGGTTTACCTtgagggctctgac
catagtcggaaaattaattttagtatctgaacataaaagttatgttttag
attctttaacacttttgacaaagaattgcctttataaattgctttttaat
caaaccccttaagagtaattttaagaatttaattgcaaaaatgacattat
caactttaaaaagacgttaataatatgttgcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006597XLOC_006597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011737-exon-sc0000132-1491911889:491315..491351TCONS_00011737-exon-sc0000132-1491911889:491315..491351Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:491315..491351TCONS_00011737-exon-sc0000132-1510915933:491315..491351Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:491315..491351TCONS_00011737-exon-sc0000132-1575043694:491315..491351Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:492733..492902TCONS_00011737-exon-sc0000132-1491911889:492733..492902Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:492733..492902TCONS_00011737-exon-sc0000132-1510915933:492733..492902Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:492733..492902TCONS_00011737-exon-sc0000132-1575043694:492733..492902Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:493303..493355TCONS_00011737-exon-sc0000132-1491911889:493303..493355Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:493303..493355TCONS_00011737-exon-sc0000132-1510915933:493303..493355Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:493303..493355TCONS_00011737-exon-sc0000132-1575043694:493303..493355Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:494257..494454TCONS_00011737-exon-sc0000132-1491911889:494257..494454Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:494257..494454TCONS_00011737-exon-sc0000132-1510915933:494257..494454Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:494257..494454TCONS_00011737-exon-sc0000132-1575043694:494257..494454Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:494763..494886TCONS_00011737-exon-sc0000132-1491911889:494763..494886Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:494763..494886TCONS_00011737-exon-sc0000132-1510915933:494763..494886Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:494763..494886TCONS_00011737-exon-sc0000132-1575043694:494763..494886Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:495899..496083TCONS_00011737-exon-sc0000132-1491911889:495899..496083Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:495899..496083TCONS_00011737-exon-sc0000132-1510915933:495899..496083Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:495899..496083TCONS_00011737-exon-sc0000132-1575043694:495899..496083Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:496424..496603TCONS_00011737-exon-sc0000132-1491911889:496424..496603Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:496424..496603TCONS_00011737-exon-sc0000132-1510915933:496424..496603Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:496424..496603TCONS_00011737-exon-sc0000132-1575043694:496424..496603Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:498093..498278TCONS_00011737-exon-sc0000132-1491911889:498093..498278Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:498093..498278TCONS_00011737-exon-sc0000132-1510915933:498093..498278Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:498093..498278TCONS_00011737-exon-sc0000132-1575043694:498093..498278Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:498665..498827TCONS_00011737-exon-sc0000132-1491911889:498665..498827Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:498665..498827TCONS_00011737-exon-sc0000132-1510915933:498665..498827Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:498665..498827TCONS_00011737-exon-sc0000132-1575043694:498665..498827Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1491911889:499256..499797TCONS_00011737-exon-sc0000132-1491911889:499256..499797Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1510915933:499256..499797TCONS_00011737-exon-sc0000132-1510915933:499256..499797Clytia hemisphaericaexon
TCONS_00011737-exon-sc0000132-1575043694:499256..499797TCONS_00011737-exon-sc0000132-1575043694:499256..499797Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:491315..499797 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.07882	4.15398	17.0476	13.8765	16.5703	9.67875	10.5029	9.46583	11.5	16.008	4.19346	5.42534	5.5753	6.47979	9.0317	9.26897	8.61883	6.57068	2.95109	1.36955	5.39091	8.05407	8.73074	8.11479	5.38345	9.86409	2.79681	2.32633	4.36	3.86875
Blast
[Close]
BLAST of TCONS_00011737 vs. Swiss-Prot (Human)
Match: LEO1 (RNA polymerase-associated protein LEO1 OS=Homo sapiens GN=LEO1 PE=1 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 2.540e-85
Identity = 176/337 (52.23%), Postives = 223/337 (66.17%), Query Frame = 3 
Query:  405 TQDLFG--EDVSSDEETQDKPSTSFRP-DISPLSGDEDSMRFSERRIPSPSXXXXXXXXXXXGLSISIELPRCNISLGKELYFVKLPNFLSVDTKPFXXXXXXXXXXXXXXXXXXXGRARLKLKVENTIRWRYSKDKDGEEIKESNCRFVRWSDGSLSMHLGNEVFDVFKMKVDGEQNHLFVQQGTGLQAQAVFKNKLSFRPHSTTSQTHRKMTQSIADRMNKAQKVKMMPAMEKDPESQRESALKKEDERLRAANRRESQQRRMREKSHLKGXXXXXXXXXXXXXXXEN----SIAAIKADYKNKKRRPLDIYXXXXXXXXXXXXXXXRLRKAKQL 1394
            T DLFG  +D+SS  + +DKP T  +P D + L  D+      E  IP                 I +E+P+ N  LG +LYFVKLPNFLSV+ +PFD  YYED   DE+ + +E GR RLKLKVENTIRWR  +D++G EIKESN R V+WSDGS+S+HLGNEVFDV+K  + G+ NHLF++QGTGLQ QAVFK KL+FRPHST S THRKMT S+ADR +K QK++++P   +DPE QR   +KKE+ERLRA+ RRESQQRRMREK H +GLS+ YL  +  D+  E     S+AAIK  YK   R         + +E  +  K  RL KAK+L
Sbjct:  311 TMDLFGGADDISSGSDGEDKPPTPGQPVDENGLPQDQ----QEEEPIPE--------------TRIEVEIPKVNTDLGNDLYFVKLPNFLSVEPRPFDPQYYEDEFEDEEMLDEE-GRTRLKLKVENTIRWRIRRDEEGNEIKESNARIVKWSDGSMSLHLGNEVFDVYKAPLQGDHNHLFIRQGTGLQGQAVFKTKLTFRPHSTDSATHRKMTLSLADRCSKTQKIRILPMAGRDPECQRTEMIKKEEERLRASIRRESQQRRMREKQHQRGLSASYLEPDRYDEEEEGEESISLAAIKNRYKGGIREERARIYSSDSDEGSEEDKAQRLLKAKKL 628
The following BLAST results are available for this feature:
BLAST of TCONS_00011737 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LEO12.540e-8552.23RNA polymerase-associated protein LEO1 OS=Homo sap... [more]
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