XLOC_006597 (gene) - C. hemisphaerica

Overview
NameXLOC_006597
Unique NameXLOC_006597
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000132:491315..499797+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006597 ID=XLOC_006597|Name=XLOC_006597|organism=Clytia hemisphaerica|type=gene|length=8483bp|location=Sequence derived from alignment at sc0000132:491315..499797+ (Clytia hemisphaerica)
TTcgaattcaagatggcggcatTTTCAATGTAGACTCgtgagtttttgtt tttgtttttaaatattctttcagACTTTTAGTGTTTAGTTTTCCATGCTC TCTTCTTTATATGTTTATAGTACCAAATCAAGGTACAGATATTTTTTATA CACTTTACCTAGGATAGGTGCATGCATATTTCTAGCGGTATTCTACTTGC TGTACTTGGTGCTAACTCCTTTCTGCGTTTTTTCTTCGATTCGTAAGTAG ATTTTTTGTTATTCAATCCGTACGGGTGAAAATCGTTTATATTGGTTAGG ATCAGGGTTGGAGTTCGAGAGTCAAAATAGGCATTTAATAAAAATACTTC GATTTGTGAAGCATCTTTACGTCACatagaacaataaataaaagaaaata gcaaaagaacgaAGGcaaggaattacccatagccacCATTTTGCAACCAT ATGGGGAATCTCGATTTTACAGAAATGGGAATCCTGATATTGActaaagc atcttctgaaaatttcattcttccccataaatagaccttttcaactttcc atccgccatattgaactgtatgcaaaaattatggtggcaattttcaataa agggtacatgaaaaactcaaacgggactcaatgcgggttaagtaaataaa aactcgtagcgaatgatgattcaaagaagtgcttagctatcaaaaacttt ttccgacaTTTTTCCGTACAAGCAGTACATAACATGTCGCTGCTTTGTAT ATTTGTTTAAGATTTTATTTCTTATCCTTGGTTGAGTGAGAAAATTAACT CTTCTTTTCTTGtgtgtaagtgcactttatagttttgatttccattgaag aatcatattctggtttttatgttattagatgctgttttagagttAGAGCT AGCCTGACGAAGAAATCCCTACATTAATGACTTTCTAATGAAAATTAATT CTGACATCAGTTATTCAAAATATTATATGATGTGtcgtaaattttcaaat ttaaaaaggtgTGGCACTTTCTACGAAATAGATATAAAgatgagattttt ttaaatcaatgcaCAAGTAAAAACAGAGGTTTTCTGCGCGAGAAGTGGAT ATAGGTTGTTGCCCCGTTAAGATATGCCTCTGattatttcttttgaaatc aaagtatttattattttattatttaaggTGCTTCAACACGTCAATTCATA CAAAGAGCAAGATATATAGTGATAACACAGTCAATGCTCTCCAATTTGAC GCTTATTGTGAAATGGCTTTTCCTTTAGCCTTTTGAGCTCTGTGCCAAGT CATGACACCCCCTAGGGAAATTTTGGGGGCTTTGTTTCATCATCATTTAA AAAGTCTGTATAGTGAATAGAGATAACTAAAATAAGATGTCAGAAGAAAT GGTGAATCTTTTTGGCAGTGGCAGTGACGACAGTAATGATAATAACATGT CATCACCTGAAAGAGGTGGTGACAATAATGAACAACAAGGTGACAATGAT GGCCCACATGAAGAAATGCAATCCACTCAATCACAAATGAAGGATTTATT TGGTGCAGAATCAGATGCTTCAAAAGATAGCAGTGACAGTatataatgtt tttaatttcaaagtTATATTAGATGCCATAAAATGAATAGAACCACAAAG TGCTCCAAAAATATATCCGGAAATAATGAAATTGCTGGGACAAAAGTTTC TTGGTACTGTTTACATATGATTAGAAATATTCAGAATAATAAAAAACATC GATGATCCTGGATAAGCTATTCTTCTTCAATATTCTcactttttcctatt ttttaccaaaaacaGTACTTTTTGGCATATCTTTCAAGAGTTGTATAATA CAACATACCATTTAAGTTTTCTTCTGAAACTGGTAATAGTGTTGTATATT GTTAGACTCTAGgtagaaaaataatgaaaactttaGGATTAGTTATGATG GATATAAATTCCATATAAATTCCCTCCTCTTTTTCTAGGTGCAACTAGTA GTGATGAAGGAAATGCAGCAGAACCAAAAGCTTCATCGGATGTAAGTAAA ACAAATTTGGTCTGAAAAGTTGCAATTTCAGCAATTTCTAATGGGTTCAT GTAGAAATACCATGTTCCTTCAAAAGAATCTATTAGTAATTTCCCTTTAA AAATACAGGAATAGATGGCTTCTGTTAAATAAAAACagaaattttccttt aaaaatacggataaataaaaatatttgggaaatttgtccaaaatacgatc tctcgcttaccagaccccttttttgAACGTGGTGTTGTATTTAtacggta caatatgaaatacagcatttatgtatgCGTTataagccaatcagattgct tatatttttcgTGTTGAtgataagcaaacgatatcactcttatttaaaaa caaaacctttaagcaaTTGAAATAAAAGCATTGAAATTTGAGTTCTCCCT TTAACAGCTATTTGCAGTAAACTTCCAAATTCTCACAAGTCAAATTCAAA ATGAGTATATAAATGCAGGGGTTGAAAAGATACTCAGACCCTTATAACCT CCATAAAAGTAGATGGGAAACGGggctaaattcaaaatttaattttaaaa ctgTAACCACAAGATATTTAACTCTGTAAACAAACTAAAAAACATATATG ATAGGTATTTCCAACCTGTTTTTATTACTATTTTGATTAATTTGTTAGCT TATTTTAGAAATTCATTAGGTCAAAAGAAGAGCTCAAAAGAGCGCCCATG ACACCTTTCTTTTTGCACATCTTTTATAATATGTCTTCATCTTTTTTGGG TCAATCTATATAGGAATGTCTCAATTCAGTCAAAAGTTCCTCAAAAGCTT TTCCAAGATGAGAAAAAGTCATTAAGTCTTGCTAATTGTTTGGTTTTTAT AACTACAAAAGTCTGTCCCTTGAACATTACTTTATACAACAGGTTAACTT TGATGAGCCAAAAGAGGAGAATAGCGACGAGGAAGGGCGTGACCCTCCAC AACAAGCAAGCAGTGACAGTGATAGTGACATGGGCATTGGAAGAAATAAA TCAAGTACAGGAGGTGGAGCCAGTGCTGCGCCCACCACTCAAGATCTTTT TGGTGAAGATGTCTCCTCTGACGAAGAAACTCAAGACAAAgtatgttttt ttcttgaacGTTTGAATTCGCTTCAATGGTCACACTTTCTTGCCTAATTG ATTCCGTCTATTATGTATGGCAAAATCATAATAATCCAAGCTGTCCCATA GGGGTTACCCATTAAACTATATGAAAATTATCCAACATGAGTTTGATATA ATCaggatatttctttacttttttgtaTTCTCTTAAATATTCTCTTCATA ATTTAGTTATTTGCATAATTGCTTCTTTGGCTGCCAAAAGATTACATTGA ATTATACTGAGCACATACAATTTTTGTCATTATTCTTTTTTCTACTAGCC ATCAACATCATTTCGACCTGATATATCACCTTTGTCCGGTGATGAAGATT CAATGAGGTTCAGTGAGAGGAGAATTCCAAGTCCTTCCAAAGACAAAGAA GATGAGGAAGAAGAAGACGAAGGTCTGTACACACCTCCTTTTTTGGCTAA TGTTGGctaaaattggctaaaattgGGATGTTCTCATTATTGTTTGCGAT TTTCAGACGGCGTTCGGTGCACGTGTTTCCGTTTAGCGAGATTCGGCTGC TCTCATTTTTCAAACATCAGGCTTGGATGCTCTTAAAAATTGACTCGAAA AGTACTTATAATCTTTGATTTGAGGCATGCATTGTTCTTAATTAGTTCTT AGGTTCTGGCCAAAATTAAGTCTTGTCATGTTCTCATTAAGCTATtctta aacaaatattttttgtatttgcACAATTTCCACCTATGAAtccagtgctg caaataacggccggtgaccggtaattaccggtcatttcGTAGTTTCTACC GGCCAATCTGAAGCTCAATctttcattttgtccggttaaaatttaAAGAC TAGAGGCTTAGATAAATACTTAATAAAGTTTCCAATTAAAAGAGGaatag attttgaattaatacaggtgtttagccaatctaaaCGTCATTTCAGACTT TTCTAATGGGGTTCTGCCAGACCCCCTGCTCAGACCCCCTGCTCAAATTA TTttcgttgcactcaaaatattaccggccaactgaaatttccttatttgc agcactggaATCAGTCAATGGAGGACTAATCAAGTAGGTCCAACACGTGT AGTGCAACAATTAATCTCAGTGTAATCAATGACTGAACTGAGATTTCGGA CTCAGAAATTTTGCTCTACCGAACGAGCTATGCAGTCTACTAGCGATGTA AAAGTCACGAGTTTGAATCTCACTCCAGCCCTCAGTCTACAAGTTCAAAT AACATTAAATTTAGATCTTTGCGCTGTGTGAATATTTTGGCTCTTTATCT ACAAATTCATTCAAAGTATCTCCTTAATCCAGCTCATAAAGAGCTTTTTT TCATTACCAAAAGGCTAAATAATTGATTGGATTGAATTGGATTGAATTCA TATATcactttattttcttgttttatttGTGCAGGACTCTCAATTTCCAT CGAGCTTCCACGCTGTAACATATCACTGGGTAAAGAGCTGTACTTCGTTA AACTGCCCAATTTTTTGAGTGTGGATACTAAACCATTCGATTCGAACTAT TATGAAGATATTTCATCAGATGAGGACGAAATCTTAGATGAAGAAGGAAG AGCTAGATTGAAACTGAAGGTAAAGATAAACGAAACAACTAAATAGAGAA AAGTGTTGAATTATCCTGGTTATAAACAACTGCTTTACAGTACAATACTC TATATTGAAGTAAAATACCTTCGTCATATATTTTtttcggcttcaaaaat cactggAATTAAGAAGATTGCTTTATGAAATTCGCTTCGTACATCTAAAT GACACTTCGTACTCCGGCCAATTTATTTGCAAGTTACAGTCAATGAAAGT GCCTCCAACTGATTTCAAAGCCACAATACCTATTGTAAAAGGGTGTAGGT AATTATCATCTTTTGTCTGAACAAACAAATTTTCAACTCTCTCCCTTTGT ACTTTTCAGGTGGAGAACACAATTCGCTGGCGTTACTCCAAAGATAAGGA TGGTGAAGAGATCAAAGAATCAAACTGTCGTTTCGTTCGTTGGTCTGATG GCTCGCTGTCCATGCATCTTGGTAACGAAGTGTTCGATGTCTTCAAAATG AAAGTCGACGGTGAACAAAATCACCTCTTCGTTCAACAGGTATGTGGTTG GATTTTCATAGGAAATTGTCTAATTAGATGTAAGTTGACTGGTTCGATGT CTTCAACATCCAGGTTCTAATGGCTTCACCAAAAGTAAAGTTACACTTGC TATAAAACCCTACTCCCAGTTCATGTTGTAAGCGAAAATCAATAAAAGTG AGTTTTATACTaatagtttgagtaaagaaaacNTTTTCTTGTTTTATTTG TGCAGGACTCTCAATTTCCATCGAGCTTCCACGCTGTAACATATCACTGG GTAAAGAGCTGTACTTCGTTAAACTACCCAATTTCTTGAGTGTGGATACT AAACCATTCGATTCGAACTATTATGAAGATATTTCATCAGACGAGGACGA AATCTTGGATGAAGAAGGAAGAGCTAGATTGAAACTGAAGGTAAATATGA ACGAAACAACTAAATAGAGAAAAGTGTTGAATTATCCTGGTTATAAACAA CTGCTTTACAGTACAATACTCTATATTGAAGTAAAATGCCTTCGTCATAT ATTTTtttcggcttcaaaaatcactggAATTAAGAAGATTGCTTTATGAA ATTCGCTTCGTACATCTAAATGACACTTCGTACTCCGGCCAATTTATTTG CAAGTTACAGTCAATGAAAGTGCCTCCAACTGATTTCAAAGCCACAATAC CTATTGTAAAAGGGTGTAGGTAATTATCATCTTTTGTCTGAACAAACAAA TTTTCAACTCTCTCCCTTTGTACTTTTCAGGTGGAGAACACAATTCGCTG GCGTTACTCCAAAGATAAGGATGGTGAAGAGATCAAAGAATCAAACTGTC GTTTCGTTCGTTGGTCTGATGGCTCGCTGTCCATGCATCTTGGTAACGAA GTGTTCGATGTCTTCAAAATGAAAGTCGACGGTGAACAAAATCACCTCTT CGTTCAACAGGTATGTGGTTGGATTTTCATAGGAAATTGTCTAATTAGAT GTAAGTTGACTGGTTCGATGTCTTCAACATCCAGGTTCTAATGGCTTCAC CAAAAGTAAAGTTACACTTGCTATAAAACCCTACTCCCAGTTCATGTTGT AAGCGAAAATCAATAAAAGTGAGTTTTATACTagtagtttgagtaaagaa aacgagtTTTCAGTCAATTTCATACTCCCATAGAATTTGCCAACTTTTTG GTTACAGAAACGGCTAGTTGATTGATTGACATTGAGATATCGACATAGCT ACCAAACAATGAATAAGTTTTTAAAAGGATATTTGTACAAGCTATATCAA GGGCGATGCCTTTATCAAAACGACAGTTTTACGACAGTTTTTAAATTCCT GGGCAGTTTTATTGTACGCCGTAGTTGTGCGTGTTCTTCTTAAAATGAAT CGAGGTTTAAACATTGTTTGTGAGGCGTCCTTTTAATCCTTACTTTCAAA GAACGAAAAGCTATTACAGTTTATAGAATGGTgctgaaattttccaaaga tattAAAGACTTGGTCTTTATTTTCCAGGGAACAGGTCTTCAAGCACAAG CTGTCTTCAAGAACAAACTCTCCTTCCGTCCTCATTCCACTACCTCTCAA ACACATCGAAAGATGACGCAATCTATTGCAGACCGTATGAACAAAGCACA GAAAGTCAAGATGATGCCTGCTATGGAAAAAGATCCTGAATCACAACGAG AATCTGCTTTGAAGGTAAAACCTATTCATAATATTTGCATCTTGTGGGCC CACTCCCTTTCTAAAGGAAGCGCTCTAACCTTTCCAAAAATCTATAATTA TTGTAGTAAAGAGTAAAAGAGGGTTAAGTAATAGGGGAGGGGTAGATTTT CAAAGGAAGGGATAggatttttagtatattttgtGATAATGTGCCATAAA GCTTGtttttttaaaggctttttattTTTAGCAGTAAATTTTTGTAAGAC TTTTAAGTTAATAAGTATGTGAAAAtattagaataaaaaatattgtcTTG AAAGATTGACTTGAAATGGGAGAAAAGGAAGATAAGCTAATTTTTAAAGG GCCCCTagatttcttgatattttcaatctctgttttttttttcaatgtag aAAGAAGACGAAAGATTACGAGCAGCTAACCGTCGTGAAAGTCAACAACG ACGCATGCGCGAGAAGAGCCATTTGAAAGGGTTATCGTCAGGTTATTTGA ATGACAATGATGATGACGACGGTTATGAGAACAGCATCGCTGCCATCAAA GCTGATTATAAAAGTAAGTATGATTAAGAAATATTAGGAATATACCTAAA AATACCTAGGTTTACTTTAAGGGAGCTAATTATTTCGCCGGAACTTTTTC GCTTTTTCGCGGTTTCTTTCCAAGAATTTAATTGATAATTTTCATGAAAC ATTAAAATTATCTTACGTAAATTTCCCTCTTCGCAAATACAAGAAATGTG CTTTATctaattttctttggaaaatacaaTAAGCATAATGAGTATTCCGC GCTTAAAAATAAACATAACGTTCGTGAATACTTTCTCCAAGATGAAAAAC GTTAACGTTAACAAAAGAAGGTCTTTCTGTAATCTAGTATTTAGTCTGTA CTTTCAgtaatttttaccatttttacaGAAGGGGTTCTTACCATAATGTA TTTAAAACCAGCTCAAACGTTACTATTTTTCTTTCTTGCAGATAAGAAAC GTCGACCATTAGACATTTACGATGACGACGAAGACGAAGAAAGTGAGGAC AGTGCAAAAGAAGATCGCCTTCGTAAAGCCAAACAACTGAACGATGACGA TGAGGATGACGACGGCGACGAATTTGATGCCGACACACGTCGTAAGAGAG ACGAACTTGCTACGCGCAAAAAGAAAGCTGGTCGGAAGATTATTGAATCA GATGAAGATTCGGATGCTGAGAGTGATTAAGGGTGATTATCGATGAATGA TGGAGCTCGTCCTACTTTTCTAGGGTGCTATCTATGATGTGCCTAATGTA TATAGCGGTCAGATTTTGTGTTATGACAGGTTTACCTtgagggctctgac catagtcggaaaattaattttagtatctgaacataaaagttatgttttag attctttaacacttttgacaaagaattgcctttataaattgctttttaat caaaccccttaagagtaattttaagaatttaattgcaaaaatgacattat caactttaaaaagacgttaataatatgttgcat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011735TCONS_00011735Clytia hemisphaericatranscript
TCONS_00011736TCONS_00011736Clytia hemisphaericatranscript
TCONS_00011737TCONS_00011737Clytia hemisphaericatranscript
TCONS_00011738TCONS_00011738Clytia hemisphaericatranscript
TCONS_00011739TCONS_00011739Clytia hemisphaericatranscript
TCONS_00011740TCONS_00011740Clytia hemisphaericatranscript
TCONS_00011741TCONS_00011741Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:491315..499797 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.59 20.77 45.41 47.4 65.43 49.48 42.25 45.07 35.86 35.81 24.96 28.95 20.09 23.38 24.68 28.5 38.86 29.69 10.72 13.28 23.97 23.33 21.03 23.43 27.23 32.25 11.69 7.82 13.63 15.13