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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011766 ID=TCONS_00011766|Name=TCONS_00011766|organism=Clytia hemisphaerica|type=transcript|length=3063bp GAACTAACAATGTCTTCATCGAGGCCTTCAGCAAGTCGTTTTTCAAGGTC CAAAAGCAAAAGACATGGTTGGATTCAACCATCAAGATGTCCAGTCGACG GTGAGGCCCTTGACACAAACAAGATTTTCACGGACACAGCGTTCCAGAAG CAGATAGAGGATGTGAAGATTATTTGTTGTTATTCATCGCATGGATGTTC ATGGGAAGGAACCATACAATCTCTTACCGAGCATAGAGAAGACTGTGAAT TCGTGAACGTGATTTGTGAGAAAGGCTGTGGAAGCACTTTACTCAAGTAT CAATTGGAATCGCACATTTGTTTGGACCCATCTACACCGTCACTACAACA AGAATTGGCACTTTGTAACTCAGCCTTCATGGAGAACGGAGAATTCGTGG ATGATCACGATTGCACGATGGAATCACGTCCAGGACCTGAGGGTGAATCT TCAAGAACAATGCCCACTTCTTCAGAGGAACCAGCATCGCCAAGTATTTC AGGAGATGGCGCttctttgaaattctgtaaatttatcaagcTGGGTTGTA AGTTCAAGGGAAATCGATTCGAGGTCGATTTACATATGGATATCGCTTCC GAGACACATTTAGATCTGGTCTGTAAATCTATCAATGAAATCAAAACAGA ATATATTAAGAAAGAAAACAAGGTGATAGCGAAACATGACAATAAAATTA AACTGGTGCAAGATTATATCTGTAAGCAGAATGTTGTTATCAAAGATCTT CACGAAACAAACCGTACGTTGGAAACGAACTCAAGAAATATGCAAAACCA AATCAAAGACTTGGCGTCCAAAACGGAGATGTTTATGGAGGAAATTACTC GCTTGAAAGTACAGGCCAATCAACTTCAAGAAGAAATGAATGAATCACGT GACACTAATTTCACTGGATCTCTTTTATGGAAGATTAAGAACTTTTCGAA ACACATGCAAAACGCAGTTAATAAAACGGAACTTTCAGTATACAGCCCAC CTTTCTTTACCAGTCGATACGGGTACAAAGTAAGGGCGCAACTTTTCGTA AACGGACTTGGCTCGCAAACAGGAGAGTACATGGCTATATATTTCCATAT TCTCCCTTCAGAACATGATGATATATTAAGATGGCCTTTCAATCACAAAA TCACTTTTTCTCTTCTCGAACAAACGCCAGACCAGACGAACGTGACGTAT ACTTTAGTGCCGACGCCGAACGAGGACAGTTATAAACGGCCTTCGGATAA AATGAGCGACGGAAAAGGTTTCAATCGATTCATTTCGTTGGACGCCCTGA AAAAAGGGAAGTACATTAAAAATGATTCGATATTTGTCAAAATTCGAGTT CATTGTAAAAATACGAGCAGGAATCACGAATCTTAGTTTTTTATCTAAAT TATCTTAACTTATCTTTTGTAAAATAGATTTTCAATCAATCGCTTTTTGA AGCCCGTCTCTAGTCGAATAAGCCATAGTTCAGGCGAAATATATGAAGTC ACTGAATAATTTCATGTTTTGAGAATTTCTTGGTTTCCTTCGGGAAAAAT GATGACGACAacttgaaagattgttttagCCAGATCGATTtgtctttttt tgactttctgtAGAATATCATCTTAAAATAGATCTATattaatattatat tataaGACTGTAAATTTACAATATAATATTTCTACGTTAAAGAATTATTC GATGCATTTGAACATCATCTTGAAAATTAAGAAGCACAATTGATCAATAG AAATCAAACTTCCGAAATCGCCTTGGAGAAAATACATGGAGTTATCTTCG ATATTCCAAGGAATGATCGAACTTCAGGGTTTAAGAAAACTATCACCATC CCCATATATTCACAATGCATAATCCATGATAATGCGCcaagaacaaagaa aatgtcttACTCAAGATTGCAAATAAAATTCAATAGTGAACTTCATTCCC GAGGATATTTGGACTTGTATGACAAATCCGTTTGCTCACACTAGCCAAAT TTATCATccaaaatatgttttcatgaTCGATCTTTTGCTTTGCGTCTATT AGTCGTTGGGTAAAATCGATGAGTCGTCGTAACGACATCAGCTTTGTCGT ACTTTCTGGCAGGTGGCAAAAATTCTTTCATGTTATCTTGAGGATATTTC TCCTTGATCTTTTGCCGTGTTCCGTACAGCTTCATATCATGACGTAATTT AAAGTAATCCATGACGTCATAAGCAATAAGGACAGTCAGTGCAAGAATGA CCAGAAGATCTTGAACGTCCatcctcaaaatgttctttcaGTGGAACTGC TCCAAACCATCAATCATTTTCTCCCTTTTTCCTTCAAATCGGTTTTGATA TCTTAATATTAAAAGTGATTTGATAAATAAAACCTTAATGTTAATCCTGG CCCACTAACCCCTGTTATTCCATTTAACCTAAACTGTGAAAACGTTCAGC AAACTGTATAATCAAGATAGGaactgtaaaaataaaactgaacGAATTGA TCACTTTCTTTCTTCGACCAAAAGTAAAACTTCAGCCATCGCCAATGTTT CCCAAAATTGTTTACCATTTTGATTTAAAGTTCCAGACTCATTtcttcaa gaaattgaaaacttgaaCTTCAAGAAATCTGATCAGAAAAGATCATCCCA AAAGTTTCTATATCATCTcataaaagaaattttgaattctCGTCTTATTT TGATGAAGTGAAGTGAGacaagaaaaaagagaaaaggaaGCATGAAAAAA CTGAGGTTTTGAAGAAAGGAAGACAAAAACACCTGCACCACTAACTAGAC TAGAAGTAGTTATCACTTTCatctcttttattttaaagtttatcatattt caacattttttaccAGTCTGAACTTCCACTTCCAAAACTGTTTACTTGTC CTAGCAGTATGAACTTAAAAACTGTAATAAATCGATTGATAATTGATGAA AAGAATTCCTACTTATCAATAAATTCCATTTGATTCGATGATGAATTTAC TTTAAATGGGCCCCACAGTTTGGGTGACAAAATGAAAGTTACGTCCCAGT ACACCAATTGAAA Run BLAST on NCBI transcript from alignment at sc0000132:221453..237442- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011766 ID=TCONS_00011766|Name=TCONS_00011766|organism=Clytia hemisphaerica|type=transcript|length=15990bp|location=Sequence derived from alignment at sc0000132:221453..237442- (Clytia hemisphaerica) GAACTAACAATGTCTTCATCGAGGCCTTCAGCAAGTCGTTTTTCAAGGTC
CAAAAGCAAAAGACATGGTTGGTAAGGATTTCGATACTCCAAGAGATTAT
TTTGTCAGCAACTTTGAAAACTAAAAAAAGCCTTCTGTTTTACGCACCTC
TGCTGGGTATATGGTCAGATGAAATGATCAAAAGATAAACTTTGATGGGA
TTGTGGTCATACTTAATTTAATCATTTTAATCGCAAATTGGCTTTGATGT
TTTTAGATATTTGTAGATGTGCTTTTTCCTAGCCATCGTGTAAACGGCAT
ATGCAAGGCATAAAATATTTTGCTTTCCATTGGGACATCAAAGTCATATT
GGTTTTCGTTTTAGAAATGTTTGATTTCTGAATCGGTTATTTTGACTAAT
GGAAAACCTTCAAAATTAAAAAACTATATTGTGATGCATTGCTTTAAACA
TATTTTTCTTTAATTTTCACAGGATTCAACCATCAAGATGTCCAGTCGAC
GGTGAGGCCCTTGACACAAACAAGGTAATCGTTTTCTAATCATCCATCGG
TCTGCTGTTGGATGTTTTTTTGCCACTACTATCATACCTTGGTAGTTTTT
GAGCGAAAAATGTCAAAGCATCTGATTATTCAATCAACCTGTTAACTTAC
TGCATTTTTCGAGACGACCGAAATGTGCAAATCTCACTTTAATTACTCTA
AGTCACTACTCTTAACGTCTAAGTCACTGAAACTACTTTTTGAAATTTTC
TCGAAATATCGAATTGTTCGAGCATGGTATCGATTTTTCTCACCACTAAC
GTCATTCAGACGCTATGTCCAAGACCCCTCCCCCACACCGGGAGCGTCCG
CCACCAAAAATCGATGAAATCATGATTTATCATGTTTTTTCTTTTCAAGT
TTTACGCTTTTTCTTAAGTATTTTCCAGTAAGTAAAAAAAGAACATCCGA
AAAACAAACAAACAAATCAATCACTCCTTTCTTAACTCTTCAAACCTACC
TATATCTTTTTTTACACGAACAAATTATCAATCTTTTTTTTGAAAATTTC
GAGAAAATGACGACAAAACTATGCTCAGCTAGGGTAGTTAGCAATTTAAT
CATCCTCGAAAATCGATGCTTATGATGGGTTTTCTTAGCGTCACTGCCTC
TGACCTCCTCGCGTCATTGTGACGTTAAAGTCGCAAACATCGATATGTGA
GTGACCCCTAAGACAGACTAAAAAGATAAAATTATGTCACAAAAGTTCAA
CATTTCCTTTAAATGTACACACAGTAAATATTGTAGTTCAAAAGGTGTAG
AGTGCGTTGAGTATAGTGCTTTGCGCAAGCTAGTAATAGTGAGATGTTAA
TAAGACGAGAGTCTTTTTAAAGCAACAGATCCGATAGTTTATCCCATGCT
AAGTCTACTGGTGCCATCTCAAGATTTAATCTTGTTACAATCAGAGAACT
GTTTTGAACGACAATTGGAAGCGGATTTTACACAAAAATGATTGATGTTG
CAATCTTAAGGTCTATGTAATAGAAAAGGTTGCTCTCTATGAAGTAGCTA
TCATCATTTGATTTTTGGCTACTGCACTTTAAATACCAATTCCATCCAAA
CTATTTATCATGTTTTCTCTTTGATATCTCAAGATGCACTTTCTTTAAAT
TCTTTTACATACGCAGGTTACACGATAAAGTTGAGAAATTTCAACCCTAA
AAACAGCGGGAGGATTTACGGTGGTAGTTTTTTCTTTTTGGTTTCCCACC
GCGCGACTTTTGGCATGCTGAGATTGTTTGCACTGATAGCGGAAGGCGGA
GAGTTTATGTAAACCTATCCATTTCTGTAAATAACTTTTACACAGTAGTT
TTGAAGTGAGAAGTCTGACTGATAGATGTGTGCGTTGACAGGTTAAACCT
CGCACACTACTAACGTTTTTATTAGAATCATAGGTGATCTGGGCTGTGTA
TAAAGATGCTCTCGTCTTTAGAACTTTTCCGTTTGAATTAGCATCATGTT
TATTTTTCGAGAGTACATTTGTTAGTTTTACTGTGATAGAACTGCGATAT
TCTGGTCCTTGCATATACATTGTTCTCATTTCCCACTTGTTACAGAATGT
TCATAGTTCTTATAAAAGTATTCCAGCGACAACAAAGAAGCTTGTTTCAT
TTCTCATCCTTCTCTATTTTCACCTGATTTGTGGCAACCGAGGAAAAATG
TTGGAAAAATAGAACACGACAGAACGCGATCGACAAATTAAGAACGGAAA
TCTTTTCTCATTATGAGCGTCAAAAATGATGATGGCTTGTTAAAAACACA
TCATCCTTTTCTTTCACCCTAATTAAGAGTTTATTTTTATTCTGCACATT
GTAAAAGCTACTAAGAAATGCTTGTTGCTGTTTAGTTAACGCAGACGTAC
ATCGAGTTGAAACGAGATGTCATTGCTTCGAATCAGAAAGGTTTGGCTTA
TTTCTCATCCATAATTTCAAGGCGTATTCCCTTCATTAGTCTGATTAGTC
AATTCAGAGAACCAAAATAAATGTTTTCTTGTTGGGAAATAATAGAGAGT
GCTTTTCTTCCATATTTTTTCTTCAGTATTTATTTGTTTGAATAAAGTTC
ATACACATCATGAAGTTTGAAATGAGTTTTTGATGTTAATACCTTGTGTG
TTGGATCGTGTCTTATTCACGAGGCAGTGCGTTACCTGAGTATCGTGGGA
AGACTTCAGTCTTTTTAGAGGTGCTTCTGTATTTAGATAAGCTTATGTAA
ACATCAGAAGCTTAAGAAAGTTTGTTTCCATAATAAAAGCATCCACCCTT
AAGCAGTTTAGTCAGGCGATGCTTTCTTTTGTTTGTTTTTTGGATAGTTA
TGAGAATCATTTTTGATGCAACCGGTTTTATTTTTCCTGTTCTTTACCAA
CACCCTTTCTCCAACACCACCCAACAATTTTTAAGAATTAGTTTCGGAAT
AACCAAACATCAGTTTGATCAATTCTTGTGTGGTCCGACTATATTCTCCT
TTTCTGCGAGAAGTTACCGGACTGGTGAGCAAGGCTACGAACTCAGTATC
ATGTTGATCCAATTCAACCTTTTTTTCCCTTTGTAACAAACAGAAAAATC
TGTAAACTCGTCTTTCTTCTCGTAGATTTTCACGGACACAGCGTTCCAGA
AGCAGATAGAGGATGTGAAGATTATTTGTTGTTATTCATCGCATGGATGT
TCATGGGAAGGAACCATACAATCTCTTACCGTAAGTCTCTTCATGTTCTT
AAGACAGTCCATTGGAAGGCTTTAAAGACACTTTCATTTATCTATCTGCT
AGACATCATCTTGACCCTTGACCAACCTCACGCCAGAACTGCGAAAATAA
AGACTTTTTGAAATGTTAACGTAAACCCTTAGCAACCAAAATATAGACGA
TGCATCGAAAATATTGACCACGAAAAATTCTTTTTCGCAGCCGGGGAAAT
TTCTTTTTGTTGAACAATTAGAATCGTTTTGAAATCTTTGCAAACGACGA
GCAGGTGGATTAGTTTTGGTGGACAGGATATTAAGAGTAATTACAAGTGG
AAGGTGGTTTTCGCTCAACGAAATGTTTGGAATTGGCTGCATTTCTTTGG
TTTCCTTCACACTCGATTACTGTTCGTCTCCATCGTGATAAGTACCTTCA
TTTCCTGTAAATGTAATCTTTCGATTGTCTTTTGAATTTCAAGTGAGAAT
TTTAACATTGCGATGGTGGAATCTTTACTTCGAACTTCTAATAAAATAAG
ATGACTCATTGAAAACTGGTGGAAGGTCATGTGGCAATAACATCATATAC
AATTTGTGTTTATCGTGCATTGTTACACAAACTAACAAACAAGCTGTAGT
GTGTTTTGCTTTACGAGAGATGGAAGAAGGCCGCGCCAAGTGAATCCAAT
TTTCAAGAGTTTGGTTAATTTTTGTTTTCCCACAAAATATACTTCTCTAC
AATTTTCTCACGGACAAGAAAATTTTGCTTTGCTATCGTTATTTAAGCCA
TCAAAATTACCTTATGTCGGAGAGGCCTTGTTAATTTGAGGCAACTCATC
TTTTCCTTCACCGATATTTGATTTTCGATTGAGATTACCCAAATAAGAAA
AGGGGTTGAACGCACGACGCAATGGGATTACTTGTAGCATGGTAATTGTA
AGTTAAGTTCAACCTCTTCTTAGTGTAGTTGGCTTAGGAGTTGAACGAGT
GCCAAGATTTCAAATCTATTTCCTTTTTGTGAAAAGTTTCTCTCCTCTCA
CGAAAATACGACACTTTTCAAATACAGCAAAAGTAACTTGTTTAAATCGT
TGTATTCTCAAAATCATTCTTCAATCTGATTTCCATTTCTGTTCATCCAG
TCAGTTTGTTGTGGCTGAGATTCTCTACTCTTACCTTTACATTGATCATG
TTTTTGAATCAGAAGAAAAAAGAATTTATCTGAGTAACCATTTATATTAA
TAACGGATCGGTCACCTAGCAATTAGTAATGATGAGAATTGATGGTCATT
GATTGGAAGTGGTCTTTACAAAACTCCTGCTGTTCTTAATCAATTCCATC
TGCAATGATGGTGAAGGGAAATAAGGAAAAGTGAAAAATAGAATCTTTTC
ATGATCTATTAGTTCAAGAGTGTAATGTTACTCTTTCTGTTGTTAATCAT
CAGTGTCAATTGAAATTGCTGTAGTAGAGGCTGCGTGTATTTTGAATTGT
GTGAGTCATGGGGAATTAGCTTTAGGTCTCAATTCGGATTAATACACAGT
GATTTTATCCTTTCGTGTATCTCATTTCGTCAGCAAAGTTCATTGAGTTC
ATGAAAAATTGTAAAAAGCTAAATTTGCGTGTAGTTGCGTGTTAAAGACT
ATTTGTTACACGAGAGACATGCAAGTGACGTGGAATTTCGAATGGGATTT
GATTTCTAGTATTTTTCACTTTAAAAAGCCACCAGCTTATAGGCCATTTC
ACAGTCGAAATGAATCATGGGTAATCAGGACTGATTGCGTCCTCGTAATA
ACGGCGTCCCGTTGACTAGACTCAAAAACATCCAAAATTTTAGACCAATG
GAAAGTCGTTATATACATAAGCGGTGGTACGGTGGTATTACCCATGATTT
CTTTCAGCTCTGAAATGGCCTATGTGGTTTTTATATATAAGAACAAACTA
TATAAGAACATAAGTCTTCGATGGCCAAAATATTAAGAACAAGTTAAGAA
CATTTTAAGGCTTTGCAGACTCCCAAACTAACTACCGATGTTTAAGCTTC
CTTAAACATCGGTATGATTATTGAATTGAATGGACAAAAATACTCACAAA
ATGGTGAAAATAAGAACATGTTAAGAACATTTTTAGGCTTGAAACTCAAA
AAGTTAAGAAGATCTAAAGGCTTATATAAAAAGCCTTATAAAAAAACGTG
TATGCGTAAATTTAAGTTTTTTTCTTCAAATTAAGCGCACTTGTTAACAG
ATAAAGCAGGATAAAGTGGCACGCGGATATTTTTACCCTGATGAATGAAA
GGCTGTCAACAAAAACACCAGAACTTCCTGTGGTGAATTCGAAACGAACT
GTTGACATTTTTCTTGCCCTCTTCACAGCGCATGGATGGTGCTCTTTGAT
GATAGTCCTCCTTTAAACAAGTGGTTTACGCTTTCTAAAGGGTGCTCTTT
ACCAAAAATCATGATTTTTCTGAACTAAGATAGATTACCTCACAGGTGTT
TATTATGCTTTTGGAGCTTGGTTTGAATTTTTTCAACTTTGTTTTTCGGT
ATCATTAACAAAGCATAACTTTCCTGAAAATTCTTCCGGTCATAAGTTTG
TAAGCCGATGTTATCATTAATTTGAGAAATTTCATATATCTTATTTTCTT
ATATCAACTCTTTTGTTAAATTGTTAAACATGGTCATTTTTTTCGGGGAA
ATTGTGCACCCCTAAGTAAGCAATGATGTATATTGTAACTATGGGATTCA
GGTCGTTAACAACAAACGCATCGAAAAGGGGGGAAATGGTAGCATTCTTT
CGAGCTGAAGAATAACAAAACACTTGAAGACTTCAAAAGATTTGAAATAT
AAAGTACACTTGATTACAATGTCTCGCAACGTCATTTGGTCTCCTCTTTA
CGACGTCTTGATAGAAGTTCAGTCAGTTCTCATTGTTCGTTTGCATTCAG
TTTACTTGTGGGCTGCTTGCAGATGGATGGGTTTATTTTATTTGTTTCTG
TATGAAACGTGATTTTTTTAACATTGATTATTTTTTTATGGTTCGCTTTC
ATTTTACGCTAAGCTTAATAAATTGAGTTGAATAATGTATAATACACCGT
CTTGTGTGCATACCACGAGTGACTTACTATAGGTATTTGTATTCACAAAT
GTCAAGCTCGCTTTCTGTTGCTTGTGGTCGGATATCCTTATCTTTCATGG
TAAGATCAAGAATGTCAGCTCGCGAAGGAAATGCTTTTTGCACTGAGTAA
CCAAAACGTCAGCAAATGCGATTTGAATTTTGACAGGTTTTTTGACCGCA
TAAAACCTCAGTGTTAACACATTGCTCAAACACTCCTCGAGATTGGTTCG
TAGGCGTTCAAAGAATGTTTCTCTCTCTTATTTTTAGAGTTAGTTGTAAA
GGTCTAAACCCATGAGGCTACAGATATATCGAAGAGCAGCGCTGATTATT
AAGCAACGATAATAAAACATAGATTGATTACAGGTCCCTGTAATGGTTAT
TGTATTCTAAAGATTATTTGAAATTTTGAAATTTTGAAATACATTCATTG
AAAGGGAAGATTTTGATGGAAGAGTTCTGATTGGTGCAATTGATAAGCCC
TAATGTGTGCGATATCTGATGCAATTGGAAACCTAGCTCTGAGAATTTAC
ACAAGATATTTTACAAAGGGGATGGGGAGGAGCTCTAGGACCTGTAATGT
GTTTGTTTATGGATTAAGACGCGCTACATCATGAAGAGATCACTTGAAAT
AGATTTCTGACCTTTCTTAATGAACTCTATTTGTTACTTGAGCTGTCGAT
GAATATTATTCGTAGTCTTTACTTGAGGATCAGCTCACAGTGGCTTTAAA
ATGACCTTTTTATCTTACTTTCATTATGTGGCATGACTTAAAAAAACGAG
TTCTAGTTCCTTCCCGAACCTGTATGAACTGGTCTTTTATACTTTTTCTG
AATGCTATTTTGAAAAAAACCTCTACGCATCAGTTTATAATCCTTTTTAA
TAGAATCAAACGGATTAAGGCAACGGCGACATTTGAATTGCTTTCAACTC
TCTCTTGCTCTCATTTATTATATACACTCAATGACAGAAAACCCTGTTCC
TTTTTCTTGAAACTTTTTCAAAAAAATAACGGACGACTTGAGATGATTTT
TGAATGATTTTTGAATTTTTATAAATACTTGGGTGGTTTTAACTGACGAG
TAATGGTTTGAGGAGATGTACACACCGTAATTGCGATTAAGAATACGATT
TTAAAAAGCTTTTTGAATGCTGGAGTGTGTTATGAGTAATACCAGTAGCA
TTGATATGTGCACCTTGATGGTAAGGTTTGATAGCCTCATTTTTGCTCAC
TACTCTTGCATTATCCGCTATATCCATTCGACAACTTTTAAGAAATTTTC
TTAATTTGCATTTTCAGAAGGGAACATATTTATTAGAGGGTTTGATTTTA
TATCAGAATTTACTTATCATTTCACTCAATGCTCTATTAACCTTCTCAAA
GTATATACACTGAATCTTCAAAAATGAAATTAAAAATAGAAATATTGACG
GATATCTACATCAATTAAAGCGTTTATAAAAAGTGTCTGTTTCCACGACG
ATAAAAATGACATCATCTTTTCATTAAAGTGACGTCATCTATTTTGATAA
CAGATAAAATATAGGATTTTGGAACAACAGAGATTAGATGATTCGCGCTT
TTGCATGTATGACCCGCGTTTATAATGTACTAACATTTCGAAATAACCAA
TAAATGAATGCGAAAATACCCCCTGTTAATCTACTGATATACTCTGTTTA
AAGGTGTATCGACAGGGGGTTAAATGATGACGCTATCTACTGTTTTCGAA
AACGATATAGCGCGCCAATGTCGACAGATGTTTCATTCGGGCTCTCAGTT
TGAACAATATATTTGCTTTCTTTCTTTCAAAATCATTTTTGTTTTGGCTC
TTTGTTCTTTATGATTTGCGATGGGTAAATCGCGTGCTGGAGATATCAAG
AACTACATTAGATATTCCTCATGAAAAAATCGATTTCTATTTTTCACTGA
TATTTTCAGGGTTTTAAGAAAAGATCCGCTTATATTTTATTCTATGTTTT
TCGTCTTTTCTCGAATAGTTTGGAACGAGGCAAATATTTTTTTAAAGCTC
GTGATTTTCATGTTGCTCACTGTTGATCTTTCAGGAGCATAGAGAAGACT
GTGAATTCGTGAACGTGATTTGTGAGAAAGGCTGTGGAAGCACTTTACTC
AAGTATCAATTGGAATCGCACATTTGTTTGGACCCATCTACACCGTCACT
ACAACAAGAATTGGCACTTTGTAACTCAGCCTTCATGGAGAACGGAGAAT
TCGTGGATGTAAGTAAAGCTTTAATGTATATTTAGTATGAGATGGTGGAC
TAATTTGCCAAATATGTTACTGGTACAACAATCACGTTGTAGAGTTTGAA
TCGGTCACATACTGGTGTATGTACCAGAGAAACTCACTTGCACCTCGCAG
CAGATTTTTAAAATCTCATTTTCAGTTTATTAAATTTAAAGCAAAGCTTA
ATTCTTATGCATCATCGCAAAAGCAAGCGCTATGATTCACGACTATTATC
AAGCCAGTGTTTATCTCCTTAATAAACAAACAAAGGGGTTATTGAGATGT
GCCTTCAAACCTCACCATTCGTCACTTACAAGTCAACTCGATTTCGCAAA
AGATTTCAAAGGATTTTCTTTGATACGTACTCGTGAATCAGCAAGGATAA
TCTAAAAAAAGTTTGTTTTAGTGGCCGCTATTTTGGACTCCTTGATGTTT
GTGTGCAAGAAGAGAGACTTTTTATGAAGAGTTGTTTATTCCTGCTCAGA
CAATATTTCACAATATCACGATGGATGTTTGGTGACGTCTTCGTCTTTTT
ACCGGCTGTTGTTTTTCTGAACAAGCTTCTGTTCCTTTTTTGATAATGGA
ACGAGGAAGGACCCCCTTGGTCGCTTACAAGGCGCCATATTGTGTCTTGT
TGTATGTCTCGTATGTTATACGATCGAATGATGTATGATTGATAAAATAA
AAAATATATGTGAAGTTTGTTTAGTATCATGTTCAGTCTTCTCATCTAAG
TTGTGAATCAATCTTTCTTTCGATCGGTCGATCGGTATCTACAGACGTTC
GATCATGCTGTGTGATCTTACGTTGATTCACCTTCGCAATAAGAAACAAA
AAATCCAGTTTTGCACAGTTTGTGTCAAGAGGAGAAATTGATTTTGGAAG
TCAAACAATTTATAACGTGGCAGAAGATTAAGAGGTGATTTTGGGGTAAT
CGATTTGGTACTTGAGTTTGTGACAGAGTGACTGCCTTTTTTTTGATTAA
GAGATTTACATTTTTAGTGAGTGTTGATTGAAGAATGAATGGATAAAAGA
AATTCGAGATGACAGCCTGCTTCATTTCTGTGATGATTGATTGCTTAGCT
TTCTATTCCCTTGCTTTTTGATGCAGGGATGCTTCGAGTGTTGAGGTCAA
GAGGATAGCTTATTTGTTTTTATTTTGTTCCGAATGTTGAAAAGATAATT
TTAAGTGTATATATAAAGTTGGTCAATCTCAGTTGAAGTTTGAATATGTA
AAAGAAAATGAATTAAAAATGACGAAAGCTAGATCGATTGACCTTCCATA
CCACATAAATAGTGAATGGAACAAACACCTACTTGGTGACGTCGACCATT
GCCAACTGAATTTCAACATTCACACTTTAGTTAGTTGCCACCTGATTCAA
TCGGAATTGAACGATTGCTAAATGTTGAAAGAAAGTCAAGGGAATATTTA
AGAGAACTTCTTTACGAGAAATTTTACTGTAATTTTCAGAAGATTTTTTA
AATAGATAGATGGTGAAATTACAAAGTAAGTAGCATCGACCTGAAATTAA
AACCTTTTTTTCTAAAAACGATGACCTGGCTTTTGATTACTGACATTTTA
AATGTTCAGTATTCTTTAACTTTCACGTCTCAAAAGCTAACTATCGCCAA
AAAGTCGTGACAAAAAAAAAAAGTTTACGGAAGTTTCGTGACGATTTTAA
GGAAAATTGAGGCTGCCAAGACAAACTTGGCGTATACAAAGAAACTTTGT
TTAGAAACGTGAAATATATTCACACTGCAAACATTGAAGGTTGGTACAAG
TAGAGATAAAGACTACTTCAGTTGGAGCCAGCATAGAATACAGTATGCTT
GAGTTCTAATCCAACTTATTCCATAGTACTTGAGCAAAAAGAGTCAAAAT
AAGTTCAGTGAATACTTATGTGAGAAATGGTAACAACTGATTCNGTCAAT
CTCAGTTGAAGTTTGAATATGTAAAAGAAAATGAATTAAAAATGACGAAA
GCTAGATCGATTGACCTTCCATACCACATAAATAGTGAATGGAACAAACA
CCTACTTGGTGACGTCGACCATTGCCAACTGAATTTCAACATTCACACTT
TAGTTAGTTGCCACCTGATTCAATCGGAATTGAACGATTGCTAAATGTTG
AAAGAAAGTCAAGGGAATATTTAAGAGAACTTCTTTACGAGAAATTTTAC
TGTAATTTTCAGAAGATTTTTTAAATAGATAGATGGTGAAATTACAAAGT
AAGTAGCATCGACCTGAAATTAAAACCTTTTTTTCTAAAAACGATGACCT
GGCTTTTGATTACTGACATTTTAAATGTTCAGTATTCTTTAACTTTCACG
TCTCAAAAGCTAACTATCGCCAAAAAGTCGTGACAAAAAAAAAAAGTTTA
CGGAAGTTTCGTGACGATTTTAAGGAAAATTGAGGCTGCCAAGACAAACT
TGGCGTATACAAAGAAACTTTGTTTAGAAACGTGAAATATATTCACACTG
CAAACATTGAAGGTTGGTACAAGTAGAGATAAAGACTACTTCAGTTGGAG
CCAGCATAGAATACAGTATGCTTGAGTTCTAATCCAACTTATTCCATAGT
ACTTGAGCAAAAAGAGTCAAAATAAGTTCAGTGAATACTTATGTGAGAAA
TGGTAACAACTGATTCTTTTGTGATTTGTGTTTGTCTGTTTTGTCATTTG
ACAAGTGATTGGAGCAAACCTAAACATCCGAATGAATCCATCAGTCAACA
AGATATGTGATCTCATGTATTTTATACCATAACCCTCGACTTTTTCTCTT
CGCTTCATATAGTCTCATACGCACACATGGCTTGTGATGTGCGGTCGATA
CATGGTTTTCTATTTTCGAATGGGTAGACAAGAAATATAGAAGGTTTTGA
GTTTGGTCAACAGTAGACTAGAGTAGTTTGAGAATATAGGACTCTTCGTT
GCTTTAGTGACTGTTACCTGACACTGTTATTATATTTGGTTCTTGTGAAA
ATATTTTTGTATGAAAGTATGAAAGAATTAAAAAACAAAACGGGTATGAT
TCGTTTACGAATGCAGAAATACATGGAGAGAATAAGCGGTGATGAAAGTG
CTGGTAGTGCTGGTGGTGGTGGTGCTGGTGGTGGTGGCAAATATTACGCC
AGTGAAACAATCACCGAAGAAAGTGAAAACGATATCGACGTAAGTTCATG
GTGTAAAGAAAGAAAGGAACTTGAACTCTTTTTTTACTTACTGGGGTCAT
TGAGGCTCAACCGGATTGTAATTTTACTAATTCTCATTTAATTTCTACTT
GCAGGATCACGATTGCACGATGGAATCACGTCCAGGACCTGAGGGTGAAT
CTTCAAGAACAATGCCCACTTCTTCAGAGGTAAGGGATGAAACTTGTGAC
GGATACCAAGGGATGATGTTTCCAAATAGGGTTGCAAATGGCCCCACACT
TCGAATGGTCTTTATAAGGATTACACTTCATCTTAACTCAATGAACAAAT
GAAACTTTTGAGGATGATGAGGTTCATTGACCACAAGGGGCGTTCTTTAA
CGTGCTTTATGAGATTTTTATGACCAACAAATGATTATAAATTTGAATTT
TTTTCTCATGATTTCCCATGGTATGGCTAAACTATGAATGGGTTTAGAAG
TATTGAGCCCTTCAACGTTATGATTACATGACATGGGCCTGTTCTGTACG
ATTTCTCTGTTGATAAATTTTTGTAAAAGAAGGTGGTTCAATTCCTTTTT
TGAAGTAAAATGTTTCTTAGGATTTGTCCGTACAATATCTTGTTTCAGTT
TTGAAGTTTGAAACTGAGATTAGGCCAAAGGGGAAAGATTCTTTCCTCTA
GGGAAACATAATCTTTGGGAAATATTTGAATTCTAAAGAAAGTTTATTTC
TCTTTTTTTCGTGAGCAGTGAAAAATATCATTTTTCGTTATGAAGGATGT
CAAAGTTTAAATCCCTTTTCTTCATCCATCCATCATCAATTCTCTTTTCC
ATTCTCATAATCGGTTGAGATACAACACAGATGTTTTGTGTCTTTCTTTT
TCCTGTTCCTCAACTGATAGTATACTGAGTATATCTTGTTCGAGCAAAAT
ATAATGTTCAAGAAACTTTTTTTCGGGATTTGCTTCAGGGTTGAAACATT
TTTTAACGTTTTTTTTTAAATTGCTCGATTAACTAAAGGAAACAAGATGC
AAAATAACGAACAAAAAGTAAAATCAACTTTGATATTTTCTGGTGTGAAA
TCATTATTTGACTGACTCTTGCTTTATTAAGTTATTGTACATATTAAAAT
CCCACTTCAATACAACAAAATTTGTACTTTTAAAGTAAAAAAGCCTTGTA
AGATTAAGAAAACAAACATTTTCGAAGATCGTATTCTTGATCCCATGTTG
AGATAACTTCGTTTGTTTGGATTTTCGTTTACAAAAAATCATTAAAATAT
CAGAAAAAAAGTTAGAATCTGAAGAAATTGCTTTTAACCTACTAAAATAA
AAAAGACTTACCTACGCACTTAAACGCCCCTTCATTCAAAATCAGTTTTT
TATCTGTTAATTTTGTTGACAATTGTTGAGATTCTGTCGCAATTTTAAGC
TATAGAATTATTATTCACGTACCATCTTCCTCCTGTGCAAGAAATTCATT
ACAATTCTTTTCCTTACCGTCAATAGGAACCAGCATCGCCAAGTATTTCA
GGAGATGGCGCTTCTTTGAAATTCTGTAAATTTATCAAGCTGGGTTGTAA
GTTCAAGGTAAGAAAACAACAGAAATTTCACTTTACAAATACTCGAGTCA
TGGTGAAAAAAATATTGACTAACCCAACTAGTCTAAGAATGTGTGACCAA
TGATGATTCTGTCACTTTTTTCGATCGAATCGAGATACGCTTACAATCAT
TATCTTCATTCTCTTCTTCCTTTTTATTATTCCAGGGAAATCGATTCGAG
GTCGATTTACATATGGATATCGCTTCCGAGACACATTTAGATCTGGTCTG
TAAATCTATCAATGAAATCAAAACAGAATATATTAAGAAAGAAAACAAGG
TGATAGCGAAACATGACAATAAAATTAAACTGGTGCAAGATTATATCTGT
AAGCAGAATGTTGTTATCAAAGATCTTCACGAAACAAACCGTACGTTGGA
AACGAACTCAAGAAATATGCAAAACCAAATCAAAGACTTGGCGTCCAAAA
CGGAGATGTTTATGGAGGAAATTACTCGCTTGAAAGTACAGGCCAATCAA
CTTCAAGAAGAAATGAATGAATCACGTGACACTAATTTCACTGGATCTCT
TTTATGGAAGATTAAGAACTTTTCGAAACACATGCAAAACGCAGTTAATA
AAACGGAACTTTCAGTATACAGCCCACCTTTCTTTACCAGTCGATACGGG
TACAAAGTAAGGGCGCAACTTTTCGTAAACGGACTTGGCTCGCAAACAGG
AGAGTACATGGCTATATATTTCCATATTCTCCCTTCAGAACATGATGATA
TATTAAGATGGCCTTTCAATCACAAAATCACTTTTTCTCTTCTCGAACAA
ACGCCAGACCAGACGAACGTGACGTATACTTTAGTGCCGACGCCGAACGA
GGACAGTTATAAACGGCCTTCGGATAAAATGAGCGACGGAAAAGGTTTCA
ATCGATTCATTTCGTTGGACGCCCTGAAAAAAGGGAAGTACATTAAAAAT
GATTCGATATTTGTCAAAATTCGAGTTCATTGTAAAAATACGAGCAGGAA
TCACGAATCTTAGTTTTTTATCTAAATTATCTTAACTTATCTTTTGTAAA
ATAGATTTTCAATCAATCGCTTTTTGAAGCCCGTCTCTAGTCGAATAAGC
CATAGTTCAGGCGAAATATATGAAGTCACTGAATAATTTCATGTTTTGAG
AATTTCTTGGTTTCCTTCGGGAAAAATGATGACGACAACTTGAAAGATTG
TTTTAGCCAGATCGATTTGTCTTTTTTTGACTTTCTGTAGAATATCATCT
TAAAATAGATCTATATTAATATTATATTATAAGACTGTAAATTTACAATA
TAATATTTCTACGTTAAAGAATTATTCGATGCATTTGAACATCATCTTGA
AAATTAAGAAGCACAATTGATCAATAGAAATCAAACTTCCGAAATCGCCT
TGGAGAAAATACATGGAGTTATCTTCGATATTCCAAGGAATGATCGAACT
TCAGGGTTTAAGAAAACTATCACCATCCCCATATATTCACAATGCATAAT
CCATGATAATGCGCCAAGAACAAAGAAAATGTCTTACTCAAGATTGCAAA
TAAAATTCAATAGTGAACTTCATTCCCGAGGATATTTGGACTTGTATGAC
AAATCCGTTTGCTCACACTAGCCAAATTTATCATCCAAAATATGTTTTCA
TGATCGATCTTTTGCTTTGCGTCTATTAGTCGTTGGGTAAAATCGATGAG
TCGTCGTAACGACATCAGCTTTGTCGTACTTTCTGGCAGGTGGCAAAAAT
TCTTTCATGTTATCTTGAGGATATTTCTCCTTGATCTTTTGCCGTGTTCC
GTACAGCTTCATATCATGACGTAATTTAAAGTAATCCATGACGTCATAAG
CAATAAGGACAGTCAGTGCAAGAATGACCAGAAGATCTTGAACGTCCATC
CTCAAAATGTTCTTTCAGTGGAACTGCTCCAAACCATCAATCATTTTCTC
CCTTTTTCCTTCAAATCGGTTTTGATATCTTAATATTAAAAGTGATTTGA
TAAATAAAACCTTAATGTTAATCCTGGCCCACTAACCCCTGTTATTCCAT
TTAACCTAAACTGTGAAAACGTTCAGCAAACTGTATAATCAAGATAGGAA
CTGTAAAAATAAAACTGAACGAATTGATCACTTTCTTTCTTCGACCAAAA
GTAAAACTTCAGCCATCGCCAATGTTTCCCAAAATTGTTTACCATTTTGA
TTTAAAGTTCCAGACTCATTTCTTCAAGAAATTGAAAACTTGAACTTCAA
GAAATCTGATCAGAAAAGATCATCCCAAAAGTTTCTATATCATCTCATAA
AAGAAATTTTGAATTCTCGTCTTATTTTGATGAAGTGAAGTGAGACAAGA
AAAAAGAGAAAAGGAAGCATGAAAAAACTGAGGTTTTGAAGAAAGGAAGA
CAAAAACACCTGCACCACTAACTAGACTAGAAGTAGTTATCACTTTCATC
TCTTTTATTTTAAAGTTTATCATATTTCAACATTTTTTACCAGTCTGAAC
TTCCACTTCCAAAACTGTTTACTTGTCCTAGCAGTATGAACTTAAAAACT
GTAATAAATCGATTGATAATTGATGAAAAGAATTCCTACTTATCAATAAA
TTCCATTTGATTCGATGATGAATTTACTTTAAATGGGCCCCACAGTTTGG
GTGACAAAATGAAAGTTACGTCCCAGTACACCAATTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00011766-exon-sc0000132-1575043694:237372..237442 | TCONS_00011766-exon-sc0000132-1575043694:237372..237442 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1575043694:236919..236970 | TCONS_00011766-exon-sc0000132-1575043694:236919..236970 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1575043694:234213..234317 | TCONS_00011766-exon-sc0000132-1575043694:234213..234317 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1575043694:228885..229058 | TCONS_00011766-exon-sc0000132-1575043694:228885..229058 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1575043694:225514..225588 | TCONS_00011766-exon-sc0000132-1575043694:225514..225588 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1575043694:224136..224216 | TCONS_00011766-exon-sc0000132-1575043694:224136..224216 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1575043694:221453..223957 | TCONS_00011766-exon-sc0000132-1575043694:221453..223957 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1510915933:237372..237442 | TCONS_00011766-exon-sc0000132-1510915933:237372..237442 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1510915933:236919..236970 | TCONS_00011766-exon-sc0000132-1510915933:236919..236970 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1510915933:234213..234317 | TCONS_00011766-exon-sc0000132-1510915933:234213..234317 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1510915933:228885..229058 | TCONS_00011766-exon-sc0000132-1510915933:228885..229058 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1510915933:225514..225588 | TCONS_00011766-exon-sc0000132-1510915933:225514..225588 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1510915933:224136..224216 | TCONS_00011766-exon-sc0000132-1510915933:224136..224216 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1510915933:221453..223957 | TCONS_00011766-exon-sc0000132-1510915933:221453..223957 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1491911889:237372..237442 | TCONS_00011766-exon-sc0000132-1491911889:237372..237442 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1491911889:236919..236970 | TCONS_00011766-exon-sc0000132-1491911889:236919..236970 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1491911889:234213..234317 | TCONS_00011766-exon-sc0000132-1491911889:234213..234317 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1491911889:228885..229058 | TCONS_00011766-exon-sc0000132-1491911889:228885..229058 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1491911889:225514..225588 | TCONS_00011766-exon-sc0000132-1491911889:225514..225588 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1491911889:224136..224216 | TCONS_00011766-exon-sc0000132-1491911889:224136..224216 | Clytia hemisphaerica | exon |
TCONS_00011766-exon-sc0000132-1491911889:221453..223957 | TCONS_00011766-exon-sc0000132-1491911889:221453..223957 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000132 | supercontig | sc0000132:221453..237442 - |
Blast
BLAST of TCONS_00011766 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.914e-40 Identity = 118/481 (24.53%), Postives = 232/481 (48.23%), Query Frame = 1
Query: 85 RCPVDGEALDTNKIFTDTAFQKQIEDVKIICCYSSHGCSWEGTIQSLTEH-REDCEFVNVICEK-GCGSTLLKYQLESHICLDPSTPSLQQELALCNSAF-MENGEFVDDHDCTMESRPGPEGESSRTMPTSSEEPASPSISGDGASLKFCKFIKLGCKFKGNRFEVDLHMDIASETHLDLV---------------------CKSINEIKTEY------IKKENKVIAKHDNKIKLVQDYICKQNVVIKDLHETNR----------TLETNSRNMQNQIKDL----------ASKTEMFMEEITR---------LKVQANQLQEEMNESRDTNFTGSLLWKIKNFSKHMQNAVNKTELSVYSPPFFTSRYGYKVRAQLFVNGLGSQTGEYMAIYFHILPSEHDDILRWPFNHKITFSLLEQTPDQTNVTYTLVPTPNEDSYKRPSDKMSDGKGFNRFISLDALKKGKYIKNDSIFVKIRV 1350
+C E++ +K+F D +++I ++I C S GC+ + + L H + DC F + C + C +L+ L H+ + + + + C S M + +D DC P S +T+ SE A S + S C F + GC F+G ++ H ++ H++L+ KSI + + I+++ +++ +++KI +Q I Q +K+L + R +++++ ++QN++ +L A T + +++R +++ L+ ++ E+ ++ G L+WKI+++ + Q AV LS+YS PF+T +GYK+ A++++NG G G +++++F I+ E+D +L WPF K+T L++Q + ++ P PN S+K+P+ +M+ G F++ L+ G YIK+D+IF+K+ V
Sbjct: 87 KCTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHV--EKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTL-LRSELSAHLSECVNAPST--CSFKRYGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLET--ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIV 560
The following BLAST results are available for this feature:
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