TCONS_00011766 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011766
Unique NameTCONS_00011766
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3063

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011766 ID=TCONS_00011766|Name=TCONS_00011766|organism=Clytia hemisphaerica|type=transcript|length=3063bp
GAACTAACAATGTCTTCATCGAGGCCTTCAGCAAGTCGTTTTTCAAGGTC
CAAAAGCAAAAGACATGGTTGGATTCAACCATCAAGATGTCCAGTCGACG
GTGAGGCCCTTGACACAAACAAGATTTTCACGGACACAGCGTTCCAGAAG
CAGATAGAGGATGTGAAGATTATTTGTTGTTATTCATCGCATGGATGTTC
ATGGGAAGGAACCATACAATCTCTTACCGAGCATAGAGAAGACTGTGAAT
TCGTGAACGTGATTTGTGAGAAAGGCTGTGGAAGCACTTTACTCAAGTAT
CAATTGGAATCGCACATTTGTTTGGACCCATCTACACCGTCACTACAACA
AGAATTGGCACTTTGTAACTCAGCCTTCATGGAGAACGGAGAATTCGTGG
ATGATCACGATTGCACGATGGAATCACGTCCAGGACCTGAGGGTGAATCT
TCAAGAACAATGCCCACTTCTTCAGAGGAACCAGCATCGCCAAGTATTTC
AGGAGATGGCGCttctttgaaattctgtaaatttatcaagcTGGGTTGTA
AGTTCAAGGGAAATCGATTCGAGGTCGATTTACATATGGATATCGCTTCC
GAGACACATTTAGATCTGGTCTGTAAATCTATCAATGAAATCAAAACAGA
ATATATTAAGAAAGAAAACAAGGTGATAGCGAAACATGACAATAAAATTA
AACTGGTGCAAGATTATATCTGTAAGCAGAATGTTGTTATCAAAGATCTT
CACGAAACAAACCGTACGTTGGAAACGAACTCAAGAAATATGCAAAACCA
AATCAAAGACTTGGCGTCCAAAACGGAGATGTTTATGGAGGAAATTACTC
GCTTGAAAGTACAGGCCAATCAACTTCAAGAAGAAATGAATGAATCACGT
GACACTAATTTCACTGGATCTCTTTTATGGAAGATTAAGAACTTTTCGAA
ACACATGCAAAACGCAGTTAATAAAACGGAACTTTCAGTATACAGCCCAC
CTTTCTTTACCAGTCGATACGGGTACAAAGTAAGGGCGCAACTTTTCGTA
AACGGACTTGGCTCGCAAACAGGAGAGTACATGGCTATATATTTCCATAT
TCTCCCTTCAGAACATGATGATATATTAAGATGGCCTTTCAATCACAAAA
TCACTTTTTCTCTTCTCGAACAAACGCCAGACCAGACGAACGTGACGTAT
ACTTTAGTGCCGACGCCGAACGAGGACAGTTATAAACGGCCTTCGGATAA
AATGAGCGACGGAAAAGGTTTCAATCGATTCATTTCGTTGGACGCCCTGA
AAAAAGGGAAGTACATTAAAAATGATTCGATATTTGTCAAAATTCGAGTT
CATTGTAAAAATACGAGCAGGAATCACGAATCTTAGTTTTTTATCTAAAT
TATCTTAACTTATCTTTTGTAAAATAGATTTTCAATCAATCGCTTTTTGA
AGCCCGTCTCTAGTCGAATAAGCCATAGTTCAGGCGAAATATATGAAGTC
ACTGAATAATTTCATGTTTTGAGAATTTCTTGGTTTCCTTCGGGAAAAAT
GATGACGACAacttgaaagattgttttagCCAGATCGATTtgtctttttt
tgactttctgtAGAATATCATCTTAAAATAGATCTATattaatattatat
tataaGACTGTAAATTTACAATATAATATTTCTACGTTAAAGAATTATTC
GATGCATTTGAACATCATCTTGAAAATTAAGAAGCACAATTGATCAATAG
AAATCAAACTTCCGAAATCGCCTTGGAGAAAATACATGGAGTTATCTTCG
ATATTCCAAGGAATGATCGAACTTCAGGGTTTAAGAAAACTATCACCATC
CCCATATATTCACAATGCATAATCCATGATAATGCGCcaagaacaaagaa
aatgtcttACTCAAGATTGCAAATAAAATTCAATAGTGAACTTCATTCCC
GAGGATATTTGGACTTGTATGACAAATCCGTTTGCTCACACTAGCCAAAT
TTATCATccaaaatatgttttcatgaTCGATCTTTTGCTTTGCGTCTATT
AGTCGTTGGGTAAAATCGATGAGTCGTCGTAACGACATCAGCTTTGTCGT
ACTTTCTGGCAGGTGGCAAAAATTCTTTCATGTTATCTTGAGGATATTTC
TCCTTGATCTTTTGCCGTGTTCCGTACAGCTTCATATCATGACGTAATTT
AAAGTAATCCATGACGTCATAAGCAATAAGGACAGTCAGTGCAAGAATGA
CCAGAAGATCTTGAACGTCCatcctcaaaatgttctttcaGTGGAACTGC
TCCAAACCATCAATCATTTTCTCCCTTTTTCCTTCAAATCGGTTTTGATA
TCTTAATATTAAAAGTGATTTGATAAATAAAACCTTAATGTTAATCCTGG
CCCACTAACCCCTGTTATTCCATTTAACCTAAACTGTGAAAACGTTCAGC
AAACTGTATAATCAAGATAGGaactgtaaaaataaaactgaacGAATTGA
TCACTTTCTTTCTTCGACCAAAAGTAAAACTTCAGCCATCGCCAATGTTT
CCCAAAATTGTTTACCATTTTGATTTAAAGTTCCAGACTCATTtcttcaa
gaaattgaaaacttgaaCTTCAAGAAATCTGATCAGAAAAGATCATCCCA
AAAGTTTCTATATCATCTcataaaagaaattttgaattctCGTCTTATTT
TGATGAAGTGAAGTGAGacaagaaaaaagagaaaaggaaGCATGAAAAAA
CTGAGGTTTTGAAGAAAGGAAGACAAAAACACCTGCACCACTAACTAGAC
TAGAAGTAGTTATCACTTTCatctcttttattttaaagtttatcatattt
caacattttttaccAGTCTGAACTTCCACTTCCAAAACTGTTTACTTGTC
CTAGCAGTATGAACTTAAAAACTGTAATAAATCGATTGATAATTGATGAA
AAGAATTCCTACTTATCAATAAATTCCATTTGATTCGATGATGAATTTAC
TTTAAATGGGCCCCACAGTTTGGGTGACAAAATGAAAGTTACGTCCCAGT
ACACCAATTGAAA
Run BLAST on NCBI

transcript from alignment at sc0000132:221453..237442-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011766 ID=TCONS_00011766|Name=TCONS_00011766|organism=Clytia hemisphaerica|type=transcript|length=15990bp|location=Sequence derived from alignment at sc0000132:221453..237442- (Clytia hemisphaerica)
GAACTAACAATGTCTTCATCGAGGCCTTCAGCAAGTCGTTTTTCAAGGTC CAAAAGCAAAAGACATGGTTGGTAAGGATTTCGATACTCCAAGAGATTAT TTTGTCAGCAACTTTGAAAACTAAAAAAAGCCTTCTGTTTTACGCACCTC TGCTGGGTATATGGTCAGATGAAATGATCAAAAGATAAACTTTGATGGGA TTGTGGTCATACTTAATTTAATCATTTTAATCGCAAATTGGCTTTGATGT TTTTAGATATTTGTAGATGTGCTTTTTCCTAGCCATCGTGTAAACGGCAT ATGCAAGGCATAAAATATTTTGCTTTCCATTGGGACATCAAAGTCATATT GGTTTTCGTTTTAGAAATGTTTGATTTCTGAATCGGTTATTTTGACTAAT GGAAAACCTTCAAAATTAAAAAACTATATTGTGATGCATTGCTTTAAACA TATTTTTCTTTAATTTTCACAGGATTCAACCATCAAGATGTCCAGTCGAC GGTGAGGCCCTTGACACAAACAAGGTAATCGTTTTCTAATCATCCATCGG TCTGCTGTTGGATGTTTTTTTGCCACTACTATCATACCTTGGTAGTTTTT GAGCGAAAAATGTCAAAGCATCTGATTATTCAATCAACCTGTTAACTTAC TGCATTTTTCGAGACGACCGAAATGTGCAAATCTCACTTTAATTACTCTA AGTCACTACTCTTAACGTCTAAGTCACTGAAACTACTTTTTGAAATTTTC TCGAAATATCGAATTGTTCGAGCATGGTATCGATTTTTCTCACCACTAAC GTCATTCAGACGCTATGTCCAAGACCCCTCCCCCACACCGGGAGCGTCCG CCACCAAAAATCGATGAAATCATGATTTATCATGTTTTTTCTTTTCAAGT TTTACGCTTTTTCTTAAGTATTTTCCAGTAAGTAAAAAAAGAACATCCGA AAAACAAACAAACAAATCAATCACTCCTTTCTTAACTCTTCAAACCTACC TATATCTTTTTTTACACGAACAAATTATCAATCTTTTTTTTGAAAATTTC GAGAAAATGACGACAAAACTATGCTCAGCTAGGGTAGTTAGCAATTTAAT CATCCTCGAAAATCGATGCTTATGATGGGTTTTCTTAGCGTCACTGCCTC TGACCTCCTCGCGTCATTGTGACGTTAAAGTCGCAAACATCGATATGTGA GTGACCCCTAAGACAGACTAAAAAGATAAAATTATGTCACAAAAGTTCAA CATTTCCTTTAAATGTACACACAGTAAATATTGTAGTTCAAAAGGTGTAG AGTGCGTTGAGTATAGTGCTTTGCGCAAGCTAGTAATAGTGAGATGTTAA TAAGACGAGAGTCTTTTTAAAGCAACAGATCCGATAGTTTATCCCATGCT AAGTCTACTGGTGCCATCTCAAGATTTAATCTTGTTACAATCAGAGAACT GTTTTGAACGACAATTGGAAGCGGATTTTACACAAAAATGATTGATGTTG CAATCTTAAGGTCTATGTAATAGAAAAGGTTGCTCTCTATGAAGTAGCTA TCATCATTTGATTTTTGGCTACTGCACTTTAAATACCAATTCCATCCAAA CTATTTATCATGTTTTCTCTTTGATATCTCAAGATGCACTTTCTTTAAAT TCTTTTACATACGCAGGTTACACGATAAAGTTGAGAAATTTCAACCCTAA AAACAGCGGGAGGATTTACGGTGGTAGTTTTTTCTTTTTGGTTTCCCACC GCGCGACTTTTGGCATGCTGAGATTGTTTGCACTGATAGCGGAAGGCGGA GAGTTTATGTAAACCTATCCATTTCTGTAAATAACTTTTACACAGTAGTT TTGAAGTGAGAAGTCTGACTGATAGATGTGTGCGTTGACAGGTTAAACCT CGCACACTACTAACGTTTTTATTAGAATCATAGGTGATCTGGGCTGTGTA TAAAGATGCTCTCGTCTTTAGAACTTTTCCGTTTGAATTAGCATCATGTT TATTTTTCGAGAGTACATTTGTTAGTTTTACTGTGATAGAACTGCGATAT TCTGGTCCTTGCATATACATTGTTCTCATTTCCCACTTGTTACAGAATGT TCATAGTTCTTATAAAAGTATTCCAGCGACAACAAAGAAGCTTGTTTCAT TTCTCATCCTTCTCTATTTTCACCTGATTTGTGGCAACCGAGGAAAAATG TTGGAAAAATAGAACACGACAGAACGCGATCGACAAATTAAGAACGGAAA TCTTTTCTCATTATGAGCGTCAAAAATGATGATGGCTTGTTAAAAACACA TCATCCTTTTCTTTCACCCTAATTAAGAGTTTATTTTTATTCTGCACATT GTAAAAGCTACTAAGAAATGCTTGTTGCTGTTTAGTTAACGCAGACGTAC ATCGAGTTGAAACGAGATGTCATTGCTTCGAATCAGAAAGGTTTGGCTTA TTTCTCATCCATAATTTCAAGGCGTATTCCCTTCATTAGTCTGATTAGTC AATTCAGAGAACCAAAATAAATGTTTTCTTGTTGGGAAATAATAGAGAGT GCTTTTCTTCCATATTTTTTCTTCAGTATTTATTTGTTTGAATAAAGTTC ATACACATCATGAAGTTTGAAATGAGTTTTTGATGTTAATACCTTGTGTG TTGGATCGTGTCTTATTCACGAGGCAGTGCGTTACCTGAGTATCGTGGGA AGACTTCAGTCTTTTTAGAGGTGCTTCTGTATTTAGATAAGCTTATGTAA ACATCAGAAGCTTAAGAAAGTTTGTTTCCATAATAAAAGCATCCACCCTT AAGCAGTTTAGTCAGGCGATGCTTTCTTTTGTTTGTTTTTTGGATAGTTA TGAGAATCATTTTTGATGCAACCGGTTTTATTTTTCCTGTTCTTTACCAA CACCCTTTCTCCAACACCACCCAACAATTTTTAAGAATTAGTTTCGGAAT AACCAAACATCAGTTTGATCAATTCTTGTGTGGTCCGACTATATTCTCCT TTTCTGCGAGAAGTTACCGGACTGGTGAGCAAGGCTACGAACTCAGTATC ATGTTGATCCAATTCAACCTTTTTTTCCCTTTGTAACAAACAGAAAAATC TGTAAACTCGTCTTTCTTCTCGTAGATTTTCACGGACACAGCGTTCCAGA AGCAGATAGAGGATGTGAAGATTATTTGTTGTTATTCATCGCATGGATGT TCATGGGAAGGAACCATACAATCTCTTACCGTAAGTCTCTTCATGTTCTT AAGACAGTCCATTGGAAGGCTTTAAAGACACTTTCATTTATCTATCTGCT AGACATCATCTTGACCCTTGACCAACCTCACGCCAGAACTGCGAAAATAA AGACTTTTTGAAATGTTAACGTAAACCCTTAGCAACCAAAATATAGACGA TGCATCGAAAATATTGACCACGAAAAATTCTTTTTCGCAGCCGGGGAAAT TTCTTTTTGTTGAACAATTAGAATCGTTTTGAAATCTTTGCAAACGACGA GCAGGTGGATTAGTTTTGGTGGACAGGATATTAAGAGTAATTACAAGTGG AAGGTGGTTTTCGCTCAACGAAATGTTTGGAATTGGCTGCATTTCTTTGG TTTCCTTCACACTCGATTACTGTTCGTCTCCATCGTGATAAGTACCTTCA TTTCCTGTAAATGTAATCTTTCGATTGTCTTTTGAATTTCAAGTGAGAAT TTTAACATTGCGATGGTGGAATCTTTACTTCGAACTTCTAATAAAATAAG ATGACTCATTGAAAACTGGTGGAAGGTCATGTGGCAATAACATCATATAC AATTTGTGTTTATCGTGCATTGTTACACAAACTAACAAACAAGCTGTAGT GTGTTTTGCTTTACGAGAGATGGAAGAAGGCCGCGCCAAGTGAATCCAAT TTTCAAGAGTTTGGTTAATTTTTGTTTTCCCACAAAATATACTTCTCTAC AATTTTCTCACGGACAAGAAAATTTTGCTTTGCTATCGTTATTTAAGCCA TCAAAATTACCTTATGTCGGAGAGGCCTTGTTAATTTGAGGCAACTCATC TTTTCCTTCACCGATATTTGATTTTCGATTGAGATTACCCAAATAAGAAA AGGGGTTGAACGCACGACGCAATGGGATTACTTGTAGCATGGTAATTGTA AGTTAAGTTCAACCTCTTCTTAGTGTAGTTGGCTTAGGAGTTGAACGAGT GCCAAGATTTCAAATCTATTTCCTTTTTGTGAAAAGTTTCTCTCCTCTCA CGAAAATACGACACTTTTCAAATACAGCAAAAGTAACTTGTTTAAATCGT TGTATTCTCAAAATCATTCTTCAATCTGATTTCCATTTCTGTTCATCCAG TCAGTTTGTTGTGGCTGAGATTCTCTACTCTTACCTTTACATTGATCATG TTTTTGAATCAGAAGAAAAAAGAATTTATCTGAGTAACCATTTATATTAA TAACGGATCGGTCACCTAGCAATTAGTAATGATGAGAATTGATGGTCATT GATTGGAAGTGGTCTTTACAAAACTCCTGCTGTTCTTAATCAATTCCATC TGCAATGATGGTGAAGGGAAATAAGGAAAAGTGAAAAATAGAATCTTTTC ATGATCTATTAGTTCAAGAGTGTAATGTTACTCTTTCTGTTGTTAATCAT CAGTGTCAATTGAAATTGCTGTAGTAGAGGCTGCGTGTATTTTGAATTGT GTGAGTCATGGGGAATTAGCTTTAGGTCTCAATTCGGATTAATACACAGT GATTTTATCCTTTCGTGTATCTCATTTCGTCAGCAAAGTTCATTGAGTTC ATGAAAAATTGTAAAAAGCTAAATTTGCGTGTAGTTGCGTGTTAAAGACT ATTTGTTACACGAGAGACATGCAAGTGACGTGGAATTTCGAATGGGATTT GATTTCTAGTATTTTTCACTTTAAAAAGCCACCAGCTTATAGGCCATTTC ACAGTCGAAATGAATCATGGGTAATCAGGACTGATTGCGTCCTCGTAATA ACGGCGTCCCGTTGACTAGACTCAAAAACATCCAAAATTTTAGACCAATG GAAAGTCGTTATATACATAAGCGGTGGTACGGTGGTATTACCCATGATTT CTTTCAGCTCTGAAATGGCCTATGTGGTTTTTATATATAAGAACAAACTA TATAAGAACATAAGTCTTCGATGGCCAAAATATTAAGAACAAGTTAAGAA CATTTTAAGGCTTTGCAGACTCCCAAACTAACTACCGATGTTTAAGCTTC CTTAAACATCGGTATGATTATTGAATTGAATGGACAAAAATACTCACAAA ATGGTGAAAATAAGAACATGTTAAGAACATTTTTAGGCTTGAAACTCAAA AAGTTAAGAAGATCTAAAGGCTTATATAAAAAGCCTTATAAAAAAACGTG TATGCGTAAATTTAAGTTTTTTTCTTCAAATTAAGCGCACTTGTTAACAG ATAAAGCAGGATAAAGTGGCACGCGGATATTTTTACCCTGATGAATGAAA GGCTGTCAACAAAAACACCAGAACTTCCTGTGGTGAATTCGAAACGAACT GTTGACATTTTTCTTGCCCTCTTCACAGCGCATGGATGGTGCTCTTTGAT GATAGTCCTCCTTTAAACAAGTGGTTTACGCTTTCTAAAGGGTGCTCTTT ACCAAAAATCATGATTTTTCTGAACTAAGATAGATTACCTCACAGGTGTT TATTATGCTTTTGGAGCTTGGTTTGAATTTTTTCAACTTTGTTTTTCGGT ATCATTAACAAAGCATAACTTTCCTGAAAATTCTTCCGGTCATAAGTTTG TAAGCCGATGTTATCATTAATTTGAGAAATTTCATATATCTTATTTTCTT ATATCAACTCTTTTGTTAAATTGTTAAACATGGTCATTTTTTTCGGGGAA ATTGTGCACCCCTAAGTAAGCAATGATGTATATTGTAACTATGGGATTCA GGTCGTTAACAACAAACGCATCGAAAAGGGGGGAAATGGTAGCATTCTTT CGAGCTGAAGAATAACAAAACACTTGAAGACTTCAAAAGATTTGAAATAT AAAGTACACTTGATTACAATGTCTCGCAACGTCATTTGGTCTCCTCTTTA CGACGTCTTGATAGAAGTTCAGTCAGTTCTCATTGTTCGTTTGCATTCAG TTTACTTGTGGGCTGCTTGCAGATGGATGGGTTTATTTTATTTGTTTCTG TATGAAACGTGATTTTTTTAACATTGATTATTTTTTTATGGTTCGCTTTC ATTTTACGCTAAGCTTAATAAATTGAGTTGAATAATGTATAATACACCGT CTTGTGTGCATACCACGAGTGACTTACTATAGGTATTTGTATTCACAAAT GTCAAGCTCGCTTTCTGTTGCTTGTGGTCGGATATCCTTATCTTTCATGG TAAGATCAAGAATGTCAGCTCGCGAAGGAAATGCTTTTTGCACTGAGTAA CCAAAACGTCAGCAAATGCGATTTGAATTTTGACAGGTTTTTTGACCGCA TAAAACCTCAGTGTTAACACATTGCTCAAACACTCCTCGAGATTGGTTCG TAGGCGTTCAAAGAATGTTTCTCTCTCTTATTTTTAGAGTTAGTTGTAAA GGTCTAAACCCATGAGGCTACAGATATATCGAAGAGCAGCGCTGATTATT AAGCAACGATAATAAAACATAGATTGATTACAGGTCCCTGTAATGGTTAT TGTATTCTAAAGATTATTTGAAATTTTGAAATTTTGAAATACATTCATTG AAAGGGAAGATTTTGATGGAAGAGTTCTGATTGGTGCAATTGATAAGCCC TAATGTGTGCGATATCTGATGCAATTGGAAACCTAGCTCTGAGAATTTAC ACAAGATATTTTACAAAGGGGATGGGGAGGAGCTCTAGGACCTGTAATGT GTTTGTTTATGGATTAAGACGCGCTACATCATGAAGAGATCACTTGAAAT AGATTTCTGACCTTTCTTAATGAACTCTATTTGTTACTTGAGCTGTCGAT GAATATTATTCGTAGTCTTTACTTGAGGATCAGCTCACAGTGGCTTTAAA ATGACCTTTTTATCTTACTTTCATTATGTGGCATGACTTAAAAAAACGAG TTCTAGTTCCTTCCCGAACCTGTATGAACTGGTCTTTTATACTTTTTCTG AATGCTATTTTGAAAAAAACCTCTACGCATCAGTTTATAATCCTTTTTAA TAGAATCAAACGGATTAAGGCAACGGCGACATTTGAATTGCTTTCAACTC TCTCTTGCTCTCATTTATTATATACACTCAATGACAGAAAACCCTGTTCC TTTTTCTTGAAACTTTTTCAAAAAAATAACGGACGACTTGAGATGATTTT TGAATGATTTTTGAATTTTTATAAATACTTGGGTGGTTTTAACTGACGAG TAATGGTTTGAGGAGATGTACACACCGTAATTGCGATTAAGAATACGATT TTAAAAAGCTTTTTGAATGCTGGAGTGTGTTATGAGTAATACCAGTAGCA TTGATATGTGCACCTTGATGGTAAGGTTTGATAGCCTCATTTTTGCTCAC TACTCTTGCATTATCCGCTATATCCATTCGACAACTTTTAAGAAATTTTC TTAATTTGCATTTTCAGAAGGGAACATATTTATTAGAGGGTTTGATTTTA TATCAGAATTTACTTATCATTTCACTCAATGCTCTATTAACCTTCTCAAA GTATATACACTGAATCTTCAAAAATGAAATTAAAAATAGAAATATTGACG GATATCTACATCAATTAAAGCGTTTATAAAAAGTGTCTGTTTCCACGACG ATAAAAATGACATCATCTTTTCATTAAAGTGACGTCATCTATTTTGATAA CAGATAAAATATAGGATTTTGGAACAACAGAGATTAGATGATTCGCGCTT TTGCATGTATGACCCGCGTTTATAATGTACTAACATTTCGAAATAACCAA TAAATGAATGCGAAAATACCCCCTGTTAATCTACTGATATACTCTGTTTA AAGGTGTATCGACAGGGGGTTAAATGATGACGCTATCTACTGTTTTCGAA AACGATATAGCGCGCCAATGTCGACAGATGTTTCATTCGGGCTCTCAGTT TGAACAATATATTTGCTTTCTTTCTTTCAAAATCATTTTTGTTTTGGCTC TTTGTTCTTTATGATTTGCGATGGGTAAATCGCGTGCTGGAGATATCAAG AACTACATTAGATATTCCTCATGAAAAAATCGATTTCTATTTTTCACTGA TATTTTCAGGGTTTTAAGAAAAGATCCGCTTATATTTTATTCTATGTTTT TCGTCTTTTCTCGAATAGTTTGGAACGAGGCAAATATTTTTTTAAAGCTC GTGATTTTCATGTTGCTCACTGTTGATCTTTCAGGAGCATAGAGAAGACT GTGAATTCGTGAACGTGATTTGTGAGAAAGGCTGTGGAAGCACTTTACTC AAGTATCAATTGGAATCGCACATTTGTTTGGACCCATCTACACCGTCACT ACAACAAGAATTGGCACTTTGTAACTCAGCCTTCATGGAGAACGGAGAAT TCGTGGATGTAAGTAAAGCTTTAATGTATATTTAGTATGAGATGGTGGAC TAATTTGCCAAATATGTTACTGGTACAACAATCACGTTGTAGAGTTTGAA TCGGTCACATACTGGTGTATGTACCAGAGAAACTCACTTGCACCTCGCAG CAGATTTTTAAAATCTCATTTTCAGTTTATTAAATTTAAAGCAAAGCTTA ATTCTTATGCATCATCGCAAAAGCAAGCGCTATGATTCACGACTATTATC AAGCCAGTGTTTATCTCCTTAATAAACAAACAAAGGGGTTATTGAGATGT GCCTTCAAACCTCACCATTCGTCACTTACAAGTCAACTCGATTTCGCAAA AGATTTCAAAGGATTTTCTTTGATACGTACTCGTGAATCAGCAAGGATAA TCTAAAAAAAGTTTGTTTTAGTGGCCGCTATTTTGGACTCCTTGATGTTT GTGTGCAAGAAGAGAGACTTTTTATGAAGAGTTGTTTATTCCTGCTCAGA CAATATTTCACAATATCACGATGGATGTTTGGTGACGTCTTCGTCTTTTT ACCGGCTGTTGTTTTTCTGAACAAGCTTCTGTTCCTTTTTTGATAATGGA ACGAGGAAGGACCCCCTTGGTCGCTTACAAGGCGCCATATTGTGTCTTGT TGTATGTCTCGTATGTTATACGATCGAATGATGTATGATTGATAAAATAA AAAATATATGTGAAGTTTGTTTAGTATCATGTTCAGTCTTCTCATCTAAG TTGTGAATCAATCTTTCTTTCGATCGGTCGATCGGTATCTACAGACGTTC GATCATGCTGTGTGATCTTACGTTGATTCACCTTCGCAATAAGAAACAAA AAATCCAGTTTTGCACAGTTTGTGTCAAGAGGAGAAATTGATTTTGGAAG TCAAACAATTTATAACGTGGCAGAAGATTAAGAGGTGATTTTGGGGTAAT CGATTTGGTACTTGAGTTTGTGACAGAGTGACTGCCTTTTTTTTGATTAA GAGATTTACATTTTTAGTGAGTGTTGATTGAAGAATGAATGGATAAAAGA AATTCGAGATGACAGCCTGCTTCATTTCTGTGATGATTGATTGCTTAGCT TTCTATTCCCTTGCTTTTTGATGCAGGGATGCTTCGAGTGTTGAGGTCAA GAGGATAGCTTATTTGTTTTTATTTTGTTCCGAATGTTGAAAAGATAATT TTAAGTGTATATATAAAGTTGGTCAATCTCAGTTGAAGTTTGAATATGTA AAAGAAAATGAATTAAAAATGACGAAAGCTAGATCGATTGACCTTCCATA CCACATAAATAGTGAATGGAACAAACACCTACTTGGTGACGTCGACCATT GCCAACTGAATTTCAACATTCACACTTTAGTTAGTTGCCACCTGATTCAA TCGGAATTGAACGATTGCTAAATGTTGAAAGAAAGTCAAGGGAATATTTA AGAGAACTTCTTTACGAGAAATTTTACTGTAATTTTCAGAAGATTTTTTA AATAGATAGATGGTGAAATTACAAAGTAAGTAGCATCGACCTGAAATTAA AACCTTTTTTTCTAAAAACGATGACCTGGCTTTTGATTACTGACATTTTA AATGTTCAGTATTCTTTAACTTTCACGTCTCAAAAGCTAACTATCGCCAA AAAGTCGTGACAAAAAAAAAAAGTTTACGGAAGTTTCGTGACGATTTTAA GGAAAATTGAGGCTGCCAAGACAAACTTGGCGTATACAAAGAAACTTTGT TTAGAAACGTGAAATATATTCACACTGCAAACATTGAAGGTTGGTACAAG TAGAGATAAAGACTACTTCAGTTGGAGCCAGCATAGAATACAGTATGCTT GAGTTCTAATCCAACTTATTCCATAGTACTTGAGCAAAAAGAGTCAAAAT AAGTTCAGTGAATACTTATGTGAGAAATGGTAACAACTGATTCNGTCAAT CTCAGTTGAAGTTTGAATATGTAAAAGAAAATGAATTAAAAATGACGAAA GCTAGATCGATTGACCTTCCATACCACATAAATAGTGAATGGAACAAACA CCTACTTGGTGACGTCGACCATTGCCAACTGAATTTCAACATTCACACTT TAGTTAGTTGCCACCTGATTCAATCGGAATTGAACGATTGCTAAATGTTG AAAGAAAGTCAAGGGAATATTTAAGAGAACTTCTTTACGAGAAATTTTAC TGTAATTTTCAGAAGATTTTTTAAATAGATAGATGGTGAAATTACAAAGT AAGTAGCATCGACCTGAAATTAAAACCTTTTTTTCTAAAAACGATGACCT GGCTTTTGATTACTGACATTTTAAATGTTCAGTATTCTTTAACTTTCACG TCTCAAAAGCTAACTATCGCCAAAAAGTCGTGACAAAAAAAAAAAGTTTA CGGAAGTTTCGTGACGATTTTAAGGAAAATTGAGGCTGCCAAGACAAACT TGGCGTATACAAAGAAACTTTGTTTAGAAACGTGAAATATATTCACACTG CAAACATTGAAGGTTGGTACAAGTAGAGATAAAGACTACTTCAGTTGGAG CCAGCATAGAATACAGTATGCTTGAGTTCTAATCCAACTTATTCCATAGT ACTTGAGCAAAAAGAGTCAAAATAAGTTCAGTGAATACTTATGTGAGAAA TGGTAACAACTGATTCTTTTGTGATTTGTGTTTGTCTGTTTTGTCATTTG ACAAGTGATTGGAGCAAACCTAAACATCCGAATGAATCCATCAGTCAACA AGATATGTGATCTCATGTATTTTATACCATAACCCTCGACTTTTTCTCTT CGCTTCATATAGTCTCATACGCACACATGGCTTGTGATGTGCGGTCGATA CATGGTTTTCTATTTTCGAATGGGTAGACAAGAAATATAGAAGGTTTTGA GTTTGGTCAACAGTAGACTAGAGTAGTTTGAGAATATAGGACTCTTCGTT GCTTTAGTGACTGTTACCTGACACTGTTATTATATTTGGTTCTTGTGAAA ATATTTTTGTATGAAAGTATGAAAGAATTAAAAAACAAAACGGGTATGAT TCGTTTACGAATGCAGAAATACATGGAGAGAATAAGCGGTGATGAAAGTG CTGGTAGTGCTGGTGGTGGTGGTGCTGGTGGTGGTGGCAAATATTACGCC AGTGAAACAATCACCGAAGAAAGTGAAAACGATATCGACGTAAGTTCATG GTGTAAAGAAAGAAAGGAACTTGAACTCTTTTTTTACTTACTGGGGTCAT TGAGGCTCAACCGGATTGTAATTTTACTAATTCTCATTTAATTTCTACTT GCAGGATCACGATTGCACGATGGAATCACGTCCAGGACCTGAGGGTGAAT CTTCAAGAACAATGCCCACTTCTTCAGAGGTAAGGGATGAAACTTGTGAC GGATACCAAGGGATGATGTTTCCAAATAGGGTTGCAAATGGCCCCACACT TCGAATGGTCTTTATAAGGATTACACTTCATCTTAACTCAATGAACAAAT GAAACTTTTGAGGATGATGAGGTTCATTGACCACAAGGGGCGTTCTTTAA CGTGCTTTATGAGATTTTTATGACCAACAAATGATTATAAATTTGAATTT TTTTCTCATGATTTCCCATGGTATGGCTAAACTATGAATGGGTTTAGAAG TATTGAGCCCTTCAACGTTATGATTACATGACATGGGCCTGTTCTGTACG ATTTCTCTGTTGATAAATTTTTGTAAAAGAAGGTGGTTCAATTCCTTTTT TGAAGTAAAATGTTTCTTAGGATTTGTCCGTACAATATCTTGTTTCAGTT TTGAAGTTTGAAACTGAGATTAGGCCAAAGGGGAAAGATTCTTTCCTCTA GGGAAACATAATCTTTGGGAAATATTTGAATTCTAAAGAAAGTTTATTTC TCTTTTTTTCGTGAGCAGTGAAAAATATCATTTTTCGTTATGAAGGATGT CAAAGTTTAAATCCCTTTTCTTCATCCATCCATCATCAATTCTCTTTTCC ATTCTCATAATCGGTTGAGATACAACACAGATGTTTTGTGTCTTTCTTTT TCCTGTTCCTCAACTGATAGTATACTGAGTATATCTTGTTCGAGCAAAAT ATAATGTTCAAGAAACTTTTTTTCGGGATTTGCTTCAGGGTTGAAACATT TTTTAACGTTTTTTTTTAAATTGCTCGATTAACTAAAGGAAACAAGATGC AAAATAACGAACAAAAAGTAAAATCAACTTTGATATTTTCTGGTGTGAAA TCATTATTTGACTGACTCTTGCTTTATTAAGTTATTGTACATATTAAAAT CCCACTTCAATACAACAAAATTTGTACTTTTAAAGTAAAAAAGCCTTGTA AGATTAAGAAAACAAACATTTTCGAAGATCGTATTCTTGATCCCATGTTG AGATAACTTCGTTTGTTTGGATTTTCGTTTACAAAAAATCATTAAAATAT CAGAAAAAAAGTTAGAATCTGAAGAAATTGCTTTTAACCTACTAAAATAA AAAAGACTTACCTACGCACTTAAACGCCCCTTCATTCAAAATCAGTTTTT TATCTGTTAATTTTGTTGACAATTGTTGAGATTCTGTCGCAATTTTAAGC TATAGAATTATTATTCACGTACCATCTTCCTCCTGTGCAAGAAATTCATT ACAATTCTTTTCCTTACCGTCAATAGGAACCAGCATCGCCAAGTATTTCA GGAGATGGCGCTTCTTTGAAATTCTGTAAATTTATCAAGCTGGGTTGTAA GTTCAAGGTAAGAAAACAACAGAAATTTCACTTTACAAATACTCGAGTCA TGGTGAAAAAAATATTGACTAACCCAACTAGTCTAAGAATGTGTGACCAA TGATGATTCTGTCACTTTTTTCGATCGAATCGAGATACGCTTACAATCAT TATCTTCATTCTCTTCTTCCTTTTTATTATTCCAGGGAAATCGATTCGAG GTCGATTTACATATGGATATCGCTTCCGAGACACATTTAGATCTGGTCTG TAAATCTATCAATGAAATCAAAACAGAATATATTAAGAAAGAAAACAAGG TGATAGCGAAACATGACAATAAAATTAAACTGGTGCAAGATTATATCTGT AAGCAGAATGTTGTTATCAAAGATCTTCACGAAACAAACCGTACGTTGGA AACGAACTCAAGAAATATGCAAAACCAAATCAAAGACTTGGCGTCCAAAA CGGAGATGTTTATGGAGGAAATTACTCGCTTGAAAGTACAGGCCAATCAA CTTCAAGAAGAAATGAATGAATCACGTGACACTAATTTCACTGGATCTCT TTTATGGAAGATTAAGAACTTTTCGAAACACATGCAAAACGCAGTTAATA AAACGGAACTTTCAGTATACAGCCCACCTTTCTTTACCAGTCGATACGGG TACAAAGTAAGGGCGCAACTTTTCGTAAACGGACTTGGCTCGCAAACAGG AGAGTACATGGCTATATATTTCCATATTCTCCCTTCAGAACATGATGATA TATTAAGATGGCCTTTCAATCACAAAATCACTTTTTCTCTTCTCGAACAA ACGCCAGACCAGACGAACGTGACGTATACTTTAGTGCCGACGCCGAACGA GGACAGTTATAAACGGCCTTCGGATAAAATGAGCGACGGAAAAGGTTTCA ATCGATTCATTTCGTTGGACGCCCTGAAAAAAGGGAAGTACATTAAAAAT GATTCGATATTTGTCAAAATTCGAGTTCATTGTAAAAATACGAGCAGGAA TCACGAATCTTAGTTTTTTATCTAAATTATCTTAACTTATCTTTTGTAAA ATAGATTTTCAATCAATCGCTTTTTGAAGCCCGTCTCTAGTCGAATAAGC CATAGTTCAGGCGAAATATATGAAGTCACTGAATAATTTCATGTTTTGAG AATTTCTTGGTTTCCTTCGGGAAAAATGATGACGACAACTTGAAAGATTG TTTTAGCCAGATCGATTTGTCTTTTTTTGACTTTCTGTAGAATATCATCT TAAAATAGATCTATATTAATATTATATTATAAGACTGTAAATTTACAATA TAATATTTCTACGTTAAAGAATTATTCGATGCATTTGAACATCATCTTGA AAATTAAGAAGCACAATTGATCAATAGAAATCAAACTTCCGAAATCGCCT TGGAGAAAATACATGGAGTTATCTTCGATATTCCAAGGAATGATCGAACT TCAGGGTTTAAGAAAACTATCACCATCCCCATATATTCACAATGCATAAT CCATGATAATGCGCCAAGAACAAAGAAAATGTCTTACTCAAGATTGCAAA TAAAATTCAATAGTGAACTTCATTCCCGAGGATATTTGGACTTGTATGAC AAATCCGTTTGCTCACACTAGCCAAATTTATCATCCAAAATATGTTTTCA TGATCGATCTTTTGCTTTGCGTCTATTAGTCGTTGGGTAAAATCGATGAG TCGTCGTAACGACATCAGCTTTGTCGTACTTTCTGGCAGGTGGCAAAAAT TCTTTCATGTTATCTTGAGGATATTTCTCCTTGATCTTTTGCCGTGTTCC GTACAGCTTCATATCATGACGTAATTTAAAGTAATCCATGACGTCATAAG CAATAAGGACAGTCAGTGCAAGAATGACCAGAAGATCTTGAACGTCCATC CTCAAAATGTTCTTTCAGTGGAACTGCTCCAAACCATCAATCATTTTCTC CCTTTTTCCTTCAAATCGGTTTTGATATCTTAATATTAAAAGTGATTTGA TAAATAAAACCTTAATGTTAATCCTGGCCCACTAACCCCTGTTATTCCAT TTAACCTAAACTGTGAAAACGTTCAGCAAACTGTATAATCAAGATAGGAA CTGTAAAAATAAAACTGAACGAATTGATCACTTTCTTTCTTCGACCAAAA GTAAAACTTCAGCCATCGCCAATGTTTCCCAAAATTGTTTACCATTTTGA TTTAAAGTTCCAGACTCATTTCTTCAAGAAATTGAAAACTTGAACTTCAA GAAATCTGATCAGAAAAGATCATCCCAAAAGTTTCTATATCATCTCATAA AAGAAATTTTGAATTCTCGTCTTATTTTGATGAAGTGAAGTGAGACAAGA AAAAAGAGAAAAGGAAGCATGAAAAAACTGAGGTTTTGAAGAAAGGAAGA CAAAAACACCTGCACCACTAACTAGACTAGAAGTAGTTATCACTTTCATC TCTTTTATTTTAAAGTTTATCATATTTCAACATTTTTTACCAGTCTGAAC TTCCACTTCCAAAACTGTTTACTTGTCCTAGCAGTATGAACTTAAAAACT GTAATAAATCGATTGATAATTGATGAAAAGAATTCCTACTTATCAATAAA TTCCATTTGATTCGATGATGAATTTACTTTAAATGGGCCCCACAGTTTGG GTGACAAAATGAAAGTTACGTCCCAGTACACCAATTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006608XLOC_006608Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011766-exon-sc0000132-1575043694:237372..237442TCONS_00011766-exon-sc0000132-1575043694:237372..237442Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1575043694:236919..236970TCONS_00011766-exon-sc0000132-1575043694:236919..236970Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1575043694:234213..234317TCONS_00011766-exon-sc0000132-1575043694:234213..234317Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1575043694:228885..229058TCONS_00011766-exon-sc0000132-1575043694:228885..229058Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1575043694:225514..225588TCONS_00011766-exon-sc0000132-1575043694:225514..225588Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1575043694:224136..224216TCONS_00011766-exon-sc0000132-1575043694:224136..224216Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1575043694:221453..223957TCONS_00011766-exon-sc0000132-1575043694:221453..223957Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1510915933:237372..237442TCONS_00011766-exon-sc0000132-1510915933:237372..237442Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1510915933:236919..236970TCONS_00011766-exon-sc0000132-1510915933:236919..236970Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1510915933:234213..234317TCONS_00011766-exon-sc0000132-1510915933:234213..234317Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1510915933:228885..229058TCONS_00011766-exon-sc0000132-1510915933:228885..229058Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1510915933:225514..225588TCONS_00011766-exon-sc0000132-1510915933:225514..225588Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1510915933:224136..224216TCONS_00011766-exon-sc0000132-1510915933:224136..224216Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1510915933:221453..223957TCONS_00011766-exon-sc0000132-1510915933:221453..223957Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1491911889:237372..237442TCONS_00011766-exon-sc0000132-1491911889:237372..237442Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1491911889:236919..236970TCONS_00011766-exon-sc0000132-1491911889:236919..236970Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1491911889:234213..234317TCONS_00011766-exon-sc0000132-1491911889:234213..234317Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1491911889:228885..229058TCONS_00011766-exon-sc0000132-1491911889:228885..229058Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1491911889:225514..225588TCONS_00011766-exon-sc0000132-1491911889:225514..225588Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1491911889:224136..224216TCONS_00011766-exon-sc0000132-1491911889:224136..224216Clytia hemisphaericaexon
TCONS_00011766-exon-sc0000132-1491911889:221453..223957TCONS_00011766-exon-sc0000132-1491911889:221453..223957Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:221453..237442 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.0994418 0 0 1.29029 4.56046 2.15577e-06 4.27259e-09 0 5.64998e-05 0.415415 0 0.772422 1.70755 5.34616 4.00923 0.000256634 2.14032 3.20655 0.122281 0 0 2.47844 2.05723 0.930798 6.72627e-06 5.17046e-05 0.00263037
Blast
BLAST of TCONS_00011766 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.914e-40
Identity = 118/481 (24.53%), Postives = 232/481 (48.23%), Query Frame = 1
Query:   85 RCPVDGEALDTNKIFTDTAFQKQIEDVKIICCYSSHGCSWEGTIQSLTEH-REDCEFVNVICEK-GCGSTLLKYQLESHICLDPSTPSLQQELALCNSAF-MENGEFVDDHDCTMESRPGPEGESSRTMPTSSEEPASPSISGDGASLKFCKFIKLGCKFKGNRFEVDLHMDIASETHLDLV---------------------CKSINEIKTEY------IKKENKVIAKHDNKIKLVQDYICKQNVVIKDLHETNR----------TLETNSRNMQNQIKDL----------ASKTEMFMEEITR---------LKVQANQLQEEMNESRDTNFTGSLLWKIKNFSKHMQNAVNKTELSVYSPPFFTSRYGYKVRAQLFVNGLGSQTGEYMAIYFHILPSEHDDILRWPFNHKITFSLLEQTPDQTNVTYTLVPTPNEDSYKRPSDKMSDGKGFNRFISLDALKKGKYIKNDSIFVKIRV 1350
            +C    E++  +K+F D   +++I  ++I C   S GC+ +  +  L  H + DC F  + C +  C   +L+  L  H+  + +    +   + C S   M   +  +D DC       P   S +T+   SE  A  S   +  S   C F + GC F+G   ++  H   ++  H++L+                      KSI  +  +       I+++ +++  +++KI  +Q  I  Q   +K+L +  R          +++++  ++QN++ +L          A  T +   +++R         +++    L+ ++ E+   ++ G L+WKI+++ +  Q AV    LS+YS PF+T  +GYK+ A++++NG G   G +++++F I+  E+D +L WPF  K+T  L++Q   + ++     P PN  S+K+P+ +M+   G   F++   L+ G YIK+D+IF+K+ V
Sbjct:   87 KCTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHV--EKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTL-LRSELSAHLSECVNAPST--CSFKRYGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLET--ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIV 560          
The following BLAST results are available for this feature:
BLAST of TCONS_00011766 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF34.914e-4024.53TNF receptor-associated factor 3 OS=Homo sapiens G... [more]
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