TCONS_00011938 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00011938
Unique Name	TCONS_00011938
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1808

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000134:182723..190102+
coding sequence from alignment at sc0000134:182723..190102+

transcript sequence

>TCONS_00011938 ID=TCONS_00011938|Name=TCONS_00011938|organism=Clytia hemisphaerica|type=transcript|length=1808bp
NNCCAGCCACAACAATAGTAGCAACTCCAAGTCAATCAGTTGTGACACCA
ACAAGCTCAGCTGTCGTCGTAGGTTGGTCACAATGGAGTGAATATGGATC
TTGTAGTGTGACATGTGGTGAAGGTCAAGAAGTGAGCACAAGAACATGTC
CGAAATCACCTGCGTCCGAATTTTGTCCGGGTTCATCAAGCCGATTCCGT
GTCTGCAGCAAAGAAAGATGCATAAAAACGTGTAATGATATAGTTTGCAC
AAAGAAGCATACAGAGTGCAAACAATACAATGTGACACGTGATGCCGCAT
GCGTGTGTAAAGATGGCTTCTATTTGGATTTTAAAGACCGTTGTAAAACA
ACaccaattattttcaaattacgTATAAGATTTACAATGCCATTCCTTGC
GTACTTGTTCGATCTACTGAACGACTTAACCGTGNACTAGCAAACAACGC
AACTGAATCATTGTACATTTATAACCCAACACCTCCAGATATCAACACTG
CTATCATGAACATTAACGCTACTGATGTTTGCGACATTGGGACATCAGAT
TGTGATCCTAACCGATCAATGTGTGTTATGAATGATGACGAAGATAGTGA
TTTTTACAGTTGCAGTTGTAGTAATGGATACTTAAGTAACTCCACAACAC
AGTGTTTGGATTACTGTGAAAAGGGCGTCGATGATTGTGATAAAACATCT
ACTAACTGTACGGCAACTCCAGGCATATTACCACATTATAAATGTGAATG
TAAGCTTGGTTATAATAGGAAAGACAATACTACGTGTGTGTTGCCACCGA
CTGGAGAACCAACTACTGGCACGACTGATGatGACGATATCATAATCATC
GTAGTTGTCGTGTGTTCACTTACCTTGTTCTTCCTACTCATCCTGGCTAT
CTTCTTACGATATCAACGCGATCGCGACGATGAAGTAGGCCAAGACATCG
GTGGTGGCGCCGCATCATCGTACAGAATCAAGAATCCAAACGAATCGCCG
AACCCAGGGATGTATAGAAAATCGGTCAAGTATGACGATATCGATATAGG
ACATGGAGGACCATCTGCTGGCGGATCGCGACAGGAACTTGGCGACATAC
CTGATTATTAAggagaaaataaataatttaaatgaatttgatacaacaat
ttcttaggaaaatgtaTTAGAATTCAGATAGCTTAGAGATTGGGTTTATT
TTGGTGAGCTATTTTCCTTCTCAATAACGCTAGTTTTAAGGATTCTTTTC
TCGAAAGGGCTAATTTTTGCTCAAAAGAGTTTTTTGTTCATAATTGAAGT
ACTGGAAACTTTCAAACCATAAAACCATAATAGCCATTTATTGGGGGAAG
ATGACAAAACTCGCAAACTCATTATTATTTTGTAATTTGTAGCCACTGTA
GTTTATTTATTGTGTAGTTTACTGTAAATTTTAGTCTTGATTAAACCCGT
CATCAAAGTCGCTTATCTTTAAGGACAATACCTTTCTTACATAGAATCTA
GCGTTCAAGTTTAAAAAGTTCAGATGGACAAAGCACAACGGCTTTTGTAA
TAGAAACTTTTCGATCATTTATTCAAAACATGTTATGTTCATGGCTTGAG
CTCTAATTTAGACGGGCTCGTTTAATAATTCGAATGGGAGGGGGTAAGAC
TAAAAGTCGTCTTATTAAGAGCTGAGAGGCATTTCTTACCAATCCCTGAA
TGTGTTATCTCCATCTGTCACGTGGTCTCTGTAAGAGTTCAAATATgatt
tttgtttgttattttctttttgcactgaaattaaaaaaaattattgttgt
AAATTGTT

Run BLAST on NCBI

protein sequence of TCONS_00011938-protein

>TCONS_00011938-protein ID=TCONS_00011938-protein|Name=TCONS_00011938-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MNINATDVCDIGTSDCDPNRSMCVMNDDEDSDFYSCSCSNGYLSNSTTQC
LDYCEKGVDDCDKTSTNCTATPGILPHYKCECKLGYNRKDNTTCVLPPTG
EPTTGTTDDDDIIIIVVVVCSLTLFFLLILAIFLRYQRDRDDEVGQDIGG
GAASSYRIKNPNESPNPGMYRKSVKYDDIDIGHGGPSAGGSRQELGDIPD
Y

Run BLAST on NCBI

transcript from alignment at sc0000134:182723..190102+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00011938 ID=TCONS_00011938|Name=TCONS_00011938|organism=Clytia hemisphaerica|type=transcript|length=7380bp|location=Sequence derived from alignment at sc0000134:182723..190102+ (Clytia hemisphaerica)
NNCCAGCCACAACAATAGTAGCAACTCCAAGTCAATCAGTTGTGACACCA
ACAAGCTCAGCTGTCGTCGTAGGTAAGATAACTTGATTGATTATCAATTT
GAAGCGAGATGAATAATCGTATACAAATATTTTAGGATCTTTAACCGATA
GTATAATAATTACGATCGTAATTGCGAAcgagcaaaaattaaaaaaaaaa
caatattggttctcaacttcagttgagcaagaatctcagaatgtttttgt
ttgtatGTCCGCAAACTTTGATACTGCGTAGAGAGCGGAATAATTGATTT
ACGGAGCTGAAATTTCTCACACACATTCCTTAGGTTGAAACTTACTTTat
caatttcattaatttgtCGCAACAgtaattaacgtctaacggtcCACTAT
TTTGACTATACATTTTCTATCTGATTATTTAGGTTGGTCACAATGGAGTG
AATATGGATCTTGTAGTGTGACATGTGGTGAAGGTCAAGAAGTGAGCACA
AGAACATGTCCGAAATCACCTGCGTCCGAATTTTGTCCGGGTTCATCAAG
CCGATTCCGTGTCTGCAGCAAAGAAAGATGCATAAAAAGTAAGTTTGTTT
GTTCTTGATATGGACAGACCGAGAAAAGTGGATTTACATGTAAACTTACT
CCTTGGGGTttcgctaattaatttttgggaaaatgtttttttgccctaat
tctgctttATTAGActcctttcaaaaattttgtcactCAGAAccttttta
ttccaaccccccccccacttattaagttttgatgattttttcaccCAGCC
CGCGTATTCCAAACAAcccgtttattaggtacccgagagtatgccCTTAA
TCCACATGAATAGAAGTTTCTATCAAACTTTAAGGCAAAACAACCAGTCT
TTTAATTAACTTAACTGCACTTTTTTTATAGCGTGTAATGATATAGTTTG
CACAAAGAAGCATACAGAGTGCAAACAATACAATGTGACACGTGATGCCG
CATGCGTGTGTAAAGATGGCTTCTATTTGGATTTTAAAGACCGTTGTAAA
ACAACaccaattattttcaaattacgTATAAGATTTACAATGCCATTCCT
TGCGTACTTGTTCGATCTACTGAACGACTTAACCGTGNACTAGCAAACAA
CGCAACTGAATCATTGTACATTTATAACCCAACACCTCCAGATATCAACA
CTGCTATCATGAACATTAACGGTACCGTCTTATGTTTCAATTAcagacgc
tctctaattcgatcttcaagggggattggattttcatcgaataaggtagc
ttatcgaataaggggacgtcgtttatgagagtttcttgttgacggggact
ttcaatttcatcgaataagagagcctattgaatagtagaacgtcgaatta
tagagagcgtcaactgtattaatATAGCTTCCGTCTTTAACCAAAGTCCA
Accatctacaatcatggtcgtaatcttttagaaaaaaaagaaattccacg
aaTTTTCAaagccacaaacgatttggaagtgctctaagttaggttggaag
ggtagagtttcaACTCTGagtttaacgctagacttaacacttaggacctt
aggatccaaaagttcaaaaatggttcaATAAGGCTCAGTATATAGCCtag
aagtctataaacccgtgccaaattgaaatatccgattaaattaaagcaga
tgagctggagtttttataagatacattaataattggtcatttgaggtggt
agagatgacgcgttctttagaaaaaagtaacaaaagtgTTAAAgttaaga
gcttgtaaaaactccatctcgtcccaattaaagagatggcccaaaatcga
ctttctcgcccgaactccaaatttcgaaaaacgaggaaataagctagatt
ttgaccatgattgtacacgttttttatgtaAGAGTATCTAAGGTTTTATG
TCagagtttgaagtttttgatttttttttgttgcgCACTTGAAAGGTTAA
GTCATTTGACTCTAATAAGCTAGTATCAAATCATTTTACATTTTGAGAGT
GTGCATACGAGTattcaaacttcagtcccactctCTCTATTTATAAGAAC
GATTTAATTTTGGTTGAGTCTTGGCTGTGTTgtaataggccttttcataa
actGCGTCACGAAcaacacttgcctcgttttgaaacgaTTACCATAAGGT
GATTATCTCCATTGAGACCTTAAATCATACTTATATGAAAAGAGTGTACT
TCTAAGAAAATTCGTTGGGAATAAGTTGTCAtagaattattttgaaaact
aGGCAAacgttgctcgtgacgtaatttatgaaaaggcctattctTTTTTG
GTACTTTTAGCCTCGTGGCTCTTATAAAGTTCTTTTGATATAACAAAAGA
GTGTATTACATTCATATTCTATGTCTTATCAATTTAGCTACTGATGTTTG
CGACATTGGGACATCAGATTGTGATCCTAACCGATCAATGTGTGTTATGA
ATGATGACGAAGATAGTGATTTTTACAGTTGCAGTTGTAGTAATGGATAC
TTAAGTAACTCCACAACACAGTGTTTGGATTACTGTGAAAAGGGCGTCGA
TGATTGTGATAAAACATCTACTAACTGTACGGCANTTACTGTGAAAAGGG
CGTCGATGATTGTGATAAAACATCTACTAACTGTACGGCAACTCCAGGCA
TATTACCACATTATAAATGTGAATGTAAGCTTGGTTATAATAGGAAAGAC
AATACTACGTGTGTGTTGCCACCGACTGGAGAACCAACTACTGGCACGAC
TGATGGTAagaaaagttattcaaaatacatgaaaatctaaaatttgtata
ctttaaaagtttttcaagtttttaagaCAACACTcgtgaaattttattca
aattttcaactcttttagagcaatcttaggtcaatttgcctgactacCCC
CCGCCCCCGGATAATAAACTTGTGCTTCTAGATCATTTGGTTTtctttaa
caaataaaaatcGAACTCTAAAACTTTAAAGATTAcatcaacggattaga
ataggtggattaagaactcatagaaaacactcctcgttaggttatcaaac
ttttttacgagtttgctagcaattaaaacttgataagttgtaANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGag
tgcgcagagtcatttacagatttttcttgtaacaatgagaagacaatgga
tctctcttgggagcaacgagagaagttaatccacctattctaatccgttg
attACATAAAATACAATTCCCATTTTCGTTTGTTagttgtgatttgattg
gttcggGCCACATCCAAGGTCCTTTTTATCGAACATGGTTTATACTTTTG
TTCTCGTAGAATGCAATCTTTTCTCACAGTGTATATTCATAAAGTGCAAT
ACTATTTGTATTACACTTCATCATAGTATTTAGAGTACATTATACAGGTT
GCAAAACTAAAGTGTGAAGACAAATCTCGTTTTTACTCAAAATgtttaca
gtatgtggcccccaaaacggcgatcaaatttgaaatttctctcaaatcta
gaggaaaagagattttacaaaaatttttgctgcatgaaaacctttaacat
ctctactttatttcctagtagttctttttcaaaattttcaattttaacaa
tatttttcaatcgcttaaagataggtagcttttttctaatggcccctaaa
acggaggtttgaaattttagcgatttctcgagatatctttaagatatgaa
tacaaaattttgaccatagttttgaaatatgatttagagggttttgggca
taaatttatttgataaaagttttacAGTATACCTCTGGTTGTCAAAAttc
aggtttggggcccccaaaacggaggtgtagttaaaatcaaattattaagc
caagtggtaatagggggaaaaactataatgaacatatttgtgtttcccct
taaatttacgaccccgatggatgtaaaatttatggtttttatgaaatatt
tcaagattttcgatattgcaaagtccagactgaaaatttagagattttca
aaatgacatttttgatttaagggctctgaccatagtccaaaaattgattt
tgtatttgaacataaaagttatatttcaggttccttaacacttttaacaa
agaattgcctttataatttgctttttaatcgaatcccttaagagtaatta
agaatttaattgcaaaaatgacgttatgaactttaaaaagatgttaataa
tatgttgcatcaccctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgttgcatcaccctc
ttttacaaaaagtgcttagttttaatgggtaattaacttttttgtttcaa
aatttctttacactgtccgcaaagaattgaactattttaaattttgcgga
aaatttttctaaaaagatgggtcaaaagttatgactgttttttaaagcaa
aatccagatgaaaaattgatgaaaaaccactattttgaagatttcgagac
aaagaggcatttacaaaaattttccgcaaaaatatttatagttcggtaaa
agatacaccatctactgcgaaaaatctttcaaaatgttctttcttcgccg
aaactaagctcttcaaagttgaaatactcttcctcgcaaaagtcttcatt
ttcttcttcatcaaatttattcaatgcaaattttaaattttcagattcag
gaatagtttgtctaacagaaaatgtataacatgccatagttttgttgttt
acatcagtcagaaaacacattttatacacgacaattatgaaaaattcact
atggtcagagcccttaacaacgttttaatcaagtttttgaaaacaaatct
cttttgaaaatagttccattcatgtatggaataagctttgaaaattttag
aaaaaatgcttaactgaaactgaaaatattaagctttaaagatatttttc
tcctatgttttgcaaaaaaatgacagaatttgccgtNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNgattcagcgaaaaattttatatataa
tgttaattttttgttataaactattaactcaaggtgataggaatagaatt
ccaagattttttgcttttcctcatatttagaattttcggttttgtcaatg
ctgattctcgGGCTCCataatactggttgaccttcaagatgctatatatt
ttacccagcctctaaagtcacagatgtatttgcattttctgaacggcatt
aggtgtagaaagtttcctataccccgttttcataacttattttcaatatc
gaAGGAGCTAGAGtaagttatatgcaatttttatctaattttggtgtcaa
aatatttcctttggacgcaatatgttattttgaatctgtctcaaactagc
aaaaacatgctcatttttaagtataaccatcattctttcaaaacaaacaa
aaatcgtttaattctgataaatctacaagtcagaatcttcattttaatga
aaacctccgttttgggggccgtctccgttttgggggccatatactgtatg
taCTTGTTACATgaaatttatttctgattgtttcgaatttattgacacta
ataaagtcctcagctgtaagttgtaaagtaAGTatcatgggaataaaatc
aagTGAACTTTTTCAAATAATCACATGTTTGGACTGCATTGGTATAATTT
TACAACCCGTGTATTCCCTCCTCTCTTCGACAATTAGACACTGTTTAAAA
AGCACTTGAGACTAATCACCCTACTCTTCCTCTCATTCTTTCAGATGACG
ATATCANTTGGAGAttgatcaaaataaaattttctcttcctttttctttc
agatGACGATATCATAATCATCGTAGTTGTCGTGTGTTCACTTACCTTGT
TCTTCCTACTCATCCTGGCTATCTTCTTACGATATCAACGCGATCGCGAC
GATGAAGTAGGCCAAGACATCGGTGGTGGCGCCGCATCATCGTACAGAAT
CAAGAATCCAAACGAATCGCCGAACCCAGGGATGTATAGAAAATCGGTCA
AGTATGACGATATCGATATAGGACATGGAGGACCATCTGCTGGCGGATCG
CGACAGGAACTTGGCGACATACCTGATTATTAAggagaaaataaataatt
taaatgaatttgatacaacaatttcttaggaaaatgtaTTAGAATTCAGA
TAGCTTAGAGATTGGGTTTATTTTGGTGAGCTATTTTCCTTCTCAATAAC
GCTAGTTTTAAGGATTCTTTTCTCGAAAGGGCTAATTTTTGCTCAAAAGA
GTTTTTTGTTCATAATTGAAGTACTGGAAACTTTCAAACCATAAAACCAT
AATAGCCATTTATTGGGGGAAGATGACAAAACTCGCAAACTCATTATTAT
TTTGTAATTTGTAGCCACTGTAGTTTATTTATTGTGTAGTTTACTGTAAA
TTTTAGTCTTGATTAAACCCGTCATCAAAGTCGCTTATCTTTAAGGACAA
TACCTTTCTTACATAGAATCTAGCGTTCAAGTTTAAAAAGTTCAGATGGA
CAAAGCACAACGGCTTTTGTAATAGAAACTTTTCGATCATTTATTCAAAA
CATGTTATGTTCATGGCTTGAGCTCTAATTTAGACGGGCTCGTTTAATAA
TTCGAATGGGAGGGGGTAAGACTAAAAGTCGTCTTATTAAGAGCTGAGAG
GCATTTCTTACCAATCCCTGAATGTGTTATCTCCATCTGTCACGTGGTCT
CTGTAAGAGTTCAAATATgatttttgtttgttattttctttttgcactga
aattaaaaaaaattattgttgtAAATTGTT

Coding sequence (CDS) from alignment at sc0000134:182723..190102+

>TCONS_00011938 ID=TCONS_00011938|Name=TCONS_00011938|organism=Clytia hemisphaerica|type=CDS|length=2424bp|location=Sequence derived from alignment at sc0000134:182723..190102+ (Clytia hemisphaerica)
ATGAACATTAACGCTACTGATGTTTGCGACATTGGGACATCAGATTGTGA
TCCTAACCGATCAATGTGTGTTATGAATGATGACGAAGATAGTGATTTTT
ACAGTTGCAGTTGTAGTAATGGATACTTAAGTAACTCCACAACACAGTGT
TTGGATTACTGTGAAAAGGGCGTCGATGATTGTGATAAAACATCTACTAA
CTGTACGGCAACTCCAGGCATATTACCACATTATAAATGTGAATGTAAGC
TTGGTTATAATAGGAAAGACAATACTACGTGTGTGTTGCCACCGACTGGA
GAACCAACTACTGGCACGACTGATGatGACGATATCATAATCATCGTAGT
TGTCGTGTGTTCACTTACCTTGTTCTTCCTACTCATCCTGGCTATCTTCT
TACGATATCAACGCGATCGCGACGATGAAGTAGGCCAAGACATCGGTGGT
GGCGCCGCATCATCGTACAGAATCAAGAATCCAAACGAATCGCCGAACCC
AGGGATGTATAGAAAATCGGTCAAGTATGACGATATCGATATAGGACATG
GAGGACCATCTGCTGGCGGATCGCGACAGGAACTTGGCGACATACCTGAT
TATTAAATGAACATTAACGCTACTGATGTTTGCGACATTGGGACATCAGA
TTGTGATCCTAACCGATCAATGTGTGTTATGAATGATGACGAAGATAGTG
ATTTTTACAGTTGCAGTTGTAGTAATGGATACTTAAGTAACTCCACAACA
CAGTGTTTGGATTACTGTGAAAAGGGCGTCGATGATTGTGATAAAACATC
TACTAACTGTACGGCAACTCCAGGCATATTACCACATTATAAATGTGAAT
GTAAGCTTGGTTATAATAGGAAAGACAATACTACGTGTGTGTTGCCACCG
ACTGGAGAACCAACTACTGGCACGACTGATGatGACGATATCATAATCAT
CGTAGTTGTCGTGTGTTCACTTACCTTGTTCTTCCTACTCATCCTGGCTA
TCTTCTTACGATATCAACGCGATCGCGACGATGAAGTAGGCCAAGACATC
GGTGGTGGCGCCGCATCATCGTACAGAATCAAGAATCCAAACGAATCGCC
GAACCCAGGGATGTATAGAAAATCGGTCAAGTATGACGATATCGATATAG
GACATGGAGGACCATCTGCTGGCGGATCGCGACAGGAACTTGGCGACATA
CCTGATTATTAAATGAACATTAACGCTACTGATGTTTGCGACATTGGGAC
ATCAGATTGTGATCCTAACCGATCAATGTGTGTTATGAATGATGACGAAG
ATAGTGATTTTTACAGTTGCAGTTGTAGTAATGGATACTTAAGTAACTCC
ACAACACAGTGTTTGGATTACTGTGAAAAGGGCGTCGATGATTGTGATAA
AACATCTACTAACTGTACGGCAACTCCAGGCATATTACCACATTATAAAT
GTGAATGTAAGCTTGGTTATAATAGGAAAGACAATACTACGTGTGTGTTG
CCACCGACTGGAGAACCAACTACTGGCACGACTGATGatGACGATATCAT
AATCATCGTAGTTGTCGTGTGTTCACTTACCTTGTTCTTCCTACTCATCC
TGGCTATCTTCTTACGATATCAACGCGATCGCGACGATGAAGTAGGCCAA
GACATCGGTGGTGGCGCCGCATCATCGTACAGAATCAAGAATCCAAACGA
ATCGCCGAACCCAGGGATGTATAGAAAATCGGTCAAGTATGACGATATCG
ATATAGGACATGGAGGACCATCTGCTGGCGGATCGCGACAGGAACTTGGC
GACATACCTGATTATTAAATGAACATTAACGCTACTGATGTTTGCGACAT
TGGGACATCAGATTGTGATCCTAACCGATCAATGTGTGTTATGAATGATG
ACGAAGATAGTGATTTTTACAGTTGCAGTTGTAGTAATGGATACTTAAGT
AACTCCACAACACAGTGTTTGGATTACTGTGAAAAGGGCGTCGATGATTG
TGATAAAACATCTACTAACTGTACGGCAACTCCAGGCATATTACCACATT
ATAAATGTGAATGTAAGCTTGGTTATAATAGGAAAGACAATACTACGTGT
GTGTTGCCACCGACTGGAGAACCAACTACTGGCACGACTGATGatGACGA
TATCATAATCATCGTAGTTGTCGTGTGTTCACTTACCTTGTTCTTCCTAC
TCATCCTGGCTATCTTCTTACGATATCAACGCGATCGCGACGATGAAGTA
GGCCAAGACATCGGTGGTGGCGCCGCATCATCGTACAGAATCAAGAATCC
AAACGAATCGCCGAACCCAGGGATGTATAGAAAATCGGTCAAGTATGACG
ATATCGATATAGGACATGGAGGACCATCTGCTGGCGGATCGCGACAGGAA
CTTGGCGACATACCTGATTATTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_006703	XLOC_006703	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00011938-protein	TCONS_00011938-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000134	supercontig	sc0000134:182723..190102 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.3827	34.0988	18.364	16.1476	64.1507	39.7456	18.3704	21.3642	18.3043	25.5214	17.039	14.7915	0.486954	0.41376	0.428358	0.784184	25.667	26.3761	1.17929	0.814466	46.8514	42.4089	18.1639	24.2154	24.7269	28.0848	10.9828	4.3508	3.71858	4.31554

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000742	EGF-like_dom
IPR013032	EGF-like_CS
IPR009030	Growth_fac_rcpt_

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00011938 vs. Swiss-Prot (Human)

BLAST of TCONS_00011938 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00011938 (transcript) - C. hemisphaerica