TCONS_00012591 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012591
Unique NameTCONS_00012591
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012591 ID=TCONS_00012591|Name=TCONS_00012591|organism=Clytia hemisphaerica|type=transcript|length=288bp
ATTTAGTGTCATAGGGATTTCAGAAACCAAAAGCCTTGTTGACACCGAAA
CAGAAAGTCCTCTCGAAAAAAAAGAGGACTTTGCTATACCAGGTTACGAA
AAATTTTTACACCAACTGAATCTTCTAAAGGTGGGGAGGCCTTATATATT
TCACACTCTTTCTCTTACAAACCTAGGACAGACCTAGACCAAGTTTGCTA
TTCTTCATGTAGTCTTGAATCATGCTTTGCTGAAATTATCCTACCAAACA
GTACCAATATCATTGTTGGTACTATATATCGCCATCCA
Run BLAST on NCBI

transcript from alignment at sc0000145:414557..414844

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012591 ID=TCONS_00012591|Name=TCONS_00012591|organism=Clytia hemisphaerica|type=transcript|length=288bp|location=Sequence derived from alignment at sc0000145:414557..414844 (Clytia hemisphaerica)
TGGATGGCGATATATAGTACCAACAATGATATTGGTACTGTTTGGTAGGA
TAATTTCAGCAAAGCATGATTCAAGACTACATGAAGAATAGCAAACTTGG
TCTAGGTCTGTCCTAGGTTTGTAAGAGAAAGAGTGTGAAATATATAAGGC
CTCCCCACCTTTAGAAGATTCAGTTGGTGTAAAAATTTTTCGTAACCTGG
TATAGCAAAGTCCTCTTTTTTTTCGAGAGGACTTTCTGTTTCGGTGTCAA
CAAGGCTTTTGGTTTCTGAAATCCCTATGACACTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007067XLOC_007067Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012591-exon-sc0000145-1491911889:414557..414844TCONS_00012591-exon-sc0000145-1491911889:414557..414844Clytia hemisphaericaexon
TCONS_00012591-exon-sc0000145-1510915933:414557..414844TCONS_00012591-exon-sc0000145-1510915933:414557..414844Clytia hemisphaericaexon
TCONS_00012591-exon-sc0000145-1575043694:414557..414844TCONS_00012591-exon-sc0000145-1575043694:414557..414844Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145supercontigsc0000145:414557..414844 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.75772	3.71805	0.126728	3.02009	8.69012	6.08765	5.99708	7.87488	1.11373	4.66251	2.38211	4.87586	4.39735	0.681352	2.19759	2.01691	1.6551	1.85273	0	4.99962	1.9076	4.18707	0	2.97653	2.21817	4.72636	2.70536	2.88723	0	1.58553
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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