TCONS_00012607 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012607
Unique NameTCONS_00012607
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3202

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012607 ID=TCONS_00012607|Name=TCONS_00012607|organism=Clytia hemisphaerica|type=transcript|length=3202bp
CATGTTTAGTAACGAAGGATCTCAGCTTGGGAAAGTGGGAACTATAGAAT
CCCAGAAGCCTATtaataaacttctttttctGTTGTTTCTGTGGGGGAGG
TTATGCAAGCGATTTGTTAACTGAGAAAAAAAGCGAAAGAGATATTCTCT
TGAAaccatgtttttgtttttgtgggATTCTCTGATTGCTTGCTTGTAAA
TATGCGGCCTACACCCTTAAAAGTGATACGAGAATGATTGTCAACTTTCG
ACCAAATCAAAAGCACATTAACCTCCTTAAACCTGGAAGGCTTAGATGCC
CTTAGATGAGTAATTTCTTCTACGTGAGTAGTAAGTTTTTATCTTTAAAT
CAAAAGATGTTCAGGTCAGCTTTTCTTAGAAtcaaattctaataaaaaag
atacaaatcTTTTGTCTGATCCATCGAATCAATTATTCAGTAGTTTTTAA
CCCTATGTTTCGAAAAACCGCAATTTATCTATGTCtctcatcttcttttt
cttcttcattcttcattCTTCATTCTTCTATACAAGTGTTGTTTGAGGGG
AAAATAACGTTTATATACTTAATTGAAACAACCAAAGTTTAACAGTTATA
AACAGACTTGATTGAGTGCGGAGTTCAAGGAGAAACTATTCCTTTATCTT
CATCACACAGTCTGAAATCGAATTACCGTCAGAACTGGTCTAATTGATAA
GATTTAGAATCGTTACCTAAATACAATCGTAAAAACACAAACTTGGTAAA
CAATGGGTGTGTTATTGCAAgctaaacataaaaacaaaccTGTTACCGAT
TCAAATGATATCACCTTGAATGTCAATGGGCATAAACGTCGAAACAGCTA
CGAGGGACGAGGTGACGGCCCTGGAGAAGACTTTTTGGATATGTTATTGA
AATCCCAGGGTTCACGACTCGACGACCAGCGAGTAGACTTCCCCAAACAA
CGTGTATCAAGCACCAATGGCACAAGgccatcaaaaacaaaatcatctAC
CAAAAACTCTAAAAAGAATTCCAGTAAAAAACAATCGGCCAAACCCGAAC
ACAGTAAGGAGGGTTTTATGGATCTAGTTGCTAGGCTACAAGGCGATCGT
ATGGATGAGCAAAGATGCTCGTTACCAGAGCTACCAGGACTTGTAACAGA
AgcaaaaaagaagCTAATTGAGAACcagaaacaacaacaacagcaaaaaC
CGAACCAAGAAGTTCCTGATGATGCTTTCCTTGACATGCTCATGAGGTGT
CAGGCATCTCGTATCAACGATCAACGAGTAGAATTCCCTCCTATCCCGCG
CGGTCCGACCGTTCCCGATGAAGATTTCTTCAACTTGATCGCACGACTTC
AATCGAAGAGAATCGATACACAACGAGTGAGCTTTGATACGAGGAAATAT
AGTTGCTGAAGTTGGTGATTTTATGTTTATCAGGATGGGAAGTAACATTG
CCCACATATAACTGAATCAGTATTGAGGGTATGATGACTTGGAGTAACCT
TGTATTTTTTGGGTATCTGGCTTCATCATCGAGCCTCGCCATCTGGTCAA
GCTATCGAATCCTTTTAACNCTGGCTTCATCTTCGAGCCTCGCCATCTGG
TAAAAGCTATGGAATGCTATTAACCTTGAACCATATTTTGGATTTGGGGA
ATGGATAACGGATTATAATGATGTATTGATGAAGTAAAGCCCGTTTTTCA
AGCATAAAATGCGACTTTCTTCACGAACATATTCATTGAGCAAGAGATTA
GATGTTTTAGAACGTTTTCTCTGTGTTTAGGTGTTTTAGAAAGTACATac
aatttaattcaattttaatacttttaaaaactatttaacggtcaaaatta
ttttattttatagttaGCCTTTTTTCGGTTTTCTgattatttatcatttt
caaggAAGTGGACAAATTCATCGGTATTTTCAGCTTCTTTTCATTTATGA
GTGaaagtagagagtctatcaccattaGTGTTAGTCTTATCTAGATGGTA
AGTGaatgtataccgagtttatccTTCTACACCTAcaattggtagtgtga
aggtttcgattGCAGACTTGCACTGCActgcaatggactgtgttcgaatg
cAAAGCATTTCCAGGCAgagtgttagggaaatatggttATAGACTCTCTG
CAATCACTCTTTTCTCAATCTGGCTGCATgagcagatgtagaacgataaa
ctcggtatacatCTTTCCATTTGAAAGAGGCTAGATTGATTTATTGTTGC
GAATCTTAAAGCGTTCTTTCCCAATACATAGTTAACTCTTGTGATTAGTT
AGATTTTCTGAACAGTTTTCATTGGTAATGCCAACATGctcagtagcgta
gccaagagaggcgcaaaatttgtgtaggagggCAGTTTTTATGACACTGA
AAATATCTATTCACGGTATTAATAAATAATTACAGTGatataaaaatctg
ctctcctacaccaATTTTGCGctcctcttggctacgctactggcTGAAGG
AATCTCAAGTTTGAGCTAGAGCCTAATTTAAGTCCAACAAATTGCTTATA
TCTAATTTGTAGTTATTTCTTTGTAATTATTATTCTAttgttcatttttc
atgtcggttttttaaattattattcTGAACCTTTTAATTAtaacaatttt
agaaaaattatcattgtcaattattatttttataccATTGTATCATAGTG
TTGAAGcagagtattttttttttgttctttttccttCCCTCTCagaatgg
gctattccagaaaaagttTGTACCCCCTTTATTGGGGaggtcttttttat
ttttcaggagccccttggatttttttatcccattgttttggaccaccctg
gatttttgacctagtTATgctaaccaccctggattttcaacccgatttta
ctgaccaacctggattttttcattcaaaaaaccaatccaacctggatttt
ttattttccaaaccaCCTTGTACGTCACACATCCTTCACATAGGGgttac
agactatttctggaatagcccaatcctCTCGCATACATAGGTatatgttt
ttattattttgtagcTAGTTTTTAATAACTTCGCCATATCTTTCCTATGT
TTTTGCTTGTATATATTCCAAATTTCTCGTGTCAGTATATAAAATACTtg
tgaaaatggaaaaattcagAAGTGCCTTTGAATTTTACGAGTTTTCTCGG
TG
Run BLAST on NCBI

protein sequence of TCONS_00012607-protein

>TCONS_00012607-protein ID=TCONS_00012607-protein|Name=TCONS_00012607-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
MGVLLQAKHKNKPVTDSNDITLNVNGHKRRNSYEGRGDGPGEDFLDMLLK
SQGSRLDDQRVDFPKQRVSSTNGTRPSKTKSSTKNSKKNSSKKQSAKPEH
SKEGFMDLVARLQGDRMDEQRCSLPELPGLVTEAKKKLIENQKQQQQQKP
NQEVPDDAFLDMLMRCQASRINDQRVEFPPIPRGPTVPDEDFFNLIARLQ
SKRIDTQRVSFDTRKYSC
Run BLAST on NCBI

transcript from alignment at sc0000146:78107..83726+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012607 ID=TCONS_00012607|Name=TCONS_00012607|organism=Clytia hemisphaerica|type=transcript|length=5620bp|location=Sequence derived from alignment at sc0000146:78107..83726+ (Clytia hemisphaerica)
CATGTTTAGTAACGAAGGATCTCAGCTTGGGAAAGTGGGAACTATAGAAT
CCCAGAAGCCTATtaataaacttctttttctGTTGTTTCTGTGGGGGAGG
TTATGCAAGCGATTTGTTAACTGAGAAAAAAAGCGAAAGAGATATTCTCT
TGAAaccatgtttttgtttttgtgggATTCTCTGATTGCTTGCTTGTAAA
TATGCGGCCTACACCCTTAAAAGTGATACGAGAATGATTGTCAACTTTCG
ACCAAATCAAAAGCACATTAACCTCCTTAAACCTGGAAGGCTTAGATGCC
CTTAGATGAGTAATTTCTTCTACGTGAGTAGTAAGTTTTTATCTTTAAAT
CAAAAGATGTTCAGGTCAGCTTTTCTTAGAAtcaaattctaataaaaaag
atacaaatcTTTTGTCTGATCCATCGAATCAATTATTCAGTAGTTTTTAA
CCCTATGTTTCGAAAAACCGCAATTTATCTATGTCtctcatcttcttttt
cttcttcattcttcattCTTCATTCTTCTATACAAGTGTTGTTTGAGGGG
AAAATAACGTTTATATACTTAATTGAAACAACCAAAGTTTAACAGTTATA
AACAGACTTGATTGAGTGCGGAGTTCAAGGAGAAACTATTCCTTTATCTT
CATCACACAGTCTGAAATCGAATTACCGTCAGAACTGGTCTAATTGATAA
GATTTAGAATCGTTACCTAAATACAATCGTAAAAACACAAACTTGGTAAA
CAATGGGTGTGTTATTGCAAgctaaacataaaaacaaagtgagtttttat
ttcaaattttcttcttttttttttcttttaggacCTGGAAATGTGGTAAG
TTGGATGcttcagttttttttctcttgATATCTGTAATATCCCCTTGTCT
CGCTCAACAAAGCTTAAAAAGGCTTGACGAAAGCTTTTCATCGGTGTGTC
TATAtctctaaaaagttttttttggcgTAAATGGGCCATCCATACAGGAG
GAGTCtaaaaagaatgtttttttcatttttccagtgggtaaaagactgat
tttagtccGTCCAGCGTCGTATTAAGATATGAAAAGAACCTTTTCATTGT
TgcaaaattttgtcattttccaggggggtaTCCATACATTTTtatgaatc
tttttttttttacttgaaagggttcgtccacccctctgtatggaaattta
atgtaaTGGCCCAATGATCATAACACATAACAGCCTGACCTTtattatat
tttgtatttttttttttgctgaaattaatactgttttcttcttctttttt
cagccTGTTACCGATTCAAATGATATCACCTTGAATGTCAATGGGCATAA
AGTAAGTTTAACCAGCCAATATGTATATGTCACTTTATACTTTGTGCTAG
CCAAAACCAATAACAGTGCTCATGTTAATGATAACAGAGCTTTATACTAA
TTTGAGTAAGGAAAACGATTTAGTTTAATTTCACACTCAAAGTTTCATTT
CCATCCAAgatggcaatcttcagtgaTTCAGTGATTCGAACTAATATGTC
ATTTTATACCAAACTGTTGCCGCTATCCATCATTAAgtcattgtaaagga
aatacAATTTGTTAtaacttttcaaagattttaatcTTATCAAATCTTTA
CTTCTAGCGTCGAAACAGCTACGAGGGACGAGGTGACGGCCCTGGAGAAG
ACTTTTTGGATATGTTATTGAAATCCCAGGGTTCACGACTCGACGACCAG
CGAGTAGACTTCCCCAAACAACGTGTATCAAGCACCAATGGCACAAGgcc
atcaaaaacaaaatcatctACCAAAAACTCTAAAAAGAATTCCAGTAAAA
AACAATCGGCCAAACCCGAACACAGTAAGGAGGGTTTTATGGATCTAGTT
GCTAGGCTACAAGGCGATCGTATGGATGAGCAAAGATGCTCGTTACCAGA
GCTACCAGGACTTGTAACAGAAggtattttattaaattattctaTTTTGG
AATCCTAAAAAAGTTCCgcaaaatattaaattatttaaaatgaatttcaa
tGACCAAGACCGTTAGTCGAAATTATTTATGAgattaaaagtaaataaat
ttaTTAACCTAGTAACTTAGGCAACATCACCTTTTACTTAGGACAAAAAT
AAGATGTTTCCTGTGCCACACTTAAGTAGTTCTAGGGTCATTCGAAAACC
TGACCTACTTCTGTGGCCCGATCTTATGGCCTTCCCTATGGCCTACCTTA
TGGCCCACTTCCGAAAATGTGGAAACAATTCTAAGGTTGGCCTTTGTTTT
GAGACTAAAATAAGTTTGAGTCTGCATTTTATACACCTGATTTTGCGTGC
TTTTGAATCCttgtaatttgattgacataaTGAAGAGATGTcagtaattt
gattgacataaTGAAGAAATGTcagtaatttgattgacataaTAAAGAGA
TGTcagtaatttgattgacataataaagagattttagtaatttgattgac
ataaTGAAGAGAGAATCATAACACAATGAGAACACCCGTTGCCGTCAGAT
GCTAAAGGTCGCTGTTAAGCATCTTCGGGTCGTGATAGTACTTGGATTGG
GGACCGCCTGGGATCTCCCGGTGTTATGGGAGCATTAAGATTGATTGAAT
TGATTGAGCAGAAAGttttaatcttatttcaatGATTCTACGCCCAGTTT
AGGTAATGAGTTTTAAGGATTTCAcctcaaataaaaatttgtagcttttt
tttttgggacacactgtattttctatacatgttttttttataagcaaatg
tCTGTCCCTATATAATGTAATAATATGATTAGCCTTCTCTTGTTCTCAAA
AAATAGAGCTATTGTTTCGGTACCAAAAagtgagcctgcatatgctttta
aacgttatgcttgtgaaagaaaaaacatgtataattcttacattttgtta
ttaattttagcaaaaaagaagCTAATTGAGAACcagaaacaacaacaaca
gcaaaaaCCGAACCAAGAAGTTCCTGATGATGCTTTCCTTGACATGCTCA
TGAGGTGTCAGGTAAGTTCattgttacacgttttttatataagaacaaac
tatataagaacataaggcttcgattgccaaaatgttaagaacaagttaag
aacattttaaggctttggagactcaAAAAGACCTATCTACTTAGGAAATC
Gcataaaaatactcacaaaatggtgaaaatgacaacatgttaagaacatt
tttaggcttaaaactcaaaaagttaagaacatccgagggcttcaaaagtt
ttgaatgttcttaaaaaaaacatgtaatgttataaaaattttccagttaa
TTTCTTTACGTAGCCTAACATGTCTCATTCAACAGTTATGCAAACCAAAT
TTGctacaaattttttctaaatatgTGAGTCAGTTCAAGTCCAGTTGAAG
ACAGTTCCCCTTCCCCAAAAACAATGTTGTTCAAGAGAACGAGCTGTTGT
TGCATCTGGCATTGTGTATTGGGGGAGGGTGATCGGATTTTTTTGGTAGA
TATTTTGACTGTCGATATTTTGCAAAAGATGTCAGCCTTCTTTCTTCTTC
GCAGTTTGCAAAGATTATCAGACAACCTTTTAACACAGATATGTTAACCG
ATATAACCTCTCCTTGTTTAGGCATCTCGTATCAACGATCAACGAGTAGA
ATTCCCTCCTATCCCGCGCGGTCCGACCGTTCCCGATGAAGATTTCTTCA
ACTTGATCGCACGACTTCAATCGAAGAGAATCGATACACAACGAGTGAGC
TTTGATACGAGGAAATATAGTTGCTGAAGTTGGTGATTTTATGTTTATCA
GGATGGGAAGTAACATTGCCCACATATAACTGAATCAGTATTGAGGGTAT
GATGACTTGGAGTAACCTTGTATTTTTTGGGTATCTGGCTTCATCATCGA
GCCTCGCCATCTGGTCAAGCTATCGAATCCTTTTAACNCTGGCTTCATCT
TCGAGCCTCGCCATCTGGTAAAAGCTATGGAATGCTATTAACCTTGAACC
ATATTTTGGATTTGGGGAATGGATAACGGATTATAATGATGTATTGATGA
AGTAAAGCCCGTTTTTCAAGCATAAAATGCGACTTTCTTCACGAACATAT
TCATTGAGCAAGAGATTAGATGTTTTAGAACGTTTTCTCTGTGTTTAGGT
GTTTTAGAAAGTACATacaatttaattcaattttaatacttttaaaaact
atttaacggtcaaaattattttattttatagttaGCCTTTTTTCGGTTTT
CTgattatttatcattttcaaggAAGTGGACAAATTCATCGGTATTTTCA
GCTTCTTTTCATTTATGAGTGaaagtagagagtctatcaccattaGTGTT
AGTCTTATCTAGATGGTAAGTGaatgtataccgagtttatccTTCTACAC
CTAcaattggtagtgtgaaggtttcgattGCAGACTTGCACTGCActgca
atggactgtgttcgaatgcAAAGCATTTCCAGGCAgagtgttagggaaat
atggttATAGACTCTCTGCAATCACTCTTTTCTCAATCTGGCTGCATgag
cagatgtagaacgataaactcggtatacatCTTTCCATTTGAAAGAGGCT
AGATTGATTTATTGTTGCGAATCTTAAAGCGTTCTTTCCCAATACATAGT
TAACTCTTGTGATTAGTTAGATTTTCTGAACAGTTTTCATTGGTAATGCC
AACATGctcagtagcgtagccaagagaggcgcaaaatttgtgtaggaggg
CAGTTTTTATGACACTGAAAATATCTATTCACGGTATTAATAAATAATTA
CAGTGatataaaaatctgctctcctacaccaATTTTGCGctcctcttggc
tacgctactggcTGAAGGAATCTCAAGTTTGAGCTAGAGCCTAATTTAAG
TCCAACAAATTGCTTATATCTAATTTGTAGTTATTTCTTTGTAATTATTA
TTCTAttgttcatttttcatgtcggttttttaaattattattcTGAACCT
TTTAATTAtaacaattttagaaaaattatcattgtcaattattattttta
taccATTGTATCATAGTGTTGAAGcagagtattttttttttgttcttttt
ccttCCCTCTCagaatgggctattccagaaaaagttTGTACCCCCTTTAT
TGGGGaggtcttttttatttttcaggagccccttggatttttttatccca
ttgttttggaccaccctggatttttgacctagtTATgctaaccaccctgg
attttcaacccgattttactgaccaacctggattttttcattcaaaaaac
caatccaacctggattttttattttccaaaccaCCTTGTACGTCACACAT
CCTTCACATAGGGgttacagactatttctggaatagcccaatcctCTCGC
ATACATAGGTatatgtttttattattttgtagcTAGTTTTTAATAACTTC
GCCATATCTTTCCTATGTTTTTGCTTGTATATATTCCAAATTTCTCGTGT
CAGTATATAAAATACTtgtgaaaatggaaaaattcagAAGTGCCTTTGAA
TTTTACGAGTTTTCTCGGTG

Coding sequence (CDS) from alignment at sc0000146:78107..83726+

>TCONS_00012607 ID=TCONS_00012607|Name=TCONS_00012607|organism=Clytia hemisphaerica|type=CDS|length=3285bp|location=Sequence derived from alignment at sc0000146:78107..83726+ (Clytia hemisphaerica)
ATGGGTGTGTTATTGCAAgctaaacataaaaacaaaccTGTTACCGATTC
AAATGATATCACCTTGAATGTCAATGGGCATAAACGTCGAAACAGCTACG
AGGGACGAGGTGACGGCCCTGGAGAAGACTTTTTGGATATGTTATTGAAA
TCCCAGGGTTCACGACTCGACGACCAGCGAGTAGACTTCCCCAAACAACG
TGTATCAAGCACCAATGGCACAAGgccatcaaaaacaaaatcatctACCA
AAAACTCTAAAAAGAATTCCAGTAAAAAACAATCGGCCAAACCCGAACAC
AGTAAGGAGGGTTTTATGGATCTAGTTGCTAGGCTACAAGGCGATCGTAT
GGATGAGCAAAGATGCTCGTTACCAGAGCTACCAGGACTTGTAACAGAAg
caaaaaagaagCTAATTGAGAACcagaaacaacaacaacagcaaaaaCCG
AACCAAGAAGTTCCTGATGATGCTTTCCTTGACATGCTCATGAGGTGTCA
GGCATCTCGTATCAACGATCAACGAGTAGAATTCCCTCCTATCCCGCGCG
GTCCGACCGTTCCCGATGAAGATTTCTTCAACTTGATCGCACGACTTCAA
TCGAAGAGAATCGATACACAACGAGTGAGCTTTGATACGAGGAAATATAG
TTGCTGAATGGGTGTGTTATTGCAAgctaaacataaaaacaaaccTGTTA
CCGATTCAAATGATATCACCTTGAATGTCAATGGGCATAAACGTCGAAAC
AGCTACGAGGGACGAGGTGACGGCCCTGGAGAAGACTTTTTGGATATGTT
ATTGAAATCCCAGGGTTCACGACTCGACGACCAGCGAGTAGACTTCCCCA
AACAACGTGTATCAAGCACCAATGGCACAAGgccatcaaaaacaaaatca
tctACCAAAAACTCTAAAAAGAATTCCAGTAAAAAACAATCGGCCAAACC
CGAACACAGTAAGGAGGGTTTTATGGATCTAGTTGCTAGGCTACAAGGCG
ATCGTATGGATGAGCAAAGATGCTCGTTACCAGAGCTACCAGGACTTGTA
ACAGAAgcaaaaaagaagCTAATTGAGAACcagaaacaacaacaacagca
aaaaCCGAACCAAGAAGTTCCTGATGATGCTTTCCTTGACATGCTCATGA
GGTGTCAGGCATCTCGTATCAACGATCAACGAGTAGAATTCCCTCCTATC
CCGCGCGGTCCGACCGTTCCCGATGAAGATTTCTTCAACTTGATCGCACG
ACTTCAATCGAAGAGAATCGATACACAACGAGTGAGCTTTGATACGAGGA
AATATAGTTGCTGAATGGGTGTGTTATTGCAAgctaaacataaaaacaaa
ccTGTTACCGATTCAAATGATATCACCTTGAATGTCAATGGGCATAAACG
TCGAAACAGCTACGAGGGACGAGGTGACGGCCCTGGAGAAGACTTTTTGG
ATATGTTATTGAAATCCCAGGGTTCACGACTCGACGACCAGCGAGTAGAC
TTCCCCAAACAACGTGTATCAAGCACCAATGGCACAAGgccatcaaaaac
aaaatcatctACCAAAAACTCTAAAAAGAATTCCAGTAAAAAACAATCGG
CCAAACCCGAACACAGTAAGGAGGGTTTTATGGATCTAGTTGCTAGGCTA
CAAGGCGATCGTATGGATGAGCAAAGATGCTCGTTACCAGAGCTACCAGG
ACTTGTAACAGAAgcaaaaaagaagCTAATTGAGAACcagaaacaacaac
aacagcaaaaaCCGAACCAAGAAGTTCCTGATGATGCTTTCCTTGACATG
CTCATGAGGTGTCAGGCATCTCGTATCAACGATCAACGAGTAGAATTCCC
TCCTATCCCGCGCGGTCCGACCGTTCCCGATGAAGATTTCTTCAACTTGA
TCGCACGACTTCAATCGAAGAGAATCGATACACAACGAGTGAGCTTTGAT
ACGAGGAAATATAGTTGCTGAATGGGTGTGTTATTGCAAgctaaacataa
aaacaaaccTGTTACCGATTCAAATGATATCACCTTGAATGTCAATGGGC
ATAAACGTCGAAACAGCTACGAGGGACGAGGTGACGGCCCTGGAGAAGAC
TTTTTGGATATGTTATTGAAATCCCAGGGTTCACGACTCGACGACCAGCG
AGTAGACTTCCCCAAACAACGTGTATCAAGCACCAATGGCACAAGgccat
caaaaacaaaatcatctACCAAAAACTCTAAAAAGAATTCCAGTAAAAAA
CAATCGGCCAAACCCGAACACAGTAAGGAGGGTTTTATGGATCTAGTTGC
TAGGCTACAAGGCGATCGTATGGATGAGCAAAGATGCTCGTTACCAGAGC
TACCAGGACTTGTAACAGAAgcaaaaaagaagCTAATTGAGAACcagaaa
caacaacaacagcaaaaaCCGAACCAAGAAGTTCCTGATGATGCTTTCCT
TGACATGCTCATGAGGTGTCAGGCATCTCGTATCAACGATCAACGAGTAG
AATTCCCTCCTATCCCGCGCGGTCCGACCGTTCCCGATGAAGATTTCTTC
AACTTGATCGCACGACTTCAATCGAAGAGAATCGATACACAACGAGTGAG
CTTTGATACGAGGAAATATAGTTGCTGAATGGGTGTGTTATTGCAAgcta
aacataaaaacaaaccTGTTACCGATTCAAATGATATCACCTTGAATGTC
AATGGGCATAAACGTCGAAACAGCTACGAGGGACGAGGTGACGGCCCTGG
AGAAGACTTTTTGGATATGTTATTGAAATCCCAGGGTTCACGACTCGACG
ACCAGCGAGTAGACTTCCCCAAACAACGTGTATCAAGCACCAATGGCACA
AGgccatcaaaaacaaaatcatctACCAAAAACTCTAAAAAGAATTCCAG
TAAAAAACAATCGGCCAAACCCGAACACAGTAAGGAGGGTTTTATGGATC
TAGTTGCTAGGCTACAAGGCGATCGTATGGATGAGCAAAGATGCTCGTTA
CCAGAGCTACCAGGACTTGTAACAGAAgcaaaaaagaagCTAATTGAGAA
CcagaaacaacaacaacagcaaaaaCCGAACCAAGAAGTTCCTGATGATG
CTTTCCTTGACATGCTCATGAGGTGTCAGGCATCTCGTATCAACGATCAA
CGAGTAGAATTCCCTCCTATCCCGCGCGGTCCGACCGTTCCCGATGAAGA
TTTCTTCAACTTGATCGCACGACTTCAATCGAAGAGAATCGATACACAAC
GAGTGAGCTTTGATACGAGGAAATATAGTTGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007076XLOC_007076Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012607-exon-sc0000146-1491911889:78107..78894TCONS_00012607-exon-sc0000146-1491911889:78107..78894Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1510915933:78107..78894TCONS_00012607-exon-sc0000146-1510915933:78107..78894Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1575043694:78107..78894TCONS_00012607-exon-sc0000146-1575043694:78107..78894Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1491911889:79410..79457TCONS_00012607-exon-sc0000146-1491911889:79410..79457Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1510915933:79410..79457TCONS_00012607-exon-sc0000146-1510915933:79410..79457Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1575043694:79410..79457TCONS_00012607-exon-sc0000146-1575043694:79410..79457Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1491911889:79764..80079TCONS_00012607-exon-sc0000146-1491911889:79764..80079Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1510915933:79764..80079TCONS_00012607-exon-sc0000146-1510915933:79764..80079Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1575043694:79764..80079TCONS_00012607-exon-sc0000146-1575043694:79764..80079Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1491911889:81067..81167TCONS_00012607-exon-sc0000146-1491911889:81067..81167Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1510915933:81067..81167TCONS_00012607-exon-sc0000146-1510915933:81067..81167Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1575043694:81067..81167TCONS_00012607-exon-sc0000146-1575043694:81067..81167Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1491911889:81778..83726TCONS_00012607-exon-sc0000146-1491911889:81778..83726Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1510915933:81778..83726TCONS_00012607-exon-sc0000146-1510915933:81778..83726Clytia hemisphaericaexon
TCONS_00012607-exon-sc0000146-1575043694:81778..83726TCONS_00012607-exon-sc0000146-1575043694:81778..83726Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012607-proteinTCONS_00012607-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146supercontigsc0000146:78107..83726 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.231881	0.361792	0.483164	0.354525	6.00392	5.63395	5.36615	5.19118	2.34588	2.4432	2.83853	2.42041	3.07144	2.86703	1.13236	1.66736	2.47182	3.67541	4.1904	5.10718	1.97292	2.69012	1.86109	1.3536	4.58086	4.84376	2.67082	1.96811	1.54422	2.35997
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003109GoLoco_motif
Vocabulary: Molecular Function
TermDefinition
GO:0030695GTPase regulator activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030695 GTPase regulator activity
Blast
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BLAST of TCONS_00012607 vs. Swiss-Prot (Human)
Match: GPSM1 (G-protein-signaling modulator 1 OS=Homo sapiens GN=GPSM1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 5.383e-19
Identity = 68/171 (39.77%), Postives = 95/171 (55.56%), Query Frame = 3 
Query:  876 EDFLDMLLKSQGSRLDDQRVDFP-KQRVSSTNGTRPXXXXXXXXXXXXXXXXXXXAKPEHSKEGFMDLVARLQGDRMDEQRCSLPELPGL-VTEAXXXXXXXXXXXXXXXXXXXVPDDAFLDMLMRCQASRINDQRVEFPPI-PRGPTVPDEDFFNLIARLQSKRIDTQRV 1379
            E F D+L K Q SR+DDQR      Q  ++     P+      + S         A P+   E F DL+A  Q  R+D+QR S+  LPGL +T +    +    + Q+       P D F +ML++ Q+SRI+DQR   P + PRGPT+PDEDFF+LI R+Q+KR+D QRV
Sbjct:  496 ECFFDLLTKFQSSRMDDQRCPLDDGQAGAAEATAAPTLEDRIAQPSMT-------ASPQ--TEEFFDLIASSQSRRLDDQRASVGSLPGLRITHSNAGHLRGHGEPQE-------PGDDFFNMLIKYQSSRIDDQRCPPPDVLPRGPTMPDEDFFSLIQRVQAKRMDEQRV 650
The following BLAST results are available for this feature:
BLAST of TCONS_00012607 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPSM15.383e-1939.77G-protein-signaling modulator 1 OS=Homo sapiens GN... [more]
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