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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012934 ID=TCONS_00012934|Name=TCONS_00012934|organism=Clytia hemisphaerica|type=transcript|length=974bp
GAAAAATCATATCAACAAGACAAGGCTGATGAATTCCTGGCCTCTCTTGT
ATCAGACATAACACAAAACATCGATGAACCATCAACACCATTCTTCGTGA
ATCTTGGCAAAGTATACGACCTTCCCAGAGACTCTGTTATCAAAAGTTTA
CAACAACTGAAGAATCCAACATCAGTGACTCTATTCAGAGAGCAAATGTT
TTATCTCTTTCTTGCACACTACACTGAAAATGAGAAAGTACTCTCGGATA
ACGGTTTCAACTGCACAAAAGACAATGCAAAAACTCACCTTAAAACAAGA
AGGAGTACTGTTAACGCGTTAGAAGACATTTATGAACTTGGTAAGTCTAT
CCACGAGAACCGGATTGCGTCAGGACTTGCCTCGAAGATTCTTAAAGATA
AAGTTGCCAATAACCCCAAGACTGTGGAACCAGACATTCAGCCCATTCCA
GAGGATGCCACGATCCTCCAAAAGCTGCAGGCTATCATCGCCTTCAATGC
TAAACTCGTCACTCAAAACAAAGAACTGAAACTTCAAATGTCAGAACTTG
AGAAAGACAATACCTTCCTCAGAGAGCATCTCATCTCTGTTGAAGCCAAA
CTCGATACATTGATCTCAAGCAACACACTCAAGCAGCAACATACCATTGC
AGAAGATCCTATTGTTCCTATTGCTCAACAACAACCACCTGGTGAACAAC
AAGACAACGACAAACGACATGACGACCAACCAGCCCAGAACGCTCGTAGT
GACAACAAATCTCACCACAAACAAACGAACGAGAATCACAAGAAGcaatt
acaaaataaaaatgtagtgTACGGTGGTAAATCACACATCGGGAAAAATG
TGTCAGGAGTGACCAGGCCataccgtaggatcgtctaatctcgacatacg
tcttgcaatctcgacaccggatctgtaaaataatcaaaacaaaccttgaa
tgaaattcttggtatcattcttat Run BLAST on NCBI protein sequence of TCONS_00012934-protein >TCONS_00012934-protein ID=TCONS_00012934-protein|Name=TCONS_00012934-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
EKSYQQDKADEFLASLVSDITQNIDEPSTPFFVNLGKVYDLPRDSVIKSL
QQLKNPTSVTLFREQMFYLFLAHYTENEKVLSDNGFNCTKDNAKTHLKTR
RSTVNALEDIYELGKSIHENRIASGLASKILKDKVANNPKTVEPDIQPIP
EDATILQKLQAIIAFNAKLVTQNKELKLQMSELEKDNTFLREHLISVEAK
LDTLISSNTLKQQHTIAEDPIVPIAQQQPPGEQQDNDKRHDDQPAQNARS
DNKSHHKQTNENHKKQLQNKNVVYGGKSHIGKNVSGVTRPYRRIV Run BLAST on NCBI transcript from alignment at sc0000157:422077..423050 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012934 ID=TCONS_00012934|Name=TCONS_00012934|organism=Clytia hemisphaerica|type=transcript|length=974bp|location=Sequence derived from alignment at sc0000157:422077..423050 (Clytia hemisphaerica)
ataagaatgataccaagaatttcattcaaggtttgttttgattattttac
agatccggtgtcgagattgcaagacgtatgtcgagattagacgatcctac
ggtatGGCCTGGTCACTCCTGACACATTTTTCCCGATGTGTGATTTACCA
CCGTAcactacatttttattttgtaattgCTTCTTGTGATTCTCGTTCGT
TTGTTTGTGGTGAGATTTGTTGTCACTACGAGCGTTCTGGGCTGGTTGGT
CGTCATGTCGTTTGTCGTTGTCTTGTTGTTCACCAGGTGGTTGTTGTTGA
GCAATAGGAACAATAGGATCTTCTGCAATGGTATGTTGCTGCTTGAGTGT
GTTGCTTGAGATCAATGTATCGAGTTTGGCTTCAACAGAGATGAGATGCT
CTCTGAGGAAGGTATTGTCTTTCTCAAGTTCTGACATTTGAAGTTTCAGT
TCTTTGTTTTGAGTGACGAGTTTAGCATTGAAGGCGATGATAGCCTGCAG
CTTTTGGAGGATCGTGGCATCCTCTGGAATGGGCTGAATGTCTGGTTCCA
CAGTCTTGGGGTTATTGGCAACTTTATCTTTAAGAATCTTCGAGGCAAGT
CCTGACGCAATCCGGTTCTCGTGGATAGACTTACCAAGTTCATAAATGTC
TTCTAACGCGTTAACAGTACTCCTTCTTGTTTTAAGGTGAGTTTTTGCAT
TGTCTTTTGTGCAGTTGAAACCGTTATCCGAGAGTACTTTCTCATTTTCA
GTGTAGTGTGCAAGAAAGAGATAAAACATTTGCTCTCTGAATAGAGTCAC
TGATGTTGGATTCTTCAGTTGTTGTAAACTTTTGATAACAGAGTCTCTGG
GAAGGTCGTATACTTTGCCAAGATTCACGAAGAATGGTGTTGATGGTTCA
TCGATGTTTTGTGTTATGTCTGATACAAGAGAGGCCAGGAATTCATCAGC
CTTGTCTTGTTGATATGATTTTTC Coding sequence (CDS) from alignment at sc0000157:422077..423050 >TCONS_00012934 ID=TCONS_00012934|Name=TCONS_00012934|organism=Clytia hemisphaerica|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000157:422077..423050 (Clytia hemisphaerica)
ttagacgatcctacggtatGGCCTGGTCACTCCTGACACATTTTTCCCGA
TGTGTGATTTACCACCGTAcactacatttttattttgtaattgCTTCTTG
TGATTCTCGTTCGTTTGTTTGTGGTGAGATTTGTTGTCACTACGAGCGTT
CTGGGCTGGTTGGTCGTCATGTCGTTTGTCGTTGTCTTGTTGTTCACCAG
GTGGTTGTTGTTGAGCAATAGGAACAATAGGATCTTCTGCAATGGTATGT
TGCTGCTTGAGTGTGTTGCTTGAGATCAATGTATCGAGTTTGGCTTCAAC
AGAGATGAGATGCTCTCTGAGGAAGGTATTGTCTTTCTCAAGTTCTGACA
TTTGAAGTTTCAGTTCTTTGTTTTGAGTGACGAGTTTAGCATTGAAGGCG
ATGATAGCCTGCAGCTTTTGGAGGATCGTGGCATCCTCTGGAATGGGCTG
AATGTCTGGTTCCACAGTCTTGGGGTTATTGGCAACTTTATCTTTAAGAA
TCTTCGAGGCAAGTCCTGACGCAATCCGGTTCTCGTGGATAGACTTACCA
AGTTCATAAATGTCTTCTAACGCGTTAACAGTACTCCTTCTTGTTTTAAG
GTGAGTTTTTGCATTGTCTTTTGTGCAGTTGAAACCGTTATCCGAGAGTA
CTTTCTCATTTTCAGTGTAGTGTGCAAGAAAGAGATAAAACATTTGCTCT
CTGAATAGAGTCACTGATGTTGGATTCTTCAGTTGTTGTAAACTTTTGAT
AACAGAGTCTCTGGGAAGGTCGTATACTTTGCCAAGATTCACGAAGAATG
GTGTTGATGGTTCATCGATGTTTTGTGTTATGTCTGATACAAGAGAGGCC
AGGAATTCATCAGCCTTGTCTTGTTGATATGATTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012934-exon-sc0000157-1491911889:422077..423050 | TCONS_00012934-exon-sc0000157-1491911889:422077..423050 | Clytia hemisphaerica | exon |
| TCONS_00012934-exon-sc0000157-1510915933:422077..423050 | TCONS_00012934-exon-sc0000157-1510915933:422077..423050 | Clytia hemisphaerica | exon |
| TCONS_00012934-exon-sc0000157-1575043694:422077..423050 | TCONS_00012934-exon-sc0000157-1575043694:422077..423050 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000157 | supercontig | sc0000157:422077..423050 . |
Blast
The following BLAST results are available for this feature:
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