TCONS_00013011 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013011
Unique NameTCONS_00013011
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2480

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013011 ID=TCONS_00013011|Name=TCONS_00013011|organism=Clytia hemisphaerica|type=transcript|length=2480bp
TTAACCCTTTCTATTTTGCCTTTAAGgaataaaaatactaaaaaatacta
aaaaacaaTATACAATGCAGTGGTTTCAAGGCGATGTCTCTGAAGCCATT
CAAAAGGCTATTAGTGAACAGAAGATGTTCATTGTCTTTGTTCGAGATGA
CAAAGAAGAATCACAGAAAATGGAAGAATTATGCAATTCAGATGAGgtta
agaacatttgtaCAGATGATCTTTGTGTAGCAATTAACATCACGGTGGAT
AGTGAAGCAGGTCAACAATTTGGTGCTATCTATCCCATTGCATTTTTACC
ATGCACCTTCTTCATTGAGAATGATGGCATCCCTGCTGCAATCTTCCCTA
CCATGGAAAAAGACAAATTTGTTGAGAAAACTGAAGAGCTAATGGCGGTg
gtaagaaaattgaaaattggtgaATCCCAGAAACCAGCTTCAGAAGCACA
ACAGCAAGACTCACCTTCAGAAACCACAAGCAGCGATGCAGTTGGAAATA
AAGAGCCAACAAACTCAACTTCTGCAAGCGAAGAAGAACtcacaaagaaa
gaaaaagcagACCTCTTGATCTTAAAAGCAAAAGCTAAAAAAGCtcagaa
agaaaaacaaGAGGCAAGAGAGCGTGAACAAAAACGAAGAGACGAAGGGC
GCGAGCTTAGTCACGCAAGACGTGATCTAGCAGAACGACAAGCCAAACAA
CTAGCGGACGATCTCGCTAAGAGGCGGGAGGAAGAACGAGCCGCGCGGGA
ACGAGTAAAACAACAGATCAAACAAGACCGTGAAGACAAAGTAGCGAGAT
TTGAAGCCGAGAAAAAAGCACGAGAGGagacaaaacaacaaaaagttgca
aaaaaagATGCAGAGAAAGAAGCGAAAGCACAAGCTGTAAAGGCGGCAAG
AGACGCGGCAGCTCGTATACAGTTTCGACTACCTGACGGTTCAACATCAT
ACAAACAATTTCCTTCTGATGCCAAATTCATTGTTGTTGTCAATCACGTA
ACAAAGGAACTGGCGCCCCACATTCCAATTGTTCGTTTAACAACAGTCTA
CCCAAAACACGAATACACACAAGAAGATCATTCAAAGTCCTTACGTGACC
TTGGCCTCTCTCCAAACGCGTCCGTTATCGTTTCACACGGTCGCGCGTCT
TCATCTTCATCCTCCTCACTCAATCCAATCTCCATTCTTATGACAGTTTT
GGCGCCCCTTCTAGCTCTCATCTATTGGTTCTTTTCACTCTTCAAATCTA
CACCGACCACCACAACACCTAATGACGCGCCATCTGCTCAACAACAAGAA
CCTTCTTCTATCTCGACAAACGACCATAGGGATGCGTCAGTACGGAGGCG
TAATTTGGGCGGTGGATCTAACATCAGGCGTTTATATGACGACAAGCCAG
ATGATGAAGACAACGCCACATGGAATGGAAATTCAACACAACAAATGTAG
tagaaaagatattcaaattgtCAGTAATACATAGAACACTCTtccattat
tttgaaatttgaaggaATTGGGCCgttaaaaatcatgaaataatCTCTTT
GGAGACTTTTTGAAACTTACTACCTACTGTTAATGAATAAAATGATATAA
TGCTACCCAACAAGACATTTTTAACTGAAGATTAAAATGGCGACAGAAAT
TGAGGAACCAATTGAAGCAACCAAGGTCAAAATAAGAATATATTAAACTC
CTGAAAATTGGACAAAATCGCACGGTTGTCTATACGGTATTAAGAATTAT
TCGTTGTGTAATGGTTTATGAAACTTCGAGGTTCGATTTTCTGCGAATGC
AAAACACTCTTTAAACCTATTAAAAACCATTATGAACATTTTGTATCTTT
ATCAATAAAATATGCAGTAGATGTTGGTTTCCAAATTTATcattatttat
attttgaattttacggTATAATTATATTAGCatataatataaatttttac
GTTATATTTTGGAAGTTTTTCTCGCCTTTCGTAAAACAAAATGATTATCC
AATTATCGCAACAAATATGCGGGGAGCTTCTAAATGATCATAATATGTAT
AGTGTAGAGAAGACTATTATTATGGATCTaacttttttttccaaatttca
taaTGTGGCTACGTTGCGAGagatttattttgtattttcaggTAGTTTTC
ATTTGCAGAACTTAGgttatgtttttaaataaacaaCGTCAATTTTCAAG
TCTAAGCCTAAACTTGAAAATTAACGCtaaaggttttagttttacataAC
TTTCCCATTAATCTTCCACAAATTTTCTCCCCTTCGCTATTATGAATTTG
TTGTCGAATTTgctggaaatattttttatatattatgataacttgatatc
tatattgtataaaatttgataaatcaATCACGCAAACTACAATGAAAATA
TAGATTATAAAAGCTATAAATTATGAATCAACGAAACttatatctttttc
atttttatgggCTTCTTGATCCAAAAACgc
Run BLAST on NCBI

transcript from alignment at sc0000161:300762..316145-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013011 ID=TCONS_00013011|Name=TCONS_00013011|organism=Clytia hemisphaerica|type=transcript|length=15384bp|location=Sequence derived from alignment at sc0000161:300762..316145- (Clytia hemisphaerica)
TTAACCCTTTCTATTTTGCCTTTAAGGAATAAAAATACTAAAAAATACTA
AAAAACAATATACAATGCAGTGGTTTCAAGGCGATGTCTCTGAAGCCATT
CAAAAGGCTATTAGTGAACAGAAGATGTTCATTGTCTTTGTTCGAGGTAC
GTTTTTTTCTTGCCGATTAAATTTTGTGTAATCAATCTTCTCGGTGTGGG
GTTATCAAATTCTGGTACTTTTAATTTGAGGTTTACAACCAAAACATAAC
CTTTAAAAGTATCAACTTTTATAGTTACATTGGATAAATCTGTTTTTCAA
TGCAATGCCCTGTAAAGCAACTATGTTTCTTGTGAAGAAGTAATCAACAG
AACATTAACAATTTCTTTTCAGATGACAAAGAAGAATCACAGAAAATGGA
AGAATTATGCAATTCAGATGAGGTTCCTTTTTTTTCTATACAAAAATTTG
CATCAAGCTTTTCTCTCCTGAGAGACAAATGAACATGTGATGTGAATTTT
TATTAAATTTCAGTTTAGGGTCTTAAAGTTGCTTTTGATAAAGACAGCAG
ATAACTATTTTATAAATCACTTGCATCTAAAACGTTTAAACCAATAGACC
ACAGGTCATTCAGGCCAATAATACATATATTTCTAACTATCGTCACTTCT
TTCTAGTATTAAAAGTTTGGTGATATAATTCCCTNCACTTGCATCTAAAA
CGTTTAAACCAATAGACCACAGGTCATTCAGGCCAATAATACATATATTT
CTAACTATCGTCACTTCGTACAATTCTTTTCTAATATTAAAAGTTTGGTG
ATTCATTTCCCACTATTTTTGTTTTATTTTGTAGGTTAAGAACATTTGTA
CAGATGATCTTTGTGTAGCAATTAACATCACGGTGGATAGTGAAGCAGGT
CAACAATTTGGTGCTATCTGTATCCTTTTCAAAAGCAAAAATTGACTCGT
TCAAGCTTCACAAGTAGACTTTAGTGTAGCTGTTACCACTTCTTACATCA
GTAAATATAACCACTTCTGCTGAGGGGAATTCCCTTCAATGGGAATAAAG
TTTCGTGGTTTAAAATTTTTTTCATATCCCTGAATATTTTCAATAAGTGA
AAAAAATTGGATTTGCAGCTTTGCCTTTTTTCGATACCTTGGAATCTCTT
GAAAGACTGAAACTACTGTTAATTTGCATACTTTTGGATCTACCTGAGGT
CCTATAAACCCTGGTATGTTCGTTCGTTCGTCCGTTCGTCCGTTCTTTCG
TTATTAGCTTTTCTCGAGATTGAACCATAGGAATTTTCTGATCTTTTGTA
CAGCGATGTTTAATCATAAAATAAACCCTCGAAAATTGTGTGAATTTCAG
CTAAAAACAATTTCTTTTTTCCATAAATGTAAGATTGTAAGACCATCATA
GGTAAAAGCTTTTTGCGAAAAAGACTTCTCGGTTAAAAAAATGAATCTTT
AGCTATAAGAACCATTATTCTTTTAAGCATATTACCTATTTTTTGACACG
TTGTTTTTATGCTTGTTTAAATTGCAATTTTGGGCATAAAAGATGCTACG
GATCGTAAAGGTTGGCTAACTACCACCTTTATTAGTTTTTTATAAGCATC
TTTCAATAAAATGTCAAGCTTTCTCGAACTTAAATGGTTTTTTCTAAAGT
TTATCATAAATTGAATCTTTTCCAAAGTAAAAAAATATTTAATTAGTTAA
ATATTATGTTCTTTAATATACCCTTGCTTTTTCATTTTGTATGTCAGTGC
TTTTACAACTTAATGATTGTCATATCTCATTCAGATAGTCACTACTACCT
ACGAGGGTGTCGGCAAACGGACGAGACCGTACGGGACCCCATCCCCCTAG
TGCCGGACACTGGGGAAAGGGTTTTAGGGTTTTCCGCTTCAAAAATTTTC
AATTTCATGTTCAATGTTCTGTAGATTAACCAAGTAGGTCCATAAAAGTC
TTGTTTGATTATTCATTCAGAACCATACAGGGACTGATAACATCAACCAT
AGACATCATTAAATCTCCATGTGGTTCACTTTACAAGTCATTAGCTGGCA
ATTCCAAATCTTCATAGCTAATGGCACGGACTTTATCCTCAAAGTTCGGT
TTGTCTACTTTCAAATATTGCCAATCATAGAGATTGTCGTCATACGTTAA
TAACTCGATGTAATATTTCGCTCCTTTCACCAAATAACGTGTGCATGAAA
ACTCGCTAAATTAAAAGAAAGATTTAGAAACGAATACCTACTTTAGAGGT
TTGTCACATTTTGTTATGTTACGTACTTTCCGCCATTATGAAAGCAAACG
TTCGATTTGTGTAAGGAATCGTCCCTACAGATTCGAACATTTGCTTCCTT
AATGGTGGAAATTACGTAACCTACAAAGACATGAAAAATCCTATTATTTG
AAGGAAAAAATGGATAAATGGATCATTAAAAAGCACTTCATCCTGCTTCA
TCTTCATTGCTTTTGATAGCTCAGGCTAGAGAAGTTATGTGTCTAACCAA
AGCCAATTTTTAGTACTAAATCATCGAAAAATGTGTATAGGCTAGGCTAG
GCTAAGCCTTTATCTTACGCTAAATTATTCGTAATCCTCTTAATTTCTTG
AGTAATTTTCCAGGCTAGGTGCTTTTAATATGTTCTTAGTTTTGTCCAAA
TTTCATGCCTTATTTATTTGTTATGAAGTTTCCTTGAATTTGATCGGATG
TTTTTTGTTATTTTACTGTATCTCTACGGGTATCTCGTAGTCGGAGGATT
GAAATAAGTGGCGTGGCTGGAATGAGAATCCGGGTGGTGAATTCTGAAAT
AAATTTACTGGGTACGCTAGCTAGTTAACCGAAAATGCTTCTGTTGCAGT
GATCAGAATTATACTCAAGACTAATGAGCAGACGAGAGTTAGCCTACGAG
CCTACTATGAAACACATCTTTATATTATATAAACTTGGACTATATTTTTA
TGGTGATCAGTTATATAAACCAAGAATTTCTGAGCTCACAAAATTTTATA
ACAAACTTACTCTTTTAGGCCACTATTCCCAGTGGAGCCTGTACAATAAT
ATTTCGACGTTTCTGTCTCATCTTTGCCCATGTAAAGTTTTGCGAAATCG
TTAGCCATCAAGTAGAATTTATATTCGCCTGTGCTTCTAGCTTGAAAAAC
GCTTTCCCATCGCATGCCATGTTGATCCCATGTTTTTGTGCGTTGAAAGA
AAACATCCATATAAGTGATTGAGGTTGGGCTGTCTTGTTTGGCTCTGATA
GCATTTTCAAAGTTATTGAAAGACAGTGTGTCCATCGATTGAAATATCGA
TACTTTGATGGGACCTTTATCTAAACGGAGATTTACAAGAAAATTTTGAT
CGAAAGAAAATTTTCTCCGACTTTTTTTTTCAATAAGGTTGATTCTCTTT
TCCAACGCCGTCTGATCAATAAATTAGGGTTAAAAATGGAATGAAGCAAT
ACTCAAAGAATACCTTCCCATTAAAGTAATGTCTTTAAGAGTAAGGCTGG
ACTTTAAAAATTCCAAAAATTTAAAAAGTCCAGCCTAATTAGAGGAATTA
TATCTTACCAAAATCGAAGACGATTTGCGCCGCTCTTGCTGTGCACGAAC
TTGTGAGGACCATATCCCATTCAGGAGCAATATTTCCTCCGTACGGCCCC
ACGCAACTGTCCTTTCCCCACTCCAAGAACCCACCTAAAAAAAGGTCGGT
TCTCATTAAATTAAACGTTAAATTACATAAGAAGATATCGAAGATATTTC
GTGCCTGTTCCTAGATACAATTCTTAGGTTTTTAGCGTCGTAAAGTAGCT
TCCTAATAAAATTCGATTTTAGCGGGAGTTTGAGGCTTAGCTAGAAATAA
ACAAGAGCCGCCAAGTTGTGGATAGATACGTATACTATTATTTAAGTATA
ACCATGAGCATTAGTAAGAAAGGGAATGAGAGAGAATAATTATGATTTCG
TTACCAAGAGTAGTTAAGTTAGAGCGATGACCGAATGGTCAAGACGTCAG
CGTCGCTCCTTCAAACGTTCCGTCTTGTTCATAGATAACTGAACCCGAAC
CGGATGGCCGTGGACCCCGTGGAAACAAACGAAAGACTATCTAAAAGCTG
AAAGTGATAGATTACTAAGCTATCCACGTTAAATATCGACCCAGAAAAAG
TTACGAACTAATCTTCGCTTACGTGGATTTCTACGGAATTTCTTACGCTT
GTCCAAATCCATAGCACTATAAGGACAATCCTGGATGTCAACAAGTTGGA
TGGGACCAGTAGTATCAGATGAAGGGCAGAGTATCTGTCCACTGCAAACA
TGCGTAATGACACCTGAAAAATTAACCATGATCATAGTGAATTGGCCGAC
CAGTATCTTTGCGTGATTATTAACCCTTTCCGTACCGATGTCGGCTTATG
TCGACAAGAGCATTTCCGATTTCTTTGCCGGTGTCGGCATTTTCCGACAT
GAGCGACCACAAAGTTAAGATCACATTTAGCTTAATTTTCTGAAAATCAT
TTCAATCTCATCACCCTCTGGTGACGCCACTGTACCTTCATTTTTTCATG
TCGAACCTTAAAAAATATGCACGGCAGTTAAAAGGTTAAAAAGAATACAC
GATTTTCGAATTCAAGTACATTAAACAAAACGAGTGACAAGCGGAAATTC
TCTATATAAAATATTGATAGACCTTCTTATTTCTCATTTGAAATCCAAGT
GTTCATTCAAATTTAAATGAGATCAAAGCAAAAACTAAAGCAAAAAAAAC
TAATTCGAGTCTGGCACATTATTTCACATTGGGCAGATTCTTTTACTTTT
TTACTTTATTGTGTTTGATTAAACGAGAGAAAATTGACTAGAATTGATCT
AGCATTGATCTATATTACTTCGAATAAATGAATTCTTTTAAACACCCCCT
CGAATAAACGCCCCAAAAATATAAAATAAACGCCCGGGGCGTATAAAGAA
AGTCAATCTATAATTCATGAGAAAAACAAAAAACTTTTATCAAATTCGTG
TAAATATTCAAACAAAAGCTATGAAAATGTCTTCAATGCCTCACCAACAG
TCATTATTTCACAGTGTTAATCCTTTGGCGGTGGGGGGGGGGGGGGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAAAAAAAAAGTTCAAGCTATAAAGATTAGACTCACCT
GCCCAGCTTCGATCGAAATCAAAGTAAGCTGATACACTTGTGCACTTTAA
GCTTGATATTGGATGCAGTTCAATATTACTTGTAGTGAAATCACATTCGT
TGGCTCCTATTGGTGCGTAACAGTACCCGTCCGGATGCTTCAGTCGAGTT
ATTGAACTTTTACCTAAAAATACTTTTATACTTTAGGCGTACATACTGTA
CAAACTTTCGCGAGCAGAAACTTTTACGAGGTCAAAAAATCGCGTAATTT
GCGACATTTACTTTCGCGAATTTAAGAAAAAAACATTTTTCGCGAGCAGA
AAAGTAGTAAGACCTTCAAAGAAGATTTTGACCATATTTCAAAGAATGTG
ACTGTTTTGCCATTTTGTTTTTAGAAAAATGCATATGTAGTCCTCCCAAT
ATTATTTGGGTAATGACTTTTTTACTACCTGATATTGCCACAGTAGTAGT
GTCACAACATACGTATCATCTTTGTTTTGATTAAGTTGAGAGTTTTATTT
CGTGTTTTTCAGGAGAAAAACTAAACTTGGGAAGTTTAGAAACCGAATGT
TCTGTGCTCTACCTGCATGCTACGGCCGTCTATTTTCGAAACCTCTTTCG
AGATAAAATACCTCCTTGAATTTGTCTCGTAAGCGAACCTACCTGTATCA
AGGTGTCTCCATCCAGCTCGAGTCACATATTCATTTTGATCATCAATATC
TTCATCTACAAGTTGACATTTGCTTTTCTCCAAGTCTGTTTCATCCTTAT
AGAAACTCACTGATTTACATTCTGTCTCTGTAACACAACGATCCACGCAC
GCCGCTTCTTCCTGCGTGTAGAACTCTTTATAGTGTGATGTAACATGGAC
TTTATCTGTATGTCTCAATATGAATTTTGCTAAACGAGTGTCTTCGAGTC
TTAAGATGTTGTGAGCAGAGATTATATCGAGATAGAAAAAGAGTTGAAAG
AGTAAGTCCTTGTATCTCATCATTCTTTTCGTTCATCAAATAATTGAAAT
ATTTTCGATGGTCACTTTCGATGGTTATTTCATCTTGTTTCGACAATGTT
TAGGTATCCCTTTATATATTTTCGTGAATTTATTTACCAATATACTCAAA
ATGATTCGTTTAGCATTTTTCTCATTACCAAGATAATGTTTTCATGTATG
ACTTCTTTTTTTCACCAAGAACTTGCCTAGAAGCTGTCTTACCCAAATCT
GGAATAAAATGAAATGAAATTGAAAAAATGTCTGAAAAAATGTTTGATTG
TATAGAGAGAAATTGCTGTCAGAACATCTTCTTAGAGAGTCTATTCAAAA
ATTGCATCTGCCGGTATTTTGGCGAGAGAATTGAATACGTCCAATCTTTT
GGGGCCGTCTCATTTGCTTCGCTACCATGTCGATTTAAAAGTTGAAAGGG
AAATGACAAAATTTCACAATATGACACCCATGTTTTTTCCTTCATTAAAT
ATTTGGAATATTTTCCATGGTCACAATACCTCCTGTTGTTGTGAATTCAA
TAGTTTTGAACGCTTCATTTGAATCATTTTAATCGAAAGCAACTCAGCAC
CCTAGCTATACAATACATGTCGTCTGGAAATTTTGTTTTTCGAAAATTAG
AATATTATGTTATAACATTTAACCTATTTTTACACCCAAACACATGATTC
GTGAATGACTTGTTTTTGGAAGAATAATTTCAAAATAGATATCAATTAGA
CAGAACATAAGAACACCTTCAGAAATGCTGATTTTTAACCACTGACAGAT
ACTTACCCCCTTATGTTTCAACACTTCTTTCTCACAGACCCGTTTGAACA
CCTTCCTACTGGAACAATTGGACAAAACTTCGTCCCCAGAGGAAAATTAT
ATATATTTCAATTTTTGTCCACACTGAAAATGATCAAATAAACAAATCCT
CACTGCGACACATTGCGCTATTTTTTTCATCCCACTGAATTTTTAACTTG
AAAACAGTGGAATTCAAATCCCCAGCCATAAAAAACATGGGTGTATCAAT
CCCCGTCGAGTCAGTTATTTTAACCCCCACTGGCTAAAAGGACTGCACGT
ACGGTGTAGAGGTCGGTAACCTCCCCCCCCCTGGGATTTTTTTCTGATTT
TTTCCATAAAAGTAGGTTGTCAGTATAGGTAAAAGATGGCTGAAGCAGAT
TTTTGAAAGAAAAAAAATTCTCTGCTCAAAAAATGAATCATCATCTATAA
AAATCATTTTTTATAAGCATAGGTCGATGTTCCTAATCATTTTAAGTAAG
CGAAATTGCAATTCTGAACAACTTTTTTTAAATGGGTATGTGATTTGGGT
CTATTAACATTGCTTTCAAGTTAGAAGAATTAGCTTGATCTTTATTTATA
AGCATATTGCTAATTAATTATTCACAAGCTTTCTTGGTGATTGGCTCATT
CTTATTTTCTAATTTTTTGCTCGATACCTAGCACTTGTTAAAATTTCAAG
TCTATAGCATTTTCCAATCACTAGATACCTGGGGCTGATATATAAGCAAA
AAGGGCAAATTTTGATCGGTCTGTAAAATATACGATACCAGCAGATAGCA
ATAATATACATGTCACGTGGAGTTGCCTTACAAAATTTGAGCAAAAAAAA
GTTTTAGGGGATGGTCCTACTTTGGCATTTTCAAAGAATGATGACGTATC
AATTATGCCGAAATTTTCATTAAAGATGCCAANTACAAAATTTGAGCAAA
AGAAATAGAAGTGAAAAAAAGTTTTAGGGGATGGTCCTACTTTGGCATTT
TCAAAGAATGATGACGTATCAATAATGCCGAAATCTTCATTAAAGATGCC
AATTTATATTTGGTGCACATTCATAAAATTTAAGTCAATAGGATAAATAC
ATCAAAAGTTTTCTTTATGGGGGCCTCCTTGCACCCCACCCACCCTCCAA
GATGTGTTCAATGTTCTTTAGATTGACCAGGCTGGTCCATAAAAGTTACC
CTTATTAGTTTTAAGAATTCCTTGACACAATTTCAATCAGATCCCATTGC
ATTTTTACCATGCACCTTCTTCATTGAGAATGATGGCATCCCTGCTGCAA
TCTTCCCTACCATGGAAAAAGACAAATTTGTTGAGAAAACTGAAGAGCTA
ATGGCGGTATGTAGCATTTTTTGGGTATAATATAACTAGCCTTCAATAGC
TTTCATTTCAAGTTATTGGAAACTCAGAAGTGTTCCAACTGTTTCAAGTA
ATATTCCGCTACTCGGGTCCCCTCTAAAACCACGAGTTCCTCCTAGGGTG
CCTTTTTCTGAAATGTATTGGAAAAAAAGGAGAACTCAAGAAAACTTTAG
AGTTTCAGTACCATTCAAAATCGAGTCCCACTCAGTACAGTATACACTTT
TCAAACCTCCGTACCACATTTTTGCCAGTTGCAAGGGTAATATGAAATTG
ATTATATCCTCCTCTATGTTTTTTCAAGGTGGTAAGAAAATTGAAAATTG
GTGAATCCCAGAAACCAGCTTCAGAAGCACAACAGCAAGACTCACCTTCA
GAAACCACAAGCAGCGATGCAGTTGGAAATAAAGTAAGTTTAGTAAGGAA
CTCTATAATATTAAAAGAAGCAATTGTAACCAATTAATTTTATATTTTGC
ACCTTTAGGCAAAATAAAGAAATGTCTTGTTTCAGGAAATCGGCCGGGTG
AACTTTTTAAGAGAGTCGCCCGGCCGCAAAAGAAAATATCAAGACTATAA
GAAAAATCTAAAAATCTAAAAAAGATATTTTTATGCGGCAGGCCGGATGA
GTTTTTTTCGTCACCCACATTTCCGGAATAAAGTTTTTTTTTGGTCTTAC
AACACCCCAGTAATTGGACTCTAAATTTTAAGATTCCATCAAGTAGAGTA
CGATTGACATCAAACTCTTTCTGAGCCGTAACGAACTTCAAGTTGCTATA
TCTCTTCAGATCTCTTCACTGTTTTACTAAGACCATTTCTGTCCGTTCCT
GCTTTGAAAAATAGTTGTTTCTAACCAAATTTTGGGGATTAGGTTTTTCG
TCTGTCTTTGTGTTTTCGAGCTAAATACAAGCGGCTGCGTCCCACGAAAT
ATGTTGAGGATCTTGACACTTAAAAAGTATAAGATGCTTTGCTTTTTCTT
TAATATCAATTTATCACCTGATCTTTGTAGGAGCCAACAAACTCAACTTC
TGCAAGCGAAGAAGAACTCACAAAGAAAGAAAAAGCAGACCTCTTGATCT
TAAAAGCAAAAGCTAAAAAAGCTCAGAAAGAAAAACAAGTATATCTTATT
TCTTCACTTTACAATTCTCCCTTCTCTAACTCTCCACTCTAAATGTAAAG
GCTATCGCACCCTTGTCCCAAAAAAATTTCAAATTTCAATTTCAACGAAT
GAGGAATCAATAAAGAAGACTTTTAACATTTTCGGAATTCAAATATTATC
TCAGCGTGATTGTTTTACTTTAGCCAATCGTCGTGCTCAAAAGGTCATTT
GATATTCATCCCAATGCTAGAAGAAAAAAAGCTCCAAGCGGTTCATGGAC
TTGTGTAAATTCTCGTACAAACCTATGGTCTTTAGAGTGCATACGTATCA
GTCTAGTAATTAGAATATGCATAGAGTTGAGTCTCTTTATTTATGAATGT
TATTGATTTTAAAGATCTTTTTCTTTTTACTCTTTTTCATTTAGGAGGCA
AGAGAGCGTGAACAAAAACGAAGAGACGAAGGGCGCGAGCTTAGTCACGC
AAGACGTGATCTAGCAGAACGACAAGCCAAACAACTAGCGGACGATCTCG
CTAAGAGGCGGGAGGAAGAACGAGCCGCGCGGGAACGAGTAAAACAACAG
ATCAAACAAGACCGTGAAGACAAAGTAGCGAGATTTGAAGCCGAGAAAAA
AGCACGAGAGGAGACAAAACAACAAAAAGTTGCAAAAAAAGATGCAGAGA
AAGAAGCGAAAGCACAAGCTGTAAAGGCGGCAAGAGAGTAAGTCAATCAC
TAGGATTCTGATCTAATTAGACTAATTCACTTGAGAGTGGTTGGGATCGA
AAATGGTGAACTCATAAAGTGGAAGGACTTTAATTTCATCCTGTTCGAGC
TGAGAAAGAGTACGAGTCGACAGTTATTTCCGAACGGAAATCAATTATTG
AATCCTACAGATATTTTGAGACCATTTCAGAAAGTGACTTGATTCTTTAT
CATAAATGTTTATAGAGAAATTTTAAGATAAAATATTTCACATTTTTCAT
TCTTCATCTTTATTTACAGTCAACTTTCTCTCTCTAATTCGAACCTCTAT
TATTCGAATCTTTTTGTAATTCGAACTAAAATAATGATACCCTCAGCTTG
AAAGTAGTAAAAATTAGTCTCTGTAAGTCGAATCTTTCTCTAATTCGAAG
AAAATGTTTGGCCCCGTTAAGATCGAATTAGAGAGAGTCAACTAACTATA
CTTCAAGCTTGATGGTTTCAGATTGAAACCGAAGGGGTTAGAGAGGTATC
TCCAACCTTTCTCAAGCAATAAAATATTAAGCCTTAAGTTTGCCCTGCAT
TTGGAAATTTTGTTTAAAAAACACGCGGGTCACGTGTTTTGGATGGGAAA
TAAGTGGTTTAATTTCACATCCAGGAGTTTCGGATCTAGTCCCATCGGGG
CTTTGAAATAAATGGTGGTACCCTTGTTGCTTAAACAACTGTAAAACATT
TTTTACTTTTTTCCAGCGCGGCAGCTCGTATACAGTTTCGACTACCTGAC
GGTTCAACATCATACAAACAATTTCCTTCTGATGCCAAATTCATTGTTGT
TGTCAATCACGTAACAAAGGTAAAGGCAACTCCCTCTAATTCGAATCTCT
ATTGTTCGAATCTTTCTGTCGCTCGAACTAAAACATTGGTCCCCTCAGCA
GCTGGAAAGTGGTTTAAAAATTACTGTCTGTAATTCAAATATTTCTCTAA
TTCGAAGAAAGCTTTTGGTCACTTGAAGATCGAATTAGAGAGAGTCTAAT
TCTCATCCCATCATCGTAGTGTTCTAGTGTGTTGGTTCCCCTCTCGAAAA
AGGTAAACAACGAAAAAACGATCGCACGAACTTACTATATTATACTTTTA
ATACTTCCAGGAACTGGCGCCCCACATTCCAATTGTTCGTTTAACAACAG
TCTACCCAAAACACGAATACACACAAGAAGATCATTCAAAGTCCTTACGT
GACCTTGGCCTCTCTCCAAACGCGTCCGTTATCGTTTCACACGTAAGAAA
TCAGGGCATTCTATGCCGAGTGGGCTCCACATATTTTTTTAATTTCCTTT
TTATTAAAGAAGAAATACCCTGTTATGTTATGTTCATCTGAAAATTCTCA
AACCATTTTACTAATTGCTGTTAAGTGTTATTTGTTTGTAATTATACTGT
AAGGGTTGTTTATAATTACATACAGTAGTCTTCACATAACTTGAGCCTCT
TTATACAGTGGCGGATCTAAAGAGGTTCCAGATCTACGACGGAGAGTCTT
CATTTCCATATAAGGAGTATGGAAAAAGAAACACTCTCCATCATAAATTT
TGATCCCTCCCCTGAGATCTTCTTAACTCTAAAAGATTTCCTGTCCCTTA
AGTTAACCCTTATAAACCAGTTTTCATAAGTCGAATCAATCAATAACTCA
AACTGACTTCAAATCTATGTGCATGTTTCAGTCCACTGTATTTTCAGATA
ATTCATAATTTCCATCTTTTTTTATCAGGGTCGCGCGTCTTCATCTTCAT
CCTCCTCACTCAATCCAATCTCCATTCTTATGACAGTTTTGGCGCCCCTT
CTAGCTCTCATCTATTGGTTCTTTTCACTCTTCAAATCTACACCGACCAC
CACAACACCTAATGACGCGCCATCTGCTCAACAACAAGAACCTTCTTCTA
TCTCGACAAACGACCATAGGTATTGTTTGACAGTTCGTTACTTATTTGCC
AGATGTAATTAATAATTTTCTGAGGAGATCGTTAAAAGATTGAAAATCAG
CTTATATAAAAAAACAATCGAAATAAGGCTCTTCATATAGGAGATCTCTT
GGCCTGGGGCAAGGAAAAGAAAAAAAACTGTGTGCTCGAAGTGATAAATG
CTTCAATGAGAAAAATACCTGGTGCGCCACAAAAAAGTTTCTCTCTTTGA
AACTAATTTTCTCGAAATCTAAAAATTTTAAAAGAACCTTCCTACTTCGT
TGGAAAGAAGAAAGATTTTGGTGGCTCATTTATTAAATTCGATTGATTAG
ATCAAATGCTTAATTGAACAAAGAATTTACTTTCAAAAAGTGCTCGAAAA
CGTTAAAAATCGACCTATCAAAATTTTAAAGATCGGAAATCGCAATAGTC
TTTACGTGATTAAGAGCATTTTTCAGTAATCTTCATCAAATCACTTTAAT
TTGATTGAATGAAGTCTTTGTAATGCTGGATGTACCTCGAAACCCATATT
TAATGTATTTTTAATTGTAATTCAACCTTCCCTTTATATAACAAAGGTCA
TTTATACAGCTAATCGCACGATGAGTTATTTTTTCTCGCGCCCTTTCAAA
GAGAGCAATTAATCGTTAATTGCATTCTGTAGAGAGCAATTAATCGTTAA
TCACACTCTTCAATGACGGGCCAATGTTTACAAAATCGATTTTAATGTTT
TTTCTTACATTTTTATTATCGAACAGTTTAATTGCATTCGAAATTAATTT
TGTGAGAAAGAAAATCTATAAGCAAAAGTGAGAAAAACCAACATAAAGAG
AAGAGAAAAATGTAAACTTTCAGTCTAATTTTCTTTCCTGACGGGGAAAA
AGGCAGTGAAACTGATTGTGCGATTAGCTCGTAATCACATGATAACTCGT
GCAATTATTCTCGAATTACACTCGTTATCATGTGATTACATATACTAATT
ATCATTTTTAATGACTGAAACGGAAATAATGATGCATCATGTAATTATGC
TTCTGTTTAATTTGATAGGTCGATTTTTAACGTTTTTGACCACTTTCAGA
AAGTTATTTTTTTATTCAATTGAGCATAACTTTCGATCTAATGAACCGAA
TTCAAACAATGACCCATCAAAATTTAGGTTTATCTTTCTTCTCTCCACCG
GAATATGTATGGTAATTTTAAGACTTTTAGATTCGAGAAAATTAGTTTTA
AAAAGGGAAACTTTTTTGTGGCGCACCTGGTATTTATGATGATGCAGTTT
CGAATGGCGCCCTTTGAAATTTTTAGAATGCGGCTATATTTTTCTAAGTT
TTTTATGTTTCAACCATCAAACGATATTGCCGACCGTCAAATGATATTTC
CGACCATCACGCTAAGATATTGCCGACCATTAAAAGATATTTCCAACCGT
ATAAAGAAAAGAATTCGCGGCGTCGCACGCCGGTTAAGCTGTAGCTGAAC
GCACTAAAAGTTCTTTGGATGTTGAAGGTGGCTTAAAAGCACGATATAAT
ATAAGAAAATGAATCTCAAAGTCTGAATACAAAACCTTCAAAGTTTGACT
CTAGTCCTCCCCTGGGTGGCTTATCTTTTAACCATATTTGGATTGTGTAC
TGTCCCCGTGACTTAATTCTTTGTTTTTAAATCTGCAAGTAGATTTTTGC
ACCTGGTATTTATGATAATTTTCCAGCCTACAAATTTAAATTTAAATTTT
TGTTGTTGTTTGGTACTGAAAGTATCAGAAGTCCACATTGCTTTCTCTCG
AGGCTTGATGACTAACTTTTCACGATTTCTGTCTGTTTACGCATTTTCCC
TTCTGTTCGAATAATCTTATTTGCTTTATAGGGATGCGTCAGTACGGAGG
CGTAATTTGGGCGGTGGATCTAACATCAGGCGTTTATATGACGACAAGCC
AGATGATGAAGACAACGCCACATGGAATGGAAATTCAACACAACAAATGT
AGTAGAAAAGATATTCAAATTGTCAGTAGTAAGATAAGATTTATTTTAAT
TGTTTTGTTTGTTTGTCTGTTACCAGAAATAGTATGTTTTTGGTTAATAA
TTTATCAAATGGAAAAATTGGTTGAAAACCCAGCGACATCCGAATTGGCC
AGTGTTGGTAAAAGGGAGTTGTTGGTTCCATTGGATGCTGAAAGATTGTT
AAAGACAATTAATGGTAGTTTGATTTTTAGATACATAGAACACTCTTCCA
TTATTTTGAAATTTGAAGGAATTGGGCCGTTAAAAATCATGAAATAATCT
CTTTGGAGACTTTTTGAAACTTACTACCTACTGTTAATGAATAAAATGAT
ATAATGCTACCCAACAAGACATTTTTAACTGAAGATTAAAATGGCGACAG
AAATTGAGGAACCAATTGAAGCAACCAAGGTCAAAATAAGAATATATTAA
ACTCCTGAAAATTGGACAAAATCGCACGGTTGTCTATACGGTATTAAGAA
TTATTCGTTGTGTAATGGTTTATGAAACTTCGAGGTTCGATTTTCTGCGA
ATGCAAAACACTCTTTAAACCTATTAAAAACCATTATGAACATTTTGTAT
CTTTATCAATAAAATATGCAGTAGATGTTGGTTTCCAAATTTATCATTAT
TTATATTTTGAATTTTACGGTATAATTATATTAGCATATAATATAAATTT
TTACGTTATATTTTGGAAGTTTTTCTCGCCTTTCGTAAAACAAAATGATT
ATCCAATTATCGCAACAAATATGCGGGGAGCTTCTAAATGATCATAATAT
GTATAGTGTAGAGAAGACTATTATTATGGATCTAACTTTTTTTTCCAAAT
TTCATAATGTGGCTACGTTGCGAGAGATTTATTTTGTATTTTCAGGTAGT
TTTCATTTGCAGAACTTAGGTTATGTTTTTAAATAAACAACGTCAATTTT
CAAGTCTAAGCCTAAACTTGAAAATTAACGCTAAAGGTTTTAGTTTTACA
TAACTTTCCCATTAATCTTCCACAAATTTTCTCCCCTTCGCTATTATGAA
TTTGTTGTCGAATTTGCTGGAAATATTTTTTATATATTATGATAACTTGA
TATCTATATTGTATAAAATTTGATAAATCAATCACGCAAACTACAATGAA
AATATAGATTATAAAAGCTATAAATTATGAATCAACGAAACTTATATCTT
TTTCATTTTTATGGGCTTCTTGATCCAAAAACGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007292XLOC_007292Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013011-exon-sc0000161-1575043694:316000..316145TCONS_00013011-exon-sc0000161-1575043694:316000..316145Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:315724..315773TCONS_00013011-exon-sc0000161-1575043694:315724..315773Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:315227..315311TCONS_00013011-exon-sc0000161-1575043694:315227..315311Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:307740..307855TCONS_00013011-exon-sc0000161-1575043694:307740..307855Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:307313..307417TCONS_00013011-exon-sc0000161-1575043694:307313..307417Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:306608..306715TCONS_00013011-exon-sc0000161-1575043694:306608..306715Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:305909..306201TCONS_00013011-exon-sc0000161-1575043694:305909..306201Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:305077..305179TCONS_00013011-exon-sc0000161-1575043694:305077..305179Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:304654..304785TCONS_00013011-exon-sc0000161-1575043694:304654..304785Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:303977..304167TCONS_00013011-exon-sc0000161-1575043694:303977..304167Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:301968..302114TCONS_00013011-exon-sc0000161-1575043694:301968..302114Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1575043694:300762..301765TCONS_00013011-exon-sc0000161-1575043694:300762..301765Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:316000..316145TCONS_00013011-exon-sc0000161-1510915933:316000..316145Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:315724..315773TCONS_00013011-exon-sc0000161-1510915933:315724..315773Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:315227..315311TCONS_00013011-exon-sc0000161-1510915933:315227..315311Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:307740..307855TCONS_00013011-exon-sc0000161-1510915933:307740..307855Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:307313..307417TCONS_00013011-exon-sc0000161-1510915933:307313..307417Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:306608..306715TCONS_00013011-exon-sc0000161-1510915933:306608..306715Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:305909..306201TCONS_00013011-exon-sc0000161-1510915933:305909..306201Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:305077..305179TCONS_00013011-exon-sc0000161-1510915933:305077..305179Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:304654..304785TCONS_00013011-exon-sc0000161-1510915933:304654..304785Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:303977..304167TCONS_00013011-exon-sc0000161-1510915933:303977..304167Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:301968..302114TCONS_00013011-exon-sc0000161-1510915933:301968..302114Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1510915933:300762..301765TCONS_00013011-exon-sc0000161-1510915933:300762..301765Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:316000..316145TCONS_00013011-exon-sc0000161-1491911889:316000..316145Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:315724..315773TCONS_00013011-exon-sc0000161-1491911889:315724..315773Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:315227..315311TCONS_00013011-exon-sc0000161-1491911889:315227..315311Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:307740..307855TCONS_00013011-exon-sc0000161-1491911889:307740..307855Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:307313..307417TCONS_00013011-exon-sc0000161-1491911889:307313..307417Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:306608..306715TCONS_00013011-exon-sc0000161-1491911889:306608..306715Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:305909..306201TCONS_00013011-exon-sc0000161-1491911889:305909..306201Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:305077..305179TCONS_00013011-exon-sc0000161-1491911889:305077..305179Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:304654..304785TCONS_00013011-exon-sc0000161-1491911889:304654..304785Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:303977..304167TCONS_00013011-exon-sc0000161-1491911889:303977..304167Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:301968..302114TCONS_00013011-exon-sc0000161-1491911889:301968..302114Clytia hemisphaericaexon
TCONS_00013011-exon-sc0000161-1491911889:300762..301765TCONS_00013011-exon-sc0000161-1491911889:300762..301765Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000161supercontigsc0000161:300762..316145 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.92998	4.46012	0.379363	0.610009	2.89068	2.43973	6.49953	7.54847	2.25399	1.72448	2.00488	2.39936	2.16312	2.73503	1.47297	1.58481	3.01465	3.45539	0.941819	1.81128	1.25377	2.425	2.89459	2.16927	11.523	9.21925	1.27746	1.32322	3.05309	2.84857
Blast
[Close]
BLAST of TCONS_00013011 vs. Swiss-Prot (Human)
Match: UBXN4 (UBX domain-containing protein 4 OS=Homo sapiens GN=UBXN4 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.620e-25
Identity = 108/282 (38.30%), Postives = 154/282 (54.61%), Query Frame = 2 
Query:  638 RDEGRELSHARRDLAERQAKQLADDLAKXXXXXXXXXXXVKQQIKQDREDKVARFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQFRLPDGSTSYKQFPSDAKFIVVVNHVTKELAPHIPIVRLTTVYPKHEYTQEDHSKSLRDLGLSPNASVI-VSHGR--AXXXXXXXLNPISILMTVLAPLLALIYWFFS--LFKSTPTTTTPNDAPSAQQQEPSSISTNDHRDASVRRRNLGGGSN-------IRRLYDDKPDDEDNATWNGNSTQQM 1447
            R  G+E+   +R   E   K++ ++  + + E+RAARER+KQQI  DR ++ ARF   K+  E  K   +  K AE E K ++    R   ARIQFRLPDGS+   QFPSDA          + +        L T++P+ E+T+ED+ K L DL L+P+ASV+ +  GR  AS   SSS +  ++L TVL P LA I+   S  LF + P T T     S++   P+S S ++ R+  VR+R L    +       I RL      +++N TWNGNSTQQM
Sbjct:  229 RKTGKEMLDYKRKQEEELTKRMLEERNREKAEDRAARERIKQQIALDRAERAARFAKTKEEVEAAKAAALLAKQAEMEVKRESYARERSTVARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVLLPAGRPTASIVHSSSGDIWTLLGTVLYPFLA-IWRLISNFLFSNPPPTQTSVRVTSSEPPNPASSSKSEKREP-VRKRVLEKRGDDFKKEGKIYRLRTQDDGEDENNTWNGNSTQQM 508
The following BLAST results are available for this feature:
BLAST of TCONS_00013011 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBXN43.620e-2538.30UBX domain-containing protein 4 OS=Homo sapiens GN... [more]
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