Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013376 ID=TCONS_00013376|Name=TCONS_00013376|organism=Clytia hemisphaerica|type=transcript|length=1118bpRun BLAST on NCBI transcript from alignment at sc0000167:211822..231909+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00013376 ID=TCONS_00013376|Name=TCONS_00013376|organism=Clytia hemisphaerica|type=transcript|length=20088bp|location=Sequence derived from alignment at sc0000167:211822..231909+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00013376 vs. Swiss-Prot (Human)
Match: QSOX1 (Sulfhydryl oxidase 1 OS=Homo sapiens GN=QSOX1 PE=1 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 4.853e-31 Identity = 78/267 (29.21%), Postives = 128/267 (47.94%), Query Frame = 3 Query: 111 SSLYDDTDPMVQLNNETIYKQLEGSKKHWIVEFYSSWCGHCQQFAPTWKKLAWQVKNWQNYVNVGAVNCADQSNFDTCVSFGIGAYPTIKIYKPNWIRPPNKEEEDDTGKIRDFRQKEKRKIKDADESLGIVYKGDKKIDSIKRSLIDVMETQQSKFTFASYD-EIMKLTSPAIDTYL------YLFVVFESKDSYIGKNLILDTSSSQKAIVRRVDFTNEILTKKYDIFKNPS--LVSVNLNNKRAEVLKPDGEKYLHFVDALNSV 884 S+LY +DP+ L +T+ + GS+ W VEF++SWCGHC FAPTWK LA VK W+ + + A++CA+++N C F I +PT++ +K ++ +G + + AD + +++ LID +E+ + A E KL ID + YL ++FE SY+G+ + LD S + VRRV T + +K+ + PS L+ N + R VL Y ++ L+ + Sbjct: 33 SALYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWKALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFK--------AFTKNGSGAV--------FPVAGAD------------VQTLRERLIDALESHHDTWPPACPPLEPAKLEE--IDGFFARNNEEYLALIFEKGGSYLGREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRLSGL 269 The following BLAST results are available for this feature:
BLAST of TCONS_00013376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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