TCONS_00013410 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013410
Unique NameTCONS_00013410
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2933

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013410 ID=TCONS_00013410|Name=TCONS_00013410|organism=Clytia hemisphaerica|type=transcript|length=2933bp
gaaattttgatgttgaTATAAAGAATGTTGTAGAATATGgCATGGTTTAC
TAAGATGAAGCAACAACACCAACAATGTCATCAACTTCAATAACATTAGA
TACTTCATCACACCAACTCAATCGCTCATTGGTCGATATCATTTGTGATC
CACCAAACTTCCAACCACCAAACCTCAACAACCAGAACACGCCAACGTCA
AGACAACAAAGTCCTCAACATTGTTTACGTGATATCAATCTCACATGCGA
GCTCtgccaaaaatatttctataaaCCACGCATCTTATCCTGTCTGCATA
CCTTTTGTGAAGAGNTACATGTGAGCTCTGCCAAAAATATTTCTACAAAC
CACGCATCTTATCCTGTCTGCATACCTTCTGTGAAGAGTGCTTATCAAAC
AACATCACCTATGTTAAGATACCAGGCTATGAGGGAACACAGGCCATCAT
TAAATGCTTAATTTGTGGTGAATTTACAAGCTTTCCAGAGAAGAATCTAA
CCTCAATGTTACCATACAATTTCTTTGCAAATAATGCTATAGACTATCTC
ATGatacaaagtcaaaatgaaaaagCAATCCAATGTACAGCATGCTCTGA
TAAAACAGATGCTATCTCCAGATGTGTTGAATGTTCTGAATTTCTATGTT
TGTGTTGTGTGACAGCTCACAGGAGAATCAGAGTAACGAAAGATCACAAA
ATCATCCCGTTGGATACTTTGAGATACGACCAAAGCATGGTTCATAGGCC
AGTCTATTGCCCAACACACTCACCAGAGGTTTTTACCTATTTTTGTGAAG
TTTGTAAAGAACTGGTTTGTAAGGATTGTACCATTTTAGAACATCGTGGA
CATAAATATGAAAGATTGAGTGAGGCATTGGAGAATCAAAAACCATCAGT
CATGAAACTATTGGCAACCAACGAGAAAGAAAAAATCCCGCCCATAGCGC
GCGCACTTGATGATGTCCAAGATATGGCCGCCAGATTACACGCGCGGACG
ATTGCAACAAAACAAGCGGTCCGCTCGTGTACTGAACGTTGTATAAGAGA
GATCGAAGAACGTTGTAAGATTTTGCTTTCAAATATTGATAATTTGTATC
GAGAGAAGAGCGACGTGTTACATAAACAACAGGAGGTATTACAAGaaaaa
ctGATGAAAAACAAGGCAGCGAATCAATTTGTGAACTATGCATTCCAACA
CGGAAGCGAGGCGGAAATATTTGAATTGCTAGACCTGATGAAAACTAGAC
TGACCGATCTCAATGATGAGGACTTAGGCTATGATGAGCCTgaagaaaat
gacgtcattgatcACCAGTTTGATTCCAAAGCTGTCGAACACATAGCTGA
AAACCTCGGTAAAATTGCCACATCTAGTGTTTTCTTATCATACACAAAAC
TCTATGGACCAGGTGTGCGAACAGCCAAAGCAGAGATCGAAACATTTTTT
ATGATAGAAGTTTTTGATCGAAAGAAGGAGCGCTGTTGTGATCATTTCTC
ACCGGGCGCCATTAAAGTTAAAATTCACGCACCAGAAGGGTTCTTAATCA
ACAACAAGATCACTGATAATCGTGATGGTACTTTTACTGTTCGGTATACT
CCTGTCACGAAAGGTCGATATGATGTTACCGTCAAAATCAGGGGCAAATC
ATTTCCAAAGAATCAGTTCTCTGTCAGAGTATTCGAAGGCATTGATTATC
TCAAGATCGGCAGCAATTTTTTATGTTTCGGTGAGCGTGGCGTCAAAAAC
GGTGAATTTAAACAACCCTATGGAATTGCAACAAATTCACAAGGTCAAAT
CTACGTGACCGACAAAACTAACAATCGAGTACAAATCTTCGATAAAttcg
gcacctttctatcagAGTTCGGATCACGTGGTACAAAACAAGGTCAATTT
TCAGGACCGGAAGGAATAGCAGTTGATCAAGCAGGCATGATCTTCGTAGC
TGATACAGAAAATCATCGAATACAAGCTTTCAATGCAAATGGAACATATC
ATTCAAAGTTTGGTACAAAAGGTAGTGAAGAAGGAGAGCTTCTCAGTCCA
TGCGGTATTGCTATTGATAAGATCGGTAACATATGTGTGGCTGATCGAGG
CAACCATCGAGTCCAAGTATTCACACCAGAGGGTAAAAGTTTATTATCAT
TTGGTTCCTATGGTGACCAATACGGACAATTAAATTCACCGAGTTTTCTC
GCCATTAACAATGATAATTGGTTCATTGTTGCCGACAATGGGAACAATAG
AATCGTTTGTTATGATAGCAATGGGTTGTATGCTCAAGAGACTGGTGCCA
AGGGTTCGGACCCAGGCGAGTTTTCTAAACCAAATGGTATTGTGGTCGAT
CAAGAAGGTTTTATCATAGTCTCTGATACAGGAAATAACAGGGTGCAGGT
GTTAACGCCAGATTTGAAATATTTCAGTCAATTTGGTTGCCATGGTAATA
ATGATGTTGAATTTAAACAGTTAACTGATGTAGCTTTAACTCAAGATGGT
AGAGTTGCAGTGAGCGATACAAACAATTACAGGGTACAAGTGTTCTAGTA
TTATTCATTAATTTTaaaaaaaattaatattggTATATTTTATGCGTATG
GCTTTTGTATACTATTGaatataaaaacaattaaaaataactGAAATAAA
GGATTCTTTGTAAATATCTAATAAAGTTATTAGTATCTTAAAAAATTTCG
TATTTGCAATctataaacattttttataagcaaccgaatTGCTAAGGCTC
CAGCTCTGAAAGTAGCCACAAAATTAAGCAACTTGGTTTATTAATCTTAG
TCCTGAAACGAATATGAACAAAGAagtcatcaaaaatgaaaattgacatC
GAAATACCTAACAGAGGTGTTATAATATTACTTTATTTGAGGAGTTTCAG
GCATAATATGAGgtgaaaagtgaaatttttcgg
Run BLAST on NCBI

transcript from alignment at sc0000167:82405..88187-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013410 ID=TCONS_00013410|Name=TCONS_00013410|organism=Clytia hemisphaerica|type=transcript|length=5783bp|location=Sequence derived from alignment at sc0000167:82405..88187- (Clytia hemisphaerica)
GAAATTTTGATGTTGATATAAAGAATGTTGTAGAATATGGTGAGTTATGA
AAAGATAAAATGTTATTCCCATATTTATTATGAACAGGGATTCAATTTCT
TTTGTTTTCAAGTCAAAAAAATTCAGTGGGATTAAAAAAATAGCATGATG
TTTTGCGGTGAGAATTGGTTTATTTGAATATTTTCAGTGGGGACAAAAGT
TGGAGTATAATTTTCCATCAGGGACGATATTTTAACCAAATTTTTCAGTG
GGAAGTGTACCCAGTGGGTTTGTGAAAAGGGGATGTTGTAGATTTTAGAT
TTAATCGTTAGGTCAAGTTTCTTTCCGCGTTCTTTCTAAAGTATTTTAGT
TATAAACCACGAGCTTTTACAATGGCTTTTTCTACAAGGTAAATCTTGTG
AGAAATGAAAAACAAATATTAACTTTCAAGAAAAATAAATATAAAAATTC
TTCAATCGTCTTTCAAAAACATAAAATACAACGAGTGGAAGTTTCTTAAA
GCGTGAAAAATTAGATTTGTGTTGAGGCTAAGAGATTTAGAGGGGCCCTT
TAGATAACAATCGTTCAGGACACACTGGTTGGAAATAACTACACGTTTCT
ATAAGATTAATTTCATAAAAGCATGATGCTCAATTTTAGCCAAAATCTCA
GAATATATTACGAACAAATGCTAACCTTAGAGTCTAGAAATGGCTAAGAA
AATTTTGAGTCCATTTTAAGTCAATAAGTTAATAAAAGTGTATAAACAGT
TAGCATACTAAGATTAAAATTAAGAGTATTTTAAGAACACTCAAGCCTGA
TTGATAATCACAAAAAAATAAGAACGCTAGACTGGGACGCCAGTCAGGCT
TGCACGATATCACATAGATAAATTGAGCGTATTGGTAAGCGATAAGGAGG
AAAATCAGTCGGCAGGAGGAGCTAAAAATGTTCATCAGCAACCTCTCACT
AGCTTTTGCTCTCGCTCTCCTGCGCAGCTTCTATTTTAGCAAACACCCAC
TGCCTTCATGTTTCCGCCGATTAGATAACAGACTAGTTAGTTAGTCTATA
AGAACAAATGAACTATTAGTTCTTATAAATTGACATCTATGTTTTTTTTC
ATTTAACAGGCATGGTTTACTAAGATGAAGCAACAACACCAACAATGTCA
TCAACTTCAATAACATTAGATACTTCATCACACCAACTCAATCGCTCATT
GGTCGATATCATTTGTGATCCACCAAACTTCCAACCACCAAACCTCAACA
ACCAGAACACGCCAACGTCAAGACAACAAAGTCCTCAACATTGTTTACGT
GATATCAATCTCACATGCGAGCTCTGCCAAAAATATTTCTATAAACCACG
CATCTTATCCTGTCTGCATACCTTTTGTGAAGAGNTACATGTGAGCTCTG
CCAAAAATATTTCTACAAACCACGCATCTTATCCTGTCTGCATACCTTCT
GTGAAGAGTGCTTATCAAACAACATCACCTATGTTAAGATACCAGGCTAT
GAGGGAACACAGGCCATCATTAAATGCTTAATTTGTGGTGAATTTACAAG
CTTTCCAGAGAAGAATCTAACCTCAATGTTACCATACAATTTCTTTGCAA
ATAATGCTATAGACTATCTCATGATACAAAGTCAAAATGAAAAAGCAATC
CAATGTACAGCATGCTCTGATAAAACAGATGCTATCTCCAGATGTGTTGA
ATGTTCTGAATTTCTATGTTTGTGTTGTGTGACAGCTCACAGGAGAATCA
GAGTAACGAAAGATCACAAAATCATCCCGTTGGATACTTTGAGATACGAC
CAAAGCATGGTTCATAGGCCAGTCTATTGCCCAACACACTCACCAGAGGT
TTTTACCTATTTTTGTGAAGTTTGTAAAGAACTGGTTTGTAAGGATTGTA
CCATTTTAGAACATCGTGGACATAAATATGAAAGTAAGTAGCCGGTTTGG
TTTGCTTTAATAATATATTTCATTACACTTTAAGAGGGAAATTCTGGAAA
ATGGGCCAATTCGACAATATTTCTCTTTCCTTTAAGATTAGGCCTTGGCA
AAAAAATCTATTTATGTTCCTTTTTTACATGCCTATCTTAGACTGGTAGA
TCTGCAAGACGTATGCGTAAATAATTTCAGAATGTTATAAACCATTTCTT
GAATTCAGGATTGAGTGAGGCATTGGAGAATCAAAAACCATCAGTCATGA
AACTATTGGCAACCAACGAGAAAGAAAAAATCCCGCCCATAGCGCGCGCA
CTTGATGATGTCCAAGATATGGCCGCCAGATTACACGCGCGGACGATTGC
AACAAAACAAGCGGTCCGCTCGTGTACTGAACGTTGTATAAGAGAGATCG
AAGAACGTTGTAAGATTTTGCTTTCAAATATTGATAATTTGTATCGAGAG
AAGAGCGACGTGTTACATAAACAACAGGAGGTATTACAAGGTAAGATAAA
GTTGACAATTTAGCCTTTTAAATAGAATTACATGGCAACTAAACTTGTGC
CTAGTTCTCGATTTTTTCAAAACAGATTTTTTCAGAGAGGTTGATTTTTA
GTGTTAAAGAATAATTGGAGGTCTCAAAGAAGATAATCATGTTCGTAATC
ATTTCAAGGCGAGACCCGAGGTGGTTCGTTACTTTAAAAGCCTATTTGTA
TCTGTCACGGGAAGTTTTAATCTTTTTCCGTTCTTTTAATAACTTTGAAA
AAGTAATTTCTTTGTTTGGAGACAAGTCTGAGGATGTACATGATAAATTA
TTTCTCTTAATTTTTTTTTGCAGAAAAACTGATGAAAAACAAGGCAGCGA
ATCAATTTGTGAACTATGCATTCCAACACGGAAGCGAGGCGGAAATATTT
GAATTGCTAGACCTGATGAAAACTAGACTGACCGATCTCAATGATGAGGA
CTTAGGCTATGATGAGCCTGAAGAAAATGACGTCATTGATCACCAGTTTG
ATTCCAAAGCTGTCGAACACATAGCTGAAAACCTCGGTAAAATTGCCACA
TCTAGTGTTTTCTTATCATACACAAAACTCTATGGACCAGGTGTGCGAAC
AGCCAAAGCAGAGATCGAAACATTTTTTATGATAGAAGTTTTTGATCGAA
AGAAGGAGCGCTGTTGTGATCATTTCTCACCGGGCGCCATTAAAGTTAAA
ATTCACGCACCAGAAGGGTTCTTAATCAACAACAAGATCACTGATAATCG
TGATGGTACTTTTACTGTTCGGTATACTCCTGTCACGAAAGGTCGATATG
ATGTTACCGTCAAAATCAGGGGCAAATCATTTCCAAAGAATCAGTTCTCT
GTCAGAGTATTCGAAGGCATTGATTATCTCAAGGTAAGCTTTTGTATATA
ATTCTAATATTAGAGAATCACGTTATATCTAGCGAACGCTACCGCGGAAC
AATCTTAAGGAACTGCTCACTAATGAAAAGCTTTTTTTTGCTATTTAGGT
TGTAGATTAAAATATACAAACATAGATGAAAGTTATAATTAAAGATCTAG
TCAAAAACCTTGAAGTTTTGGGAAATGCTGCGAGCTTGAAAAACCACTAT
ATACTTATTAATTAAGATTTGAAGTGGGGTTTCAAGCTTACAGCATTACC
GAAAAATTGAATACACTCTTCTCGAGATGCATAAATTTATTGATGTCCTC
GTTTTCAAACAGATTTCATTGCTATAAAATTACATATTCACAATGATAAT
TGTGTTGTTTACACCTCATGAGACATTTTGAATTTCAAGTACTTTTGTTT
TATAGTTAATGTTTGCCTTTTGGGAATTTAAATTGGTTTAAATGTATAAT
CTCATAGCAATGAAATCTGTTTGAAAACGAGGACAGCAATAAATTTATGC
ATCTCGAGAAGAGTGTATTGGCTTAAGTGGCTTAATTATTCAGAGCTATT
GAAGAATATCTCACACTCGGAGTTTCATGACTCTGTGCCAATCTCCGGTG
AAAATGAGCTCAAATCAACATATAACTATGAGAAAATTAATCAATTGAAC
TAAATTAGAGTTTCCTACTTTCAGATCGGCAGCAATTTTTTATGTTTCGG
TGAGCGTGGCGTCAAAAACGGTGAATTTAAACAACCCTATGGAATTGCAA
CAAATTCACAAGGTCAAATCTACGTGACCGACAAAACTAACAATCGAGTA
CAAATCTTCGATAAATTCGGCACCTTTCTATCAGAGTTCGGATCACGTGG
TACAAAACAAGGTCAATTTTCAGGACCGGAAGGAATAGCAGTTGATCAAG
CAGGCATGATCTTCGTAGCTGATACAGAAAATCATCGAATACAAGCTTTC
AATGCAAATGGAACATATCATTCAAAGTTTGGTACAAAAGGTATAAGATA
TATTAGTATCATGTTTCATTGATATTTAGTTTTTAGTTCCCTTCATAAAT
GAGGCTGTCTTTCTTCCTACAATATTTGATTTTTAAACCTGATTTCCGAG
CAGATTATGATTACTTCGCACTGGCACGTTTGCACGATAAAGGACATGGC
TCTCGAAAAAGAATCTGCCCAGGTTGGAGCACAGCTTTGATATTTTTCAT
CAAGATTTGGATTGAATATCAAATGTGCTTTTGAGGGCGGTGATTTTCTA
AAGGAAAATACATGCACCAAAATCAAACATCAATCATTAGAACCTAGTCG
CTTTCGTATTCGTTTCAAAGCAAAATACAGCGCAGTTTTGATTATTTTGG
CTGAACAACCAGATCAGAACGTCAAATTTGCCATATCCCTTTATAACACA
GCGCGGTATGCAGAGAATAAATGATCTGTTAATAAATCTTTAAACACGCA
ATTTCACAAGTTACTCTCGTAATGTTTCAACAAAGGAAAAAATATACCTT
TTTAAAATTTCATTCCATTAGGTAGTGAAGAAGGAGAGCTTCTCAGTCCA
TGCGGTATTGCTATTGATAAGATCGGTAACATATGTGTGGCTGATCGAGG
CAACCATCGAGTCCAAGTATTCACACCAGAGGGTAAAAGTTTATTATCAT
TTGGTTCCTATGGTGACCAATACGGACAATTAAATTCACCGAGTTTTCTC
GCCATTAACAATGATAATTGGTTCATTGTTGCCGACAATGGGAACAATAG
AATCGTTTGTTATGATAGCAATGGGTTGTATGCTCAAGAGACTGGTGCCA
AGGGTTCGGACCCAGGCGAGTTTTCTAAACCAAATGGTATTGTGGTCGAT
CAAGAAGGTTTTATCATAGTCTCTGATACAGGAAATAACAGGGTGCAGGT
GTTAACGCCAGATTTGAAATATTTCAGTCAATTTGGTTGCCATGGTAATA
ATGATGTTGAATTTAAACAGTTAACTGATGTAGCTTTAACTCAAGATGGT
AGAGTTGCAGTGAGCGATACAAACAATTACAGGGTACAAGTGTTCTAGTA
TTATTCATTAATTTTAAAAAAAATTAATATTGGTATATTTTATGCGTATG
GCTTTTGTATACTATTGAATATAAAAACAATTAAAAATAACTGAAATAAA
GGATTCTTTGTAAATATCTAATAAAGTTATTAGTATCTTAAAAAATTTCG
TATTTGCAATCTATAAACATTTTTTATAAGCAACCGAATTGCTAAGGCTC
CAGCTCTGAAAGTAGCCACAAAATTAAGCAACTTGGTTTATTAATCTTAG
TCCTGAAACGAATATGAACAAAGAAGTCATCAAAAATGAAAATTGACATC
GAAATACCTAACAGAGGTGTTATAATATTACTTTATTTGAGGAGTTTCAG
GCATAATATGAGGTGAAAAGTGAAATTTTTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007492XLOC_007492Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013410-exon-sc0000167-1575043694:88149..88187TCONS_00013410-exon-sc0000167-1575043694:88149..88187Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1575043694:86255..87078TCONS_00013410-exon-sc0000167-1575043694:86255..87078Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1575043694:85748..86029TCONS_00013410-exon-sc0000167-1575043694:85748..86029Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1575043694:84855..85414TCONS_00013410-exon-sc0000167-1575043694:84855..85414Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1575043694:83848..84163TCONS_00013410-exon-sc0000167-1575043694:83848..84163Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1575043694:82405..83316TCONS_00013410-exon-sc0000167-1575043694:82405..83316Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1510915933:88149..88187TCONS_00013410-exon-sc0000167-1510915933:88149..88187Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1510915933:86255..87078TCONS_00013410-exon-sc0000167-1510915933:86255..87078Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1510915933:85748..86029TCONS_00013410-exon-sc0000167-1510915933:85748..86029Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1510915933:84855..85414TCONS_00013410-exon-sc0000167-1510915933:84855..85414Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1510915933:83848..84163TCONS_00013410-exon-sc0000167-1510915933:83848..84163Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1510915933:82405..83316TCONS_00013410-exon-sc0000167-1510915933:82405..83316Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1491911889:88149..88187TCONS_00013410-exon-sc0000167-1491911889:88149..88187Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1491911889:86255..87078TCONS_00013410-exon-sc0000167-1491911889:86255..87078Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1491911889:85748..86029TCONS_00013410-exon-sc0000167-1491911889:85748..86029Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1491911889:84855..85414TCONS_00013410-exon-sc0000167-1491911889:84855..85414Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1491911889:83848..84163TCONS_00013410-exon-sc0000167-1491911889:83848..84163Clytia hemisphaericaexon
TCONS_00013410-exon-sc0000167-1491911889:82405..83316TCONS_00013410-exon-sc0000167-1491911889:82405..83316Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:82405..88187 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0911689	0.0317835	0.0922593	0.0541568	2.43857	0.751597	2.53287	0.907173	0.308264	0.00399017	3.62957	3.37241	6.01291	3.68161	5.89808	14.1964	6.79264	6.19878	1.08974	1.61515	3.51385	2.03292	4.20807	2.64492	1.17769	2.07169	0.602504	1.21626	0.0433673	0.0552864
Blast
[Close]
BLAST of TCONS_00013410 vs. Swiss-Prot (Human)
Match: LIN41 (E3 ubiquitin-protein ligase TRIM71 OS=Homo sapiens GN=TRIM71 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.506e-99
Identity = 204/676 (30.18%), Postives = 350/676 (51.78%), Query Frame = 2 
Query:  584 CTACSDKTDAISRCVECSEFLCLCCVTAHRRIRVTKDHKI-----------------IPLDTLRYDQSMV----HRPVYCPTHSPEVFTYFCEVCKELVCKDCTILEHRGHKYERLSEALENQKPSVMKLLATNEKEKIPPIARALDDVQDMAARLHARTIATKQAVRSXXXXXXXXXXXXXXXLLSNIDNLYREKSDVLHKQQEVLQEKLMKNKAANQFVNYAFQHGSEAEIFELLDLMKTRLTDLNDEDLGYDEPEENDVIDHQFDSKAVEHIAENLGKIATSSVFLSYTKLYGPGVRTAKAEIETFFMIEVFDRKKERCCDHFSPG-AIKVKIHAPEGFLINNKITDNRDGTFTVRYTPVTKGRYDVTVKIRGKSFPKNQFSVRVFEGIDYLKIGSNFLCFGERGVKNGEFKQPYGIATNSQGQIYVTDKTNNRVQIFDKFGTFLSEFGSRGTKQGQFSGPEGIAVDQAGMIFVADTENHRIQAFNANGTYHSKFGTKGSEEGELLSPCGIAIDKIGNICVADRGNHRVQVFTPEGKSLLSFGSYGDQYGQLNSPSFLAINNDNWFIVADNGNNRIVCYDSNGLYAQETGAKGSDPGEFSKPNGIVVDQEGFIIVSDTGNNRVQVLTPDLKYFSQFGCHGNNDVEFKQLTDVALTQDGRVAVSDTNNYRVQVF 2545
            C++C +   A SRC++C E LC  CV AH+R+R+TKDH I                 +         S++     R  +C  H  EV   +C+ C   +C++CT+  H GH +  L EAL++ +   ++LLA  ++ +   I  +++  Q +A ++  +    +  V++ T R  + +EER   LL  ++ + + K+  L+ Q E L++ L K ++    V    + G   +I    D M  ++ +L        +P+E+D +      +A+    ++ G   +S  F   TK  G G++ A       F +  +D   E      S G  +   +  P+G L   +++D ++GT+ V Y P  +G + V+V +  +    + F V V  G  Y+ IG   L FG  G  +G+  +P+G++ + +G I V D++NNR+Q+F   G F  +FG+ G++ GQF  P G+A D +  I VAD +NHRIQ F   G +  KFG KG++ G+   P  +A++  G I V+D  NHR+Q+F P+G  L  +G  G  +   +SP  +A N++   +V D  N+R++    +   A+  G++G+  G+F +P G+ VDQEG IIV+D+ N+RVQ+   +  +  +FG  G+   +  + + +A+T DG + V D  N R+ VF
Sbjct:  199 CSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPGAAAAAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRECTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGR-QAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQVLEEGRALDILLARDRMLAQVQELKTVR-SLLQPQEDDRVMFTPPDQALYLAIKSFG-FVSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGE---PRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF 868
The following BLAST results are available for this feature:
BLAST of TCONS_00013410 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LIN411.506e-9930.18E3 ubiquitin-protein ligase TRIM71 OS=Homo sapiens... [more]
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