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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013522 ID=TCONS_00013522|Name=TCONS_00013522|organism=Clytia hemisphaerica|type=transcript|length=1575bp
AATAAACATGCGGTAAGCTTCTTGTGTAGAACAGGCTTTAAGTAAAATTT
AGAATCTAGATGGGGTTTTATGAAAGATATGGGATCGAAGTTTACTAGCT
CTCAGACCTCCATTGACATCCTCGCACATTATCAAAATCGCCGCCATTTT
TTACAGACTTCAAGGCTTCCAGCATCAAACACGTTTTTCCTCTAGCAAGG
AAAGAAATTCAACAGATAATGTCTGACCAAGAAATCAAGACAGAAGAAGC
TGCACCAGCTGAAGAAGCACCTCAAGCAGAAGAAAAAGCTGTTGATGAGG
TCAAAACAGAAGAAGCAGTAGAAGAAGAAGTTAAAGAGGAAGAATCAGAA
GATGAAGTCGAATATGAATGTCCTGAAGAGTTTAACACACGTGAAGAAAT
GTGTAAGATGTTTGTCGGAGGTCTAGATAAAACCACGACTGATGAGGAAT
TCAAAGAACTATTTGCTGAACATGGAGAAATCAAAGATTTCATAATAATT
CGAaaagaaaatagtaaaagtGACAGACTATTTGGATTTATTACATTTGC
ACAATGTGATGATCTCGAAAGATGTTTGTTGAAGCGTCCACATAATTATA
AAAGCAAAGAATTAGATGTTAAACGTGCTGTCCCAAAATCATCTGGAAAC
GACGAACAAGGACATTATAAAGTGAAAAAACTTCATGTTGCCAACCTTCC
ACCAGATTTCAAGGTTAAAACCCTTAGGAGGTATTTAAAAGCACGACACT
CAGAAGAGTTTGGAAAGATAGAAGATATCAACTTTTTGACTAAGGAAGAA
GGTGGCAAAACAGTTAACAAGGGCTTTGGTTTCATCAATGTCTCAACTGA
AGATTTTGCTGATAGAATTGCAATTGGTGAAAACAAATTCACTTTGGACA
ACAATGCATTGAGAATCTCCAAAGCTAAACCAAGAAGTCAAGGAGGCTTT
AGAGGTGGTCGTGGAGGCGGCAACTTTAACAACTATGGAAATTACGGTGG
TGGTTATAATCAAAATCAATATAACCAATATGATGGAGGTTTCGGATATG
GGGGTGGATACGGCTACGGAGGCTACGGCGGATACGGTGGTGCTTATGGA
GGCTACGGTGGTTATGCATATCAAGGTGGACGTGGTGGTGGAAACAGCCG
TTACAAGCCTTATTAATGAATCCAGAAAGTCGCTTTAACTCAAACAAGCT
AGTAAGCTTTTGAATGCGTCCTAAAATCAAGTCGTAAATATGGTGTCGTT
CTGAGTGTCCCTATATCTCGCTCANCTTTTGAATGCGTCCTAAAATCAAG
TCGTAAATATGGTGTCATTCTGAGAATCCCTATATCTCGCTCAGTCATTC
ATTACTATCAAGTCGAAATGCGTCTACTATCCTTACATTGAGTGAACATC
GTCAGTCTATACTTTTCCTTTCACACACTTGAAggagtaaaaaaattaat
tttttattattttaatgatttttatgaaaactacgatgaaatattttatt
ttggttttaatttttgtacTTTCCTATTTTCTGTGATATTACATTCAAAA
AGACATCATTCTTGGCATCAAACAT Run BLAST on NCBI transcript from alignment at sc0000168:476885..492593- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013522 ID=TCONS_00013522|Name=TCONS_00013522|organism=Clytia hemisphaerica|type=transcript|length=15709bp|location=Sequence derived from alignment at sc0000168:476885..492593- (Clytia hemisphaerica)
AATAAACATGCGGTAAGCTTCTTGTGTAGAACAGGCTTTAAGTAAAATTT
AGAATCTAGATGGGGTTTTATGAAAGATATGGGATCGAAGTTTACTAGCT
CTCAGACCTCCATTGACATCCTCGCACATTATCAAAATCGCCGCCATTTT
TTACAGACTTCAAGGCTTCCAGCATCAAACACGTTTTTCCTCTAGCAAGG
AAAGAAATTCAACAGGTATACCTCTCTTTATCCTTGTTTTAGTTTTACGT
ATTCATTTACCTTTGAAAAAAGGGCGATCCGAAAGCAGCACCACTTATTT
GAAAAGCTGTTCCGTTGGGAATGGGTGACCTGTACTGTTCCTGAATGATA
TTTTCTCCCATGTCAATAAAGAACTGTTCCCTCAAATGGAAATCTAACAA
GCTAAGACTGTAAGAGATTTTCATTTTTGCTGAAAAATCTGATGTGTTCT
TCAAGGGCTATGTATGAAAGATTACAGCAGTTAGAATTGCCAGCTATATA
CAAAAGGAAATCTTGATCTTTAGAGCTGTTCTGAAGTGTGGAATGCTTAC
TAGAAAGACCTTTTCAGGATAACCCTGAGTCCATAACAAATACCGTGAGA
TTGGGTAACTTGCATCACAGTGGAGGCTAACATGCATATCACGTGCGTTT
GGTTTGGGAACGCGAAACACGAACGAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGTTT
GGATTTCTAGAAAGCTTACCCATTCATTGTTAATACATTTTTTATTTGAA
AGTAATCTCTTCATGGAATAAAAAGATATAGTCAAATCTTGTAGGGTTAT
TTTTCAAAATTTTTTTGCCAAATTCGATTTTCGCATTTCGCCATTTTACC
CTACGCAAACGCACGTGATATATAGTCGCGCGGCTGAGGTCGAAAAACGT
TTCATTTCGTGATACATCTTTTAGATTCCAAAAAAAACAACTGAAACTCG
CGAATTAGTATGTGTAGATTACAAAATCAAAAAGTTTCCACGATATTATC
GTGCAAGTAACGAGTAAATGGCGATTTTTTGCGTTTCCAGGCAAAATTGC
AAGGCCTGGAAATTCATGATTTTTTGGGGGTCTTCAAATTAAAAAAATAC
CTATATCACATGATAGAGCTCTTCAAACTGAGCAAAAAAGTGTATTACAC
CAAAGTCCCAACTTCTCTAGATCAAAATTTATTGGCCTATTTGTGGTAAA
AAACTGATGGAAAACAGGGAATTTCCCCACAATCTGCATCAATTTATGCA
AAATTAAACACCTTTTCAGAATTTTCTTCACGCGGGAGAAATCGTTGACA
TGCGGGAGTCTCCCGCTCAGACATGGGGGAGTCTCCCGCTCAATGCGGGA
GAGTTGACAGCTATGCAGTAGCTACAAAGTTTGCGAGCAAACTTTAAACA
GATGTTTTCAATAGATACGACCTTTCTGAACACAAAATCATCAACCGGAC
AGTTTGAAAATAATTACCGGACGCGTCCGAAAATATTTTCGTATTTGATG
ACGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAAGGCCCCTTATTTTGC
TCTTAATAGCCTGATTTTAGCCTATATTTACCTTATTTTTGGGGTTTCAG
AAGTACAATTTCCAACCCCCCCGGCAATTAGGTACCTGAGGTACCCCCCG
TTTATTAAAATTTCGAAAATTTTCCAACCCCCCGTTTATTCGAACCACCC
CGTTTATTTGGCACCTAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACTGGCCCATAGCTGGTGGGGTGGTGTATTTTTTAGGTTAAATTG
AGTTAGTACAGTGTACTAAAAGGGTGGTCCTCTGAGAAAAATACAATGAA
AAAGCTAGTACAGTGTACTAAAAGGGTGGTCCTCTGAGAAAAATACAATG
AAAAAGCTAGTACACTGTACTAAAAAGGGTGGTGTTCTGAATTGATACAC
ACTGAGAAATTAGTACATTGTACTAATTTCAGTGGTAAAAACACACAAAC
CCAGTGAATTCCCATGTATATTTGCCCTAATTTGCCAGGTCCAAGCTGGT
CCAAGACCTTCAAGTCAAGGTTGGTTAAGCTATACAAATTGGTACACTGA
TTTTCTCCCAATGTTTCCTGTTTACTTGATTGGATTTGTTTCAGAGTCGC
AGCATGCGCAAGTGGAGACCGGCCTTAAGTACAATCTTGATTATGTTTTC
TTTAATCTATCTACATTGTGGCAACAACAAGAATTTGAATGTGTAAACGT
TCGAATCGAAGCTTTCAAGTTTTATGAAAACAAATCCGCTCTATTGTTTT
ATGTTTTTTAGTAACCTTGTTGGATTGTTAATTGAAAAAAATCTGTATAT
AAGTGAAATCACCGGGGGGAGGGGGTGAAAACGACCGTGCGTTCGGCCAA
AAATCAGGTCTCTAAAATCGGTCCCTTACAGTGCAGGCAAAATTTGGCTG
TAAATTGACCCTTATAGTGTAATTTTTCGAAATTTTTTGCCCTTTTCAGG
GCAAAGTTTTTTGAAATTTCTCAAATTTTTACCTCAAAATTTGGTATTTT
ATAAAATTTTACCCCCTTACAGTGCACTTTTTCCCACTTGCTCACAAATC
AACCCTTACAGTGCACTTTCCAAAGTCCAAAAAACCTACCCTTAAGGGCC
GCACGTCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGCCCTTTCCCGGGGGGCCCCCCCCCCCCCCGGGAAAAGCA
CCTTTTTATATATTTTGTATAATATTACATTTGATAAAAGATTTTCCATT
TCAGTTTGTGTACAATGGGCTCTTCCAGAAAAAAATTGCACATGGGGTGT
GGAGGATATAACAATTTTTAGTGATTTACCCCCCGAACAGGGTGACTTTT
GGCCCCCCGGACAATAGGTTTTACCCCCGGACAATAGGTTTTACCCCCAG
ACAAGCATCTGCTGACCCCCCGGACACCCCAAATTACCCCCAGACAGAGC
AAATTTACCCCCTGGACAAGGCAAATTTTGATGATTTTTTGCTACCCCCC
GGACAAAATATCCTCCACCCCCCATGTACGAATGTTTTCTGGAAGAGCCC
AATGCTAATAAGTCTTTTATTTTTATTTTTCGAAAAAGAAAAACTGCTAC
AGCTTGCCAGACAACCAGAAATCAAGTCGCAAGAAGGGAAATAACTCAAA
GTTGGTTTTGAGTGTTTTGACATGCTAATTTCAGCTAATTTGACTGTATT
TGATTGACTTTGCTTTGTCTGTTTCATTGTTTCAGTGTTTGTACTACTGT
ATATAAGGATTCAAGTATTTTAATATTCAAATCTTTCCTTTTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGGCT
AAGAAGAAATTAGAACAGTGCACTATAAGGGGTGGTTTCTAAACTTATCT
GATCGAAAAAACAGCTAATACAGTGTACTAAAAGGGTGGTATAAAAAATC
CGGTCATGGAGAAAAGGTGGTAATAAAAATCTAGTTGTGGAAAAATGTCA
GTACAGTGTACTAAAAGGGTGGTATCAAAGCTCCGGCTGTGGAATAAAGT
TAGTACAGTGTACTAAAAGGGTGGTGTCAAAGCCCCAACCGTGAAAAAAG
GTTAGTACAGTGTACTAAAAGGGTGGTGTCAAAGCCCCGACCGTGAAAAA
AAGTTAGTACAGTGTACTAAAAAGGGTGGTGGTCTAATTTTTTGGAAAAA
AATCCAAAAATCAAGTTAGTACCCTATGGTCCAGTACACTGAATTGGTAC
CCCCCCTGGTTACGGCCATAAAGGAAAAGCGTTCTAACTTTTTATAGCAA
AATTTTCAGATATGGTTACTGACCATTTTCTTAATCTACGTTAAAAAAGG
CTTCAATCGGTATATAATATGTCTATGTTGGTTCTCAAAATTTTTTCAGT
TAGCCTATGGGCACGCATGACGTCATCAGGTACTAAAACCGGTAAGTAAT
TTCAACAACCCCGGTTGATGGTTTCTAGATATTTAGGTTGTATATTTTCA
ATTAAAAGTGGTTTGGGATTGTTCGCACTCCGTCCAATTTTTTTGTGACC
TCAGCTGCCTGTCTAATAGCCCTCAAATGAAAGACCTGGCTGGTCATTAA
AATACAACTACGCAGCTCTGCTCGCAGCTCTACTCTACCATTTTTGTTTT
GATTTAATTTTGTATTTAAATGACCAGCCAGGTCTTTCATTTGAGGGCTA
TGCATGTTAGCCTCCACTGATGCAAGTTACCCAATTTTACGGTAGTTTGT
GGCTTCTTCACAACTGTGAAAGACACATCTGGACTTATTTTATACTTTTC
CGTCTTACCTATTTTATCTTTTCCTTTAGGCAGCAATCACAAATATCTTC
GTTTCGCGTCGCTTGACCGACTCTCGAAAATTGAGTAGAATTGAGTCTGT
GATAGGGTGCGCACTCGTCAAGATTTTTTGCGAGGAACGAGGAAGAATTT
ACAAAAATGAACTTCAATGCATTAGTACTTACCTTTAAATCAACCAAATC
ATTCTTTTTTTTAAATCAATCAGGAATTATCAGGGAAACAAGTAAAAAAA
ACTGCATCCAGGTATCTATTTTCGTTCCAAAGATATTCATGTTCGACGTT
AAGTTGAAAACGCGATTTAGTGCTGACCACGGCACCGGAAAATTCTCGAC
CCACATGGAAAACACATGGCTGTCGCTATTGAGCTGGTTCATCTTTTCAA
TTGCGGTTTTTTTAGTAAACCCAGGGTAAGATTAGGCTACAATCTATCAC
AAAGTGCTTTATTTGAAAATCTACAGGCCGTCTGGAATTTCGAAAAATGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTAGCTATCATTTCCAGCTCATTA
GCGATAAGCTAAAGTTTAACAGTCATCGGGCCGATTTTCAGACCGCACCG
GCAAAACTCCCCACACCCCGCCACACAAAGACTAGATTTCATCCGCCATT
TTTGGCGCGATTTTGGTGCTTCCGGAAATTATTTCTTGCTGGCGTGGTGT
AAGGAGGCAATTCTTTAAAAAGGTGATTTTTTTGTGTTTTGAAAATGGAA
TAACTTTGAGAATACTTAAACCAATTCTAATATAAATGACCCCTCATTTT
TCTCACAAAGGTAAGGACTTTCAAATAAAATTAGTTTGGTTTCTTAAATT
GAAGGGAAAATTTTGCTTTGGTGAGTCTGTAAATTTGTCTTGACTTTTTA
TGTCAATGACCTTTCCTTTGTTCAAAAATTTTATTATTGCCAATTTTTTG
CGAGCAATTTCTAGGGCATTTGCAGCATTTTGACTTTGTTTATCATTACA
TGTGCCATTTTGGGGTCGAGAGGTCACAGTGTTCAAAGGTCATAATTTTA
AACCACCTATTACACGCGGTTGTTTTGGCTGCTGGCTGGCTGGAAGTTTC
CTCCAAGAATGCACACCAAAAATGGATGGAAAAATGGAAACCCAAAAATT
TTTTACGAATTACGTAAGGCGGCAATCACAAATATCTTCATTTCGCGTCC
TCGTTGGGTCTAAAACGTGAGTCGGTCGGTGGTAAAAGTTTTCGGGTTTT
CATCCATCCATCATCCATTTTTGGAGTGTATTCTTGAAGGAAACTGTCAG
CCAGCCAGCAGCCAAAACAACCGCGTGTTATGGGTGGTTTCAAATTATGA
CCTTTATGCACTGTGGACCCCCAACCCCGCGAAACGAATATATTTGTGAT
TGCCGCCTAATGGAAATGGGGGTTGCACAAACCCCTGTAACAATGGGGGA
GCACCCCGTTGCTAAGATGTTGGCTTTAGTCCGGCGGCGATCCAGGATCA
CCCTTACAATTAGTAAATATGGGTTTTTATTTTATTTTCCCATTATATGG
TCCCTTGGGACCCCAAAACCAGTTTTTGCCAAGCTGGCAAAGCTGGGGAA
AATTTTTTATGGGGGCTTGAAGGGGGTAGGGTCATTTTAGCCTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATTTTGGTATCGATACCAACTCGACTTTTTGAAATTTGAAAAA
AAAAATTGACACCACCCCCCGGCCCTGGGTTTGGTATCTGGATCCTGACC
CCCCCCTGCTATATGATGGCACAATCAGTTTTAGCTAAATGAGAACTTCA
AAAATCGACTTAAGGACCCCCAGGCTAAAATGACCCTACCGACTTCAAGC
CCCCATAAAAAATTTTCCCCAGCTTTGCCAGCTTGGCAAAAACTGGTTTT
GGGGTCCCAAGGGACCATATAATGAGAAAATAAAATAAAAACCCATATTT
ACTACTTGTAAGGGTTGATGCAAAAAAGCCCTTTTCGCTGAAACCACTGA
AAACAAAAGTAAAATCTGCCCGTTCTTGAAATCCCTTAATCTTGATATAC
GAGTTTATACTGTTTGTTTATAGTTTTTTTCTGATTTTTAGGACTTATAT
TTTCTGTTTCGAACAGTTCAGTGATCAAAATAAGCTTTTTCATTGTGGTT
GGTTATTTTAGAGAATCACTCATGTGTCACCCGAAAGGCTAAGGGACAGG
AGGAAATTATGAAAATTTGCCCCTCGTTATTGGCTTAAAGTTATCTCATT
TTTAATGACGTTAATCATTGATGAACCTTTTGAATGAAAGAAATTTAAGC
TAGATGGCAATGCAGAGTAAATTACTTTTTCTTTAGGATGTTTTGAAAAA
AAGTACAAATCTTAAATTATGTAATGTATGTAAGTTTTCTCAAAGCGTAT
TATTCAGTGCTGCAAATAAGGAATTTCAAGTTGGCCGGTGATTACTCAAT
CAGAAAGCACTAACAATGAAACCATCAAAATTTCACGAGAAAAAACACAC
ATATTAGCTTAAAAATGACCGGTAATTACCGGTCACCGGCCGTTATTTGC
AGCACTGTTATTTGCAGTTTCTTCAAGATTTGAAGTTTGAAAAGAGCAAT
TTTATTTTTATTTTTTTCCATCCTCTGGTTCAAAAGATCATCTTCAAATG
TCCGTAAATCAGAAAAATAAAAAATTACTGTACTTGCCCAAATAATAAAA
GAATTATTACAGTTTTTCTCTTTAGAAGACTATACGAATGCCCAGAGAGT
ATTTCAAGACACAAAAGGTTTTGCATCAAAAATTATCATCTTTCAAAAGG
AAAAATCACAATTGCTCACTTGAGATACATTTTATCCACAAAAAATCACA
TCAGCTGAAGCCATAATTTTCACTGAACCATCTAGGAAAAAAATATTTGG
AAAATCTTTTGCAAGTTTTTTACACTGGCTGTTTCTAATGACCTCAGTAT
AGTTAGCCACATTAGATATAATTATTAGCCACGATTTTTCACGCTTTGGG
CTGATATATTTAGCCAATAGGTTAACCTAGAAAATTACTTGTTTTTGCTT
CGAAATATTTGATTTATTCCCTTCAACAAGTTTTAATCTTTTTGATAGCC
ACAATTTATCACATTTTTATGGAGCTTTCAAAAAGTGTCATGGAAAATAC
AAAAATGTCCTTTCCTGTGGAAACTAATCTAATTTAGACATGATATAGGA
GTACTGAGAGCTACAATGTTCTTTGTGTGCACAGACTTTAACTTTTTTTA
AATGATCAATTAGACCTAATTAAACAGAACAAAAAATTTTACTACAAAAA
ACCTTGAATTTTACTTGATAGGAAATTATGACTTAATTATGCCTTGACTC
AATTTTTTCGAGCCTGTGGGCATCCCCAAATCTTTTGCAGGCAAACTTAA
TGTATTACAACTTTTCTCAGGATTGAATCATAGGAATCTTGATTTTTGGT
ACAATATCAAACGTGCAAAATGGTGGCTAAAATGTGACGGAGCCCGATTT
TCGAGAAACATTTTTTCTGGCCGAAAATGCCAGAAATCTGCCAGAAAAAC
CGGTTTTTTGACATTTTCTCGAATTTTCATCCTTGTTTTTTTTTTATATT
TTGCACAGGGGGGGGTGAAGCAGTTAGTACAAGACATCATGCCTACTAAC
TGCTTTCTCGGAAGAAGTTAGTAACACCACCACCTTGGTACACTTAGTAC
AGTTAGTACTAACTGAATTTAGCCTTGAAAAAGGCTTTTGACCTTCATAA
ATTCAATAAAATAAAATAAAATAAAATTTAATATCTTAAAAATGATTCAA
TTTTCCATAGCTTTCAATAGGAAAAAACAACATTTTCGAAAATCAAATTT
CTATTCAACCAGCAAATTGTTTTTAAGATTTAAAAAAAAAATTTCGAAAA
TTTGAAAAAAAACCTACTTCCCAAAAAATTTTTTTGTAAAATATGGTCTT
TTTTTTTTAATTTTCTCACAAAATCCTATTTTTTACACAGTTAGTACCAA
AATGNGCATGTTTCAATTTTCAATAAAATTGATATTTGAAGCCGGAACTA
TTTAAAAATCGCTGGAACAACCTATTTTCGCCGGTAAGACAGTATTTCTT
GAATTTCTCGAGCTTCACATTATATTTTTTTATGAAATTTTGCACACTGA
TGCAAAATGACAATACCTAAAATGTGATGGAGCCCGATTTTTGAAAAACA
TTCTTTTTCAGGCCGAAAATGCCGGAAATATGCCGGAAAACCCGTTTTTT
TGACATTTTCTCGAATTTTCATCCTTAGTTTTTTCTGATGTTTTGCAGAA
AGATGCGTATTAGCAATACTTAAATTATGGCCGAGTCCAATTTTCGAGAA
AAATTATTTTCTGGTCTGAAATGCCCGGAAATGTGCCGTTTTTGCTGATT
TCATTGGACTTTTTCCTGATATTTCTTCTTTTTTTTCACGCAAAACCATT
ATATGCCACCATCAAGCATGATTCATATGTTAATAAAACTGATTTTTATA
GCTGGGACTTTCTAAAAATTGCAGGAACAGCTGAGAATTGCCAGAAAAAC
AGTTTTTCATGAATTTTTCAAAANTGAACCACCATTGTAGTTAGTGCAGG
TTCAAAAAATTTATAAATAGGAGGGAAGGGATGTATATACACTATGAGTT
TAAAAGACTTAAAAAATAATCAAGATATTGGTAGATTTGAAATCCTCTTC
TACTTTAATGGGATAAACTTTCAGGACTTAATTTCGCGCGTGGCACTATT
GGGTGGCAATATTTTCACGATTTTGTGACTTTTACTGTCAAATCATGCAT
GTTGGTTGTTGAAATATACATTATTTGCGCTTCTTTGATGCCCTTAAACA
TTCAAATAGTATTTGTTTGACATATTTTGAGTTTTGTTTAGAAATATTTC
ACGGATGAGGCCCTTCCAAATTTCCATTGGGAAATTTCAATTTCCACAAA
ATTTAATCCCTGCAAAAGTTTATCCCATTAAAGTAGGGTATCTGGGATTC
TGTTTTTATCTAAGTTCCCTTATTTTTAATCCATAGATAATGTCTGACCA
AGAAATCAAGACAGAAGAAGCTGCACCAGCTGAAGAAGCACCTCAAGCAG
AAGAAAAAGCTGTTGATGAGGTCAAAACAGAAGAAGCAGTAGAAGAAGAA
GTTAAAGAGGAAGAATCAGAAGATGAAGTCGAATATGAATGTCCTGAAGA
GTTTAACACACGTGAAGAAATGTGTAAGATGTTTGTCGGAGGTCTAGATA
AAACCACGACTGATGAGGAATTCAAAGAACTATTTGCTGAACATGGAGAA
ATCAAAGATTTCATAATAATTCGAAAAGAAAATAGTAAAAGTGACAGACT
ATTTGGATTTATTACATTTGCACAATGTGATGATCTCGAAAGATGTTTGT
TGAAGCGTCCACATAATTATAAAAGCAAAGAATTAGATGTTAAACGTGCT
GTCCCAAAATCATCTGGAAACGACGAACAAGGACATTATAAAGTGAAAAA
ACTTCATGTTGCCAACCTTCCACCAGATTTCAAGGTTAAAACCCTTAGGA
GGTATTTAAAAGCACGACACTCAGAAGAGTTTGGAAAGATNATTTCGCGC
GTGGCACTATTGGGTGGCAATATTTTCACGATTTTGTGACTTTTACTGTC
AAATCATGCATGTTGGTTGTTGAAATATACATTATTTGCGCTTCTTTGAT
GCCCTTAAACATTCAAATAGTATTTGTTTGACATATTTTGAGTTTTGTTT
AGAAATATTTCACGGATGAGGCCCTTCCAAATTTCCATTGGGAAATTTCA
ATTTCCACAAAATTTAATCCCTGCGAAAGTTTATCCCATTAAAGTAGGGT
ATCTGGGATTCTGTTTTTATCTAAGTTCCCTTATTTTTAATCCATAGATA
ATGTCTGACCAAGAAATCAAGACAGAAGAAGCTGCACCAGCTGAAGAAGC
ACCTCAAGCAGAAGAAAAAGCTGTTGATGAGGTCAAAACAGAAGAAGCAG
TAGAAGAAGAAGTTAAAGAGGAAGAATCAGAAGATGAAGTCGAATATGAA
TGTCCTGAAGAGTTTAACACACGTGAAGAAATGTGTAAGATGTTTGTCGG
AGGTCTAGATAAAACCACGACTGATGAGGAATTCAAAGAACTATTTGCTG
AACATGGAGAAATCAAAGATTTCATAATAATTCGAAAAGAAAATAGTAAA
AGTGACAGACTATTTGGATTTATTACATTTGCACAATGTGATGATCTCGA
AAGATGTTTGTTGAAGCGTCCACATAATTATAAAAGCAAAGAATTAGATG
TTAAACGTGCTGTCCCAAAATCATCTGGAAACGACGAACAAGGACATTAT
AAAGTGAAAAAACTTCATGTTGCCAACCTTCCACCAGATTTCAAGGTTAA
AACCCTTAGGAGGTATTTAAAAGCACGACACTCAGAAGAGTTTGGAAAGA
TAGAAGATATCAACTTTTTGACTAAGGAAGAAGGTGGCAAAACAGTTAAC
AAGGGCTTTGGTTTCATCAATGTCTCAACTGAAGATTTTGCTGATAGAAT
TGCAATTGGTGAAAACAAATTCACTTTGGACAACAATGCATTGAGAATCT
CCAAAGCTAAACCAAGAAGTCAAGGAGGCTGTAAGTATTAAGTTTTGGAT
ACTTTAGAAGAATTTCTTCAAAAGACATGCGTCAGGGAAATATTACCTTC
AAATGCAACAAGAAGAAAATCAGAATCTCTGTATACCTTAAATATATGTA
ATCGTCAGCCGTGCAAAATTACTCGAATCTGATTGGTTTAGAGGAGTGCG
ATTAATCGTTAATTGCACTATTACCACTTTTTGCACTCTTCGGCGGNNNN
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GAAATTCTGTTTGGAACCTAATTCTAGAATAATATCCATCATTTGACTCC
TGTCTTTCAAATTTCAGTTAGAGGTGGTCGTGGAGGCGGCAACTTTAACA
ACTATGGAAATTACGGTGGTGGTTATAATCAAAATCAATATAACCAATAT
GATGGAGGTTTCGGATATGGGGGTGGATACGGCTACGGAGGCTACGGCGG
ATACGGTGGTGCTTATGGAGGCTACGGTGGTTATGCATATCAAGGTGGAC
GTGGTGGTGGAAACAGCCGTTACAAGCCTTATTAATGTAAGTTTACTTTT
ATTCAACCTATATTTGCAGCAAAGTCGACAAAATCAAATGGGTTTTTGAA
CTTTACCTCGAGTTTAAGGCAGCACTTTTTGTATGGTTTTTGAGCGTTCG
CTTTCTCGTGTTATAAAACTTTTGTTCTCGTTGTGCTCATTTGTAGATTG
TTATTCATTCTTGTCTAACATTGTATTTTCTATTGCAGCAACAGGTAAGT
ATACAAGTGAAAGAACAGTACTAAACCTCATTTCTTGATTTTCACATCCA
GGAATCCAGAAAGTCGCTTTAACTCAAACAAGCTAGTAAGCTTTTGAATG
CGTCCTAAAATCAAGTCGTAAATATGGTGTCGTTCTGAGTGTCCCTATAT
CTCGCTCANCTTTTGAATGCGTCCTAAAATCAAGTCGTAAATATGGTGTC
ATTCTGAGAATCCCTATATCTCGCTCAGTCATTCATTACTATCAAGTCGA
AATGCGTCTACTATCCTTACATTGAGTGAACATCGTCAGTCTATACTTTT
CCTTTCACACACTTGAAGGAGTAAAAAAATTAATTTTTTATTATTTTAAT
GATTTTTATGAAAACTACGATGAAATATTTTATTTTGGTTTTAATTTTTG
TACTTTCCTATTTTCTGTGATATTACATTCAAAAAGACATCATTCTTGGC
ATCAAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013522-exon-sc0000168-1575043694:492379..492593 | TCONS_00013522-exon-sc0000168-1575043694:492379..492593 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1575043694:478564..479296 | TCONS_00013522-exon-sc0000168-1575043694:478564..479296 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1575043694:477558..477776 | TCONS_00013522-exon-sc0000168-1575043694:477558..477776 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1575043694:476885..477292 | TCONS_00013522-exon-sc0000168-1575043694:476885..477292 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1510915933:492379..492593 | TCONS_00013522-exon-sc0000168-1510915933:492379..492593 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1510915933:478564..479296 | TCONS_00013522-exon-sc0000168-1510915933:478564..479296 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1510915933:477558..477776 | TCONS_00013522-exon-sc0000168-1510915933:477558..477776 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1510915933:476885..477292 | TCONS_00013522-exon-sc0000168-1510915933:476885..477292 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1491911889:492379..492593 | TCONS_00013522-exon-sc0000168-1491911889:492379..492593 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1491911889:478564..479296 | TCONS_00013522-exon-sc0000168-1491911889:478564..479296 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1491911889:477558..477776 | TCONS_00013522-exon-sc0000168-1491911889:477558..477776 | Clytia hemisphaerica | exon |
| TCONS_00013522-exon-sc0000168-1491911889:476885..477292 | TCONS_00013522-exon-sc0000168-1491911889:476885..477292 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168 | supercontig | sc0000168:476885..492593 - |
Blast
BLAST of TCONS_00013522 vs. Swiss-Prot (Human)
Match: ROA2 (Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo sapiens GN=HNRNPA2B1 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.836e-23 Identity = 57/182 (31.32%), Postives = 96/182 (52.75%), Query Frame = 3
Query: 390 REEMCKMFVGGLDKTTTDEEFKELFAEHGEIKDFIIIRKENSKSDRLFGFITFAQCDDLERCLLKRPHNYKSKELDVKRAVPKSSGNDEQGHYKVKKLHVANLPPDFKVKTLRRYLKARHSEEFGKIEDINFLTKEEGGKTVNKGFGFINVSTEDFADRIAIGENKFTLDNNALRISKAKPR 935
+E+ K+F+GGL TT+E + + + G++ D +++R SK R FGF+TF+ +++ + RPH+ + ++ KRAV + H VKKL V + D + LR Y EE+GKI+ I +T + GK +GFGF+ D D+I + + T++ + + KA R
Sbjct: 17 KEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF-----EEYGKIDTIEIITDRQSGK--KRGFGFVTFDDHDPVDKIVL-QKYHTINGHNAEVRKALSR 190
The following BLAST results are available for this feature:
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