|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013732 ID=TCONS_00013732|Name=TCONS_00013732|organism=Clytia hemisphaerica|type=transcript|length=1131bp
TTTTAGGTCTAATAACACCACAACAGAAAAATGTCAGTTTCTTCGATTCC
CTCGATTCCATCGATTCCATCGGATGAAGAATGCGAGGAGATCCAACTCC
CTCCTGATGCAGAACGTCTCACTGAATGTCTCACGGTACTGGATACAATG
CTGGGTAGTTTAGAAGAAAGATTGGTCAAAACTGGCATAACTACATCATA
TAAAGgagTTTGCGCACAATGTGAGGAAGCGATTCACGGTGAAGTGTGTA
CCGCATTCGGTAAAACATGGCATCCGTATCATTTCTTGTGTGAAGTATGC
GGAAACGAACTGTGGCAACAGATGTTTTATGAGAGGGAAGGAAAAGCGTA
CTGTGAAAAAGATTATACTGAGAAATATTCACCCAAATGTGAAGCATGTA
AAGAAATCATCACTGATgCTTGTATCATGGAAAATAAACGCGTATGGCAT
CTAGAACATTTCAAATGCAGCGAATGTAAACAATTGATAGACACAGAGAC
TGGTTTCCACGACCATCAAGAACAAATCTATTGTACTGGTTGTTATCAGC
GTTTGTTTCTACCAGTTTGTCCTGTATGTAAAACATATGTTCATGGGATA
GTCATGAAtggaaaatttcatcaaaaatgcTTTAAGTGTGCTGATTGTCG
GCATTCACTAGAAGGGAAGAACTATTACGAGCACGAAGGGCGTATCTACT
GTGAAACACACTTCCGTGCTAAACGTCGAAACATTTGCGCCAAATGCAAT
AAATTGATCATCAAATCATTCATTACAGCTATGGGAGGAAAGAAATTTCA
TCCAGAGCATTTTACATGTTCGTTGTGTACCTTTGAGTTGAACAACGGGA
CATACAAAGAAGCAAAAGGCCGACCCTACTGCGAGAAATGttatttgaaa
acatttatGAGGTACTAGAGAACCTTAATGTATTTTTGACCTTAAGGACT
TTTTCCTCTGATTAGAGAAGCTTTTGAACTTTCAATTGTCAATCGAGATA
GACCTTGTTGCTATTTGAAAAAATGAGCTTCTACTCTAGAGAGCCATAAA
TTCATTCAACTCGCACTTATTCGAACCTCTgtaatctttctgtaattcga
gctTAAAAACTGGTCCCTTCCACTGGAAAAA Run BLAST on NCBI protein sequence of TCONS_00013732-protein >TCONS_00013732-protein ID=TCONS_00013732-protein|Name=TCONS_00013732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
MSVSSIPSIPSIPSDEECEEIQLPPDAERLTECLTVLDTMLGSLEERLVK
TGITTSYKGVCAQCEEAIHGEVCTAFGKTWHPYHFLCEVCGNELWQQMFY
EREGKAYCEKDYTEKYSPKCEACKEIITDACIMENKRVWHLEHFKCSECK
QLIDTETGFHDHQEQIYCTGCYQRLFLPVCPVCKTYVHGIVMNGKFHQKC
FKCADCRHSLEGKNYYEHEGRIYCETHFRAKRRNICAKCNKLIIKSFITA
MGGKKFHPEHFTCSLCTFELNNGTYKEAKGRPYCEKCYLKTFMRY Run BLAST on NCBI transcript from alignment at sc0000171:429760..441621- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013732 ID=TCONS_00013732|Name=TCONS_00013732|organism=Clytia hemisphaerica|type=transcript|length=11862bp|location=Sequence derived from alignment at sc0000171:429760..441621- (Clytia hemisphaerica)
TTTTAGGTCTAATAACACCACAACAGAAAAATGTCAGTTTCTTCGATTCC
CTCGATTCCATCGATTCCATCGGATGAAGAATGCGAGGAGATCCAACTCC
CTCCTGATGCAGAACGTCTCACTGAATGTCTCACGGTACTGGATACAATG
CTGGGTAGTTTAGAAGAAAGATTGGTCAAAACTGGCATAACTACATCATA
TAAAGGTAGCTCTCATTCAACTTCTGATGTCTACCAGATGTGAATGTTGT
ATTGTTTTAGTTAGTCTTTGTTTTTCAGATTTCGTAAAAGTTAAGTAACT
TAAGGGCTCTGACCATAGTCCAAAAATTGATTTTGGTATTTGAACATAAA
AGTTATATTTCATTTTCCTTAACACCTTTAACGAAAAATTGCCTTTATAA
ATTGCTTTTTAATCGAATCCCTTAAGAGTAATTGCCCCCGCAGGAGCGCA
GCGACGAGGAGGCACTCATAGCTTCACGCATAGATATTGGACTGGAATCT
CGAAATTTTGTTGTTTGTTGTCGCGCAAGCATCCCCGTAGTTAGTCTCTT
CCGTAAAATATTCGGGTTTTTTCGGTTGTANAGCTTCACGCATAGATATT
GGACTGGAATCTCGAAATTTTGTTGTTTGTTGTCGCGCAAGCATCCCCGT
AGTTAGTCTCTTCCGTAAAATATTCGGTTTTTTTCGGGACGGTTGTATAA
ATATTTTCATATTACGTTATTATATGCTATTACCATTATTACATATTACG
TGTTATTAGTTTTGATTTACCACTGAAAAGCTGAAGCGAGTGTTATAAAT
GCAAATTATAACAGGTGTATGATATAACACAAATTACAATATTACTTGTG
CATATCAAAACAAACAAAATGGCAGACTGATTATAATGATGAGCTGATTC
ATTGACTGGAAAAAGTGTTTGGTATGTCAAATTTAGTTTCTTGTCTTTGA
AACTGAATACTAACTACTGTTATTTAGTCAGAAGTTCACTTCAGCAATGA
TTTGAATTCTTTTTCCGGAATCTTTAAAGAAATTTACACAAGTTTTCNAG
GCGCATTTTAACTTTTCTCGACTGTACGTCTGAATGAAGCACAATGGCAT
TTCTTTATTTTTCTTTTGGCCAACAACATAGAAGATTTTGCTTGAGAAGT
GCAATCACAGCGTACACAAGTGGAGCCCGGGCCTTAAGTAGGATTGGTTT
CTATTTCACCCAATTTAAGATGGCACAGANATTTTATTAATAACTACCTT
TATTGTTTATAGGGCTTCTTGAGCTTTAAATACCATCATATGGTCGTAAC
TCGAGAAAGTCCTTCTTAACTTAGTAAAACAAAGATACCGGCAAAGTACA
AAAAAGTTGAATGACGTACGCATATGTAAAGTTGAATCCAAACGTGGTTG
AATGAATGTTGAATANATTTTATACGCAGTATCCTCTTGACTATTGTTTA
TTAGGCAAAGTAGCAACAGAGAAATGTTGAAATATAGCAGCCAATGAAAA
AAAACAAGTTATTTCTGATTGGTTGCCTTGTTGATTTATTCACCGCTANG
TTGAATGTCAATCAATGTAAACAAACTTTTTCTTTTGGTCTTCAAAATAA
TTTACCTCACTTAGAGTGTTTTTACTGTCTTTTCAGTGTGGTATTAAATC
TATTTCAAAAACCTGAAAAAAGTTTGTTTACTCGTTTAACTTTACATGCG
CACGTTCAACTTTTTCATGCAGTTTTGATAGCCTAAATAACTTACGCTCC
AGTGGTTTGGTGAAATAGCTCCAATTCTGGCTTTCCAAGTTAGTAGAGAC
CTTCCGNATATATTGTTGTAAGAAAGAAACTGGGAGAAAAAAAACAAACA
GGAGATGTGAAAACCAGTAAGCTAATGATACCATAATTTTTGAAATATAC
TTTTGAGAAGCTTTTCCTTAAATTTTATCAAATTATCAAGCTGTATTACA
TTGTATTGTATATGAATTCTTCAAGTATTGTGTTAATGGAATATAATTTT
TTTTTCAAGCATATGCCTCAATCAATTAATCAATCATTCAATAATTAAAT
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCTG
ATTATTTTTACTACTTTAATCTTTAAAGCATTAAAAGCTTTAAGTGCATG
ACATGATCTTCTGCGTGGGCATTTAGTGAAAGCTATGACTAGTCAAAAAT
TTAATTGCAAAAATGACGTTATGAACTTTAAAAATATGGTAATAATATGT
TGCATCACCCTCTTTTACAAAAAATGCTTATTTTTAATGGGTAATTAACT
TTTTTGAGTTATGACTGTTTTTTAAGCAAAATTCAGATAAACAATTGATG
AAAAACCACTATTTTGAAGATTTCGAGACAAAGAAGCATTTACAAAAATT
TTCCGCAAAAATTTTTATTGTTCGGTAAAAGATACACCATCTACTGCGAA
AATTTTTTCAAAATATTTTTTCTTCGCCGAAACTAAGCTCTTCAAAGTTG
AAATACTCTTCCTCACAAAAGTCTTCATTTTCTTTTTCATCAAATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AATTTTCAGATTCAGGAATAGTTTGTCTAACAGAAAATGTATAACATGCC
ATAGTTTTGTTGGTTACATCAGTCAGAAAACACATTTTAAACACGGCAAT
TTTGAAAAATTCACTATGGTCAGAGCCCTTAAGGAAAATCCGCCATTATA
GAATAACGCGTTCGAATTCGTAAAGTCGGTCGACGATCCTATCGTCTGCA
CAAGATCACTAAAAAAGGGAATAGTTTAGGAGAGGTGTGATAAATTCGGG
TGGAGTAAGCAGTGGCGGAGATGTTTACAGTGTAGACGATACCAATTTTG
TTCCAAAACTCTACCACCACTTTTTTCCCGTAAACCGCCCTGACGCCCGA
ACTTTTCCCGCGTTTACTGACCTTTAAACGGACGATAGCATCGTCTATAA
AGTCGGGCGCTCACGCCAATCGAAAGTGTTTCCATAATGGCAGAAATTAT
GTAGCTTAGAAAAGCTGAAAAACCTCTATTACTTTAGCTTCATTTTCCAT
GAGCCCAAGGATAGGTTTTGTAAAAAATATGTAATAGATTTGGTATATGA
CAGTGCCCGAATTTCGTCGGTCAGCCCCCAGACTTCGCCAAGTTCAAAAT
TTTGCTAAAAACAGGATAGAGACATATCCAAAACATGGAGGTATAAAGAA
ACAGGAGAAGTATGCTATTGTAACCATGCTCGCCCTACGATTAAAAAAAT
TACGAGGTATGCATGCTCATAATCTCATGTATCGTGCATTTTTAATGAGC
TCTTTTGTTGATAGGTGAAATCTTATTGGCTAACTTAAGTGTTGGAAATA
AGATGAGACGAGATTCATTGTTTCTGACATTGGTGTAAGAAAATATTTGG
ACTAAAAAAGGGCCTGTAAACTTTGCAATCTTTCATCAAATGACAAGATT
TTTCGATCAACATTTTCTTCAAGGTGAACCCTATTGCTTGATACTTTCCT
CCAAAATTCTCCAGCGACTTTTTGTCTACAAATTGGGTCTGAAATTGTGT
GTGCTTATAAAGAACTTTTTATTTTCTGGCTAGAGAAAATATCTTTTCAA
AACAAAATTTAATGGATGCCAAAATTGAACGCAAACTTATTTCGTGGAGC
TAAATTTTATTTTATTCTCGTATATTAGAAGGCTAGAAATCTTCGATGCT
GATAGTAAGAATGTTCAGAACAGACTACAGTTCTACTAAAAAGTCGTATT
TCGTCGGGCGAGCCTAGAATTTCTTTTGATTTATTACATAAAAGAAATCA
AAAGACTTTAACGACCAATTACCGACAAATTCATCTCCTGTCTTTCTTTA
TACCTCTATGTCCAAAACGAGTGTAATCTAGATACTTACTTTATCCACGG
TAAATACATCACATCGTTCGAAACATAATTTCAAGTTTTTTTGTTGTTTT
ATTCTTTTAAACAGGTTATCCCTTTTCGATAACAGTACATCGTTGGGAAT
AAATTTTTTGCAATAAATGTAAGAAAAAAACGATCACTTTCTTAGGTTTA
TCTCATTTCCATAAAAAATATCGTTGGAAAGCTTGTTACGAGATTATGAA
ATCACACGACTTATTTTTCAGGAGTTTGCGCACAATGTGAAAAAAAGCAA
TCACATTCTTAGATTTATCCCATTTTCCATAAAAAATATCATTGGAAAGA
TTGTCACGAGATTGTTTCATTTTTTTTCAGGAGTTTGCGCACAATGTGAG
GAAGCGATTCACGGTGAAGTGTGTACCGCATTCGGTAAAACATGGCATCC
GTATCATTTCTTGTGTGAAGTATGCGGAAACGAACTGTGGCAACAGATGT
TTTATGAGAGGGAAGGAAAAGCGTACTGTGAAAAAGATTATACTGAGAAA
TATTCACCCAAATGTGAAGCATGTAAAGAAATCATCACTGATGTAAGATC
GATTGAGTTCCTTTGTAGTGTTTAAAATGCTTGGGAAAATAAACTTCGTT
TTTTTCGGTTGAAGGTTTAATCAAGAAAATCCACATTGATTTTTTACTGA
TGCGAACACGATTAGCCAAAAACCCAAAGACTCTTCAAATTGACTCCAAG
TCATGTCTGATGATGTAAAACACCCATGAGAGCTCGTAAAAAATTTTCAT
TAACACGTTCGACTACGAGTATATACTCGGAATAGTTGCGTCAACCCGGG
GAGGGGGTACTTAGGCAAATGGAAGGTGCGGCATGTGCCGCCCTTAAGGA
TACCTTTTTTGGGTTTCCAAAGTCCCGCTAATGGTCGAAAAAATCAATTT
TTCAAACTCATCAAATTTCAACTTTTTACCCCCGGAAATATCGAAATCTG
GTCAGGGTGCGTCAAATACTGGTGGTATTTTAAAGGGTCATAACATTTGA
TGCAGAAACTTTTTTTTAAATCTTTTGGACTCGTGAAACTACGTGAAATT
CTACATCGATCAGTGTACAGTTTAAAGGCATTTGAAATAAAACCAAGGCC
CCAGGAGCCTCTGAAAGTAAAACTTTTGATGAAATTGATCGATTGAAATG
GGCTCAGTAGTGAACGTGTTAACAGCTGGCATTCATCGAATCCCGGACAA
CAAAGTTCAAGCCAGATAACGCTCACTCTCTTAAAGCTTTAAAAACACTT
TGAATTACATAGTGGATCCCGAGGAGAAATTCCTATCTAAGAAGAATCCG
GGCAGGGGTCTGTAATTATATCAAGTTGCTCAACTTAAATGTTTATAAGA
GTTCTCAACCGAGGGCGTGTTCAGGGCCTGAAATTAAACATTCAAACTTT
TATTTTGATAGGCTTGTATCATGGAAAATAAACGCGTATGGCATCTAGAA
CATTTCAAATGCAGCGAATGTAAACAATTGATAGACACAGAGACTGGTTT
CCACGACCATCAAGAACAAATCTATTGTACTGGTTGTTATCAGCGTTTGT
TTCTACCAGTTTGTCCTGTATGTAAAACATATGTTCATGGGATAGTCATG
AATGGAAAATTTCATCAAAAATGCTTTAAGTGTGCTGTAAGTTCAAAATT
TTAATACTTTGCTTAATACATTAAGTGTCACTGACATTTTTTTTCATTTT
TTTTATTTATAAGAAATGGCACAAACATAGAATACAAACACTAAAAGGTT
CCAGCCCTCCCGCAAAAAACCGCTAGATTTTACCGCCAGGAGTAGAGAGA
GGAACCTTATAAAAAGAAAAAAGAAAAACGAGAAAAAAAGAAATACATTA
GAAACGTAATTACTCAATTATTCGGTCCTGTACCGGAAAGTCTGGACTGA
GATGTCACCCTGCTTTTAACTCCACCCGAATAAAAAAGTTCATATTGGCA
TCTTTTGATTTAAGTTGGAGTGTACATGCGTGTACACGTATTCAAGAAAT
ATTTGAAAATTTGAAGTTACGGAGAGATGGAAACTTAATGGCTTAATGGA
GCTTCAATCATGTGATAAAGTTTAATCAAGTTCGATTTAGAAAAAAATCA
GTTCGATTAACTCACTTCAGTTTGATGAAGATCTATGTGAAATTGATTAT
AAATTTAAAACTCTGCTTTAAAAATAGAAGTAAGTCGTTGATCTAACTGT
AGACAAGAGTTAAAACCAAAATTGAGACAGCCGAATTCTATATACCGGGT
CACGTACTTTACAAGAACAAAATCTACGTTTAAAGTCACCATCTTTTTCA
AAAAAAGATTCAGTCTACCAGTTTTGAGTCGACTTATCCGACAAAGTAGA
CAAAGTAGAAATTCGGCCGTCTAGCCTAGTGAAAGTTACCTTGCTAATTT
TCTTGTTATGTGACGTGTAGAGAATATGACGAAAATAATTGACGTCAAAT
AAAAAAATACTATGAAAAGATTCCTTACTTTTTGAAGAACTTCAGTTTTG
AAATAAACCTAGCGTATGCAGAAGTAACTTCTCATCCTGAGCTGTCTTTT
AGTGCAAATTGTAAGAATTGTATCTAAAAGTTGAATAAACGAATTAAAAT
GATGCAGAAAGCCAGTCAAGACTACAGACGAGGTGCTGATAGATATTTGA
AAAGGGTTGACTTGGAACTACCAAAGAAAAGCTGCGACAATCAAATATCC
AGCTCAAGTGCCGCAAACAACCAAGATTCACGTAAAGGAAAAAATCGAAA
ACACAACAAGAAAGGAAAGGGAAGAAACACTCGTGTTTATACTTCCAATT
ATCAGACTTTCTCAAAGAAGCACAATGATAGCCTGAATACCAACGATCGT
GAAAAGTCATCACCTATAATCAACAGCAAACCATCCGCCAAATTGATCAC
TTTCATCGATCGAAATGGCGTAGAAGTGACTGTTTCTCACTCAAAGTATC
AACAGTTGAAAGAATGCGGTCTAATTTTGCTTCCACCGTTGCAAAAACCC
GACTCAGCTGCAAACAGCCACTGTAACAAAGTTGCTGAAAAACCAACACC
TAAATTGATCACGTTCGTCGACCGAAATGGCGTAGAATTGACTGTTACTG
AGTCAAAGTATAAGCAGTTGAAAGAATGTGGTTTGCTCCCACCCACAGTA
CATCAACCATTGCAAAACAAGTCCAAATCATCCACAAAGAGCCAACGTAA
CAATGTTACTGAAAAATCAACACGCAAGATGGTCATCTTTGTGGATCGAA
ATGGTACAGAAGTGACTGTTTCTACTTCTAAGTTCGAACAGATGAAAGAA
CGCGGATTACTACTGCCATCTAAAGTTTCGCCGTCGCAAGACAAGTCCAA
TTCAGCCGCAAACAGCCACCCTGGCAAAGTAACTGAAAATTTGGCACCTA
AATTGGTCACTTTTGGTCATGTCGATCGAAACGGCGTAGAAATAAAGAAT
AATGGCGGTCTTATTCCTGAAACCGTAACTCCACCATTGCGAAACAAGTC
CGATTCAGCCATAAAGAGCCACCGTAACAAAATTGCAGAAAAAACAGCAC
CTAAATTGATCACTTTCGTCAATCAAAATGGCGTAGAGCTGACCGTTTCT
CACTCAAAGTATCAGCAACTAAAGAAGTGTGGTTTGCTTCCACCGTCGCA
AAAGCCCAACTCAGTCGCAAACAGCCACTGTAACAAAGTTGCTAAAAAAC
CAACACCAAAATTGATCACTTTCGTCGATCGAAATGGCGTAGAACTGACT
GTTACTGAGTCAAAATATCAACAGTTGCAGGAAAGCGGTCTATTTCCACC
CACAACACTCACGCCTTCACAAACCAAGTTCAACACCATCGCAGAAAGAA
ACAAGAGAGAAGATAAGCAAAGTCTTCAATTGCTTCTGCAGCTTACTAAA
GATGAAGCCATATCAAAAGAACGTTTAGCCTTTGCCGACAAACTAATGAA
GGTAGCACAAGAGGCCTCCCTTCCTGAGGACGACGGCGATTGGTGAATTC
ACAAAAACAACAAAATAAAAACAAAAAACCTTTCAATTTTGTATTCCTTT
TACATTTATTGTAAATATATTTCCGTACCATAAAATTATAATATCTGTCA
GTTTAATTGCTCTTTACCAATGGTAAACTAAACCCTGGGGGTGTGGCGTT
GTGTATTTTATGAAATTCATTGCATTTCATACACTCAAAATAAAACTTTA
TCTCAAGCTTACTTAAGTCTGAATTTTGTATTAAGCGACTTTCAGAGCTT
TAGTTAGTTTTTTCCTTTAAATTTGAGAAATTTCGTAACAGACCAATTTC
TATTTTAAAGCTTTTATTTTTACATAAGTGTTCTCGTTTCATATCAGACA
CATATTTCATATCAGAACAGGGTCTACCTATTGTTATATTATGCTGATAT
AAGCAAAAAATATTTTTCTTTTCCTCTTTCTGACCAATCTTGCTCCACAT
CCCTGTCAATTCAATGTGCTGGTGAATTAAAATTGATGAGTAAGAAAACG
ATATCACTTTTATTTAAGAACAAAACCTTTAATTTCAAATTTCAAGATTC
AAGAATTTTAGACAGAAAATGTGTAACATGCCCCCGCTTAAAGCTTTTCA
GATTTTCATTGAAAATACTAGGACTGCTGACTTCACTCGACTCAATTTTA
TTAAAATTGTCAAAAACAAAGGTCAGCCAGAAGTAGACTCCGTCAAACCT
ATGTTTCAATACAGACTCGTCTCTAAAACATTCAAAACAAACGTGTCGTT
TTTTAAGGATTTAAGGGAGAAATTCTAATTATTGAGAACTATTGAGAAAT
ATTGAGAAATTCTAGGTTCTTCAATTAAAATATTTATCTTCCCGATTGCT
GGCACGCACTGGAAGGCAATAATAATGGAATTTATATTAAGATTTGAAAT
AATTTATTTAGACAAAAATCTGTCTTAATCAGAGCTAATATTGTTGACTT
TTCTACAACGACACTGCTCAATTTCCACGAAAATGAACGGAAAATAGACA
TTAAATAGATTCAATGACTTGTTTTATAGCCAATCATTTTTCTTCCAATT
TAGGATTGTCGGCATTCACTAGAAGGGAAGAACTATTACGAGCACGAAGG
GCGTATCTACTGTGAAACACACTTCCGTGCTAAACGTCGAAACATTTGCG
CCAAATGCAATAAATTGATCATCAAATCATTCATTACAGCTATGGGAGGA
AAGAAATTTCATCCAGAGCATTTTACATGTTCGTTGTGTACCTTTGAGTT
GAACAACGGGACATACAAAGAAGCAAAAGGCCGACCCTACTGCGAGAAAT
GTTATTTGAAAACATTTATGAGGTACTAGAGAACCTTAATGTATTTTTGA
CCTTAAGGACTTTTTCCTCTGATTAGAGAAGCTTTTGAACTTTCAATTGT
CAATCGAGATAGACCTTGTTGCTATTTGAAAAAATGAGCTTCTACTCTAG
AGAGCCATAAATTCATTCAACTCGCACTTATTCGAACCTCTGTAATCTTT
CTGTAATTCGAGCTTAAAAACTGGTCCCTTCCACTGGAAAAAAACCATTA
AATCCTCTTCATGATTTAAATCTTTCTATTTGAGGTACTATAGAGAACCT
TAATGTATCTTTGACCATTAAGTTTAAAGCTTCGAAGTGGCTAGAAATGA
ATCTTCAACATTTCTCAAGCAAGAAAATTTGTTCAACGGTATCTGTCAAA
CTTCAGGCTCGTGTACTTTTAGAAAAGCCTGTAGAAGGTTGACATTTATA
TGAGAAATTGACCGAAAAAAATCTTGACATCATATAAAGGCTCTCATCAA
AATATTTATTAATATTTAATGTAATTAAAAACTTTTTCATTATTTTGTAT
AATTTCAAATTAAATAATATTTTAATGTAAATAATTCAATAACATTTTAA
TATATATTCAATATTTTTACGTAATATAAAAAAGCTTCATCCTCTTACTT
TTCGAAAGATTCTCTTGAAACACCCCCTTCTCACAGACCCACTAGAAAAA
CCCTTCCCAATGGAAAAATTANTTGAAACATACCCTTCTCACAGACCCAC
TAGGAACCCTTCCCAATGGAAAAATTATCCAAAAAATCGTCCACGGTCAA
AAATTATCCTCCAATTCTCGTCCCCACTGAAAATAATCAAATAAACCAAT
CCTTACTGCAAAACTATTTTTCCAATCCCCACTGAATTTTCTGACTTGAA
AACAAAAGAATTGAAGACATAAAAAATATTGGAATACCCATCCCCATCGA
GTTTCAGTCCGTTATTTTTATCCCCACTGGCTGAAAAAACCTTAACGAGT
CTGTGAGAAAGGGGGTAAAAAAGTATCAACGAATTTCATAGTTAATCATC
TGTTTGAGTTAAACCCAGTCAATGGTGATTTACCGTTCGCCAGACCAAAC
CAAATAGCATAAGTGAATTAAATTTCACATTGATTAATTTTTGCAAATAA
TGACTATTTTTGCATTAATCAGTCCTTAAAATCCGAATTTTGGCAAAAAC
CCTTAGGGAAAATGAAAAAGATTGGGTGAAAAGGAGGCCAATTCGCGAAA
TTTTGTCAACACGAAAATTTTAAATTTTAAATTCGCGAAAAAAAAGTCCA
AGTGAAAATTTATCCAATTAAGATAAAACCCATAGGCACGGTGCTTACTC
GAGGTAAGATTTCTCTTTCAGAATCGTAATAAGGTGTGGAAATATAACAA
TATTATCGCCCTTAACAAGAGAGTAACATTTTCAACATCATTTTTCAACA
TGTTTTATCGCTGGATAAAAATACAGTGATTCTTCTAGAAGAATCAATAC
TTCGTGTTTCAATCACGTTATAATCGAACCTCGTCCCCGTGTATCGCAGG
CTTTCTTTACGTTACTGATGACCGCCAGTAAGCATAAAAAAGCTGATACT
ACAACAGGGAACAAAGTTAAGTATAATGAACAATTAACGAATTGCATAGT
TAATCTTTTGTTTATACCTTGCACATGTGATTAACTCAATAAATCCTTTC
TTAAAATGTTTGCTTCCAAATGCATAACAAAGAGGGTTCAAAAATGAATT
TCCCCAACCAACGATATAACAAAACCGCCATAAACGCTCGGGCAGCCTTA
TGTTCTGACTTGAAACAATGACTGTTGACAGGTAATAAGGCATCCAGGAG
ATTGAAAAAGCAACAATGATTAAAAGCAAAAGTTGTAAGCCTTTTTTGGC
ATTCTTTTGTTGCCGATTTTTCTCAACCCTTCTCACAGTGGATCGATTGT
CACTTTTTNGAAAATAGACATTAAATAGATTCAATGACTTGTTTTATAGC
CAATCATTTTTCTTCCAATTTAGGATTGTCGGCATTCACTAGAAGGGAAG
AACTATTACGAGCACGAAGGGCGTATCTACTGTGAAACACACTTCCGTGC
TAAACGTCGAAACATTTGCGCCAAATGCAATAAATTGATCATCAAATCAT
TCATTACAGCTATGGGAGGAAAGAAATTTCATCCAGAGCATTTTACATGT
TCGTTGTGTACCTTTGAGTTGAACAACGGGACATACAAAGAAGCAAAAGG
CCGACCCTACTGCGAGAAATGTTATTTGAAAACATTTATGAGGTACTAGA
GAACCTTAATGTATTTTTGACCTTAAGGACTTTTTCCTCTGATTAGAGAA
GCTTTTGAACTTTCAATTGTCAATCGAGATAGACCTTGTTGCTATTTGAA
AAAATGAGCTTCTACTCTAGAGAGCCATAAATTCATTCAACTCGCACTTA
TTCGAACCTCTGTAATCTTTCTGTAATTCGAGCTTAAAAACTGGTCCCTT
CCACTGGAAAAA Coding sequence (CDS) from alignment at sc0000171:429760..441621- >TCONS_00013732 ID=TCONS_00013732|Name=TCONS_00013732|organism=Clytia hemisphaerica|type=CDS|length=3552bp|location=Sequence derived from alignment at sc0000171:429760..441621- (Clytia hemisphaerica)
GATTGTCGGCATTCACTAGAAGGGAAGAACTATTACGAGCACGAAGGGCG
TATCTACTGTGAAACACACTTCCGTGCTAAACGTCGAAACATTTGCGCCA
AATGCAATAAATTGATCATCAAATCATTCATTACAGCTATGGGAGGAAAG
AAATTTCATCCAGAGCATTTTACATGTTCGTTGTGTACCTTTGAGTTGAA
CAACGGGACATACAAAGAAGCAAAAGGCCGACCCTACTGCGAGAAATGTT
ATTTGAAAACATTTATGAGGTACTAGGCTTGTATCATGGAAAATAAACGC
GTATGGCATCTAGAACATTTCAAATGCAGCGAATGTAAACAATTGATAGA
CACAGAGACTGGTTTCCACGACCATCAAGAACAAATCTATTGTACTGGTT
GTTATCAGCGTTTGTTTCTACCAGTTTGTCCTGTATGTAAAACATATGTT
CATGGGATAGTCATGAATGGAAAATTTCATCAAAAATGCTTTAAGTGTGC
TGAGTTTGCGCACAATGTGAGGAAGCGATTCACGGTGAAGTGTGTACCGC
ATTCGGTAAAACATGGCATCCGTATCATTTCTTGTGTGAAGTATGCGGAA
ACGAACTGTGGCAACAGATGTTTTATGAGAGGGAAGGAAAAGCGTACTGT
GAAAAAGATTATACTGAGAAATATTCACCCAAATGTGAAGCATGTAAAGA
AATCATCACTGATATGTCAGTTTCTTCGATTCCCTCGATTCCATCGATTC
CATCGGATGAAGAATGCGAGGAGATCCAACTCCCTCCTGATGCAGAACGT
CTCACTGAATGTCTCACGGTACTGGATACAATGCTGGGTAGTTTAGAAGA
AAGATTGGTCAAAACTGGCATAACTACATCATATAAAGGATTGTCGGCAT
TCACTAGAAGGGAAGAACTATTACGAGCACGAAGGGCGTATCTACTGTGA
AACACACTTCCGTGCTAAACGTCGAAACATTTGCGCCAAATGCAATAAAT
TGATCATCAAATCATTCATTACAGCTATGGGAGGAAAGAAATTTCATCCA
GAGCATTTTACATGTTCGTTGTGTACCTTTGAGTTGAACAACGGGACATA
CAAAGAAGCAAAAGGCCGACCCTACTGCGAGAAATGTTATTTGAAAACAT
TTATGAGGTACTAGGCTTGTATCATGGAAAATAAACGCGTATGGCATCTA
GAACATTTCAAATGCAGCGAATGTAAACAATTGATAGACACAGAGACTGG
TTTCCACGACCATCAAGAACAAATCTATTGTACTGGTTGTTATCAGCGTT
TGTTTCTACCAGTTTGTCCTGTATGTAAAACATATGTTCATGGGATAGTC
ATGAATGGAAAATTTCATCAAAAATGCTTTAAGTGTGCTGAGTTTGCGCA
CAATGTGAGGAAGCGATTCACGGTGAAGTGTGTACCGCATTCGGTAAAAC
ATGGCATCCGTATCATTTCTTGTGTGAAGTATGCGGAAACGAACTGTGGC
AACAGATGTTTTATGAGAGGGAAGGAAAAGCGTACTGTGAAAAAGATTAT
ACTGAGAAATATTCACCCAAATGTGAAGCATGTAAAGAAATCATCACTGA
TATGTCAGTTTCTTCGATTCCCTCGATTCCATCGATTCCATCGGATGAAG
AATGCGAGGAGATCCAACTCCCTCCTGATGCAGAACGTCTCACTGAATGT
CTCACGGTACTGGATACAATGCTGGGTAGTTTAGAAGAAAGATTGGTCAA
AACTGGCATAACTACATCATATAAAGGATTGTCGGCATTCACTAGAAGGG
AAGAACTATTACGAGCACGAAGGGCGTATCTACTGTGAAACACACTTCCG
TGCTAAACGTCGAAACATTTGCGCCAAATGCAATAAATTGATCATCAAAT
CATTCATTACAGCTATGGGAGGAAAGAAATTTCATCCAGAGCATTTTACA
TGTTCGTTGTGTACCTTTGAGTTGAACAACGGGACATACAAAGAAGCAAA
AGGCCGACCCTACTGCGAGAAATGTTATTTGAAAACATTTATGAGGTACT
AGGCTTGTATCATGGAAAATAAACGCGTATGGCATCTAGAACATTTCAAA
TGCAGCGAATGTAAACAATTGATAGACACAGAGACTGGTTTCCACGACCA
TCAAGAACAAATCTATTGTACTGGTTGTTATCAGCGTTTGTTTCTACCAG
TTTGTCCTGTATGTAAAACATATGTTCATGGGATAGTCATGAATGGAAAA
TTTCATCAAAAATGCTTTAAGTGTGCTGAGTTTGCGCACAATGTGAGGAA
GCGATTCACGGTGAAGTGTGTACCGCATTCGGTAAAACATGGCATCCGTA
TCATTTCTTGTGTGAAGTATGCGGAAACGAACTGTGGCAACAGATGTTTT
ATGAGAGGGAAGGAAAAGCGTACTGTGAAAAAGATTATACTGAGAAATAT
TCACCCAAATGTGAAGCATGTAAAGAAATCATCACTGATATGTCAGTTTC
TTCGATTCCCTCGATTCCATCGATTCCATCGGATGAAGAATGCGAGGAGA
TCCAACTCCCTCCTGATGCAGAACGTCTCACTGAATGTCTCACGGTACTG
GATACAATGCTGGGTAGTTTAGAAGAAAGATTGGTCAAAACTGGCATAAC
TACATCATATAAAGGATTGTCGGCATTCACTAGAAGGGAAGAACTATTAC
GAGCACGAAGGGCGTATCTACTGTGAAACACACTTCCGTGCTAAACGTCG
AAACATTTGCGCCAAATGCAATAAATTGATCATCAAATCATTCATTACAG
CTATGGGAGGAAAGAAATTTCATCCAGAGCATTTTACATGTTCGTTGTGT
ACCTTTGAGTTGAACAACGGGACATACAAAGAAGCAAAAGGCCGACCCTA
CTGCGAGAAATGTTATTTGAAAACATTTATGAGGTACTAGGCTTGTATCA
TGGAAAATAAACGCGTATGGCATCTAGAACATTTCAAATGCAGCGAATGT
AAACAATTGATAGACACAGAGACTGGTTTCCACGACCATCAAGAACAAAT
CTATTGTACTGGTTGTTATCAGCGTTTGTTTCTACCAGTTTGTCCTGTAT
GTAAAACATATGTTCATGGGATAGTCATGAATGGAAAATTTCATCAAAAA
TGCTTTAAGTGTGCTGAGTTTGCGCACAATGTGAGGAAGCGATTCACGGT
GAAGTGTGTACCGCATTCGGTAAAACATGGCATCCGTATCATTTCTTGTG
TGAAGTATGCGGAAACGAACTGTGGCAACAGATGTTTTATGAGAGGGAAG
GAAAAGCGTACTGTGAAAAAGATTATACTGAGAAATATTCACCCAAATGT
GAAGCATGTAAAGAAATCATCACTGATATGTCAGTTTCTTCGATTCCCTC
GATTCCATCGATTCCATCGGATGAAGAATGCGAGGAGATCCAACTCCCTC
CTGATGCAGAACGTCTCACTGAATGTCTCACGGTACTGGATACAATGCTG
GGTAGTTTAGAAGAAAGATTGGTCAAAACTGGCATAACTACATCATATAA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013732-exon-sc0000171-1575043694:441417..441621 | TCONS_00013732-exon-sc0000171-1575043694:441417..441621 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1575043694:437030..437241 | TCONS_00013732-exon-sc0000171-1575043694:437030..437241 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1575043694:435936..436160 | TCONS_00013732-exon-sc0000171-1575043694:435936..436160 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1575043694:429760..430248 | TCONS_00013732-exon-sc0000171-1575043694:429760..430248 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1510915933:441417..441621 | TCONS_00013732-exon-sc0000171-1510915933:441417..441621 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1510915933:437030..437241 | TCONS_00013732-exon-sc0000171-1510915933:437030..437241 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1510915933:435936..436160 | TCONS_00013732-exon-sc0000171-1510915933:435936..436160 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1510915933:429760..430248 | TCONS_00013732-exon-sc0000171-1510915933:429760..430248 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1491911889:441417..441621 | TCONS_00013732-exon-sc0000171-1491911889:441417..441621 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1491911889:437030..437241 | TCONS_00013732-exon-sc0000171-1491911889:437030..437241 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1491911889:435936..436160 | TCONS_00013732-exon-sc0000171-1491911889:435936..436160 | Clytia hemisphaerica | exon |
| TCONS_00013732-exon-sc0000171-1491911889:429760..430248 | TCONS_00013732-exon-sc0000171-1491911889:429760..430248 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000171 | supercontig | sc0000171:429760..441621 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001781 | Znf_LIM |
Blast
BLAST of TCONS_00013732 vs. Swiss-Prot (Human)
Match: PAXI (Paxillin OS=Homo sapiens GN=PXN PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 2.850e-69 Identity = 112/259 (43.24%), Postives = 154/259 (59.46%), Query Frame = 1
Query: 139 LDTMLGSLEERLVKTGITTSYKGVCAQCEEAIHGEVCTAFGKTWHPYHFLCEVCGNELWQQMFYEREGKAYCEKDYTEKYSPKCEACKEIITDACIMENKRVWHLEHFKCSECKQLIDTETGFHDHQEQIYCTGCYQRLFLPVCPVCKTYV---HGIVMNGKFHQKCFKCADCRHSLEGKNYYEHEGRIYCETHFRAKRRNICAKCNKLIIKSFITAMGGKKFHPEHFTCSLCTFELNNGTYKEAKGRPYCEKCYLKTF 906
LD+MLGSL+ L K G+ T KGVC C++ I G+V TA GKTWHP HF+C C E+ + F+ER+G+ YCEKDY +SP+C C I D + R WH EHF C++C E GFH+ + YC Y +F P C C + + +N +H +CF C +C +++EH+G+ YCE H+ +R ++C+ C K I ITAM KKFHPEHF C+ C +LN GT+KE +PYC+ C+LK F
Sbjct: 334 LDSMLGSLQSDLNKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPE-GFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAM-AKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNCFLKLF 590
The following BLAST results are available for this feature:
|
