TCONS_00013984 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013984
Unique NameTCONS_00013984
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1759

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013984 ID=TCONS_00013984|Name=TCONS_00013984|organism=Clytia hemisphaerica|type=transcript|length=1759bp
cactctggtacagattAATAGAATACAAAACATGAGAAGAGGAACCccta
taaaattatttttgtttactcaGCATATGACGTCAGCACACAAAGACTGG
GTGACAACTCTAAATTTTGTCCCTGGCTATGACGTATTGGTTAGCGGCGA
TCGAAGGGGAGTCATGCGTCTATGGGATGTCAAGTCTTGTAAGCAAATCG
GAGAGGTTGCTGGTCATGGGAAGTCTATCAACGCGATCAAGTGTAACGAG
ACATCTATATTCACTGCATCTAGTGATCGCTTGGTCCGTATATGGGAACC
TTCGAAAACGTTGGACGCTCAACTTACCGCCATTAGTTCATAACGCCCGC
TACGTTTTGGTGGTTGCCGCCCTGGTAATGACTGTCTTGATGGCGATAGT
TGCCGCCCCAGTTATAAAGAAGTGGTGGTATGTGTGGAAGTTATTGCATC
TTAGAAGCTatcaaagatggttaaaaaaaGATCGATTGTATCTGACAAAC
GACTGTTCATGCACGTGGAAACGTTGTGAAATCAACCCTCATTTAAAAAC
TGCTGTTattctattacataatagatgtTACATTGCTCATATGTAACGTG
CCGTATGGTAAATACAGGTTGCATTTGGTATCGTTTTTAcatgatttttc
attttacgTATTCTGTTATCAAGCGATCACAAAAACTTGATATCATAATG
TATAAACTTATAAGGGAGATTCGCAGCTAATGATAATATTACGTGTTATA
CATATAACATCATGTTACTCTCTCTTGTATTACACTACTTTCAATATGCA
TGGAACATATTACAAAGGAGCTAATGTTAATATGCCGGCGTTATTACATT
CATAGTACGCATAACGGCAAAGATTCGTTTGTATTTTATAGAACCATTTA
AAAGACTTATTGAATTGAATTGGTTGACTTTGAAAGGACATTTTTTTCCT
TGTTTATGACAGATTTAACTCATAGCAAAAATGTGCTATTATGGAGACGA
ACGTTTTTGAAATGCCCTCTTAACTTTACGTAATTTAGTCATACTTTAAA
ACCTCTGTACCTCCATTGTAAAACATCTGTAACTTTTTTTTCGCCGTTCC
AAtggactttttcataaattacgttacgaacatcacttgcctcgttttga
aattattgccatggtaattgtttgaatacaaggcaagtgttgttcgtgac
gtaatttatgaaaaggtctatttcaaaCATGTGTGACACCCTGAAGGCTA
GTCTGAGAGTTTAACCATTTCTTTAACAGAAATTTACTAACGCAATGTTC
AAGATTTCTTCTTCCGCCACAACTAAGGTTTGCATAACGTTAAAACATTT
CCAgattaaaattagcaaaattcGAAGAATCNAGAGTTCAACCATTTCTT
TGACAGCAATTTACTAACGTAATGTTCAAGATTTCTTCCTCCGCCACAAC
TAAGGTTTGTATAACGTTAAAACATTTCCAgattaaaattagcaaaattc
GAAGAATCGAACTGAATTTATTATTTACAATATATCGTACTTATCCATAC
CAATCCAAAAGTTCCTCttaacaatcaaatcaatctgattgtgttaaatc
tcaaaattatgatGTGTAATTGAGCCAAAACATCAGCGACATAACAATTT
GATTGTTGAGGAAATTTTTGAATAGCACACcactatgcaaacgtcataat
tattactttttacaTTTGACCGGAATttaatcccacaatccttttcatct
tgattcgtT
Run BLAST on NCBI

protein sequence of TCONS_00013984-protein

>TCONS_00013984-protein ID=TCONS_00013984-protein|Name=TCONS_00013984-protein|organism=Clytia hemisphaerica|type=polypeptide|length=155bp
MTYWLAAIEGESCVYGMSSLVSKSERLLVMGSLSTRSSVTRHLYSLHLVI
AWSVYGNLRKRWTLNLPPLVHNARYVLVVAALVMTVLMAIVAAPVIKKWW
YVWKLLHLRSYQRWLKKDRLYLTNDCSCTWKRCEINPHLKTAVILLHNRC
YIAHM
Run BLAST on NCBI

transcript from alignment at sc0000175:153543..160723-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013984 ID=TCONS_00013984|Name=TCONS_00013984|organism=Clytia hemisphaerica|type=transcript|length=7181bp|location=Sequence derived from alignment at sc0000175:153543..160723- (Clytia hemisphaerica)
CACTCTGGTACAGATTAATAGAATACAAAACATGAGAAGAGGAACCCCTA
TAAAATTATTTTTGTTTACTCAGCATATGACGTCAGCACACAAAGACTGG
GTGACAACTCTAAATTTTGTCCCTGGCTATGACGTATTGGTTAGCGGCGA
TCGAAGGGGAGTCATGCGTCTATGGGATGTCAAGTCTTGTAAGCAAATCG
GTAAGCTACAACATCGTCCTTTGGGGGGAACATAATCCTAAAATACACGC
TTTTTTATAAGAATATTCTCTATAAGAATATTTATGATGAAGGTAAGGTA
AGAATACCATGAACATTGAATTTTGCCAGTACTGAACCTAAGAATGTCAA
TTGTTGAGCATTCTCACCATTAAATTGCTAATCATTACCCAGCAGTGCTA
AAATTTTAGCTTGGGGTATGTAAGATTTTGGCTGGGCTTGGATCCAAACC
TAGGAATAGCGTAAGAATATTTTAGGATGATTTTCCCCAAAATGTTAAGA
ATATTTATGATGAATTAAAAAAAGATCATTTTTATAAAAAACATTTATTC
TTTCGGTATTCAATGGTATTTTTGTGAAGGTTTTGAACCTTATTGTGAGA
TACTTGGCAATTAATCTATCATTAAAAATGCTTTAAAGATTACATCATTA
GGTTCAGTCGCCAAATTCTATGATTTGATATTCTTAGAATGTTCTTAATT
TTTGGGCCAGTTTTATCATGAATATTCTCGTAAAGTATATTCTCATAAAA
AATCGTTTAATTTTTCCTACAAAACTAATCAGTTCGCTTGAAAAAACATT
ATTACTATTAATTTTTTTTTCATAAGAAATAGTAAATTTTTGCTGAGGCT
CGGCTGTTCCTCTTTTGTTGGCACTTTGAGCCTCGTATTGTTCTTATCCT
TTGTCTTATTTATAGGATGTAATTGAGATATTTTAATTACTTTGACCACT
AAATTGCTTGAAATTGAGTAAATTCAGGCTCAGCATTGTTCTTAGATTTT
TCTTATTTTTTTGGCGATTTCGAGCCTCATTGTTCTTATAAAATTGTTCT
TATAAAATTGTTCTTATAAAATTGTTCTTATAAAATTGTTCTTATAAAAT
TGTTCTTATAAAATTGTTCTTATAAAAAAAGTTTAGCAGATTCATGTAAA
AAAGTCACGAAAAAATGCTCTGATTGGCCGAGACATGCAAAAATTACCTC
ACACTCTAAATTTTTTGAAAAAAATGTTTTATGCGTTTAATTTACAGCCA
ATTAAGAGCTTTACTCGACGTTTTTGGTAGTCTAGCATGCTAGACGACTT
AACTCAGTAAAAAATAGGAAGTAGAAAACTTGACAGGAGCATCAATATAG
TCGACTAGAATATTTTGTGCACAACAAACTTTTCATAAAAATTATATTTT
TTCATGTTTTTGGATAACATTTTCAGGGGGTCTTGTTGATTTGTTTTGGT
TTTTTTTTTTTCTTTCACTTAGAAATTCTCATTGGCGGAAATTTTTATTT
GTTTATATATTTTGTTGTATATGATTGGCGAAGAGAGACAATGTCTCGCG
TTTTTATTGGCTGAGAGAAAATCAATTTTGCGTTTTCATTGGCTTAACAT
ATTAAAAGGAGAAATCTGTTTGTTGCTAATAGTGATAACAATTATTTGAA
AAAATTAAGACAAAAGAAACGTGATAAACTATGTTATTTTCAGAGAATTT
GCTATCAAATAAATTTTTTTTCTAACTTTGGAAAGAGTTGAAAAAGATAG
AAAACTTCTTTCTGGTAGTCCTTTATACCTTTTATTTTAAAAATATCTGC
AACTTTTCTCCACACTTCATCCATCTTGAATTTGGAAGTTTTGTTTACGA
TGTTGATTGAAATGTAAATTCTCCTAACATTGGCGGCAAATTTCATCGGA
CGAACCCCCTTCCGCGCTACAGATTACAAATTTCTCATGTTTTCTCACCC
CGCAGAAATCTGCGGGCCCTGCTGGAACTCCCGTAAGCTACGGAAACCAC
CTTAGCCCAGTCGTTTATTTTAACCATATCCCGACATAAAAATTTCCCGC
TTTCAACAAAAACGTTATAAACGACTGGATTCCCAGTCTACGTTTTTGGT
TGACTTTTTACACGGATATGCTAATTCATACTAAGCACCATTGCAATGTA
TTCCATGGACCCAGTAGCTGATTGGTTGAAAGTGACGTATTGACTGATTT
TACATCACTTACAACCAATCAGCTATTGGGTCGGTGATGTAATGTCAGAA
GACATTGCAATGGTGCATATCATGAATAGGAAATTTGTATATTTAATTAC
TTTTCGATGTTACAGGAGAGGTTGCTGGTCATGGGAAGTCTATCAACGCG
ATCAAGTGTAACGAGACATCTATATTCACTGCATCTAGGTAGGAATCGTC
CTCTTCTTTGCTTGTCACATTCGTCAACCAAAGTCCGAAGNTAGGAATCG
TCCTCTTCTTTGCTTGTCACATTCGTCAACCGAAGTCCGAAGAGCCCTAC
TCTCGGGTGCCTAATCTCTAGTTTAGATAGCCGACTTTCTGCCCTGTCTA
TTCTAATTTTTAGAGTAGGCACAAAGTTAGCAGTTAAAACCTTTGCTTGG
AAAAGATGGAAAGAAGTCATGCATTGACTTTAGACAGCCCACTTTATGCC
AACTTTAATTCACGATTTGAATAGGCAGGGCGAAAAGTGGGCCGTCTTAA
TTAGAGGTAATAAACGTACATGTACGTTTATTAATTTTGACAAAAGTTTT
CCTCGGTTTCAAGTGCCTACTTTTGTTCTGAGACTAAATAATGGTGGTTT
TATCTTTTCGTCAAAATAAAAACAAAATACCAATTATTTACTCCCTAACC
TCAGTGAAAAGACCTTTCAATAGACCTTATCGGAGTTTTTGATTTTTCTA
AAAAAGCGATGCATTGTGGGATTGTTTCGAGTGTATTACAATAGAATTCC
CTCAAGGAATTCCTAAGAGATTTTTATTGTAATACACTCGAAACAATCCC
ACAATGCATCGCTTTTTTAGAAAAATCAAGAACTCCGATAAGGTCTATTA
GATTTTCATGGCTTCATTTTCAACCATGTATGTTTACTCCGTCGTTTCTG
TACGTTTATTAGGAACTCGAGAGTAGGTCGGAAATTATTATTTCTTTCGA
TAACTGTTTGTTTTGAATGCTCCACGCCACTGGATACACCTTCCTATTTG
CTTACCACACTCTTTGAGTTGGTACCGAGTTGATTGTTCTGCTAATGTGA
GCTTTTAAAGCTCATTTGATGTTAATCGATACTTCGATCATCAGTCTGTT
CGAGAGAAAAGTGAAGCCCTAATAAACACTCACTCAGCATCTGGATAAGG
CTTTCACTGTGTCTCGCTAACATTCTTTTGGGAAAAATCATCCTAAAATA
TTCTTTCGGTATTCAATGGCATTTTTGTGAAAATTTTGAACCTTACTGGG
AGATACTTGGCTAATCAATCTTTTATTAAAAATGCTTTAAAGATTGCATC
ATTAGGTTCAGTTGCTAAATTCTATGATTTAATATTCTTAGCATGTTCTT
AATTTTTGGGCCAGTTTTATCATAAATATTCCCCTAAAGTATATTCTCAT
AAAACAAGCGTGCCGATTCTGCTGTTGATTGGCATTGTGAGTGCTTCGAT
CACAGACTTCCACTGTAATAGACTGTGTTCGAAACTCAAGCACTTCCAGG
CAGGGTGTCAGGAAAGTATGGCGATAGACTCTATACCTTCACCGAAATAA
CAGCCCTCTTTGACGTCACTCTTGTCCCGATACTCGAATCTCTAATTCGT
CGATTCGCAAAGTCACACAACCATTAATTAACTCGTACCATATCGGGGAA
AACTTTGTCGGGGAAAAGTGACGAAATTTTGGCCAAGTGACGAATATTTT
TCCCCGACGAAAATTTTCCCTGACGTTTACCCGATAAGGTATATCAAAAC
ACATTTTCGACCGTAGACTTTTATAATTAATTATCCCCTAATCTCGATCC
ATCCCTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCTGTGTT
TGTCCGTTCGTCCGTCCGTTCGTTCGTCTGTTACCAACTTTTCTCAGGAT
TGAATCATAGGAATCTTTTGATTTTTGGTACAAAGGTGCAAAAATTTTTG
GGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGT
GAAAAATTTGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTA
CCATCATAGGTAAAAGATGGCTCAAAAAAGGCATGTTTATCTATAAGAAC
CACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTTT
TTATGAGATAGATGTTTTTTTTTGCTCANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGGCGTGTTTTTATAGA
AAAACTGGCCAAATTCAATATTTTTTTATAAGCACATTATCAATTACTTA
GGTATTAGCTTTTCTCGAGATTGGCTTTTTCATTGTTTATGATTTTTTGC
ACAAAGATGCAAAACTATAAACCCTCGAATATGACGGAGCCCGATTTTCG
AAAAAAAAATGTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAAAG
GGTTTTTTGGACTTTGTGAAATATTGGATCATTGTCTTCATGATCTTTTG
CATGAAAGTAGGGTACCATCATAGGTTAAAGATGGCTCAAGGAGATTTTT
GTAAAAAAAGAATTTTTCAGCTCAAAAGACGCATCTTTATCCATAAGAAT
CACTATTAATAAGCATCCATCAATGTTCTTAGCCAAATTACTCAATTTTT
CGATGAGATAGATGTTTTTTTGCCCACAAAGTCTTGAATATGAAAGATTA
TTTCAAGAGCATGAAATTTTGGTTTCTAAATGTTTTTTTTATAAGAAACA
AACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTT
TTGTCATGCTCACGTAGATATCAATTATGTATGTGTTAAATGCATAACCA
GGTAGGTCCATAAAAGTATCACTTGTTAATTTTATATTAGTGAGGTTAAG
TAAATCGGTAAAATCACGACGACGAACGAAAATTTAACAGGCTACTAGTG
AGTTTCAACCAATCAAATTTCGTATTTTCACTAGCCTTATACATTTTTCG
GGGATGTTCTGGAGTTTTTATAAGATACTTCACTAATTGGTCATTAAAAG
TAATAGAGATGACGCGTTCTTTAGAAAAAGTAACAAAATTGTTTTATCAA
AAAAGAGCTTGTAAAAACTCCAGCTTGTCCCATTTTTCGTCCGTCGTCGT
GATTATCCTTGTATGCTTAACCTCAGTATTATCTATAGGTGCGAAAAAAA
AAGACTATGACGGTTTTAGGGTGGTAAAAAAATTGCCCACGCGGCAATTG
GCGGCTACGGTCGAAAAGGTGTATTACACCTTTACATTCGACTCATTCAT
TCATGTTATTTTTTTAACATTTACCTTATCGTTCAATTCTTTCAGTGATC
GCTTGGTCCGTATATGGGAACCTTCGAAAACGTTGGACGCTCAACTTACC
GCCATTAGTTCATAACGCCCGCTACGTTTTGGTGGTTGCCGCCCTGGTAA
TGACTGTCTTGATGGCGATAGTTGCCGCCCCAGTTATAAAGAAGTGGTGG
TATGTGTGGAAGTTATTGCATCTTAGAAGCTATCAAAGATGGTTAAAAAA
AGATCGATTGTATCTGACAAACGACTGTTCATGCACGTGGAAACGTTGTG
AAATCAACCCTCATTTAAAAACTGCTGTTATTCTATTACATAATAGATGT
TACATTGCTCATATGTAACGTGCCGTATGGTAAATACAGGTTGCATTTGG
TATCGTTTTTACATGATTTTTCATTTTACGTATTCTGTTATCAAGCGATC
ACAAAAACTTGATATCATAATGTATAAACTTATAAGGGAGATTCGCAGCT
AATGATAATATTACGTGTTATACATATAACATCATGTTACTCTCTCTTGT
ATTACACTACTTTCAATATGCATGGAACATATTACAAAGGAGCTAATGTT
AATATGCCGGCGTTATTACATTCATAGTACGCATAACGGCAAAGATTCGT
TTGTATTTTATAGAACCATTTAAAAGACTTATTGAATTGAATTGGTTGAC
TTTGAAAGGACATTTTTTTCCTTGTTTATGACAGATTTAACTCATAGCAA
AAATGTGCTATTATGGAGACGAACGTTTTTGAAATGCCCTCTTAACTTTA
CGTAATTTAGTCATACTTTAAAACCTCTGTACCTCCATTGTAAAACATCT
GTAACTTTTTTTTCGCCGTTCCAATGGACTTTTTCATAAATTACGTTACG
AACATCACTTGCCTCGTTTTGAAATTATTGCCATGGTAATTGTTTGAATA
CAAGGCAAGTGTTGTTCGTGACGTAATTTATGAAAAGGTCTATTTCAAAC
ATGTGTGACACCCTGAAGGCTAGTCTGAGAGTTTAACCATTTCTTTAACA
GAAATTTACTAACGCAATGTTCAAGATTTCTTCTTCCGCCACAACTAAGG
TTTGCATAACGTTAAAACATTTCCAGATTAAAATTAGCAAAATTCGAAGA
ATCNAGAGTTCAACCATTTCTTTGACAGCAATTTACTAACGTAATGTTCA
AGATTTCTTCCTCCGCCACAACTAAGGTTTGTATAACGTTAAAACATTTC
CAGATTAAAATTAGCAAAATTCGAAGAATCGAACTGAATTTATTATTTAC
AATATATCGTACTTATCCATACCAATCCAAAAGTTCCTCTTAACAATCAA
ATCAATCTGATTGTGTTAAATCTCAAAATTATGATGTGTAATTGAGCCAA
AACATCAGCGACATAACAATTTGATTGTTGAGGAAATTTTTGAATAGCAC
ACCACTATGCAAACGTCATAATTATTACTTTTTACATTTGACCGGAATTT
AATCCCACAATCCTTTTCATCTTGATTCGTT

Coding sequence (CDS) from alignment at sc0000175:153543..160723-

>TCONS_00013984 ID=TCONS_00013984|Name=TCONS_00013984|organism=Clytia hemisphaerica|type=CDS|length=1404bp|location=Sequence derived from alignment at sc0000175:153543..160723- (Clytia hemisphaerica)
TGATCGCTTGGTCCGTATATGGGAACCTTCGAAAACGTTGGACGCTCAAC
TTACCGCCATTAGTTCATAACGCCCGCTACGTTTTGGTGGTTGCCGCCCT
GGTAATGACTGTCTTGATGGCGATAGTTGCCGCCCCAGTTATAAAGAAGT
GGTGGTATGTGTGGAAGTTATTGCATCTTAGAAGCTATCAAAGATGGTTA
AAAAAAGATCGATTGTATCTGACAAACGACTGTTCATGCACGTGGAAACG
TTGTGAAATCAACCCTCATTTAAAAACTGCTGTTATTCTATTACATAATA
GATGTTACATTGCTCATATGTAAGAGAGGTTGCTGGTCATGGGAAGTCTA
TCAACGCGATCAAGTGTAACGAGACATCTATATTCACTGCATCTAGATGA
CGTATTGGTTAGCGGCGATCGAAGGGGAGTCATGCGTCTATGGGATGTCA
AGTCTTGTAAGCAAATCGTGATCGCTTGGTCCGTATATGGGAACCTTCGA
AAACGTTGGACGCTCAACTTACCGCCATTAGTTCATAACGCCCGCTACGT
TTTGGTGGTTGCCGCCCTGGTAATGACTGTCTTGATGGCGATAGTTGCCG
CCCCAGTTATAAAGAAGTGGTGGTATGTGTGGAAGTTATTGCATCTTAGA
AGCTATCAAAGATGGTTAAAAAAAGATCGATTGTATCTGACAAACGACTG
TTCATGCACGTGGAAACGTTGTGAAATCAACCCTCATTTAAAAACTGCTG
TTATTCTATTACATAATAGATGTTACATTGCTCATATGTAAGAGAGGTTG
CTGGTCATGGGAAGTCTATCAACGCGATCAAGTGTAACGAGACATCTATA
TTCACTGCATCTAGATGACGTATTGGTTAGCGGCGATCGAAGGGGAGTCA
TGCGTCTATGGGATGTCAAGTCTTGTAAGCAAATCGTGATCGCTTGGTCC
GTATATGGGAACCTTCGAAAACGTTGGACGCTCAACTTACCGCCATTAGT
TCATAACGCCCGCTACGTTTTGGTGGTTGCCGCCCTGGTAATGACTGTCT
TGATGGCGATAGTTGCCGCCCCAGTTATAAAGAAGTGGTGGTATGTGTGG
AAGTTATTGCATCTTAGAAGCTATCAAAGATGGTTAAAAAAAGATCGATT
GTATCTGACAAACGACTGTTCATGCACGTGGAAACGTTGTGAAATCAACC
CTCATTTAAAAACTGCTGTTATTCTATTACATAATAGATGTTACATTGCT
CATATGTAAGAGAGGTTGCTGGTCATGGGAAGTCTATCAACGCGATCAAG
TGTAACGAGACATCTATATTCACTGCATCTAGATGACGTATTGGTTAGCG
GCGATCGAAGGGGAGTCATGCGTCTATGGGATGTCAAGTCTTGTAAGCAA
ATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007817XLOC_007817Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013984-proteinTCONS_00013984-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013984-exon-sc0000175-1575043694:160524..160723TCONS_00013984-exon-sc0000175-1575043694:160524..160723Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1575043694:158336..158408TCONS_00013984-exon-sc0000175-1575043694:158336..158408Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1575043694:153543..155028TCONS_00013984-exon-sc0000175-1575043694:153543..155028Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1510915933:160524..160723TCONS_00013984-exon-sc0000175-1510915933:160524..160723Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1510915933:158336..158408TCONS_00013984-exon-sc0000175-1510915933:158336..158408Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1510915933:153543..155028TCONS_00013984-exon-sc0000175-1510915933:153543..155028Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1491911889:160524..160723TCONS_00013984-exon-sc0000175-1491911889:160524..160723Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1491911889:158336..158408TCONS_00013984-exon-sc0000175-1491911889:158336..158408Clytia hemisphaericaexon
TCONS_00013984-exon-sc0000175-1491911889:153543..155028TCONS_00013984-exon-sc0000175-1491911889:153543..155028Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175supercontigsc0000175:153543..160723 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.74731	6.89956	4.32839	3.42548	11.5008	7.52232	6.4821	8.07755	4.01662	6.04989	5.19987	4.5009	6.35467	7.21332	5.11427	6.04289	7.75988	7.66782	10.7675	10.6755	6.67475	8.21085	12.1689	10.2848	9.34656	10.8658	5.94731	4.16015	10.4208	10.3435
Blast
[Close]
BLAST of TCONS_00013984 vs. Swiss-Prot (Human)
Match: KI21A (Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.618e-17
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 2 
Query:   71 QHMTSAHKDWVTTLNFVPGYDVLVSGDRRGVMRLWDVKSCKQIGEVAGHGKSINAIKCNETSIFTASSDRLVRIWEPSKTLDAQLT 328
            Q + +AHKDWV  L  VP + VL+SG R G++++W++ +   +GE+ GH   INAI  N T IFTA+ DR VRIW+     D Q++
Sbjct: 1577 QQVPNAHKDWVCALGVVPDHPVLLSGCRGGILKVWNMDTFMPVGEMKGHDSPINAICVNSTHIFTAADDRTVRIWKARNLQDGQIS 1662
The following BLAST results are available for this feature:
BLAST of TCONS_00013984 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KI21A1.618e-1745.35Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF... [more]
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