TCONS_00014032 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014032
Unique NameTCONS_00014032
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length264

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014032 ID=TCONS_00014032|Name=TCONS_00014032|organism=Clytia hemisphaerica|type=transcript|length=264bp
aaaagtatgAATTCTGGCCCAAATACTTTTAAAAGGCTTTTTCGTGAAGa
aCTGCTGATAGTGAAAGAACATTGACTGAGAGTGAAAGAACATTGACAGC
ATTAAACTTGTCAACACATGATGAAGGAAAAATGAGTGTGTTTTTACAGA
AATGGCAATGAATGTGTCAAGGAAATTTATTCAGACAAATAGAGGGAATC
AGAATCAAGTGATGAAGAAAAATCTGCACTAAATGTAGCATCCTTGATGC
TGGACAAATAAGTG
Run BLAST on NCBI

transcript from alignment at sc0000180:4586..5111+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014032 ID=TCONS_00014032|Name=TCONS_00014032|organism=Clytia hemisphaerica|type=transcript|length=526bp|location=Sequence derived from alignment at sc0000180:4586..5111+ (Clytia hemisphaerica)
aaaagtatgAATTCTGGCCCAAATACTTTTAAAAGGCTTTTTCGTGAAGG
TGAATGCCTCTTTATTAAATTAAGAATTCTTAACAAATTGCAAGAGTTTA
TGCTTGTATTCtcacattcaatttttttttaaatttgaaaatctttgaag
ctgtgaaatcaaaattttaaatgtcCCTAGTAGTAAAATCAATCATTGCC
TTAATTTTAAGACtgacatttttaaacatttttagaaCTGCTGATAGTGA
AAGAACATTGACTGAGAGTGTAAGAACATTGACAGCATTAAACTTGTCAA
CATATGANTAGAACTGCTAATAGTGAAAGAACATTGACTGAGAGTGAAAG
AACATTGACAGCATTAAACTTGTCAACACATGATGAAGGAAAAATGAGTG
TGTTTTTACAGAAATGGCAATGAATGTGTCAAGGAAATTTATTCAGACAA
ATAGAGGGAATCAGAATCAAGTGATGAAGAAAAATCTGCACTAAATGTAG
CATCCTTGATGCTGGACAAATAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007849XLOC_007849Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014032-exon-sc0000180-1491911889:4586..4634TCONS_00014032-exon-sc0000180-1491911889:4586..4634Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1510915933:4586..4634TCONS_00014032-exon-sc0000180-1510915933:4586..4634Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1575043694:4586..4634TCONS_00014032-exon-sc0000180-1575043694:4586..4634Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1491911889:4821..4841TCONS_00014032-exon-sc0000180-1491911889:4821..4841Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1510915933:4821..4841TCONS_00014032-exon-sc0000180-1510915933:4821..4841Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1575043694:4821..4841TCONS_00014032-exon-sc0000180-1575043694:4821..4841Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1491911889:4918..5111TCONS_00014032-exon-sc0000180-1491911889:4918..5111Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1510915933:4918..5111TCONS_00014032-exon-sc0000180-1510915933:4918..5111Clytia hemisphaericaexon
TCONS_00014032-exon-sc0000180-1575043694:4918..5111TCONS_00014032-exon-sc0000180-1575043694:4918..5111Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000180supercontigsc0000180:4586..5111 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	2.34659	0	0	0	1.0934	0	0	0	0	0	0.775473	0.842154	2.25029	0	0.785889	0	0	0	0	1.40395	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014032 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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