TCONS_00014137 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014137
Unique NameTCONS_00014137
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3717

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014137 ID=TCONS_00014137|Name=TCONS_00014137|organism=Clytia hemisphaerica|type=transcript|length=3717bp
aatgtctttaCGTCGTGATACGTTGTTACGCGCGCACAGTTTACCTGATG
CTAATAAACGTTCATCCAACAAGTCACACCAAGCGAAACCATCTTCGACC
GCCTCGTCGTTATNACGTTCATCCAACAAGTCACACCAAGCAAAACCATC
TTCAACCGCCTCGTCGTTATCTTCATCAACGAAATCATTGACGCCGGCCT
CTTCGACGGAAGACGTAGAGAAAAAGTTACGCCGTCGTTCTGTATTCTCC
ATTCCTTTATTCACACCTTTACGTCGAAGCTCTTCTAAAAAGAGCCGCTC
ACTCGAAGGGTCTCCGGACCCTGCACCGTCGACTTGGCGTCGTAATGAGA
AAGTTAAAAGTAAAACACCAACTGACTCACCGAAGAAATCATTATTCCAT
TTGTATAGAAACTCTTGTAGCGAGGTGTACCGATCTCCTAAACACGCTCC
GTGTAGCTCATCCGAAAAGCAGACATTTGAGCATAGTCCCTGTAAAGAGA
AAATGGTGTCTGGTAGCCAGGTTATGACGAAATCAGAATATTCTGAGCGT
AAATGGACGAACTGTCAGAAAAATAAGTCGCTGATAGGTCTAACTCACGA
GGACGTTATGAATCATATACAGAATGGGAGTATAGATTTATCTGATAATG
AACATATATACAGCAGTCAAATTTCTCTTCATTCGAGTCGGAATGGTTGC
ACCAGAGGAGACCATAGTAATGCTAGCTCTGCAGCCTCATCTCCTCGGCT
CCCGCCTAGACATGAGGCCGAACATAGGAACAATAGTTCGTACGAAAGTT
GTCCTGAGACCGGGAAACAAGATGGTGCGGACGATACTGTTTTTAAGCTA
TCGCGAAACTTTTCCTTACCTATTCGCGTCCAACATAAGTTTACGACGTC
AAATGTGGCAACAGCTAGCCCGAAAACTACTCGTAAAATGAATAATAACG
AAGATAACGAGAATACCATACAACTACGGTCTTATTCTGAGAGTTATAGT
AGCGCAAGGACACcacggaaatttaaagtttATCAAGCGAAATTTGATTC
AATGTCGAACCAAGATTACGTGCAGCTGTTATACGGAACTTTGCCTCGGG
ACGAGGCCGATCAAAATAATAATGCAGACGTTGTCTTTGTTCCCTTGAGT
TCCGCTATCTTCTCAACGGACACAACACCTATTCCTTCTACTGATACCAC
GCCCATGGGTTCGCCCTTAGATTCGCCTGGAACGCCCAATAAGAGGCACA
AACTGTTTGGTTTTTCATCTCCGAAATATCGGAAATCTCCGGCTACCTCG
CCGAAAAAATCTCCCTCAAAAACTGTTTCTCCtcgaaaatcttcaaaatc
gtATTATGACCCAGATAAAGAATCGTTGACGGGCTTCTTGTTTGTCAGTC
TTCACTATGGAAAAGGATTCGCCAAAAATTCTGATACATACGTCATCCTT
GAGATGGACTCGTACGGCCATTTCTTCAAGAAAGCCAAAACGAAACCATG
TCGCGGCTCAGACCCTTCCTGGGAAGAAGCTTTCGAATTCGAGATCGAAG
CATGTAACACGTTGAAATTGACATGTTTCAATAAGTTGAGGCTGATGGGA
GATGATATCAGTGGCAAATGTACCATTAATTTAACTCGTGAGAAATTGAC
CGACAACCGTAACCACACACTGTCAGTCAGCTTGGATCGCGGTCAAAGTA
TATTGAACATTTCGCTGTGTTTTTCCACCTCTATTGATGGTATCAAGAAA
TCACCCTCGTTTTCGGATACCGGTGTTTTTGGTGTACCCATACAAGTTGT
GTGCAAACGTGAGAAGTTTGATATTCCTGTCATTGTTTTGAGTTGCATCA
AAGAGATTGAGAAACGAGGTATGGATGAAATCGGTATCTACCGATTGTCT
GGTGTGGCATCTGAAATTCAACAACTCAAGAAATTATTCAATGAACAAAC
GCAAAATGCATTATTGGTACTAGCGGATACTGACATCCATGCAGTGGCTG
GCTTGCTCAAATTGTACCTCAGAGAACTTCCACAATCTTTGTTCACCAGT
AAATTGTATCGAAAGTTCGTACAAGGGCTCAGCATCACAGATAGTGAAGA
AAAAGAATTGTATATGGTGGAAGTGCTTCATCAACTTCCCAAGCCAAATA
AAATCACCACCCTCTATCTGTTCGATCATCTAAGAAGAGTTACGCTACTA
GAAGAAACGAATAAAATGGGGACCAACAACCTGGCAACAGTTTTCGGCCC
CACCGTCCTGCGGCCGCCATCTTCAAACAGCGATAAAGAGAATGAGACGA
GCTCATGTAATGTCGGAACTTTCGATATCGGTGCATTAGACGTCATGTCG
CAAGTTGGAATATTCCGTTATTTCCTAGGACTGAAAAACAATGAACGTAC
TAAATTACCGGCGGACGATCTAGAGCTTTGGCGGCGTTTAGATCCTGAAA
AGGCAACCAAAATGGAAGAAGATTTAATGATTACGGCTGAAGAGCACCTG
ATTTGAGGAAAAAGAGTCTGGGCACGATCTTGTGAAATCACGTGATGGGG
AAATGTCGGTCACATGTTGTAAACGTTCTCAATACGGAAGTTGAAAATAC
GTCATATGGCATCTATGGATGAGTCATTTCTTGATTTCCAAAATGAGTGC
GGAATCAAGGATTTTGATTGGATGAATTGTTTACTCTTTAGATCACCTTA
CAGATCTACTGCATTTTGAAGAGGATGAAATTAGGTCGTTATTACCATTG
TAAAGCTCATTATCAATGCCATCTTCTGCGCATGCTCTTAGAAGTAATCG
ATAAAGTAACACACTATGAAAACCCATTTCGCCACTTACAGTATAGTTAC
AGATTTTGATTCAAGTGACGTTGCAATTTTACGCACAAAATGTTTTGCCG
AAATAtcgatttttttgataaaagaatcTGAACGTATTTATTATTAGAat
atattaaaatttcaatcatgtgttaattaatttttttttttgatgcgCAC
ACACTTACTATCTAACTTTaaaagaaatagtttttttgcATTGATATTTT
CGGACAAAGTTGACTGTTACATTATTATTTCAAAGATCAAGAAATTTGCT
GTAgacaatattttttctaaaatggaTGGTTTTAGGGATTTTGATACTCA
AAGAACTTTTAGGCGTTCGGGTgttccttctttttttttagttttaaggc
taaaaaaTGCTTAAAGAGGCACCAGGGGTAACTCTGATTGAGGTATTGAT
TGTGTTTATTACTATCGTGAGTTTCACGTAGAAATACATGCCTAAACTTT
CAATCTGTGATTAAAAGCATGAAGCAGTTATCCACTCCATATAATATCTT
GTCGGCTGTATTACTACAGTATCAgagaaaagaattttaaaagatAGTTG
GATTCTATTATTATGATATTAGAATAATTTAATATTATtaccttttcaaa
ttttatagcTTTGTGAATATATTTTCCCTGCTTCCTTTCGCTTTATTTCT
TAGCAATCCTACTATGTTTATATTATGTCCCTCATTAGGTTTTACTTTTT
CGttggatttttttcatgtcTCCCACTCCCTCacttcttttctttaaaaa
ggtATCTTTGAGCATACCACCCAACATTTTTAGAGTTTTCAGTCTTTTCC
AAGTTTCATCTCCATggttgaagatttttcaattgtttGGGATTTTGATT
TGTCACTGCCCTGACAC
Run BLAST on NCBI

transcript from alignment at sc0000181:209774..216551-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014137 ID=TCONS_00014137|Name=TCONS_00014137|organism=Clytia hemisphaerica|type=transcript|length=6778bp|location=Sequence derived from alignment at sc0000181:209774..216551- (Clytia hemisphaerica)
AATGTCTTTACGTCGTGATACGTTGTTACGCGCGCACAGTTTACCTGATG
CTAATAAACGTTCATCCAACAAGTCACACCAAGCGAAACCATCTTCGACC
GCCTCGTCGTTATNACGTTCATCCAACAAGTCACACCAAGCAAAACCATC
TTCAACCGCCTCGTCGTTATCTTCATCAACGAAATCATTGACGCCGGCCT
CTTCGACGGAAGACGTAGAGAAAAAGTTACGCCGTCGTTCTGTATTCTCC
ATTCCTTTATTCACACCTTTACGTCGAAGCTCTTCTAAAAAGAGCCGCTC
ACTCGAAGGGTCTCCGGACCCTGCACCGTCGACTTGGCGTCGTAATGAGA
AAGTTAAAAGTAAAACACCAACTGACTCACCGAAGAAATCATTATTCCAT
TTGTATAGAAACTCTTGTAGCGAGGTGTACCGATCTCCTAAACACGCTCC
GTGTAGCTCATCCGAAAAGCAGACATTTGAGCATAGTCCCTGTAAAGAGA
AAATGGTGTCTGGTAGCCAGGTTATGACGAAATCAGAATATTCTGAGCGT
AAATGGACGAACTGTCAGAAAAATAAGTCGCTGATAGGTCTAACTCACGA
GGACGTTATGAATCATATACAGAATGGGAGTATAGATTTATCTGATAATG
AACATATATACAGCAGTCAAATTTCTCTTCATTCGAGTCGGAATGGTTGC
ACCAGAGGAGACCATAGTAATGCTAGCTCTGCAGCCTCATCTCCTCGGCT
CCCGCCTAGACATGAGGCCGAACATAGGAACAATAGTTCGTACGAAAGTT
GTCCTGAGACCGGGAAACAAGATGGTGCGGACGATACTGTTTTTAAGCTA
TCGCGAAACTTTTCCTTACCTATTCGCGTCCAACATAAGTTTACGACGTC
AAATGTGGCAACAGCTAGCCCGAAAACTACTCGTAAAATGAATAATAACG
AAGATAACGAGAATACCATACAACTACGGTCTTATTCTGAGAGTTATAGT
AGCGCAAGGACACCACGGAAATTTAAAGTTTATCAAGCGAAATTTGATTC
AATGTCGAACCAAGATTACGTGCAGCTGTTATACGGAACTTTGCCTCGGG
ACGAGGCCGATCAAAATAATAATGCAGACGTTGTCTTTGTTCCCTTGAGT
TCCGCTATCTTCTCAACGGACACAACACCTATTCCTTCTACTGATACCAC
GCCCATGGGTTCGCCCTTAGATTCGCCTGGAACGCCCAATAAGAGGCACA
AACTGTTTGGTTTTTCATCTCCGAAATATCGGAAATCTCCGGCTACCTCG
CCGAAAAAATCTCCCTCAAAAACTGTTTCTCCTCGAAAATCTTCAAAATC
GTATTATGACCCAGGTGAGTTGAAGAGCGTCCGCCAGCCCGCCGTTTAAA
GATCGCGCCAACATTCCTTTTCAATTTGCAACTCCTGTATTCCTATATAT
TTATCTCTATTTATATCGGGTAAGAAAATGTCGGGGGAAAGTGACGAAGA
TTTTGAGGGGGTGACGAAATTTTCCCCCGACGAAAAAAAACCCGACTAAA
TAAAACTCCGACATTTTTTTCCCCGATCNGACGAAATTTTCCCCCGACGA
AAAAAAGACCCGACTAAATAAAACTCCGACATTTTTTTCCACGATAAGTT
ATATTTCGATTGCTTGGATAGCTGACTCAGTATTTACCTTCTTTTGTTCC
CAAATCCTCACAATGGGATACATACAGAGGGTATCAGTACCTCTCCTATA
ATAATACGGTCTTTTAAATCAAAACATTTTCCAATATTTCTCTTTGTTTA
TAAAAAGCAATACTTAACCGATCCATAGCTTGCTCATCTCATCAAATTAA
TAATATTGTTTATGAATTTATCTTTTATAGATAAAGAATCGTTGACGGGC
TTCTTGTTTGTCAGTCTTCACTATGGAAAAGGATTCGCCAAAAATTCTGG
TAGGTTTCGTTTTCTATATCATTTCACTGTTTCGAGATTTAGGACTCTAT
GTCCTCGGATGAATTGCGCAGATCAAGGCACGACATTTTTATGAATCTGA
CTCCGTTCCAACAAATAAAGATACGTTATTGGGGAAAAAGGCGTGGTTTT
AATTAGTCGGGGAAAATTTTCGTCACCTAGAGACATTATCGTCACTTTTC
CACGACATTTTCCCCCCGATAAGGTAGAAGATAAAGGGTTTTCTTCGATC
GAGTTCTTTCTCGACTGGATATTTACCAGGACAACAATCATTGAAACTAA
CTTTCTTACTTGTTTCTTACCTAGATACATACGTCATCCTTGAGATGGAC
TCGTACGGCCATTTCTTCAAGAAAGCCAAAACGAAACCATGTCGCGGCTC
AGACCCTTCCTGGGAAGAAGCTTTCGAATTCGAGATCGAAGCATGTAACA
CGTTGAAATTGACATGTTTCAATAAGTTGAGGCTGATGGGAGATGATATC
AGTGGCAAATGTACCATTAATGTGAGTCGTAGATTAGAGAGATTACTTGG
TGCCTTCGAATGTTTTTTATAGCCGACCCTCTCCTTGATTATTTAAAGGA
GAAAGAGGGTAATCTTCAGAAGGGATCTTCCTTTAGCAAATACACTATCT
TTACACTATCAGACTGAATTGGTTACTGTGGTACCTTCTCATATCATAGC
TATAGTGGTCCTCTTCTTTATTATTCGCGAGTTTATGTATGCTGTTTTTT
TCTGCTACGGGAATTGAATAGGAGAGAAGCATGAGCCCCCTAACTGCATT
TCCATATTGCATTTTTTGACCAAACTTAGTATAGGCTAAATCACATTCCT
CTCTTTTCCCAATCTTCAGTTAACTCGTGAGAAATTGACCGACAACCGTA
ACCACACACTGTCAGTCAGCTTGGATCGCGGTCAAAGTATATTGAACATT
TCGCTGTGTTTTTCCACCTCTATTGATGGTATCAAGAAATCACCCTCGTT
TTCGGATACCGGTGTTTTTGGTGTACCCATACAAGTTGTGTGCAAGTACG
ATTTTGATGTTTTTAAGAATTCCTTGTCATCACTTGGGACTGGTTTTTTT
TCTGAGATTATNTTTTGATGTTTTTAAAAAAATTCCTTGTCATTACTTGG
GACTGGGTTTTTTTTTGAGATTTTTTTTCCAGTTTCACGTAAGAAGTGCA
ATGTTATACTGTACAGTCGTCAACCCTCTCTAAATCGAACCTCTTTTATT
CGAATCTTTCTGATAATTCGAACTAACACACTGTCCTCTCATCTAGAATA
TCGTACAAAATACTCTCCGTAATCCGAATCTTTCTATAATTTGAAGAAAA
ATTTAAATCTCTTGAAAATCGAATTAGACTGACAGTAAAGTGTTATTATA
ATCTGCTTTAATAATTTTCAGTATTTCTCTCCTATCTTATTATCATATAT
TCGTTTTTCTTTTACAGACGTGAGAAGTTTGATATTCCTGTCATTGTTTT
GAGTTGCATCAAAGAGATTGAGAAACGAGGTAAAATTTATACGTTAAAAA
ATCAGCTCTCCTTCCCATCAAATCAGCTCTTATTCCCATCAAATAGCTAG
TTTACGTTTTGTTTGCAACGGTGAATTGCAATTGAAATGAACTTTCTTTC
CCCAAATTTCAGTCCAAATATTCTTATAAACTATAGGTTATAATTTAAAA
AAGCGTTTATCGTGATACTTAAGCTATATTGGCAAATTACTCGACCTTGC
ATTGAAAGCTCGCAAATTAGATTTAACAAATCTGTCAAAATAATAATATA
AATTTTGTTTTAACACATTTAGGTATGGATGAAATCGGTATCTACCGATT
GTCTGGTGTGGCATCTGAAATTCAACAACTCAAGAAATTATTCAATGAAC
GTATGTCTTTACCAGTGTTTTATTTATTTGTCAGATTAAAATGAGACATT
CGTTGAGGCCATGCGAAGTGAATCAAGTGATTTTCATGCACTGACATCCC
TTCTACTAGGATTGGGCTTTTCCAGAAAAAATTTGAATATGGGGGGTGGA
GAATTTTTGTAGATTTTCCACTACCCCCGGACACTATATCCTCCAGCCCC
ATACACTGACATTCCCTTTTAGAACTGTCTGTGTTCTTCTATTCGTTAAA
TGAACAATACTGCATCACATCAGGGTGTAATCGTTTCAAAACCAGTCCTC
GATACTTTGAAAAGCTTTATTACTTTTAAACCAATCAGCTTTTGTACTTC
ATCCTGGAACTAAGTAAATAAAAATTGTTCAAAAACCATCTTTGCTTAAC
TTTTAGAAACGCAAAATGCATTATTGGTACTAGCGGATACTGACATCCAT
GCAGTGGCTGGCTTGCTCAAATTGTACCTCAGAGAACTTCCACAATCTTT
GTTCACCAGTAAATTGTATCGAAAGTTCGTACAAGGGCTCAGTAAGTTCA
CTCTTTTAACATATGTTTTTAGATATTTAAATGTATTTAATTCATGAGTC
TTTTAAACAATAGGCAAAGCCCGAGGGAGTGGGGTGTCGTGACAATGTTC
TGACAAAAATTACGATTTCAGCATTGCACTCGTAATTGCAGGGTGCTAAT
TTGGTAAAATGTCTCCAATTTTAAGCAAACAATCGGCCCTAATGGCACGT
TTCTTTGAAAATTACTACCCATAAATCTATCAAGTCCTGTTAATTTTTCA
TAAGACATTCAAAATTTCTGAAGCCTTCGAAGTTCGAATTTTTGAGTTTT
ACACCTTAACATGTTCTTATTTTCAACATCTTGTCAGTATTTTTGACCAT
TTTCCTAAGAAATCAGTTTTTTAGAGTCCGCGAAGCCTTAAAATATTCTT
AATATTTTGACTATCAATGCTTTATGTTCTTATATAGTTTGTTCTTATTA
AAAAAACGTGTATTTCTTATCACCATTAGGCATCACAGATAGTGAAGAAA
AAGAATTGTATATGGTGGAAGTGCTTCATCAACTTCCCAAGCCAAATAAA
ATCACCACCCTCTATCTGTTCGATCATCTAAGAAGGTATTACAGATCAAT
TCTTTTCATATGTCGAAAATGATTGATATTCAAACATTTTTCTTCACCTA
TAATATGGCTGGATTCACCCCACTAGCTCATTTTTATCTTTCCCCTTCTA
AAAATGAATAATAATGCTCTACGAAAATGTCTACTTGAATTGCTTTGCTA
AGGCTTGCGTGGACCGCAATTTTTTAAGGTTAAGTCATTTTTATCAGTAT
CCATACAAGGAAATTTTTAAATAAGTCTGAATCATATTTTCTTGATAGAG
TTACGCTACTAGAAGAAACGAATAAAATGGGGACCAACAACCTGGCAACA
GTTTTCGGCCCCACCGTCCTGCGGCCGCCATCTTCAAACAGCGATAAAGA
GAATGAGACGAGCTCATGTAATGTCGGAACTTTCGATATCGGTGCATTAG
ACGTCATGTCGCAAGTTGGAATATTCCGTTATTTCCTAGGACTGAAAAAC
AATGAACGTACTAAATTACCGGCGGACGATCTAGAGCTTTGGCGGCGTTT
AGATCCTGAAAAGGCAACCAAAATGGAAGAAGATTTAATGATTACGGCTG
AAGAGCACCTGATTTGAGGAAAAAGAGTCTGGGCACGATCTTGTGAAATC
ACGTGATGGGGAAATGTCGGTCACATGTTGTAAACGTTCTCAATACGGAA
GTTGAAAATACGTCATATGGCATCTATGGATGAGTCATTTCTTGATTTCC
AAAATGAGTGCGGAATCAAGGATTTTGATTGGATGAATTGTTTACTCTTT
AGATCACCTTACAGATCTACTGCATTTTGAAGAGGATGAAATTAGGTCGT
TATTACCATTGTAAAGCTCATTATCAATGCCATCTTCTGCGCATGCTCTT
AGAAGTAATCGATAAAGTAACACACTATGAAAACCCATTTCGCCACTTAC
AGTATAGTTACAGATTTTGATTCAAGTGACGTTGCAATTTTACGCACAAA
ATGTTTTGCCGAAATATCGATTTTTTTGATAAAAGAATCTGAACGTATTT
ATTATTAGAATATATTAAAATTTCAATCATGTGTTAATTAATTTTTTTTT
TTGATGCGCACACACTTACTATCTAACTTTAAAAGAAATAGTTTTTTTGC
ATTGATATTTTCGGACAAAGTTGACTGTTACATTATTATTTCAAAGATCA
AGAAATTTGCTGTAGACAATATTTTTTCTAAAATGGATGGTTTTAGGGAT
TTTGATACTCAAAGAACTTTTAGGCGTTCGGGTGTTCCTTCTTTTTTTTT
AGTTTTAAGGCTAAAAAATGCTTAAAGAGGCACCAGGGGTAACTCTGATT
GAGGTATTGATTGTGTTTATTACTATCGTGAGTTTCACGTAGAAATACAT
GCCTAAACTTTCAATCTGTGATTAAAAGCATGAAGCAGTTATCCACTCCA
TATAATATCTTGTCGGCTGTATTACTACAGTATCAGAGAAAAGAATTTTA
AAAGATAGTTGGATTCTATTATTATGATATTAGAATAATTTAATATTATT
ACCTTTTCAAATTTTATAGCTTTGTGAATATATTTTCCCTGCTTCCTTTC
GCTTTATTTCTTAGCAATCCTACTATGTTTATATTATGTCCCTCATTAGG
TTTTACTTTTTCGTTGGATTTTTTTCATGTCTCCCACTCCCTCACTTCTT
TTCTTTAAAAAGGTATCTTTGAGCATACCACCCAACATTTTTAGAGTTTT
CAGTCTTTTCCAAGTTTCATCTCCATGGTTGAAGATTTTTCAATTGTTTG
GGATTTTGATTTGTCACTGCCCTGACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007911XLOC_007911Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014137-exon-sc0000181-1575043694:215188..216551TCONS_00014137-exon-sc0000181-1575043694:215188..216551Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:214603..214671TCONS_00014137-exon-sc0000181-1575043694:214603..214671Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:214081..214277TCONS_00014137-exon-sc0000181-1575043694:214081..214277Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:213557..213732TCONS_00014137-exon-sc0000181-1575043694:213557..213732Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:213073..213134TCONS_00014137-exon-sc0000181-1575043694:213073..213134Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:212702..212779TCONS_00014137-exon-sc0000181-1575043694:212702..212779Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:212161..212295TCONS_00014137-exon-sc0000181-1575043694:212161..212295Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:211567..211672TCONS_00014137-exon-sc0000181-1575043694:211567..211672Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1575043694:209774..211303TCONS_00014137-exon-sc0000181-1575043694:209774..211303Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:215188..216551TCONS_00014137-exon-sc0000181-1510915933:215188..216551Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:214603..214671TCONS_00014137-exon-sc0000181-1510915933:214603..214671Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:214081..214277TCONS_00014137-exon-sc0000181-1510915933:214081..214277Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:213557..213732TCONS_00014137-exon-sc0000181-1510915933:213557..213732Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:213073..213134TCONS_00014137-exon-sc0000181-1510915933:213073..213134Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:212702..212779TCONS_00014137-exon-sc0000181-1510915933:212702..212779Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:212161..212295TCONS_00014137-exon-sc0000181-1510915933:212161..212295Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:211567..211672TCONS_00014137-exon-sc0000181-1510915933:211567..211672Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1510915933:209774..211303TCONS_00014137-exon-sc0000181-1510915933:209774..211303Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:215188..216551TCONS_00014137-exon-sc0000181-1491911889:215188..216551Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:214603..214671TCONS_00014137-exon-sc0000181-1491911889:214603..214671Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:214081..214277TCONS_00014137-exon-sc0000181-1491911889:214081..214277Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:213557..213732TCONS_00014137-exon-sc0000181-1491911889:213557..213732Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:213073..213134TCONS_00014137-exon-sc0000181-1491911889:213073..213134Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:212702..212779TCONS_00014137-exon-sc0000181-1491911889:212702..212779Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:212161..212295TCONS_00014137-exon-sc0000181-1491911889:212161..212295Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:211567..211672TCONS_00014137-exon-sc0000181-1491911889:211567..211672Clytia hemisphaericaexon
TCONS_00014137-exon-sc0000181-1491911889:209774..211303TCONS_00014137-exon-sc0000181-1491911889:209774..211303Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000181supercontigsc0000181:209774..216551 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0770242	0.0218799	0.252834	0.2697	0.130072	0.0492772	0.419178	0.704435	0.76276	1.53709	0.745353	0.954064	2.42686	2.50954	0	0.0420206	6.34872	5.15359	5.40241	6.13858	9.23118	10.1589	1.70664	2.09237	3.24413	4.70498	0.367568	0.636199	1.18342	0.928934
Blast
[Close]
BLAST of TCONS_00014137 vs. Swiss-Prot (Human)
Match: ABR (Active breakpoint cluster region-related protein OS=Homo sapiens GN=ABR PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 1.606e-79
Identity = 147/351 (41.88%), Postives = 219/351 (62.39%), Query Frame = 2 
Query: 1358 DPDKESLTGFLFVSLHYGKGFAKNSDTYVILEMDSYGHFFKKAKTKPCRG-SDPSWEEAFEFEIEACNTLKLTCFNKL----------RLMGDDISGKCTINLTREKLTDNRNHTLSVSLDRGQSILNISLCFSTSIDGIKKSPSFSDTGVFGVPIQVVCKREKFDIPVIVLSCIKEIEKRGMDEIGIYRLSGVASEIQQLKKLFNEQTQNALLVLADTDIHAVAGLLKLYLRELPQSLFTSKLYRKFVQGLSITDSEEKELYMVEVLHQLPKPNKITTLYLFDHLRRVTLLEETNKMGTNNLATVFGPTVLRPPSSNSDKENETSSCNVGTFDIGALDVMSQVGIFRYFL 2377
            D +   L GFL V +H  KGF ++++ Y  LE+DS+G+F  KAKT+  R  ++P W+E FE E+E   +L++ C+ K             + D I GK  I L  + +     HT  + ++  +  +  S+ F++    +K++PS   TGVFGV I VV KRE+  +P IV  C++E+EKRG++E+GIYR+SGVA++IQ LK +F+   ++ LL+L+D DI+A+AG LKLY RELP+ L T +LY  F++G++++D   KE  M+ +L  LP PN IT L+L +HL+RV   E  NKM  +NLATVFGPT+LRP       E E+ +      DI + DVM+QV +  Y+L
Sbjct:  496 DDESPGLYGFLHVIVHSAKGFKQSANLYCTLEVDSFGYFVSKAKTRVFRDTAEPKWDEEFEIELEGSQSLRILCYEKCYDKTKVNKDNNEIVDKIMGKGQIQLDPQTVETKNWHTDVIEMNGIK--VEFSMKFTSRDMSLKRTPSKKQTGVFGVKISVVTKRERSKVPYIVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDANNKDILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRP------SEVESKAHLTSAADIWSHDVMAQVQVLLYYL 838
The following BLAST results are available for this feature:
BLAST of TCONS_00014137 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABR1.606e-7941.88Active breakpoint cluster region-related protein O... [more]
back to top