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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014255 ID=TCONS_00014255|Name=TCONS_00014255|organism=Clytia hemisphaerica|type=transcript|length=1356bp
TGTCGGTGCGCAAACTACATGTGCACTTAATAATTAATAACGGATATTTA
CAAATTGAAATTTAGAGTTACTTAAAATTAAGATTAAAAATACACTCGTT
TAACTCCTATTGCCTAAGTTTCGATAAAAAGTTTATTTGTTAAGGTTTGT
CGATACAAGATCTATCGCAGCTTTCCTCGACACTATCAGGATTAATTTTG
CCTCTTGGTAAAAATAAATTGATAGAAGTCTCTTGTTCAGCTCCTTCTGT
TGGTTTCGTGGGTACTGGTTGGTGTTTGACTTTCGTAGTGGATGTAGAAT
GACCGGCATCCGATGATGAATCTGTTGCTGTTGGTGACAAATCAAGCTTG
CCAGCGATACGATAAAACAGTCTCTTTAATGCTTGTCTGAACTTTGTACT
CATTGCTGCGTAGATCCAAAAGTCAACCATACTGTTCGAATAAGCGCCCA
ACATTGAGATAAAACTAAAGGTGTGCGAGGGCGTTCCGCCTATTTGTCCT
TCGTAAATGATCATTATGGCGTATGGGAAAAATAATAGGAAGAAACAAAG
CAGAACTAGGAGTAACATGATAGATAGCCTGACTTCGCGTTTCTTTTTCG
CAATACGATGTTTGTCACCACTGGAGGCTAGTCTTTTACTTGATTCATAG
CTATGACGTAATATTTTGTAATAACAGAAACACATTGTTGCCATGGGAAC
AGGATAAGCCATAAGTTGCAGAACAATAAGGTAACTCAAACTTTTTTGCC
AATCGATCATGCAGTGGGCGCGGTTGGCGTTGTAAGAGAAGCTACCCCAC
CCTAGCAAGGGTGGAATAGAGAGTAGAATTCCGATCCCCCAGACCAGGGC
AATACTCATAAAGAGCCGCTTGTCCGTGAATATTTTCCGGTAGCTTTTAT
TACGGACAACCAACACATAACGGTGAACTGCAATCAGCGTCAAATTAAAA
TTGGAAACTAAAAACGGGACCAGAATTAAAAACCCGAATAAATCACAGAC
CATGCCATGTGTTTGATTTCCACCCTTGATGAGATTAATCAAATGAATTG
GAATTCCGGTGACAATGATTAGCCAATCAGTAGTCGCCAAACTAATCAAT
AACCAATTAGATTTAGTGCGCATGTCCTTGTTCGTTCCAATGACCAGGAA
AATGAGAGAATTGCAGACCAGGGACACGGCTCCGATTGTGGCGTAAAGTG
TGATCTGGACCTCCACTGAGACTTCATCTTGCTCACCCATATTGCTACCT
GGAAGTTTTTATGTTGCTTTAGAAATGATGTTTCAATAAAAGatccataa
cttttaaaattttctgctTAATTATTTATTGATCTAAAAGTTTAAACGGA
ATAAAG Run BLAST on NCBI protein sequence of TCONS_00014255-protein >TCONS_00014255-protein ID=TCONS_00014255-protein|Name=TCONS_00014255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
MGEQDEVSVEVQITLYATIGAVSLVCNSLIFLVIGTNKDMRTKSNWLLIS
LATTDWLIIVTGIPIHLINLIKGGNQTHGMVCDLFGFLILVPFLVSNFNL
TLIAVHRYVLVVRNKSYRKIFTDKRLFMSIALVWGIGILLSIPPLLGWGS
FSYNANRAHCMIDWQKSLSYLIVLQLMAYPVPMATMCFCYYKILRHSYES
SKRLASSGDKHRIAKKKREVRLSIMLLLVLLCFFLLFFPYAIMIIYEGQI
GGTPSHTFSFISMLGAYSNSMVDFWIYAAMSTKFRQALKRLFYRIAGKLD
LSPTATDSSSDAGHSTSTTKVKHQPVPTKPTEGAEQETSINLFLPRGKIN
PDSVEESCDRSCIDKP Run BLAST on NCBI transcript from alignment at sc0000183:55920..57275 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014255 ID=TCONS_00014255|Name=TCONS_00014255|organism=Clytia hemisphaerica|type=transcript|length=1356bp|location=Sequence derived from alignment at sc0000183:55920..57275 (Clytia hemisphaerica)
CTTTATTCCGTTTAAACTTTTAGATCAATAAATAATTAagcagaaaattt
taaaagttatggatCTTTTATTGAAACATCATTTCTAAAGCAACATAAAA
ACTTCCAGGTAGCAATATGGGTGAGCAAGATGAAGTCTCAGTGGAGGTCC
AGATCACACTTTACGCCACAATCGGAGCCGTGTCCCTGGTCTGCAATTCT
CTCATTTTCCTGGTCATTGGAACGAACAAGGACATGCGCACTAAATCTAA
TTGGTTATTGATTAGTTTGGCGACTACTGATTGGCTAATCATTGTCACCG
GAATTCCAATTCATTTGATTAATCTCATCAAGGGTGGAAATCAAACACAT
GGCATGGTCTGTGATTTATTCGGGTTTTTAATTCTGGTCCCGTTTTTAGT
TTCCAATTTTAATTTGACGCTGATTGCAGTTCACCGTTATGTGTTGGTTG
TCCGTAATAAAAGCTACCGGAAAATATTCACGGACAAGCGGCTCTTTATG
AGTATTGCCCTGGTCTGGGGGATCGGAATTCTACTCTCTATTCCACCCTT
GCTAGGGTGGGGTAGCTTCTCTTACAACGCCAACCGCGCCCACTGCATGA
TCGATTGGCAAAAAAGTTTGAGTTACCTTATTGTTCTGCAACTTATGGCT
TATCCTGTTCCCATGGCAACAATGTGTTTCTGTTATTACAAAATATTACG
TCATAGCTATGAATCAAGTAAAAGACTAGCCTCCAGTGGTGACAAACATC
GTATTGCGAAAAAGAAACGCGAAGTCAGGCTATCTATCATGTTACTCCTA
GTTCTGCTTTGTTTCTTCCTATTATTTTTCCCATACGCCATAATGATCAT
TTACGAAGGACAAATAGGCGGAACGCCCTCGCACACCTTTAGTTTTATCT
CAATGTTGGGCGCTTATTCGAACAGTATGGTTGACTTTTGGATCTACGCA
GCAATGAGTACAAAGTTCAGACAAGCATTAAAGAGACTGTTTTATCGTAT
CGCTGGCAAGCTTGATTTGTCACCAACAGCAACAGATTCATCATCGGATG
CCGGTCATTCTACATCCACTACGAAAGTCAAACACCAACCAGTACCCACG
AAACCAACAGAAGGAGCTGAACAAGAGACTTCTATCAATTTATTTTTACC
AAGAGGCAAAATTAATCCTGATAGTGTCGAGGAAAGCTGCGATAGATCTT
GTATCGACAAACCTTAACAAATAAACTTTTTATCGAAACTTAGGCAATAG
GAGTTAAACGAGTGTATTTTTAATCTTAATTTTAAGTAACTCTAAATTTC
AATTTGTAAATATCCGTTATTAATTATTAAGTGCACATGTAGTTTGCGCA
CCGACA Coding sequence (CDS) from alignment at sc0000183:55920..57275 >TCONS_00014255 ID=TCONS_00014255|Name=TCONS_00014255|organism=Clytia hemisphaerica|type=CDS|length=1101bp|location=Sequence derived from alignment at sc0000183:55920..57275 (Clytia hemisphaerica)
ATGGGTGAGCAAGATGAAGTCTCAGTGGAGGTCCAGATCACACTTTACGC
CACAATCGGAGCCGTGTCCCTGGTCTGCAATTCTCTCATTTTCCTGGTCA
TTGGAACGAACAAGGACATGCGCACTAAATCTAATTGGTTATTGATTAGT
TTGGCGACTACTGATTGGCTAATCATTGTCACCGGAATTCCAATTCATTT
GATTAATCTCATCAAGGGTGGAAATCAAACACATGGCATGGTCTGTGATT
TATTCGGGTTTTTAATTCTGGTCCCGTTTTTAGTTTCCAATTTTAATTTG
ACGCTGATTGCAGTTCACCGTTATGTGTTGGTTGTCCGTAATAAAAGCTA
CCGGAAAATATTCACGGACAAGCGGCTCTTTATGAGTATTGCCCTGGTCT
GGGGGATCGGAATTCTACTCTCTATTCCACCCTTGCTAGGGTGGGGTAGC
TTCTCTTACAACGCCAACCGCGCCCACTGCATGATCGATTGGCAAAAAAG
TTTGAGTTACCTTATTGTTCTGCAACTTATGGCTTATCCTGTTCCCATGG
CAACAATGTGTTTCTGTTATTACAAAATATTACGTCATAGCTATGAATCA
AGTAAAAGACTAGCCTCCAGTGGTGACAAACATCGTATTGCGAAAAAGAA
ACGCGAAGTCAGGCTATCTATCATGTTACTCCTAGTTCTGCTTTGTTTCT
TCCTATTATTTTTCCCATACGCCATAATGATCATTTACGAAGGACAAATA
GGCGGAACGCCCTCGCACACCTTTAGTTTTATCTCAATGTTGGGCGCTTA
TTCGAACAGTATGGTTGACTTTTGGATCTACGCAGCAATGAGTACAAAGT
TCAGACAAGCATTAAAGAGACTGTTTTATCGTATCGCTGGCAAGCTTGAT
TTGTCACCAACAGCAACAGATTCATCATCGGATGCCGGTCATTCTACATC
CACTACGAAAGTCAAACACCAACCAGTACCCACGAAACCAACAGAAGGAG
CTGAACAAGAGACTTCTATCAATTTATTTTTACCAAGAGGCAAAATTAAT
CCTGATAGTGTCGAGGAAAGCTGCGATAGATCTTGTATCGACAAACCTTA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014255-exon-sc0000183-1491911889:55920..57275 | TCONS_00014255-exon-sc0000183-1491911889:55920..57275 | Clytia hemisphaerica | exon |
| TCONS_00014255-exon-sc0000183-1510915933:55920..57275 | TCONS_00014255-exon-sc0000183-1510915933:55920..57275 | Clytia hemisphaerica | exon |
| TCONS_00014255-exon-sc0000183-1575043694:55920..57275 | TCONS_00014255-exon-sc0000183-1575043694:55920..57275 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:55920..57275 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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