TCONS_00014603 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014603
Unique NameTCONS_00014603
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2685

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014603 ID=TCONS_00014603|Name=TCONS_00014603|organism=Clytia hemisphaerica|type=transcript|length=2685bp
GTTTGCTTGAAGATAGTCCATAACTGGATTTTGCCAGATCGGTCTATAGA
TTATTTCCGATGGTACTTCAATTGGTTTACAAGATTGAAAaatggttgac
aatagatcATGATGTATATTTATGTGCCATGCTGTAGTAGGAAAGAGAAA
AGAGGAATCATGCTTTCATGTGTCAAAACCAAGATCTGCTTGATGATTGG
TTGGTTTTGTTTTCTGTCGTAATATTCAAAATGGCGTCGTCGTGCCGCTT
GCGTAAGCAGAGAAAATCTGAAGCAGTGGGCTGACATTCGACGTGCCATG
AAGAAGAATAAGAAGGAGGACATTATGGAGATATTATGACATATCATGCT
ACCTGCATTCAGCAAGGAGTATACCATATTTTAAGCAAAGAGATGAGTTG
TAAGATACCAGtcattttgtagttttttttgCCTCAGGAAAATGGTTGAA
TTCGTTGTATCGGAGTGTCCAACAGTACCGCTGACAAAAACTCAACACGG
ACATGCTGTAATTAGTAAAGACACTTTAGATATCAAAACAAGGCAAGATC
CAGCGATTTTACCTCTAAAGTCATGCATCCAAATACCAAATCCTGATGGA
AGTGGAGAAAAGCTTAATATAAAGAAGGCGAAAAGTGTACATTTTGCTGA
TAGCTTGGGTAAACCTTTAAAGTCGGTTAAGACCTTATGTGATCTTGAGG
ATGATCTGGATTTACTTTTCCTTGGTTTGAAAACAAACTACAGTTCTACC
CGAAGAAGTTTTCCTGTAAGAGATAAGAAAACATCCCAGAAGTTTGACTT
TGTCAATTTTAAACCACCAATTACTGAACCAAACTTTCTAGAGCGTGTTc
aaaaggaaaatgttttattggaaAACATCTTTGTTAAAGACAACAAAGTT
CTTGGCACTGTGaatgtgaaaaatatttccttcgaGAAAGATGTATCAAT
CACTTATACATTAAATGACTGGGAAACTGTGCAAAATGCCAGAGGAAAAT
ATGTTCCCGGATCCAGCACTGGGACGATTGAtatcttttcttttgaaatt
acCTTTCCTGAAGACACTGCTTGCAATATCAAATTCGCAATTTGTTACAA
AGCAgccaaaaaagaattttgggaTTCTaatgaatctaaaaattatatCT
TGGCAATCAAAACCAAATCTCCAAAGAAGAAACTAATAGATGATTCTGAC
AATTTTAATGGGTTTATTATTTCCAAACAAAACTTTATTGGCTGGGCATC
ATAACACAATGAAATGATTAGGTGACATTAAAACTGATATAATCACAATG
TTTGTCTTTAATTTGATCTTATTTAGGTAATGGACATAAGTTTTATCCTT
TTTGGATACAGTAGATAATAAAAAGACTTGATTTtataaatctgaaaaaa
agaagtagcaggccatttttcatgccctttaagcatccggttatcggacg
ctgcccctcttgaaattacttaaatattggtaaaaacagcctttttagta
gaaaaacactggaaaaagtgCGTTTTGTTCTGTCCAAAGACCACTTTAAA
TGTATTCAGAATTTATGTTATTGTTATATTGTTATGTGGTATctttcaag
atttttcgatAATTTGTTATAGTGAAGTCTGTTAGCACATAAAAatgtaa
gaatacttcagatggtgataaaagcatgaaaattGGCACCGATGATCctt
agattttaattttaaacagtaacaccaaattctGCCACCTGGCTACCTGC
CAGATGACATCATCAGGTGGCtcggcaaaaaattatttttttgaaaatat
tcaacatCTGATGGTTCCAGCAGAAacagcatgaaatgctgatgaaaatt
gaggtataaaacataccttgaaaatcttcctatcaaaagttatgaaggtt
ttgaaagttttgtgatgacctCATCAAAAGCCTTTTTAGGCAAAACTTAA
ACACCTcctatttttttaacaaattcaccaaatttgatttgatttgatgt
aTTTAGTATTCTTGTCCTaactaacagacctcactattaGTATGCACAGA
AATATGATACCATGTTTTTGTTAccaatttttaatttgttttttttttct
ttatattttgacTGGAAATGTATGacattaatttttttccaattatCCAC
TTGATTAGTTTTGTATTACaatcttttttaattatttcattttgacaATT
ATTTCAATTTGACAATTATTTCATTTGACCGATTAATCAGTTTTTTTCCA
GAAATTTATACTCGAAAACTTcttaaaaaaagatatatttattgaatttt
tttagacttttttattttagtatcaTCAACGAATTATTTCATATCATAGT
ATTTAGATAATTATAAGGTTTGTGCACATAGTATATGATATGGTTCTTAT
AGGAGTGAGaagatttttgttttagaaaataaCATATTTCATATTACAAT
CATAAGTTATATCCACCTTGTATTGTTTACCACAATAGACCTGTCTTCTT
TTTGGAATTGATTTGTTATGTTGTTTGCTTTAGATAGTTTGAATGTGCAT
TATTGCATATTTTCACTCGAAACTGAATGCTGCTTTTATTGtttgacttt
taaaaaataGTATCAAATTACCTTTTTCTGTATTTGCCACTTCTTGTATC
CTGTAATCCTAGTATGCactcttattttctttttt
Run BLAST on NCBI

protein sequence of TCONS_00014603-protein

>TCONS_00014603-protein ID=TCONS_00014603-protein|Name=TCONS_00014603-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MVEFVVSECPTVPLTKTQHGHAVISKDTLDIKTRQDPAILPLKSCIQIPN
PDGSGEKLNIKKAKSVHFADSLGKPLKSVKTLCDLEDDLDLLFLGLKTNY
SSTRRSFPVRDKKTSQKFDFVNFKPPITEPNFLERVQKENVLLENIFVKD
NKVLGTVNVKNISFEKDVSITYTLNDWETVQNARGKYVPGSSTGTIDIFS
FEITFPEDTACNIKFAICYKAAKKEFWDSNESKNYILAIKTKSPKKKLID
DSDNFNGFIISKQNFIGWAS
Run BLAST on NCBI

transcript from alignment at sc0000190:274764..281724-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014603 ID=TCONS_00014603|Name=TCONS_00014603|organism=Clytia hemisphaerica|type=transcript|length=6961bp|location=Sequence derived from alignment at sc0000190:274764..281724- (Clytia hemisphaerica)
GTTTGCTTGAAGATAGTCCATAACTGGATTTTGCCAGATCGGTCTATAGG
TAATAACTCTTTATAAGCAAAAATAAATTGTATTAAAAAGAAAGTCTTCA
TTCATTGACCCCCACATTTTTCTTTGCATAATTTCTACCGGAAATCGAAA
GTAATTTCATTTGACTTGTGATGTTAGAGAGCTTGGTTGTTGGGAAGCTG
CAAGAATTTAAAGGTAAACAAATTTCTTTGTGAAAGAAAAATGAACGTTC
TGCTAGCCTTGTACATAAACACAGCAAAACACTGGGCCGTTTACTTTAAA
TTTCTGATAAATTTAATTTCTGCCAAATCGATATTATCCCGATTATCCCT
GTTCTCTTCTCAGATTATTTCCGATGGTACTTCAATTGGTTTACAAGATT
GAAAAATGGTTGACAATAGATCATGATGTATATTTATGTGCCATGCTGTA
GTAGGAAAGAGAAAAGAGGTAAGTCTAGCCTAGGCTAATTGGGCTCTTCC
AGAAAAAAATTGATATAGGGGTAGGCTGACAGGGATTTTCAGATAAAAAA
AGCACTCGGAAATCCAGTCAATTTTTTAAAGTGCTTCGGAAATTCCGCTT
TATTTTTTATTTGAGCCATTGGAAATTCCACATAATTTGTCAAAATCTTG
AAAAAAATATTGGAATTCCCAGATTTTTTCACCAAAAAATTGATTTTGAA
TACACCGTTTAGGAGTCTCGCCATTTCACGGTACTCCATTGCAGAGGCCC
GGTAAAAATGGTAGGTAAAAATGCGCACTTTAGTACTGTGAAAGGTTANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGTTTTTTTACGGAGGAGAGTGAATTTTCCGTGATCGCTAA
AATCAAAACAATGGAAAATTGGATTGACACGTGCGCAGTCGACACTCCTA
AACGGTGTATTGATGGAAATTTGATAAGCAGCTGCAAAGGAGCACTGGGA
AGCAATCAGTAGAATAGACCACTTTCGTTTTTGTTGCAGATTTCTATAAA
ACTTCTCTCAGGGATTACTTGTCAATGTACATGTACACATGTGTTGTGTC
AACTTGTCAGCATTGTATTGTTGTAAAGGAAAAGATAAAAGAGGTAAGAC
TAGCCTAGTTTCTAATCCTGATATAGGAGTTTAAGTTTAGACTGTCAAAG
CCTCATGCAACTCAACCAAATAGAAATAGAAATAGAAAACAGAAAACTGT
CAAAAGAATATGAGAGCTGATACAAACAAAACACATGGTGTTTCCCAAGA
AAATCAATTGAAGAAAATCAACAGTAAGTAAATAAATACATCGAAAACAG
AATATTTAGCTTACAAAGACAAAAGAGAACCAGCCCACCAATGAAGAACT
CTGGTCTACATACCACCGTCACTGAGCACCGTGCAGTCGGGTAACTTGCA
TCAGTGCAGTGAGTGGAGGCTAACATGCATAGCCTTCAAATGAATGACCC
TGGATGGCATGGCCCATGCCATGGCGGGCTGCGGTCCTTAAAATACAAAG
TTAAATAAAAATAAAAATGCTAGAGTAGAGCTGCGAGCGCAGCTACATAG
TTCATTTGTTTTGACAATTTCTTGCTTTGGCATTTTTGGTTGGTCAGTTA
TTTGAGATGCATGTTAGCCTCCACTGATGCAAGTTAACTAACTTCACAGT
ATCTAATTAATAGCTTCATTATAAAACTGAAAGGCAGTATCATACATGTC
TAAAAAGTTCATAATAAAGCACTTTACAAGTTGGATGAGCTCATGAAACA
AAAGCTGTAATAGGTAAGTACTTACAAAGATTCAATAACCTTTTTAAAAA
AAAGTGCTGGTGTAGTTCATTCACTCGGTATAATGCGCCATGCGCTCCCG
CTAAAATCTTTCACGGCTTTATCTACCATTTTGGATTATAGATTACTTTT
GTTTTCGGAATTTCCGAGGTAACGGGGTGCGAGGGTGCGAGGGGGTGCGA
CCAATGAAGTATAAGCCCGAAGGGCTAGTAGTCAATCTCTTTGGTAGGAT
TTGAAGCCAACAAATCCTATCAAAGTTGCGCGGCCTTGAACGACCCGCCT
GGTTTTTACACAAATGACAGATTGAAACTAAAATTTACCGCTTAATTTCG
AAAAATATATCACTCGAAAACAAAGGAATTGCTATATTCAATCCGTCATC
AAAAATACGGCGCATATTTTAAGCTTAAGGCTTCAATTTTTCTTGCCTGA
GAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTTGAAACTCAATGGGT
GCGACACGACAGGAGAGGCAAAGGAGGGGTAAATAAACTATCTGTGTCCC
TCACAGTCCCCGGGGGGGGGGCACTCGATCTGAAAACGACCATCCGTTCG
GCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCGTACGGTATTTCGGAA
TTGCGGAAATTGACCCTTTTTTCTTCGGAATTTCGGAAATCGGGCAAAAT
TCCTTCGTTCGGTATTTCGGAATTCTGAAATTGTTTCGGTATCGGAAATC
CATGACATTTTGCTTCGAAATTTCGGTATTATAAATTTTTTATCCCCCTT
TTTCGGTATTCATGCATGAAAAATCAAATTTGATGAAAAATTAGTCAAAA
CGAGGAAAAATACCCAAAAAATCGATATCGGAATTGTAAGTATTATTTTA
CGGAATTTCGGAAATTTTGGCAAAATTATTCGGTATTTCGGAAATTGCAT
ACCCCGTACGCCCCCCCCCCCTGAAAATGCATGAATTTCCAAGGTAATTG
AATTAAAAAAGACAAAAAAGAGTGGAATTTCCGATGCATTTTGCAAAAGT
ACATGGATTTTTATCGGAATTTCCGACCACTACTGGAAAAGAAAAATTAT
TTCCGAGGCTAGAAAAAATTAAAAAATGCACGTCGTCCGCCGACGGGGGG
TAACAAAAATTTTCTGGAATGGCCCATACGTTCGGCCCAAAATTTGGCTT
CCAACACCCTTACAGTGCAGTGAATTTCCTTGAAAAATCATACCCTTACA
GTGCATTTTTTCAAAATTTGTCGCCTGTAAGGGCGACAATTTTTGCACAA
GAAAGTGTGGAATTTTTCCTCCAAAATTGATCAATTTTGTGCCAATTTTA
CCAAAAAATTGGCCTTTTATCACGATTTCCTACCCTTACAGTGCAGTTCA
GTGCACAGTTTTTGTAATTTCCTACCCTTACAGTGCACTAGCTGAACTAT
GAAAAACCTACCCTTAAGGGCCGAACGTCTGGTAAGTCATTTACCTTGAG
TGCCCCCCCCCCCCGGGCCCACAGTGTCCTGGGAAAAAAGAGGGGGTACT
TAAAGAACAAGGGCAGTAGAAAAGTCTAAATATATAATAGAGATATTAGA
GATGATGTTGTTCGAAGAAGACACTTTTGTTGATAAAGTGTCGAAATATA
TCAGTTTTTAATTATCCTTTTTGGCCATCGAAGTTTTATGCAATGTTCTT
ATTTAGTTCTTATGAAAAAACGTGTACTTTCATCACATTTATTTACCGCC
ATGCTAAATTTGAGATTACCCATTTCTATTATATGGCTATTATCATGCTT
CCCGTTCGAAATTGACCCTTGACCCCCATGGGTTTTCAAAGTCTATCATT
GTTCGCAATTAACTTTTTGATCACGTTTAGGAATCATGCTTTCATGTGTC
AAAACCAAGATCTGCTTGATGATTGGTTGGTTTTGTTTTCTGTCGTAATA
TTCAAAATGGCGTCGTCGTGCCGCTTGCGTAAGCAGAGAAAATCTGAAGC
AGTGGGCTGACATTCGACGTGCCATGAAGAAGAATAAGAAGGAGGACATT
ATGGAGATATTATGACATATCATGCTACCTGCATTCAGCAAGGAGTATAC
CATATTTTAAGCAAAGAGATGAGTTGTAAGATACCAGTCATTTTGTAGTT
TTTTTTGCCTCAGGAAAATGGTTGAATTCGTTGTATCGGAGTGTCCAACA
GTACCGCTGACAAAAACTCAACACGGACATGCTGTAATTAGTAAAGACAC
TTTAGATATCAAAACAAGGCAAGATCCAGCGATTTTACCTCTAAAGTCAT
GCATCCAAATACCAAATCCTGATGGAAGTGGAGAAAAGCTTAATATAAAG
AAGGCGAAAAGTGTACATTTTGCTGATAGCTTGGGTAAACCTTTAAAGTC
GGTTAAGACCTTATGTGATCTTGAGGATGATCTGGATTTACTTTTCCTTG
GTTTGAAAACAAACTACAGTTCTACCCGAAGAAGTTTTCCTGTAAGAGAT
AAGAAAACATCCCAGAAGTTTGACTTTGTCAATTTTAAACCACCAATTAC
TGAACCAAACTTTCTAGAGCGTGTTCAAAAGGAAAATGTTTTATTGGAAA
ACATCTTTGTTAAAGACAACAAAGTTCTTGGCACTGTGAATGTGAAAAAT
ATTTCCTTCGAGAAAGATGTATCAATCACTTATACATTAAATGACTGGGA
AACTGTGCAAAATGCCAGAGGAAAATATGTTCCCGGATCCAGCACTGGGA
CGATTGATATCTTTTCTTTTGAAATTACCTTTCCTGAAGACACTGCTTGC
AATATCAAATTCGCAATTTGTTACAAAGCAGCCAAAAAAGAATTTTGGGA
TTCTAATGAATCTAAAAATTATATCTTGGCAATCAAAACCAAATCTCCAA
AGAAGAAACTAATAGATGATTCTGACAATTTTAATGGGTTTATTATTTCC
AAACAAAACTTTATTGGCTGGGCATCATAACACAATGAAATGATTAGGTG
ACATTAAAACTGATATAATCACAATGTTTGTCTTTAATTTGATCTTATTT
AGGTAATGGACATAAGTTTTATCCTTTTTGGATACAGTAGATAATAAAAA
GACTTGATTTTATAAATCTGAAAAAAAGAAGTAGCAGGCCATTTTTCATG
CCCTTTAAGCATCCGGTTATCGGACGCTGCCCCTCTTGAAATTACTTAAA
TATTGGTAAAAACAGCCTTTTTAGTAGAAAAACACTGGAAAAAGTGCGTT
TTGTTCTGTCCAAAGACCACTTTAAATGTATTCAGAATTTATGTTATTGT
TATATTGTTATGTGGTATCTTTCAAGATTTTTCGATAATTTGTTATAGTG
AAGTCTGTTAGCACATAAAAATGTAAGAATACTTCAGATGGTGATAAAAG
CATGAAAATTGGCACCGATGATCCTTAGATTTTAATTTTAAACAGTAACA
CCAAATTCTGCCACCTGGCTACCTGCCAGATGACATCATCAGGTGGCTCG
GCAAAAAATTATTTTTTTGAAAATATTCAACATCTGATGGTTCCAGCAGA
AACAGCATGAAATGCTGATGAAAATTGAGGTATAAAACATACCTTGAAAA
TCTTCCTATCAAAAGTTATGAAGGTTTTGAAAGTTTTGTGATGACCTCAT
CAAAAGCCTTTTTAGGCAAAACTTAAACACCTCCTATTTTTTTAACAAAT
TCACCAAATTTGATTTGATTTGATGTATTTAGTATTCTTGTCCTAACTAA
CAGACCTCACTATTAGTATGCACAGAAATATGATACCATGTTTTTGTTAC
CAATTTTTAATTTGTTTTTTTTTTCTTTATATTTTGACTGGAAATGTATG
ACATTAATTTTTTTCCAATTATCCACTTGATTAGTTTTGTATTACAATCT
TTTTTAATTATTTCATTTTGACAATTATTTCAATTTGACAATTATTTCAT
TTGACCGATTAATCAGTTTTTTTCCAGAAATTTATACTCGAAAACTTCTT
AAAAAAAGATATATTTATTGAATTTTTTTAGACTTTTTTATTTTAGTATC
ATCAACGAATTATTTCATATCATAGTATTTAGATAATTATAAGGTTTGTG
CACATAGTATATGATATGGTTCTTATAGGAGTGAGAAGATTTTTGTTTTA
GAAAATAACATATTTCATATTACAATCATAAGTTATATCCACCTTGTATT
GTTTACCACAATAGACCTGTCTTCTTTTTGGAATTGATTTGTTATGTTGT
TTGCTTTAGATAGTTTGAATGTGCATTATTGCATATTTTCACTCGAAACT
GAATGCTGCTTTTATTGTTTGACTTTTAAAAAATAGTATCAAATTACCTT
TTTCTGTATTTGCCACTTCTTGTATCCTGTAATCCTAGTATGCACTCTTA
TTTTCTTTTTT

Coding sequence (CDS) from alignment at sc0000190:274764..281724-

>TCONS_00014603 ID=TCONS_00014603|Name=TCONS_00014603|organism=Clytia hemisphaerica|type=CDS|length=813bp|location=Sequence derived from alignment at sc0000190:274764..281724- (Clytia hemisphaerica)
ATGGTTGAATTCGTTGTATCGGAGTGTCCAACAGTACCGCTGACAAAAAC
TCAACACGGACATGCTGTAATTAGTAAAGACACTTTAGATATCAAAACAA
GGCAAGATCCAGCGATTTTACCTCTAAAGTCATGCATCCAAATACCAAAT
CCTGATGGAAGTGGAGAAAAGCTTAATATAAAGAAGGCGAAAAGTGTACA
TTTTGCTGATAGCTTGGGTAAACCTTTAAAGTCGGTTAAGACCTTATGTG
ATCTTGAGGATGATCTGGATTTACTTTTCCTTGGTTTGAAAACAAACTAC
AGTTCTACCCGAAGAAGTTTTCCTGTAAGAGATAAGAAAACATCCCAGAA
GTTTGACTTTGTCAATTTTAAACCACCAATTACTGAACCAAACTTTCTAG
AGCGTGTTCAAAAGGAAAATGTTTTATTGGAAAACATCTTTGTTAAAGAC
AACAAAGTTCTTGGCACTGTGAATGTGAAAAATATTTCCTTCGAGAAAGA
TGTATCAATCACTTATACATTAAATGACTGGGAAACTGTGCAAAATGCCA
GAGGAAAATATGTTCCCGGATCCAGCACTGGGACGATTGATATCTTTTCT
TTTGAAATTACCTTTCCTGAAGACACTGCTTGCAATATCAAATTCGCAAT
TTGTTACAAAGCAGCCAAAAAAGAATTTTGGGATTCTAATGAATCTAAAA
ATTATATCTTGGCAATCAAAACCAAATCTCCAAAGAAGAAACTAATAGAT
GATTCTGACAATTTTAATGGGTTTATTATTTCCAAACAAAACTTTATTGG
CTGGGCATCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008169XLOC_008169Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014603-exon-sc0000190-1575043694:281676..281724TCONS_00014603-exon-sc0000190-1575043694:281676..281724Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1575043694:281257..281361TCONS_00014603-exon-sc0000190-1575043694:281257..281361Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1575043694:274764..277294TCONS_00014603-exon-sc0000190-1575043694:274764..277294Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1510915933:281676..281724TCONS_00014603-exon-sc0000190-1510915933:281676..281724Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1510915933:281257..281361TCONS_00014603-exon-sc0000190-1510915933:281257..281361Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1510915933:274764..277294TCONS_00014603-exon-sc0000190-1510915933:274764..277294Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1491911889:281676..281724TCONS_00014603-exon-sc0000190-1491911889:281676..281724Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1491911889:281257..281361TCONS_00014603-exon-sc0000190-1491911889:281257..281361Clytia hemisphaericaexon
TCONS_00014603-exon-sc0000190-1491911889:274764..277294TCONS_00014603-exon-sc0000190-1491911889:274764..277294Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014603-proteinTCONS_00014603-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:274764..281724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.268189	0	0	0	1.75845	0	0.662041	0	1.7224	0	0.915813	0.182908	0	2.18633	2.01108	1.03229	2.11612	3.2158	1.52964	1.32953	0.778198	0.315334	1.14674	1.77167	1.31764	0	0	0.597336	0.933011
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR005036CBM21_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00014603 vs. Swiss-Prot (Human)
Match: PPR3D (Protein phosphatase 1 regulatory subunit 3D OS=Homo sapiens GN=PPP1R3D PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.808e-21
Identity = 63/220 (28.64%), Postives = 103/220 (46.82%), Query Frame = 1 
Query:  541 RQDPAILPLKSCIQIPNPDGSGEKLNIKKAKSVHFADSLGKPLKSVKTXXXXXXXXXXXXXXXKTNYSSTRRSFPVRDKKTSQKFDFV------NFKPPITEPNFLERVQKENVLLENIFVKDNKVLGTVNVKNISFEKDVSITYTLNDWETVQNARGKY-VPGSSTGTIDIFSFEITFPE---DTACNIKFAICYKAAKKEFWDSNESKNYILAIKTKS 1170
            RQ  A  P  +C       G  +KL ++      FAD+LG  L  VK     +D    L +  +   +S           +SQ  +F       +F PP+   +F ER+Q++ V LE +   D  + GTV V N++FEK V++ YT + W +   A  ++  P    GT D+F+F    P    +    + FA+ Y+ A  E+WD+N+ ++Y L  +  +
Sbjct:   82 RQKAAGAPGAACRP-----GCSQKLRVR------FADALGLELAQVKVFNAGDDPSVPLHVLSRLAINSDLCC-------SSQDLEFTLHCLVPDFPPPVEAADFGERLQRQLVCLERVTCSDLGISGTVRVCNVAFEKQVAVRYTFSGWRSTHEAVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRYQVAGAEYWDNNDHRDYSLTCRNHA 283
The following BLAST results are available for this feature:
BLAST of TCONS_00014603 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPR3D3.808e-2128.64Protein phosphatase 1 regulatory subunit 3D OS=Hom... [more]
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