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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014642 ID=TCONS_00014642|Name=TCONS_00014642|organism=Clytia hemisphaerica|type=transcript|length=2917bp
GTGGAGGATATGTTTTCTACTCTATTTGTACTAAGACCTTCTGACTACCC
ATAATTACCAAGTGTAGCTGACACATTTaccagattttaaaattttaaaa
gcttATTAAGTTTTCTAGAATCAATAATTTTTGGTAAGAATCGGGTTTTT
TATTTCTAAGTTAGATTAGATTTAGAGTCTTATAGTTCGCATCTGTCAAG
TCGCAGTGCCTGTCTgcgccgtgattcctactccttcggGAGTAGAACCC
ATTCTGAAAgcattcggagggctcatatctataTCTATAATTGCTCTAGT
TAAAAAATAGTGTAAAATGTTCCATGTTGAGTCGAGAAATAATTGTTTGG
TTATTATTTAGCATAAAATAATGAAGAGAGGGAAGGATCTTTCTTATCAA
TTCAAACTGAAATATAATATCACCTGTCCTTcatatcaactttttttgtt
ttgtgacTCTTATACTGCTCAGAATGTCTATTTATTTTGCTGGTATATTG
GTACAATGATATTGGAGAAGAATATGAAAAATCACTCCATAGAATTTGAA
TCATTTGTTGATTGTTTGTTTTGGAGTTCAGGTTGAAAATCAAACGAACA
GGAAGCCAAGATTGAGAAGCTAGGgttctttacttttttaaacCTCATTA
CTGGATTGGTCATTAGCATAGAACCATAGCTATACTGTGATCGGCCTGCT
ATATTGTGATCGGAGTAAATACTTCACTTGAATgcgcgtttttttataag
aacaaactaaataagaacataagccttcgatagccaaaatcttataaaca
agttaagaacattttaaggctttgtggactctaaaacacccaatttctta
ggaaaatggaccaaaatactcataaaatggtgtaattaagaacatgttaa
gaagatttttaggcttaaaactcaaaaagttaagaacatttgaaggcttc
aaaaattttggatgttcttatagaaatcGTGTACTACGAGAAATGGACAA
GCTTCGAGTTGATTAGAGTAAAATCTtcctacacccctgtctcggtgACC
ATTAGTATAGTAGGAAGTTTATAATTCATCAGTCTATGAAGGGTATTTAA
AGTTGACAAAGTTCAACGGGGATTTTAAACCAAGATCAACCATAATTTGT
CATTATTTATCATCATTCTTCAATTTATACTTTGTGTAAGCCAAAACCAA
TAACAGTGCCCAATGTTAATGATAACAGAGTTTTATACTTGTTTGAGTAA
AGAGAAcgatttaagttaatttcatactcaaagtttcttGCTATCCACGc
aggatggcaatcttcagtgaaaatCTTAAACCATTCTTCAATTTATTTTA
GCTATAATGGGATATATAAAAGAATCAGCAATGAACTGTACAGAAATTGT
TTTCACGAAAACAGACACGTACCGCACCATACAAATCGTcgttttgacat
ttttcttgTCCATCGTCATGCTTaataacattttggccatctaTGCAACC
CAAAAATCAATATCAACGAAATATTGTATTTTTGCTCAACTTTACAATAT
TTCATACATCAGTAACATCATGGCTGCTTTTTCATTGTACGGTGGCAGTT
TGTTTATAACCGATTACCATGGCGACGCATTCGGCTGCCGGCAATTACCA
CTTGATCGATATTTCTTTTTATGTTTTGGAATGTCGAATAACGTTTTGGT
TTTGTTGCTAAATACTTATTTAAGACGTAAATCGTTGATGGATCCTCTCG
CAAGTTGTGATGTGCCAAGAAGCAAATGGAAAGCTGTCCTAAAGTTCCTC
GTCCCATTCTTCCTAGTCTCGTTAACGCTGTCAGCGATGAATATTGTATT
CCAATATGAAGTCCAAATGAATTTCTACATTGGAGTTGCAGTTGGGTTTT
ACGTACCTGTCATGATAGTTGTTATCGTGTTAAATATACACCTTACATAC
TTCCTAAACGAAAGTAAAAAGATTGCCGAAAATATTAATCAACAATCGTC
GCGTAACCTAATGAAAGCTCGTAAAATATTATTAATGATCGTTAAACTAC
AATCTTTTTATACCTTTTTATGGATTATCTTGGTCATTTTGATGCATACC
ATTGGTGTAAAGAACGAAATcaattttgttattcttgaaTGGCTTATGCG
TGTAGTATACGGGCTAAGTTTTGTATTAGAGGCTAAAATTTTAATCCGCC
GTGACAAAGTAGTTCAAAAGGTACTTCTGAAAGCATTTCGTAAAATGTCG
AAATTTTCGAGGGATGTTTCGTCAACGATCAGTCGTTCAGCCACAAGAAG
CAGTCAAAGCAGTAAAAGTAAACAGAAAACTGAACCAAGCAGCATTGAAA
TTCATATGGATCCGGTGGTTTTAGGATCTACTTCTTCATAAAGAACCCTA
AAAACTTTGTAAACTACTTATCAGACAATACTTTCGTCCATTAGAGGgac
agtaaacgcgggaaataTATATGCGCAGATTTTACAGCCATCACGGCGGT
ATACgggagaaaaacaaaaatagtgGTGGTAGAGGTTGGAACAAACGCTt
acactgtaaacacctccgcaACTGCTTACTCCGCCCCGGGCTAAACTCCA
CTTTCAAATGTATCCCCACCTCTTAAATTATTCTATTTTGAGTGACCTTG
TGTAACAACTTATATATTGTATATACAATGTAAGATGATTGCTATGTATG
TTTCTGAGTCATACACGATTCTCGAGAATCAAATTGTTGCGacccttatt
ttcaaatataatatttACTATGTAGAGTGCAAACCCATTAATCATTATCT
AACGATACATCTTGGCAATACTATGGGTTAGTTTAAGGAATAATTGAAAA
TGTGAACTAGATTTTATGACTCTATACTTATTACTATGATTTCTTAAGCA
GTAaatgtttttatcat Run BLAST on NCBI transcript from alignment at sc0000191:458062..460978- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014642 ID=TCONS_00014642|Name=TCONS_00014642|organism=Clytia hemisphaerica|type=transcript|length=2917bp|location=Sequence derived from alignment at sc0000191:458062..460978- (Clytia hemisphaerica)
GTGGAGGATATGTTTTCTACTCTATTTGTACTAAGACCTTCTGACTACCC
ATAATTACCAAGTGTAGCTGACACATTTACCAGATTTTAAAATTTTAAAA
GCTTATTAAGTTTTCTAGAATCAATAATTTTTGGTAAGAATCGGGTTTTT
TATTTCTAAGTTAGATTAGATTTAGAGTCTTATAGTTCGCATCTGTCAAG
TCGCAGTGCCTGTCTGCGCCGTGATTCCTACTCCTTCGGGAGTAGAACCC
ATTCTGAAAGCATTCGGAGGGCTCATATCTATATCTATAATTGCTCTAGT
TAAAAAATAGTGTAAAATGTTCCATGTTGAGTCGAGAAATAATTGTTTGG
TTATTATTTAGCATAAAATAATGAAGAGAGGGAAGGATCTTTCTTATCAA
TTCAAACTGAAATATAATATCACCTGTCCTTCATATCAACTTTTTTTGTT
TTGTGACTCTTATACTGCTCAGAATGTCTATTTATTTTGCTGGTATATTG
GTACAATGATATTGGAGAAGAATATGAAAAATCACTCCATAGAATTTGAA
TCATTTGTTGATTGTTTGTTTTGGAGTTCAGGTTGAAAATCAAACGAACA
GGAAGCCAAGATTGAGAAGCTAGGGTTCTTTACTTTTTTAAACCTCATTA
CTGGATTGGTCATTAGCATAGAACCATAGCTATACTGTGATCGGCCTGCT
ATATTGTGATCGGAGTAAATACTTCACTTGAATGCGCGTTTTTTTATAAG
AACAAACTAAATAAGAACATAAGCCTTCGATAGCCAAAATCTTATAAACA
AGTTAAGAACATTTTAAGGCTTTGTGGACTCTAAAACACCCAATTTCTTA
GGAAAATGGACCAAAATACTCATAAAATGGTGTAATTAAGAACATGTTAA
GAAGATTTTTAGGCTTAAAACTCAAAAAGTTAAGAACATTTGAAGGCTTC
AAAAATTTTGGATGTTCTTATAGAAATCGTGTACTACGAGAAATGGACAA
GCTTCGAGTTGATTAGAGTAAAATCTTCCTACACCCCTGTCTCGGTGACC
ATTAGTATAGTAGGAAGTTTATAATTCATCAGTCTATGAAGGGTATTTAA
AGTTGACAAAGTTCAACGGGGATTTTAAACCAAGATCAACCATAATTTGT
CATTATTTATCATCATTCTTCAATTTATACTTTGTGTAAGCCAAAACCAA
TAACAGTGCCCAATGTTAATGATAACAGAGTTTTATACTTGTTTGAGTAA
AGAGAACGATTTAAGTTAATTTCATACTCAAAGTTTCTTGCTATCCACGC
AGGATGGCAATCTTCAGTGAAAATCTTAAACCATTCTTCAATTTATTTTA
GCTATAATGGGATATATAAAAGAATCAGCAATGAACTGTACAGAAATTGT
TTTCACGAAAACAGACACGTACCGCACCATACAAATCGTCGTTTTGACAT
TTTTCTTGTCCATCGTCATGCTTAATAACATTTTGGCCATCTATGCAACC
CAAAAATCAATATCAACGAAATATTGTATTTTTGCTCAACTTTACAATAT
TTCATACATCAGTAACATCATGGCTGCTTTTTCATTGTACGGTGGCAGTT
TGTTTATAACCGATTACCATGGCGACGCATTCGGCTGCCGGCAATTACCA
CTTGATCGATATTTCTTTTTATGTTTTGGAATGTCGAATAACGTTTTGGT
TTTGTTGCTAAATACTTATTTAAGACGTAAATCGTTGATGGATCCTCTCG
CAAGTTGTGATGTGCCAAGAAGCAAATGGAAAGCTGTCCTAAAGTTCCTC
GTCCCATTCTTCCTAGTCTCGTTAACGCTGTCAGCGATGAATATTGTATT
CCAATATGAAGTCCAAATGAATTTCTACATTGGAGTTGCAGTTGGGTTTT
ACGTACCTGTCATGATAGTTGTTATCGTGTTAAATATACACCTTACATAC
TTCCTAAACGAAAGTAAAAAGATTGCCGAAAATATTAATCAACAATCGTC
GCGTAACCTAATGAAAGCTCGTAAAATATTATTAATGATCGTTAAACTAC
AATCTTTTTATACCTTTTTATGGATTATCTTGGTCATTTTGATGCATACC
ATTGGTGTAAAGAACGAAATCAATTTTGTTATTCTTGAATGGCTTATGCG
TGTAGTATACGGGCTAAGTTTTGTATTAGAGGCTAAAATTTTAATCCGCC
GTGACAAAGTAGTTCAAAAGGTACTTCTGAAAGCATTTCGTAAAATGTCG
AAATTTTCGAGGGATGTTTCGTCAACGATCAGTCGTTCAGCCACAAGAAG
CAGTCAAAGCAGTAAAAGTAAACAGAAAACTGAACCAAGCAGCATTGAAA
TTCATATGGATCCGGTGGTTTTAGGATCTACTTCTTCATAAAGAACCCTA
AAAACTTTGTAAACTACTTATCAGACAATACTTTCGTCCATTAGAGGGAC
AGTAAACGCGGGAAATATATATGCGCAGATTTTACAGCCATCACGGCGGT
ATACGGGAGAAAAACAAAAATAGTGGTGGTAGAGGTTGGAACAAACGCTT
ACACTGTAAACACCTCCGCAACTGCTTACTCCGCCCCGGGCTAAACTCCA
CTTTCAAATGTATCCCCACCTCTTAAATTATTCTATTTTGAGTGACCTTG
TGTAACAACTTATATATTGTATATACAATGTAAGATGATTGCTATGTATG
TTTCTGAGTCATACACGATTCTCGAGAATCAAATTGTTGCGACCCTTATT
TTCAAATATAATATTTACTATGTAGAGTGCAAACCCATTAATCATTATCT
AACGATACATCTTGGCAATACTATGGGTTAGTTTAAGGAATAATTGAAAA
TGTGAACTAGATTTTATGACTCTATACTTATTACTATGATTTCTTAAGCA
GTAAATGTTTTTATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014642-exon-sc0000191-1575043694:458062..460978 | TCONS_00014642-exon-sc0000191-1575043694:458062..460978 | Clytia hemisphaerica | exon |
| TCONS_00014642-exon-sc0000191-1510915933:458062..460978 | TCONS_00014642-exon-sc0000191-1510915933:458062..460978 | Clytia hemisphaerica | exon |
| TCONS_00014642-exon-sc0000191-1491911889:458062..460978 | TCONS_00014642-exon-sc0000191-1491911889:458062..460978 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191 | supercontig | sc0000191:458062..460978 - |
Blast
The following BLAST results are available for this feature:
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