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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014661 ID=TCONS_00014661|Name=TCONS_00014661|organism=Clytia hemisphaerica|type=transcript|length=1871bp
cggggtgaatcggatacccggggtgaatcggataatTTGTTTAATCGCCT
CTCATACTTCATTGACGATGTCTTTTTCCATTCTGTTTTCAGATCCCGTT
CACTGATCGATCAAGCTATCGGAAAAATATGGCTTCGAAGATTTGGAACA
TGTTCTTCGGAAATGGAAGAAGAAAACCTTCTGATTTTCGGACCCTTTTT
TGAAATGCCGaataagaaaaaatgaagcgacCGCGGTTGGAGATTCCTTT
GGCATTGTGTTCTACGAAAGCCAGTTGTATACAATCTTTGGTTCACTAAA
CGAAAAACAATGTCTATTCTTcgtattttcattttaaagttagGGCGGAA
AATTGTTCGCGTTACAACGCGAATCGCCTTTTCCCACCCATTTTTTAAGG
CGGCTTTTAATGCTACGGCACCGAACAGCGAAGACACACTAGATCCAAAG
ATACAATTACCGCACACTTGCATGTCGTAAACGATTTTTCAATTATATGA
CGTCATTTATCGTGTGGACAATAacgatttttttaattattgctATGAGA
GGTAATAAATATACGTTGTCCCTAGTTCTTTATGTCTCAAATTCCCAAAT
ggattgaaaaagatttttgctgcGTAATGTACTGCAGAGAAAACCCCCTA
AATTTTGTAGCATATGAACAAAgactatttttattataagaaaaaattac
ccaAATCCGTAACAAAATGCATATAGTCTATTGGTCCGATAATATAAACG
GTGCCCTTTTAAGTTCTTGTAATGCACGAAGTTTTATGGTTGAACCGGGG
GCTATTGGGTTATTTCCAGTGCCCTGTTAAAGTGTATAAAATGGCAAGAG
TGACAAGGATTTCCAAGCACACATTTTTAAGTGTGTATGTGAAGAAGGAA
AATCATCTACATAATACACAAGGTACGTTTCATAGCAACTTTTCATTCAA
CTTATACTTTACTTTCTCATCCAAAGCTCCCTGCCACAAAAGGCGGACTT
GATTTTCGCATCTTTATGGGGAAAGTCCCTATGACTTAGCATTTCCCCTC
ACCCACGTTTTATAAGATCTTAAGATGGACATTTTCCTAATACCGGGATT
TCGAGTCCCgccccagctgacacacaacgttattttaacgttcGTCTATG
ttcgttgtgaacgttagatgaacgttaaaacaacgttgtgtgcaaaCTGG
GTCTGTTTTAATATTGGGTACTACGACTATATTAGCTGCTAAGTAAATCC
CCACATACCCTGTGTCATAGATCCTATGCGGGTATTTCCCAATACACGCc
attttttgataagaacaattttataagagcacgaggctgaaatttgaccA
AAAGCTAAGAACTAGTCAACAACAATCTGAGTCTCAATTTTCACAAATTA
CTAAAAAAGTACTaaatttaacagattttaaacacatttatgttttttta
agtaaagaaactaccGCAAGATCATTTACTAAGTCTGaatcaaaatttac
tggttcttatagaaaaaaagtgtgtatgtAATTAGAAGGGAATTAGAACC
ACAAGTTAATTTTCGATAAAAACTGTCATTGGGTATAAATCATTCAGCTT
TAACACAAATATGTGTTCATCCAGCCTGTAATACAACGCTAACGGTGAGG
TGTCCCCTCCGGGGCGGCCTTGATCGGTCGCAGTGTGTTCGTGCCACAAG
GGAATAAGAGTGCCGGTGTAAACAAAAGTGACCGACTCTTCTGCGTGGTG
CAATCGACTTCGGTCGTTCTCTCAAAGTAGCACGATCATGCGCTATGACT
GATCAGGAGCCATCGAGCCAATGATGGTGATAATGGATGTGCACATTCAT
AACCTAAAGCTTTTCGTAAGT Run BLAST on NCBI transcript from alignment at sc0000191:307984..309854 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014661 ID=TCONS_00014661|Name=TCONS_00014661|organism=Clytia hemisphaerica|type=transcript|length=1871bp|location=Sequence derived from alignment at sc0000191:307984..309854 (Clytia hemisphaerica)
ACTTACGAAAAGCTTTAGGTTATGAATGTGCACATCCATTATCACCATCA
TTGGCTCGATGGCTCCTGATCAGTCATAGCGCATGATCGTGCTACTTTGA
GAGAACGACCGAAGTCGATTGCACCACGCAGAAGAGTCGGTCACTTTTGT
TTACACCGGCACTCTTATTCCCTTGTGGCACGAACACACTGCGACCGATC
AAGGCCGCCCCGGAGGGGACACCTCACCGTTAGCGTTGTATTACAGGCTG
GATGAACACATATTTGTGTTAAAGCTGAATGATTTATACCCAATGACAGT
TTTTATCGAAAATTAACTTGTGGTTCTAATTCCCTTCTAATTacatacac
actttttttctataagaaccagtaaattttgattCAGACTTAGTAAATGA
TCTTGCggtagtttctttacttaaaaaaacataaatgtgtttaaaatctg
ttaaatttAGTACTTTTTTAGTAATTTGTGAAAATTGAGACTCAGATTGT
TGTTGACTAGTTCTTAGCTTTTggtcaaatttcagcctcgtgctcttata
aaattgttcttatcaaaaaatgGCGTGTATTGGGAAATACCCGCATAGGA
TCTATGACACAGGGTATGTGGGGATTTACTTAGCAGCTAATATAGTCGTA
GTACCCAATATTAAAACAGACCCAGtttgcacacaacgttgttttaacgt
tcatctaacgttcacaacgaaCATAGACgaacgttaaaataacgttgtgt
gtcagctggggcGGGACTCGAAATCCCGGTATTAGGAAAATGTCCATCTT
AAGATCTTATAAAACGTGGGTGAGGGGAAATGCTAAGTCATAGGGACTTT
CCCCATAAAGATGCGAAAATCAAGTCCGCCTTTTGTGGCAGGGAGCTTTG
GATGAGAAAGTAAAGTATAAGTTGAATGAAAAGTTGCTATGAAACGTACC
TTGTGTATTATGTAGATGATTTTCCTTCTTCACATACACACTTAAAAATG
TGTGCTTGGAAATCCTTGTCACTCTTGCCATTTTATACACTTTAACAGGG
CACTGGAAATAACCCAATAGCCCCCGGTTCAACCATAAAACTTCGTGCAT
TACAAGAACTTAAAAGGGCACCGTTTATATTATCGGACCAATAGACTATA
TGCATTTTGTTACGGATTtgggtaattttttcttataataaaaatagtcT
TTGTTCATATGCTACAAAATTTAGGGGGTTTTCTCTGCAGTACATTACgc
agcaaaaatctttttcaatccATTTGGGAATTTGAGACATAAAGAACTAG
GGACAACGTATATTTATTACCTCTCATagcaataattaaaaaaatcgtTA
TTGTCCACACGATAAATGACGTCATATAATTGAAAAATCGTTTACGACAT
GCAAGTGTGCGGTAATTGTATCTTTGGATCTAGTGTGTCTTCGCTGTTCG
GTGCCGTAGCATTAAAAGCCGCCTTAAAAAATGGGTGGGAAAAGGCGATT
CGCGTTGTAACGCGAACAATTTTCCGCCctaactttaaaatgaaaatacg
AAGAATAGACATTGTTTTTCGTTTAGTGAACCAAAGATTGTATACAACTG
GCTTTCGTAGAACACAATGCCAAAGGAATCTCCAACCGCGgtcgcttcat
tttttcttattCGGCATTTCAAAAAAGGGTCCGAAAATCAGAAGGTTTTC
TTCTTCCATTTCCGAAGAACATGTTCCAAATCTTCGAAGCCATATTTTTC
CGATAGCTTGATCGATCAGTGAACGGGATCTGAAAACAGAATGGAAAAAG
ACATCGTCAATGAAGTATGAGAGGCGATTAAACAAattatccgattcacc
ccgggtatccgattcaccccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014661-exon-sc0000191-1491911889:307984..309854 | TCONS_00014661-exon-sc0000191-1491911889:307984..309854 | Clytia hemisphaerica | exon |
| TCONS_00014661-exon-sc0000191-1510915933:307984..309854 | TCONS_00014661-exon-sc0000191-1510915933:307984..309854 | Clytia hemisphaerica | exon |
| TCONS_00014661-exon-sc0000191-1575043694:307984..309854 | TCONS_00014661-exon-sc0000191-1575043694:307984..309854 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191 | supercontig | sc0000191:307984..309854 . |
Blast
The following BLAST results are available for this feature:
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