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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014670 ID=TCONS_00014670|Name=TCONS_00014670|organism=Clytia hemisphaerica|type=transcript|length=2005bp
gttttgaatggAAATCATAAAACtgaaatcataaattttacACCACTCTC
GTCATGACCATGAAGATTGTAAGAGGGAATGGAAAAGAAATCACTTCGTA
TATACGAgacaataaaagtgaaatcataGACGCCTTTGAGACACCCGGCG
CCCTTCTCCTCCGTGAATTCGACACAAATCAGATTGAAATTGATGAAGTT
GCCCGATTAATAGGATATACACCAGCGCACACTTATATTCCAGGAATCGC
TCCAAGGAAAGCTGCTATAGAAGGAAATCCGTTCGTATTTACTTCGACAG
AAGCACCGCCCCATCTCCCTATCCTTCCTCATACTGAAATGACTTATTGG
CCGGACCCTCCCCATCTTATACTGTTTCAGTGCAAATTTCTTGATAGTTC
ATGTCCTCAAGTCAATGCAAATGAAACTGTGCTATTTGACATGAAACTAG
CTGCTGCTGAGCTAaacgaaaatctgcttgagaAGTTAGCAAATGGCTGC
ATTATGGAACGAAAATACCCTGGCAAATTCAACCCAAACTGGGATATTGA
GGACTCTATTGCAGGAGGTTCTTGTTGGCAAAAAGCTTTTGCTACTGAGA
ATATAGCTGATGTGGAGTCGATATGTAAATTGAATAATGTTGAATTTGAA
TGGATATCAACAGTAAGCAAGGAACCACCAACATTGGTGACAAGATATAA
CTCATCCTGGTATGTCAATCAACGATTGGTTTTACAGACACCCTTGCTAG
GGAAAGCAGTTTACCAAGACATGATCAAACGTTTTCCCCAAAGGTTTGAC
AACCAAAAAATGCACGGAACTGTGGAAGGTGGTTCAGTTGCCCCAAAAGT
GGATCTCTTACATCCTAACATTCCTGGCAAACCTTTTCTTGAAGAATCGG
AAATTGTTGCGTTGATGGAAGCTCTTTGGAAACATGTTGTGTTTATTGAG
TGGGAAAAAGGTGATGTTGTTTTGATAGACAACATGAATATGGCTCATGG
AAGGATGAATTGTGCAGGGAAACGGAGGATTGTTGCCTCAATGGCACACA
AGCGTTAAAGATTATCTGGTCAATGAGAAATATTGGAAtcataaactttt
tttaatttattaatttACGCATCTGGAAAGTATGATTATATTTCCGttta
tcatttttcaaattttacacgTTTACGTATACTTGtaatttgtaattgct
tgcagtattcctTTGAATTCATTTATTGTTCGGTTTCCCAAATGCCTAAG
GGTGTTTGGCATTTGAAATGTCAATTTGAGCGGAGGAATCCCCTTTTCAa
gcatttcaaaacaaacaaagagaaaataatCACATTTCACAGGTTATGAC
GAAAAATACTATGGAAACGGCCGAAAGTATCAAAATTGAGTCCCAAATGC
CAAATACCAAAAGCCGTCATATGTAAATGAGTGTGTGGTCTGAAACTGTT
GATTGCATCTTTTTGTTTGTGATAGTGATTCCAAGACCACCGACACGAGG
cggaaatatgaaaaaatttcttttacgATCGTTACATGTGTAACCATTGA
GGAGAGCTGATAGGAGTGATGCTCATATGACTTCTTCAAATGGAACAAAA
TATTCTCTTGTCACAGGTACGGTCCTTATGATGTAGGTTGTGTTGTATAC
TGTTTGTGAATGCACAGTACGCTGAATGGGGATGCATCCTGGCAATTTTG
CTCAGTGACTTTTTTCAACGataataacactaaatcgaAGGATTAGGAAA
GTAACCAATCTTTGGACCATATTGAACGATGGTATTCCACTAATCTTCTA
ACGCTTCGATAGAGCCAAGATCAGTGAGGCCATCAGCAAACGCGATCTTC
TTAGCTGTGCTACCTGCTGCTTCTAGAAGTGGCAAAATCGCTAGCGAGTA
TGTTGTCATTGATGTTGGATTTGGATTACCCTTCTTTCGATGCTAATTCT
TTGCCGCGAGTTAGGAATAGACGTGCTGGTTTGGCGTAGCTGCTTTGTAc
aaccc Run BLAST on NCBI transcript from alignment at sc0000197:130469..133099+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014670 ID=TCONS_00014670|Name=TCONS_00014670|organism=Clytia hemisphaerica|type=transcript|length=2631bp|location=Sequence derived from alignment at sc0000197:130469..133099+ (Clytia hemisphaerica)
gttttgaatggAAATCATAAAACtgaaatcataaattttacgtAAGTAAC
AAActtgaacaatttttttctctttttagtcAGCTATAAATATCTAAATT
TGCAGGAGCACTTGAAAATCTAGGTTGTGTAGTATAGTGTGTCTGTATAT
TGTTAGAACGTTGTATATTTGAATGGGATTTGGGTAGCTACAGAATCATT
GTTATATACAATCCGAATTTTCTTATGTTAAATCTATTCGCcatagtttt
attaaaaaatcaaatcaaaattagtAGCGTAGACAGAGGTGAAAGAAATT
TGAGAGCAGATTGAAACGACACAGTAAGTATGTTTTTATAGTACGAATAG
GTAAGTGCTTTGccgtaaaaatctgctctcctacgcagATCGTTTTTCAC
CCATATCTACGCTACTGTACTGTAAAAGCTGTTTGGCTACGCCATCGTCA
GAACAAACATAAAAGCAAAGCAAAGGAATCgataaaaatgtaaatacaTA
TGAAATTATTCTTTAGGGTATATTCAAGTAATGCCATTTCTGAAAAATTG
TACAGTAATTGTTGTGTTTTTAGTTGATTGTTAAGTGACGGTTCCATGGT
AGCTATAAACGACGCTTCTAGAAACTTCCTATTCATCCCGAAATTTTCTT
ATGATTCTTTGTCTTAGACCACTCTCGTCATGACCATGAAGATTGTAAGA
GGGAATGGAAAAGAAATCACTTCGTATATACGAgacaataaaagtgaaat
cataGACGCCTTTGAGACACCCGGCGCCCTTCTCCTCCGTGAATTCGACA
CAAATCAGATTGAAATTGATGAAGTTGCCCGATTAATAGGATATACACCA
GCGCACACTTATATTCCAGGAATCGCTCCAAGGAAAGCTGCTATAGAAGG
AAATCCGTTCGTATTTACTTCGACAGAAGCACCGCCCCATCTCCCTATCC
TTCCTCATACTGAAATGACTTATTGGCCGGACCCTCCCCATCTTATACTG
TTTCAGTGCAAATTTCTTGATAGTTCATGTCCTCAAGTCAATGCAAATGA
AACTGTGCTATTTGACATGAAACTAGCTGCTGCTGAGCTAaacgaaaatc
tgcttgagaAGTTAGCAAATGGCTGCATTATGGAACGAAAATACCCTGGC
AAATTCAACCCAAACTGGGATATTGAGGACTCTATTGCAGGAGGTTCTTG
TTGGCAAAAAGCTTTTGCTACTGAGAATATAGCTGATGTGGAGTCGATAT
GTAAATTGAATAATGTTGAATTTGAATGGATATCAACAGTAAGCAAGGAA
CCACCAACATTGGTGACAAGATATAACTCATCCTGGTATGTCAATCAACG
ATTGGTTTTACAGACACCCTTGCTAGGGAAAGCAGTTTACCAAGACATGA
TCAAACGTTTTCCCCAAAGGTTTGACAACCAAAAAATGCACGGAACTGTG
GAAGGTGGTTCAGTTGCCCCAAAAGTGGATCTCTTACATCCTAACATTCC
TGGCAAACCTTTTCTTGAAGAATCGGAAATTGTTGCGTTGATGGAAGCTC
TTTGGAAACATGTTGTGTTTATTGAGTGGGAAAAAGGTGATGTTGTTTTG
ATAGACAACATGAATATGGCTCATGGAAGGATGAATTGTGCAGGGAAACG
GAGGATTGTTGCCTCAATGGCACACAAGCGTTAAAGATTATCTGGTCAAT
GAGAAATATTGGAAtcataaactttttttaatttattaatttACGCATCT
GGAAAGTATGATTATATTTCCGtttatcatttttcaaattttacacgTTT
ACGTATACTTGtaatttgtaattgcttgcagtattcctTTGAATTCATTT
ATTGTTCGGTTTCCCAAATGCCTAAGGGTGTTTGGCATTTGAAATGTCAA
TTTGAGCGGAGGAATCCCCTTTTCAagcatttcaaaacaaacaaagagaa
aataatCACATTTCACAGGTTATGACGAAAAATACTATGGAAACGGCCGA
AAGTATCAAAATTGAGTCCCAAATGCCAAATACCAAAAGCCGTCATATGT
AAATGAGTGTGTGGTCTGAAACTGTTGATTGCATCTTTTTGTTTGTGATA
GTGATTCCAAGACCACCGACACGAGGcggaaatatgaaaaaatttctttt
acgATCGTTACATGTGTAACCATTGAGGAGAGCTGATAGGAGTGATGCTC
ATATGACTTCTTCAAATGGAACAAAATATTCTCTTGTCACAGGTACGGTC
CTTATGATGTAGGTTGTGTTGTATACTGTTTGTGAATGCACAGTACGCTG
AATGGGGATGCATCCTGGCAATTTTGCTCAGTGACTTTTTTCAACGataa
taacactaaatcgaAGGATTAGGAAAGTAACCAATCTTTGGACCATATTG
AACGATGGTATTCCACTAATCTTCTAACGCTTCGATAGAGCCAAGATCAG
TGAGGCCATCAGCAAACGCGATCTTCTTAGCTGTGCTACCTGCTGCTTCT
AGAAGTGGCAAAATCGCTAGCGAGTATGTTGTCATTGATGTTGGATTTGG
ATTACCCTTCTTTCGATGCTAATTCTTTGCCGCGAGTTAGGAATAGACGT
GCTGGTTTGGCGTAGCTGCTTTGTAcaaccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014670-exon-sc0000197-1491911889:130469..130509 | TCONS_00014670-exon-sc0000197-1491911889:130469..130509 | Clytia hemisphaerica | exon |
| TCONS_00014670-exon-sc0000197-1510915933:130469..130509 | TCONS_00014670-exon-sc0000197-1510915933:130469..130509 | Clytia hemisphaerica | exon |
| TCONS_00014670-exon-sc0000197-1575043694:130469..130509 | TCONS_00014670-exon-sc0000197-1575043694:130469..130509 | Clytia hemisphaerica | exon |
| TCONS_00014670-exon-sc0000197-1491911889:131136..133099 | TCONS_00014670-exon-sc0000197-1491911889:131136..133099 | Clytia hemisphaerica | exon |
| TCONS_00014670-exon-sc0000197-1510915933:131136..133099 | TCONS_00014670-exon-sc0000197-1510915933:131136..133099 | Clytia hemisphaerica | exon |
| TCONS_00014670-exon-sc0000197-1575043694:131136..133099 | TCONS_00014670-exon-sc0000197-1575043694:131136..133099 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000197 | supercontig | sc0000197:130469..133099 + |
Blast
The following BLAST results are available for this feature:
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