TCONS_00014767 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00014767
Unique Name	TCONS_00014767
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2646

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000198:156870..173631+

transcript sequence

>TCONS_00014767 ID=TCONS_00014767|Name=TCONS_00014767|organism=Clytia hemisphaerica|type=transcript|length=2646bp
TTAGAACTAATTGAGAAGATCATACTAGATAACATAACATAATAACAATA
CAAATTCCAACATGGCTACAGCAGACCAACAACGATCACTTAAAGATGCA
ATGGAAAGAGCTAAACAgatTGCTGCAAAACTTCAAGCGCAGCAGGCAGC
AGGACTTCCGTTAGAAGAAACACGTAAGAGGAGCTTGGCAGATGatgACC
AGTCAGAATCACCAATGAATAAAATGGCATTTGTTCCTCCTATGGGTGGA
CCAATTGACCCATCGGATCCAAAATCCATAGCTCAACAAGTAGCTAATAG
TCTTGTGCAAAGGGCTGGTTTTGGTTCAATGCTCGTGGAAGAAGTAATGA
TTCCAAATAAACTTGTTGGGTTAGTTATTGGTCGTGGTGGTGAAATGATC
AACAAACTTCAATCAGAATCAGGAGCAAAGATACAAGTTGCTACTGATCC
ACCACCAGAGATAGCAGCGATGCAAACAGAACGTCAAGTCACCATCACAG
GAATGGCTGATAATGTCAACAAAGCCAAAAGTCTTATTGACGAGATTCGA
TCCGAAGGAAAAGTTCCTGAAAGACTTCTTAgtggaggaggaggaggagc
cAGCGAATATTCAACGGAAATGTTGATTCCTTCAACAAAAGTTGGATTAG
TTATCGGAAAAGGTGGAGAAACGATCAAAAGTCTCCAGGAACGAGCTGGT
TGTAAAATGGTCCTCTTCCAAGATGGAGAATATCAACAGTCCAACGAAAA
ACCCTTACGCATTAGTGGAGAACACAACAAAGTCATGTATGGTAAACAAT
TAGTTCAAGACTTACTCACTCAAAAAGAACTTGAGGCTATGGGAAAAGAC
TCAAATCAAGGGATGCAAAAGACCCAAGATGGACACATTTATGAAGAGTT
TCAAGTCCCTCGTGAAGCGGTTGGTTTTGTCATCGGCACCAGAGGTTCAA
GCATTAACAACATACAACAACAGACAGGATGCAAAGTTCAATTCAAAAAT
GAAATGGAAGGAGATTTCAAGATCGCCATGTTGAATGGAACACCACAACA
AGTACAGGCTGCAAAAGATGCTCTCGTCGAATGCATACAGAGCCATTCTG
AGAGGAAGAATGacggtggtggtggtggtggtggtggcaGAAATCAAAGT
TGGGGTGGTAATCGAGGAGGTGGATGGAATGGTCCTGATGGGCGTAATGG
AGGGCCAAGAGGTTATCGTGATCAAGGGCGGAATACTGGTGGTGGGCGCC
ATCAACAATTACCACCCGGTCATAAACACGTCTGTGTTGACGTGCCTTCA
AATAAATGTGGTCTTATCATTGGTAAAGGTGGCGAAACTTTGAAATTCAT
CCACCAAGATACCAAAGTCTTTATCGAGATTGAACGAAATTCACCTCCAG
ATGCACCAACACGAGTTTTCCATCTCAAAGGTACGGATGAAATGATCGAA
ATGGCGCTCCACGAAATGAGGGATAAGATCAATGATCAGAACATCTGCGC
CAGACCATTCATGCCACAAGGAGGCGGACCTGGCTGGGGTGGCCCAGGAG
GTCCTGGGGGACCTGGAGGATGGGGTAACCAAGGTTGGAATCAAGGAGGA
GGCTGGAACCAGGGTGGTGGTTGGAATCAACCCCAAGGAGGATGGGGACA
AGGTGGATGGAACCAAGGAGGATGGAATCAACAGCAAGGAGGATGGGGGC
AACCTCAACAAGGAGGATGGGGACAACAACCCTACCAACAGCAGCAATGG
GGACAGCAATCGAGCGCTCCCAACACTTCAACGACTACCACCACACCCAC
AGCCAACCCAGCAACAGGACAACCCGATTACAGTGCAGCATGGGCGCAAT
ATTATCAACAACAGCAGATGTATTACCAACAATATCAATCTACCGCCGCC
TCAAGCTCAACTACAACGACCACGACCGCCTCATCTGCTTCAGGTGGAGC
TCAAAGCCAATCGATGGAAGAGTACCAGAAGAAACTAGCCGAGTATTACA
AGCAATACGGACAAGGGGAGGCTGCCAAACCGGAAAAATAAACGGGAATG
TGAAGTGATTGAATGGGAACTGTCGAAAAAGAATGACTGGTAAAATTGTG
AGGCTGCAAAGGTGAAATGGTTtaagctttcaaaaaaattaactcgccaa
ataaaatgATTTATTTCAGGATTATGACTGCGTCATGAGCAGCTGACAAA
CGATCGTTGGAAAGACATCGAAATCAAACTTATTTCATAATATATgtact
ctttaactcgaacaagttttatcgtcccttcagttaacaatgccttatac
atgttttttggacctaccccggtggaggtcctataaattaacctgtgttt
gttcgtccgttcgtccgtccgttagtctgttaccaacttttctcaggatt
gaatcataggaatcttttgatttttggtacaaaggtgcaaaatggtggtg
gccaaaatgtgacggagcccgattttcgaaaaaaaaattttttgggccaa
tttgggctaaaaaacgggttttttagattttgtgaaaaattgggtcattg
attttttctgattttttgtatgaaagtagggtaccatcataggtaaaaga
tggctcaagcagatttttgcaaaaaaattttgttggctcaaaaaac

Run BLAST on NCBI

transcript from alignment at sc0000198:156870..173631+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00014767 ID=TCONS_00014767|Name=TCONS_00014767|organism=Clytia hemisphaerica|type=transcript|length=16762bp|location=Sequence derived from alignment at sc0000198:156870..173631+ (Clytia hemisphaerica)
TTAGAACTAATTGAGAAGATCATACTAGATAACATAACATAATAACAATA
CAAATTCCAACATGGCTACAGCAGACCAACAACGATCACTTAAAGATGCA
ATGGAAAGAGCTAAACAggtgtatattttttatttaaatctgAAATCCat
tgaaaagttaaactaaGCCTAAAGATAATATAATTTTGCATTGTGATCTA
TTcactgtgttttttttcttctagatTGCTGCAAAACTTCAAGCGCAGCA
GGCAGCAGGACTTCCGTTAGAAGGTATGCTTAAATTCTATCCAAATGATC
AAATGAAGCAAAATACACAAGGTCGCATTCTTTATTTAAACCCTAATTAA
AAGTGAGCTTAGTAACCCTAGTAAAGTTGAAAACATCTCTCGTAGAagta
ttcaaatttttactggTATATGTAAGATTGTGACATCTGGTcacctagaa
gataagaacaccaATTTCTAAAAAGTGCTTTTCAAACTGATTTTGAATAC
AGGGTGTCTTAAAAAGTCTTGTGTCAGACCACTTCTATAAGTAGACAAGT
TTTGGTGTATGACAGTTTTTTTTGAATGCAATATTaaataattaaaactt
gattATTTACAAATCACAATAATGCACTTATGAAACACAAAATGTGAAAA
CATATGTGAATAGACATATCAACTTAATGCAACATAATCCAAAAATAatc
cgaaaatatttttttaaagatcgTCTCGTATCAAGTAATTAAAAAGAATA
CTACCTTATTGTACACAAATAAGCAGACATGTAATTAACACAAATTAGGA
AATTTTGTATTGATTGAAACCCCTtcaattaaaaccagccgtggtgtcca
tgaaaaagcaaataaaatttgtgttaatATTTTGCGTGTTATTTCGTAAT
TTCAAGGCAGTTAATTATGTGTCTACTTATTTTTGGTATTAAGAAGGGTA
TTTAGATTTTGTGATACAcaaacaatgttttttcttatagaagttatagA
CTTACACTTATAGAAGTGGTCTAACACAGGACttcgggacacactgtata
tatCTAGATCTTATAAGATCCTTTCACATCTATAACAATAACATATGAAT
GTCATTGATTTTTAGAAACACGTAAGAGGAGCTTGGCAGATGGTAAGTCA
TAAAGTCATTTGAAAGACTATTTGATATGTCTTTCTGGACAATATTACTC
CTGGGTACCTAGTGGACAGGAACTTGACTAGACAGATGGTTTTAAAGGAA
GTGCCAAGAAAAATAGTTGAGGGGTTTGAAATAAGAATCAATGTCACATG
TGAAAGGTTTTAAGAGAAAAATTAATGTGATGATGATacttttttagaaa
cttttaatAAGAGTactttgaaatgttttaaattacattcaagcatttta
agtatttttctttcagatgACCAGTCAGAATCACCAATGAATAAAATGGC
ATTTGTTCCTCCTATGGGTGGACCAAGTAAGTATTCTAAACTGCCTATAT
CTTATTTCTTCAACAACATACTAAGTAGTACCCTAACAAATAGTTTGTGG
GCAgccagtcaaaaaaaaaaacacacaacaTTTTAAAGTTCAGCCTAAGA
TGGTTGACAATATTTGCATGGTatttgttttttgatgaaaaaaattactt
gTAAATATGTCTTTTTCACTATCACTCTTTCATCCCTTTTTTAGTTGACC
CATCGGATCCAAAATCCATAGCTCAACAAGTAGCTAATAGTCTTGTGCAA
AGGTAAAATCCATAAATTCTGTAAATTCTGCCTtatttgaaataaacaaa
attgaTTCAGCTACATCACAGGCAACTCTTGATTATCATGGTAATTGCGA
AATGAGTCGCAACAATGtaacgttttttttctttgcaactTTCATTAAGG
GCTGGTTTTGGTTCAATGCTCGTGGAAGAAGTAATGATTCCAAATAAACT
TGTTGGGTTAGGTATGTgatctaatttttattatttcaaatcaatttcca
tttttatttaAACATTTGCTATTTATTGCTCAGACCATTTTTCatgattt
aacttttttagaaTTCTGAGAAAAAAGCCTATTTTATGGATAACAATTGG
AAAACTGCTCTTTGGCTTATAGTGGTCGTTGGTTGCCCTTCTTGAATATA
TTATGcccttttgttttgatattgtgATATTAATGATAAGAAATTCAAGC
TCTGGCGAAATCTGCATGTGACTTCGTCATTCAAATGACCAATAGTTCAA
TATAAAAATTAGTACCATACAAAATCAATAGTTTCAAGTTATCAATAGTA
TAAACTTTTATCTTTGATATTGAGATTAGGCACTTTTCATACAGAGGAAT
AATCAATATTTCATATAACAAAAAGACCAATCTCacataaagaaattatt
ataaatttaCCAAGACACTtgttttgagattgaacctttcgTCATGTGAA
CGACGTAGCGATCTTCTAATATAAATTGTTTTCCAGTTATTGGTCGTGGT
GGTGAAATGATCAACAAACTTCAATCAGAATCAGGAGCAAAGATACAAGT
TGCTACTGGTAAAGTTCTTGTTGTTTCAAAACTCATTCAGTTAATGTTAG
AAATATGTAAGGCTGGACTTTGGTCTGCCATCACCTGACCTGAGATAGTG
CCTGATAGAGGTTTTGATttggagagaaaaaaaatcttctttgaaatAGC
AATAGAATTATTTGGGTCAGCAGATTTTGACTTAGGGTCGGCCAGGTGAC
GGTGAACCAACATTTCAGACTAATAACATACTCTTTTGATTATCAACCCA
CAAAAACATGAACAATGATAGAGGTGATAAAGGATGCCTTTCTTAATTAG
TAGTATAATAATATATTTTCAATTCTGTGTGTGAAAATAACcaccaaaat
aataaaaataacaattagAAAATTTACTTAGATTTTGTTTGTATTTCGAT
ACATCTTCTTTCATTTGTAGATCCACCACCAGAGATAGCAGCGATGCAAA
CAGAACGTCAAGTCACCATCACAGGAATGGCTGATAATGTCAAGTACGTT
AGCTAAAAAACATATTAATGTTTTACATAATTCAATAACCAGCAACTCAG
TTCTCTCTTAGTAGAAGTAGGGGGGCCAATCTTTATGATTCGTAGCATCT
GTCCTTGGACTCGACTGCATGTGATTGTTTTGAAAGTAGATAGGATTCTG
AAACTTTTAGAAAGGGGGCCCGCGGATTAGGCCTGGCAAAAATTTTAATG
TCCAAAGATCTGATAGAAAGNAAGGGGGCCCGCGGATTAGGCCTGGCAAA
AATTTTAATGTCCAAAAATCTGATAGAAAgtatgatttcaaaaaaatcaa
cagGAAAAAACTCAAGTCAAAATGTAAATGAAGtcaaatcttttcatttt
aGCAAAGCCAAAAGTCTTATTGACGAGATTCGATCCGAAGGAAAAGTTCC
TGAAAGACTTGTAAGTTTGCAAGTTTCCTTTTAATGATGTATGTGATAAA
CAACTATATATAATAACTGATTTTGTGCGTTTCTATCTCGCATTTATTAT
GGTATTACAGTTAGCACTTCAAAGGAATATGAATTATTTCTCTTACTTTT
TTCATTTAGCTTAgtggaggaggaggaggagccAGCGAATATTCAACGGA
AATGTTGATTCCTTCAACAAAAGTTGGATTAGTTATCGGTAAGTTAACAA
TAACAACCTCcaaaaacattgttaaaagcaacatttttttcattaattct
GCCCAAATTTTACTACCTAAAGTGGTAGTATGTCTAGCCAGCTTtggaaa
tttgtttttcttgtttgcaCAAAACGCATTGTCTTGCATATTGGGGTAGT
CTTTTGCTGAAAACGTTTTAATAATTAGACATACAATTTCATTATTGAAT
AATTTCTTTTCCAGGAAAAGGTGGAGAAACGATCAAAAGTCTCCAGGAAC
GAGCTGGTTGTAAAATGGTCCTCTTCCAAGATGGAGAATATCAACAGTCC
AACGAAAAACCCTTACGCATTAGTGGAGAACACAACAAAGTCATGGTACG
CTGATTTCCTCCTCCTTCCTCCACAGACTTGATAATTTTTCTTGCACAAG
CCTAGTGTTTTAACAAGTGTTCTTTTCGTTTTGCTGATCAAGTGAAAAAA
GCAAGTTCtcatgaaaaaatacttttcctCATAGCCAGATTCTCATCCCA
GCCGGGCTTAAGTTTTAATAATTGTGTTCCTAAGTTTAGGCGAAATGTAT
tacatgaaaaaaataactatCATAACCTTCTTTTTTTCTAGTATGGTAAA
CAATTAGTTCAAGACTTACTCACTCAAAAAGAACTTGAGGTCAGTCTTTC
ATGTTTAATATTCTTTCACAATCTGTACAAACAcgatttagtttttttta
aggttagagaaaatcattttttacaatagcgcaccgcgctgaatctaaaa
atatattttatttttgacatcattactctcgatgtgtttgtatgagttcc
aatcccatcaacctttgcgttaatctctttcacacgttaaatttcatcat
taaaaaaaaagatgtataacaacttgcacgtatctttaattgagccgcat
tgtattgtgggattgcaactcgtacaaatgtcaaaaaaagtgaaaagtga
taattatgacgtatgcgttgcggagcgctattaaCTTGAAGATTTTTCTC
TTCTAGATCCACCCGACTTTGTATAATTAAAGTGATATAGTGGACCCGGT
TTGAGGTGTTAAAAGCCTTGGAATAAGTCAAAATAACATCCTTAACTCNC
TAGATCCACCCGACTTTGTATAATTAAAGTGATATAGTGGACCCGGTTTG
AGGTGTTAAAAGCCTTGGAATAAGTCAAAATAACATCCTTAACTCTTTTC
TAGGCTATGGGAAAAGACTCAAATCAAGGGATGCAAAAGACCCAAGATGG
ACACATTTATGAAGAGGTATAAATTGAATAATAGCAAACCCAAGAAATAC
CACTTATAGTGTAGGGGGCCAATCCTTATGAACGTAGCATCATCTTGGGA
CTCAATTGaaactcaaattttgaaacctttttataGGGGTTTGCGGATCA
GTGTCTGTCGGTCTATGGCCAAAAAACTGACGTTGTAGTCAAATCTCATA
ACCTTGAAAATGAGCAACAAATTGACTACAttaaactctttttttataag
catatgggAAAATCGGGTCGAGGCTCAATTACTCTGTACCAAGAGTGttt
ctcacgtttatcgcttcgttgtacactctgtgcgcatttttctgtttgat
aaaaaaattcccgtatgGAGACCCTCTGTGatgaaatatgatttttaaat
aGCAACAATactctcatcgtctcccctctctcgcCAACACCCCATCGCAa
aggtcggtttgaaaaatatcaaatgagaaaagataatgacaacagaccct
ctacggcaatgaattttgccTGTGTACAGACAAAGGCTCCATATGCTTAG
CAAAACCTCATTTTCAGCTTTGATTAATGCTTACATATTATTCTTAGACT
TTGATTTGTTGATTTCTTTTGggttcatgaaaatttcgaaatcttAAGTC
AGAACATTGATTCGGCTCAAAGaattaaagttttctttgtaatttggcgT
CACAGGCGAAAATATTTGGTCTAAGAAAGcacaaacagctttaaaagtaa
ccctaCAAAGGTTTTAGAAAAGCTACACGATTTTTTTGTATTGCAGCTTG
GGGGTGTATTTAgtattatgcttattttttactgCATTTGAGCCttagta
tgcttataaacgttatgcttatagaaaaatgaGTGAATTTGCGAAAAAGA
TGATGCCTTCTTTTAACACTCACATTTTGCTCGTTAGTTTCAAGTCCCTC
GTGAAGCGGTTGGTTTTGTCATCGGCACCAGAGGTTCAAGCATTAACAAC
ATACAACAACAGACAGGATGCAAAGTTCAATTCAAAAGTAAGGAAATTGT
TTACTAGCTCTCTTGGCCGTAGCACAGATGTCGCTCACTTGATGTCTCTC
TACTTGATGTTCAGCAAATAAAGAGAAGGGTCAAGTGGAAAGTTGTAGCA
CCCTCCTCTTCCGTTTCTAAGTCAGTGCTTTAAGTACGTGGTCGATGCTT
GCTATACGGTAGGGTCAAGCTTATCATTCAAAGATTATATTTTACAATAC
TAAAGTCTCTTTCTGGTTCGGCTGTCTTTTTGTGGAAACCAAAGAGGCCT
AAGTGCACTCTGTATAATTATGGGTAATTAAAACAATTTAGCTTTAATCG
TACATTATTTTCAATGCAAATAGGACCATTTTCTCTCTAAAGTTCAAAAG
CAAACTTATTTTACCAAGCAGGGATACTTATCTCCAATTAAGTAAGAGTT
CTGAGGTCTAACAGCTGGAGATTTTTTATTCTCATTTGGTGACGGCTTTT
TTTCGTCTTAGATGAAATGGAAGGAGATTTCAAGATCGCCATGTTGAATG
GAACACCACAACAAGTACAGGCTGCAAAAGATGCTCTCGTCGAATGCATA
CAGAGCGTATGACTTTATTATCTATTATTGTCCAATAAGGTTGCAATACA
TGAAGAAATTTTGTAGCCAAGTAAATCTATTTAAGGGACATTGAATTTGA
TTAAGTtgtaaatattcttttttctgTAAACTATGTTAGACGAGAATCAT
CAAAATCagaactgtaatttttttggatCTCCTAAACCATTTACTGTTTA
GGTATCActtgattatttttatttttctcaataGCATTCTGAGAGGAAGA
ATGacggtggtggtggtggtggtggtggcaGAAATCAAGTAAGAGTTTGG
TTGCTTTTTCATTTACTGTCCCACACTTTTCAAACGAACGAAGCTTTTCT
GTTTTTACTAGTCAGGAAGTAAGAAGAAGCATAATTGTAATAGCCACTTT
CCTTTTCATTTAAATACtttaaacataaaattttaaattaatagCAATAT
TGACTAATTGTTAAACTAGAGTAAGTATGAACGAATATGTTAAAATAAAG
ACTAAATATAAACTAACGGTCTTTGCCTGGATACCATGTGAATTGAAAGT
AAGAGCAGCCGAGGGATTATTGTTAAATAGGCCGCCCTATCTTACTTGTG
TATACTTACATGAACAGTGCCGTTGTGAAATAAAACacaattaaataata
aatataaaagTTACGAGAACCTGGTATCTAGGATATCGCTGCTTTCGAAA
GTATGAGTTTTATTgtttattcattcatttattcattcattcatttgttt
attcattcgttcatttgtttattcatttattcattcattcattcattcgt
ttaACTCGACCCATAGCTAAACGGATGGTATTAATTTAGCGTTTCATTTT
CACCGTCTATCGGGGATCTTCATCAGCTGTTATCACATCACTGAACTTTG
GTGGCTTTTTGCACTGATGGCGGTTTTTTATCAGTGCGAAGGTTGGGGAA
TCCAGGTTAACACCTGTTAGCAATCTCAAACCCAAGACAGTGTTCTGGCT
TTTTGACTTTCGGCGATCTTATTGATGTTATTATATGTTGAAATCTATTA
ACTTATTCATACGTCATTCTATAGCAATATTGGATTCCGTCAAGTACTTA
GTCATCTCTATCTCTATGTGTGACATACTGGACAGGTGGTATCAATTCGG
CATTTTCACTTTCACCATCCATAGGGGAATCATCATCagctgattttacg
tcactgaAAGCTACCATTGGGACTGTGGGCATTGACGGTGATttctttat
tgttttgtttgaaGAGTCTAGGTTGAAATCTGTATGCAAGTTCAAAGACA
TGACACTTTTTCTTCCTTCCGAAGGCTCCTTGGTGTTAGACTTCTTAGAA
TGATCGATTTCATCATATCTGGTTGTTTTGAACCTGTTAACAAAGCTGTA
TTCCCTGGGTACTAATTCAATAGTGCTTACTGGTTCAACCTGGAATCTGG
AACTGCCGGTGTTAAATCCAAGAACCTTTTTCATATGGTTCAACCCACTA
GCCGGTTTATTAACCAGACGATTGGTTACAGCTGTGTACTCATTATCTTC
TTCAATACCTTTGATTAAATAACTCAATTCCTTTGCAACTTTTTGACCCT
TGGCTCCCTGAatagtttctttgtttttgagatCGATGTTTCTCAACCGA
CTGTAATCTTGAATCAAGCTTTCCTCGATAGCATTTCTCTCAATCCCATT
ATATCTGTGCAAAATTTGTCGAGTTTCTTTCAAATCCTTTTTCCAAGAGC
TTGTGATGGCAGTTGCGGTCTTTGGAGCAATTTCTTTGATCCTCAGCATA
GCAACACCCATCATGAATATAACGGTAATGTTTATACGTGTTAGCGCCAA
GCTCATCCCTCCTAAACTGCCAAGGTGACGAGCATCAAAGTGAATAATTA
ACTGCGACGATTGATCAGGTGTTACATTCTTAGTGCTGTTTACGAGTGCA
AAGGCCCACAACATCCCAGCATTTACAGCAGGACAAAGCAAGGAAGCCGA
TACTACAGCACCAATTAATGATTTCATGTTTCCTTGAAGGAGCGATAAAG
CAACTGCTACACCCGATGGTATTGCAACAATTAAACCAACTATTAGACCC
CTTGGTTCACCTCTAGATTGCATTTCAACAGTAACTTTGTCCGAAATTCC
AGTTAAGTAAGCTATCAAACCAATTAAGAAACCAGTAAAAAGACAAAGTG
CTAAGCCAATTAATTCGTTGATAATTGCACGCTTCCAAATTATTTTGCTT
TGTAAAACTAAACCAAACGTACCACCCATGATAGGTCCCATGATTGGTGA
TACTAACATACTTGCGACCAAAAGAACGGTACTGTTTTCTAGAAATCCAA
TAGCTGATATAGTGCTTGCTACTATTAACAACATAATGTAATCGAAAGTC
AATTTTGACCCAATTTTGACTGACTTTACCACTTGTGCAACATTCATTCT
TGATTTGAGACTTTTACGGAATTCGTTCATATCATCAGGaattttattct
ctttttccACAGCTGTTGGAAAGTGGATGTTGATGGGAATAATACTAACA
GAGGAGTATTTATTATTCCCTATCCCTGCATCCAGAAGCGCATTTAAAAG
GCTGTCAGCTTTATCTTCGTCGAGCACAAATAGAATTTTCCAGCTATCAC
TATTTGTATTCCTTAAACATGTAGCATCGATTTTCAATTCCAAGTTATTT
ATAATTGCCTCAAATCTTATAAACCTTATAAATCTAATATTTGAGGACAG
AATTCTGCTTTGCATTCTAGTGTCGCTTTGTATCTTCTCGAATTGTGACC
CTTGAGGAAGTTGTCTCTTCATTGGTCTCTTGTTCGTGTTCGGTCACTAT
TTCGTGGTCTTCTTCTTCAAGAGGGAGTGtaacaataaacaaaacaacag
ACATTTTCAATGTTAGTGATTTTTTTAGTACAGCTCTAAATGAGATGAAG
AAGAAATGAAATGATTAAACAAGGGCAGAGTTAGTTTGAATTTGCAAAAA
GATATACTTAAAAAGACTAAGATTCAATCAAATGTCGGCTGagtgtaaaa
aaattattcgTGTCCTCTCTCAACTCAAGTAAAGATAAAGCAAGCCTTAC
TCATAGGCTTATGCTTCccattaaaaactttttttgagatCGTTAAATAG
TCAATATAAGATTGTACTTATTAAGAACTGCTGACTCGCAATATTAAAAG
GGGACAAAATCACTGTGTAAATTACCTCAATAATGATAATGTCTTTCAAT
GGTCAAAGACATACATTGTTAGGTTGTCATAcacctttttttgataagaa
aCAGTAAATTTTTGACGATGCGTTTTAAGCCTCATATTGTTTTTTCATAT
TCTTTTTAGAGCAAAATTGAGATATGTTAGGCTCCGTGTCCAGACCTTGA
TCCTTTAAAACTGCTGGAAATTCAGCTATTCCAACTGTCCCTTTCGTTCT
TAAACTGTTCTTTTTTTGTGGTGATTGGAATCtccatgttcttataaaat
aactttAGTAAAAggagtactcttaggtgccaaataaacgcccccccccc
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNccaaccccccccccccccgtttatttggcac
ctaagaatAGTTATCTATTGATTCCACGTTCAGGAAAATGAAGGATAGTG
AAGGGATAAAAATGACGAGGACTTTAAGAATGTCTATTTAAATGATCAAC
ACTCAAAATGAAAGTTCATTCAAAATTTCCCAGTGCACATTCAGCATTAG
ATAGTACTTTCAAACGTGAGAATAACCATAATACCTTAgactatttatat
ttatatatatagAGCATGCATAACGGAATAAATGCAAGTAGATATATAAT
AAGGTTATACTTCCTGTTTTGAGTGCTCTGAGAATAAAGAATCAAAATCA
ATTACACTGAATAAGAATATTCTTAAGGTAATAAGTGTGTACGTCTTTGT
CTGatataattttctttgaaaaatttaagaaaaaacctCATCTTTTTTGT
TAGAGTTGGGGTGGTAATCGAGGAGGTGGATGGAATGGTCCTGATGGGCG
TAATGGAGGGCCAAGAGGTTATCGTGATCAAGGGCGGAATACTGGTGGTG
GGCGCCATCAACAATTACCACCCGGTCATAAACACGTCTGTGTTGACGTG
CCTTCAAATAAATGTGGTCTTATCATTGGTAAAGGTAGGTGTTTCAAGGG
AACTATTTTTTACGGACTGGATGtatgaaataattgattttgCGGAACTT
ATTCTCACGGTTGACACTCTTAACCACGAAAATTAGCCCCCTAAGGTTCT
GGTGTCAAGAATATTTACTTCATCATACTAGAAATATGtgataataaata
aaaatatgaatGGGCTTAAAAATTAAATGATAATTTCGAGAGTTCGTATC
TTTCGGTGCATTGTTTCACATAAAACGTACTGAtgaggatttttttttaa
atcattattCCGTATCGCAGGTGGCGAAACTTTGAAATTCATCCACCAAG
ATACCAAAGTCTTTATCGAGATTGAACGAAATTCACCTCCAGATGCACCA
ACACGAGTTTTCCATCTCAAAGGTACCTTTTATCTCTCCAATACACCCTA
AAATatattgtttctttttcttttgttttacagCGTACCCTCACTTAAGT
TGAAACACCCACCAACTAAAAAACGCGCAAAACTTTTAAGATACTCCAAT
ATATGTGTGAAGCGATCGTTTTGGACTCCCTGCTTTGGCAATAAAGAAAG
CCCAATTTCTTCGATAAATAAAGAAATAAGTGCAGTTTTCGCAAAGTACG
ATAACtctctttgaaaattttctgtATCGTATAATTCTTGAACCGTTTCT
TTTACGATAACAGGTACGGATGAAATGATCGAAATGGCGCTCCACGAAAT
GAGGGATAAGATCAATGATCAGGTAAAGTTATTCAAGCAAGATGCCACCA
AATCAAAAATGCTCTTTTTAACAAGGATTGTTCAGCAAATGATCTTTCAA
GTGTGGTTTCTCAAGTGGGATAAAGCCTATCAACACCACGAGGGTGAAGA
ACATTGTCAATCTTAGTTCATCACCGGTTATCCCTTTTTAAATTACATGT
TTTAGTTTGATTAAAAGGAATAATCAGTAAAGTCGAGACAGGTCGAGAAA
TGACGATTTAAAATCTTAATCTTAAATTTTAAATGCTTAGaatcaaaaaa
aacttataaCTTTATTATCACGACTATGGAAAAAAGTTTGACAAAAAGGT
TTGGAggttttgctcaatttttttctcGTTCTTTTGCAACATATATTTTT
CTGTTTGCAGAACATCTGCGCCAGACCATTCATGCCACAAGGAGGCGGAC
CGTAAGTCGTCTTCTAAATCTACCCCAATCAATCTTCTTTAATTGAAAGC
CCCTCCCTGTACATTCTACATGTCAAAATTGCAGTGGCTTGATAAGGATG
GTTGGACGTTTATTTGCGAGTTTCTCgagttttctttttattatttaatt
CCCAGTAAATTTGAGATAATATTGAAAAGGTAAGCAGAAAACGGAAAATT
CAACGACAAAATGCttcatttggaaattttttttttcatctcccAGCATT
TTTCGTTCGATATCTGCatattttgtataattttatacatttttttctgT
TATAGTGGCTGGGGTGGCCCAGGAGGTCCTGGGGGACCTGGAGGATGGGG
TAACCAAGGTTGGAATCAAGGAGGAGGCTGGAACCAGGGTGGTGGTTGGA
ATCAACCCCAAGGAGGATGGGGACAAGGTGGATGGAACCAAGGAGGATGG
AATCAACAGCAAGGAGGATGGGGGCAACCTCAACAAGGAGGATGGGGACA
ACAACCCTACCAACAGCAGCAATGGGTAAGTAAGCTATTGCTGCCCGGCC
CTAAGTACCGTGTTGACTACCTCTAATTATGAAGCACTGTCATTTTTTGT
CCGCCTCAAAGGCAATGGTTCAAAACGATAACCTCGTCCGCATAATTTGT
TAACATCTGAAACCTCTATCTATCACTCGAATCAAGAAACCAAATTCTCC
TCTttataacaaagaaaaaattggcAATTAGTTGAATACGAAATTGTTCT
TAGTTTATCGAATGTTAAATTCAATTGCGTAAGCTGTATGTAGTTTGTTC
ATTCGCCAACTATAAACTGCTTTTCGATGCACATTCTAGGGACAGCAATC
GAGCGCTCCCAACACTTCAACGACTACCACCACACCCACAGCCAACCCAG
CAACAGGACAACCCGATTACAGTGCAGCATGGGCGCAATATTATCAACAA
CAGCAGATGTATTACCAACAATATCAATCTACCGCCGCCTCAAGCTCAAC
TACAACGACCACGACCGCCTCATCTGCTTCAGgtacattcttttgtttta
tattgTGATAGAGATTTTTTCGCTGGTTCAACAAATGGTTGACACCCACA
AAGACTCTTTTCGATATCAAGATGGTTCAGGGTGTTTtaagtttgtttaa
aactgGTAGTGAAAGTTGATTCTGTTTGTTCCTGGTCCAAATCAAAACGT
TCTGTCGGCAGCAACTATTAAATTCTCATTGATTATTTCATATGGATTTG
GGCATTTCTGTAACATAATCTGAGGGCTGTCTTTTCTGCCAGGGGTGGCC
ACAACGTTGCATTAAACGAGGTACTTTTAGAGTAAAAGTTTGTAACAAGT
ACTTTCCCTTAAAGAGGACATTTTTCACCATATTAACAGGTGGAGCTCAA
AGCCAATCGATGGAAGAGTACCAGAAGAAACTAGCCGAGTATTACAAGCA
ATACGGACAAGGGGAGGCTGCCAAACCGGAAAAATAAACGGGAATGTGAA
GTGATTGAATGGGAACTGTCGAAAAAGGTGGGTTTATTTCTTTTGCTTTG
AAGTTTGGTACAGAATTGTATAGAAAAATGATTGAGGTTCTCTCTGAATA
AGATTCAAGACTTTTCTGGACCTAATACGATTCAAACGCTGTCACGTTTT
TAGAGAGAATCtcgtatttttttctaaacaattttGTATTACATTTTATA
TTAACAGGTAAGTCTTTCCTTATTACAAAATTATCAAATTACTGTTGTAT
ACTCTCTTGTacgttgttttgtttttcttactCTTGTTGTAGATATTATG
AAGTTCATTCCACTGTATTATGCTGGTGTATTATACTACTATCTACTGTT
ATATTGACTGCATTGATTCCACACTGTTATTACATACATATTACATATGA
TATTATGTCTGATATTACATGTGTTTCTATATTATCCTGTTACACTGCAT
TGTATGCTATTATAAAACTCATTACGCAGGAGGTTTGCTGGATCATGCTA
TGGTGGTATTATGTGTATATAACTTTATGATCTCATTTTTTAAAGTAATA
TTTTGACCCAGCGGGTCGAAATATCGAAGGATTTTTACTTTTACTACATa
ttaaaatgagaaaattttaaacattgatttttcaaatatattttattctt
tctcttttttggaaatgaaaacCAAAACctattcaaaatttacaaacaTT
GGAGAACTTAGCTTCGATCTTTTGAATCCCTCTTTTTACTGTGATCCTGC
TATCTTGAAAACCTCTCTCGCTTGTAAAATTGGGCTTGGTTTTCATTTTC
CATATTTTGTGTAAGCTCGTTCTAAAGGAATtctgttcttaatttctttt
GCTACAGAATGACTGGTAAAATTGTGAGGCTGCAAAGGTGAAATGGTTta
agctttcaaaaaaattaactcgccaaataaaatggtaacgGTATTACATT
TTGAACTGAAAATTTACAAACTGTATTTGCTGAGAGGTTAAACAAGGATG
GCACTTCTTAAAAAGAAGTCTTGTTTTGTCATCTACATATCAGaggaaaa
atttgaattccGGCCTTCCGATTCTTTACATTGAAGAGGCTTCTAATCTA
ATCTAATTCTAATAATTTCCAAGCTGAAAACAAGTAATGAATAATAACCC
TGAGAGTGATAACTTATTAGTGCGATGGAAATCACTTATTTTTATCTTCT
TCTTAGGCTTCCTTGTTTAACCTCGCATCTAAAATCTGTTGATTGTTATC
CAAAACATTTGCTCTGTCCTATTTCACCTGCACGATAATTTTGAATTGCT
AGTCATTACCCTCACACCAAGTATTATagtgcatctttttgaaaatgatt
ctTTAGTATTCCCTAATTATTATCACCTAGTTCGCATTTGAAATTCgcat
tatcatttttcttttgaaaatgattcTTCGGTGTTGccttattatttttc
atttttaacgtTGAATGACCTTATTGAATTGTCTATGTTGTGTGTTGTTG
TTTGTGTTTATTTATTTGAACGAGAAAGTAACATTGAGCAGGAACTGTGT
ATTACAACGCTGGTCGGGCAATATGTGTGCTACGTCTTACTTTGGGATTA
CTGGATTTCCTTCATCTTGTCTACTGGCTTGCCTTGCACATCTACAACGT
ATGATAACTTAGACGGTTTATTTGTTGTTACCATCAAACAGCCTTTATAT
AGTTGATGTTTATATTGAAAGTGTAATTGGTAAGTATATTATTTGCTTCA
CTTTTTATGTCCGTACACTTCGAGGTTCTGTAATTTCTACCGCCCATTGT
AGATTGCAGTTATTGgtttaaataatgttttaatGATTctggtatttttg
aaatttcacagATGATCAACTTGTTACAGAATTTTCAGACTACAACCAAA
TATGTATTCTCGTTTTGAAGAGTTAATATCAATCACGCACAATGCGTTTG
TAAGAACAGTACAAGGTGTTTTTAAGTGTTTTTGGATGATAGGATGTAGT
CATCCATACAGTACGTACGCTAAATTTTCCAATTATTTGACACTCCtttt
gtacgcagagaacattAAACTGACGACATGAAAACAATAgagtacgcttt
tgctaaaaaGCTAACCTATAGGACTCTCTCTCTCTACTTAgtaaatgggc
tcttccagaaaatgtccttATATGGGGGGTGGAGAATATAATGTCCGTGG
GGTAGcggaaaatcatcaaaatttgcttgTATGGGGGTAAATTTTCTCTG
TCccggggtaatttgggttgtccggggggtcaactgatgcttgtccgggg
ggtgaAACCTGTTGCCCGGGAGCAAAagtcactgaaaattgttatatcct
ccactcccccctgatattcattttttttctggaaaagcccaatactaTTC
TTACAAGTGCACACTTGTGTACAGATTTATTTCAGGATTATGACTGCGTC
ATGAGCAGCTGACAAACGATCGTTGGAAAGACATCGAAATCAAACTTATT
TCATAATATATgtactctttaactcgaacaagttttatcgtcccttcagt
taacaatgccttatacatgttttttggacctaccccggtggaggtcctat
aaattaacctgtgtttgttcgtccgttcgtccgtccgttagtctgttacc
aacttttctcaggattgaatcataggaatcttttgatttttggtacaaag
gtgcaaaatggtggtggccaaaatgtgacggagcccgattttcgaaaaaa
aaattttttgggccaatttgggctaaaaaacgggttttttagattttgtg
aaaaattgggtcattgattttttctgattttttgtatgaaagtagggtac
catcataggtaaaagatggctcaagcagatttttgcaaaaaaattttgtt
ggctcaaaaaac

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008265	XLOC_008265	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000198	supercontig	sc0000198:156870..173631 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.3366	4.22132	4.77946	20.87	8.15112	0.0173275	3.4473	0.0649609	2.89434	0.703581	7.72852	4.44014	2.18018	0.0718778	0.107447	0.187837	0.171196	0.0725047	0.0730566	0.206034	0.388884	0.383427	8.71856	0.366057	9.34473	15.9602	0.275468	0.364376	0.361589	0.337738

Blast

[Close]

BLAST of TCONS_00014767 vs. Swiss-Prot (Human)
Match: FUBP3 (Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 2.202e-53
Identity = 139/402 (34.58%), Postives = 213/402 (52.99%), Query Frame = 2

Query:  326 SMLVEEVMIPNKLVGLVIGRGGEMINKLQSESGAKIQVATDPPPEIAAMQTERQVTITGMADNVNKAKSLIDEIRSEGKVPERLLSGGGG----GASEYSTEMLIPSTKVGLVIGKGGETIKSLQERAGCKMVLFQDGEYQQSNEKPLRISGEHNKVMYGKQLVQDLLTQK---ELEAMGKDSNQGMQKTQDGHIYEEFQVPREAVGFVIGTRGSSINNIQQQTGCKVQFK-NEMEGDFKIAMLNGTPQQVQAAKDALVECIQSHSERKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRDQGRNTGGGRHQQLPPGHKHVCVDVPSNKCGLIIGKGGETLKFIHQDTKVFIEIERNSPP--DAPTRVFHLKGTDEMIEMALHEMRDKINDQNICA 1501
            +++ EE  +P+K+VG +IGRGGE I+++Q+ESG KIQ+A++     ++   ER   +TG  +++ +AK L+      G++ +R  +G G      ++    E+LIP++KVGLVIG+GGETIK LQER G KMV+ QDG      +KPLRI+G+  KV   +++V +++ +K   +   +  D N  M     G    E  VPR AVG VIG  G  I  IQ   G ++QFK ++     + A + G P + Q A   + E I +  ER   GG     GR +  G    G                              P G + +   VP++KCGL+IGKGGE +K I+Q +   +E++RN PP  D   R F ++G  + IE+A   + +K+   N+ A
Sbjct:   76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASE-----SSGIPERPCVLTGTPESIEQAKRLL------GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRM-----GGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGA-----------------------------PGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLIDEKVGGTNLGA 432

The following BLAST results are available for this feature:

BLAST of TCONS_00014767 vs. Swiss-Prot (Human)

BLAST of TCONS_00014767 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FUBP3	2.202e-53	34.58	Far upstream element-binding protein 3 OS=Homo sap...	[more]

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TCONS_00014767 (transcript) - C. hemisphaerica