TCONS_00014793 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014793
Unique NameTCONS_00014793
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014793 ID=TCONS_00014793|Name=TCONS_00014793|organism=Clytia hemisphaerica|type=transcript|length=3108bp
ATTAAAGTTAATTTTATTTACTCTTATTTTTCAGTGACAAATTTAAAATg
attaaaagtaaaaatgaGATCCGAGAATAAGATAACATTGATCTCAACAT
GATTTGAAGATCAACAATGGGAAATCTATCTGAGGAGAACGGAGGCATGG
TCACTGTCTCCATATATAATTTGGTGCAAGCATTGGTTGAACCGAATTTC
ATTGAAGAGTACACTTTAAATCATTCTGACACCATATCTGTTTTGAAGAC
AAGGGTTTCTAAATCCCTTCATATCCCTGTAAATGCTTTGTTCTTCTTGA
AGGAGCAACCTGAGGATATAGGGATAGTTGTAGCACCAATCCTTGATAAA
ACGGAGCTATCTCACTTTTTAAGGGAGAACGAAGATTCAAGAGGTATTAG
ATTATTTCTTGGTGCGTTCGATTTGGAAGGAATAATTAATGAGGAAGTCA
AACTTCGTCATCAGGAGCTTTACGATATTCCATTTTTATGTGGTTATGTA
CTCAGGAGTTTTGGGTCAGGAAATGTTATAGGTTTTATTAAAGAGAAAGA
TATAACTGTCGCtgaaattaaaagttttgttgAAGAAGTGACACAGCTAC
CGATCAACTGTCAAAAATTGTTGNAAGTTTTGTTGAAGAAGTGACACAGC
TACCGATCAGTTgtcaaaaattgttgaaaagtgATTCTAAAGAGGTTTCT
GATTGGGCACTGGCTCTTTCTATGGAGGATGAATGGGCGCGATCTATTTA
TGTTGTTTGTACAAATAATGAGCATGAGGAAATTTGCTTGGGGTACGGCA
TCAAATTATTCAAGAAACTTCAACTCAAATTGTTGACCAAGGTTGAGGAT
TTGAACCCAAGTCAATTTGAACGAGTAGATGACGTCAAGAGATTTATCGC
AGAGAATCATGGGATACGAGAATACAATCAGCAACTTTTACATAAAGGGG
TTGTATTGGAGACGAACGATTTTATTTATGATCTATTTTTGAAGGACAAT
TCGATGGATGTTATGAGTTTAAGTTTGGTGGTTATAGAAGGAACTTTTGA
AATCATTATATCACCAGGCCAAAGTTACGGTGAAGAATATATGGATTTTC
CGCTTACGATAACAGATTCCACAACGATTTCTAAAGTTAAAGATAACATT
AAAGAGACTATCAATATCTCGCCGAAATCTTTCACATTGAAGAAAGATGG
AGTCGAAAGTATAGACGAGGATGGTGAGAAGTCAGTCGTTGATTTTGTTG
ACAGTATGTATTcgttattcttttattttgctttgattCATGTGCGAATT
CGTTTCACTAAATGTACTGATAAGATTGAGGAGTTTACCGAAACTTTGAG
CCATGGAAATCCATTTAAAACACTGAAGGTTTTCACAAAAGAAATTCGta
aaaaatatcatttgaaGAAAAGCGAATTGAAATACATCCCTTCGGATTGT
GATGTGCATTTAACGGATAGAGAGGTTTTGGATAGCAGGATGTTGattga
tttttggaaaagtaAGATTTGTTTACTGGAATTTGAAAGCAATAAAAATA
TCGATGGAAAATGTTCTTTGATGTGATTATGATATCTTATACAGAAAAAT
AATCAAGTTGCGAACAAAATTCTGTCCTCGGGTGTTCGTTACcattaacc
ctttcagtcccaagGCTTttgcactttaaaaaaaaaaatcaaaaaattcg
cGCTCAGCAAGACATCGGTTGAGAGGTAAGGGCGCTCCGAAATCAaccta
ttttctttaaaatttgatgctctTGCTAATGGTAGCTACGAGAGCACCAG
AAATTACTTAGTTCTGGAGATTACTTAGTTCCGGAGATATAGTCCGGTGA
AGTTTGTTAACGCTGGTCTCTGGGGCTGAAATGGttaaaaagattacatc
atttaGACATATATATTATTTATTGTGTTCCGTATTATTTGCACATACAA
TCACTTctataatatattttgaatcagtatttttgtaattttaatatTGT
TATGTTTATTGTATTAAAAATTTCTCTACTAAACTTTTGCACCTCTACCA
AGCCAAGAGACTGGGTTAGAGTTTATTGTCTCACTTTGTGATATATTTTG
AAtcagtatttttgtaattttgatattattgtttttattatattaaaaat
ttcgtcactccGCTGTTGCACCTCTACCAAGCCAATAGACTGGGTTAGAG
TTTATTGTATCActtttataatatattattatccatatagcggtcattaa
gtaagctaTTAAAGGTTCAATCGGCGGGCGGTATTTAAAGAGTTTGTGAC
TCAAATTCTCATACCTGTGCTGAGGAAACTAAAGCGCCAGGcctcagagg
gctgaaatatcattaaccgcccgggtatagggcaataacgtcatttgcgg
cccgctcggaattggattaaagtcgttgcattgaagcgaagagactaaaa
taacgtcagaaaaaaaacatattttggtcatttgcggcccgctcgcaagg
tgctaaaaatttgttgaagagattgcattgaagcgaaaagacttggttga
cattagaaaaaaaacgttgtttgaatgtccgctatgaataataatagtaa
tagcgttaagttttcgttcgttgttgcattaattctgcccttgcagtttg
attattagccctctagtgccatttgcgccctccgcttcgcgtcgggctca
aatgacactatcgggcgaaaaatcaaactacgcgggcagaaaataaaaac
aacgacctcaaactgaacgctattgttatattttgaatcagcatttttgt
aattttaatatTGTCATGtttattattttaaaagtttctctaCTCCACAT
TTGCACCTCTACCAAGCCAATAGACTGGGTTAGAGTTTATTGTATCactt
ttataatatattttgaatcagtatttttgtaattttgatattattgtttt
tattatattaaaaatttcTCCACTCCACTGTTGCACCTCTACCAAGCCAA
GACACTGGGTTAGAGTTTATTGTATCacttttataatatattttgaatca
gtatttttgtaattttgatattGTTATGTTTATTATATTAAAATTTCTCC
ACTCCACT
Run BLAST on NCBI

protein sequence of TCONS_00014793-protein

>TCONS_00014793-protein ID=TCONS_00014793-protein|Name=TCONS_00014793-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MEDEWARSIYVVCTNNEHEEICLGYGIKLFKKLQLKLLTKVEDLNPSQFE
RVDDVKRFIAENHGIREYNQQLLHKGVVLETNDFIYDLFLKDNSMDVMSL
SLVVIEGTFEIIISPGQSYGEEYMDFPLTITDSTTISKVKDNIKETINIS
PKSFTLKKDGVESIDEDGEKSVVDFVDSMYSLFFYFALIHVRIRFTKCTD
KIEEFTETLSHGNPFKTLKVFTKEIRKKYHLKKSELKYIPSDCDVHLTDR
EVLDSRMLIDFWKSKICLLEFESNKNIDGKCSLM
Run BLAST on NCBI

transcript from alignment at sc0000198:383110..390897+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014793 ID=TCONS_00014793|Name=TCONS_00014793|organism=Clytia hemisphaerica|type=transcript|length=7788bp|location=Sequence derived from alignment at sc0000198:383110..390897+ (Clytia hemisphaerica)
ATTAAAGTTAATTTTATTTACTCTTATTTTTCAGTGACAAATTTAAAATg attaaaagtaaaaatgaGATCCGAGAATAAGATAACATTGATCTCAACAT GATTTGAAGATCAACAATGGGAAATCTATCTGAGGAGAACGGAGGCATGG TCACTGTCTCCATATATAATTTGGTGCAAGCATTGGTTGAACCGAATTTC ATTGAAGAGTACACTTTAAATCATTCTGACACCATATCTGTTTTGAAGAC AAGGGTTTCTAAATCCCTTCATATCCCTGTAAATGCTTTGTTCTTCTTGA AGGAGCAACCTGAGGATATAGGGATAGTTGTAGCACCAATCCTTGATAAA ACGGAGCTATCTCACTTTTTAAGGGAGAACGAAGATTCAAGAGGTATTAG ATTATTTCTTGGTGCGTTCGATTTGGAAGGAATAATTAATGAGGAAGTCA AACTTCGTCATCAGGAGCTTTACGATATTCCATTTTTATGTGGTTATGTA CTCAGGAGTTTTGGGTCAGGAAATGTTATAGGTTTTATTAAAGAGAAAGA TATAACTGTCGCtgaaattaaaagttttgttgAAGAAGTGACACAGCTAC CGATCAACTGTCAAAAATTGTTGNAAGTTTTGTTGAAGAAGTGACACAGC TACCGATCAGTTgtcaaaaattgttgaaaagtgATTCTAAAGAGGTTTCT GATTGGGCACTGGCTCTTTCTATGGAGGATGAATGGGCGCGATCTATTTA TGTTGTTTGTACAAATAATGAGCATGAGGAAATTTGCTTGGGGTACGGCA TCAAATTATTCAAGAAACTTCAACTCAAATTGTTGACCAAGGTTGAGGAT TTGAACCCAAGTCAATTTGAACGAGTAGATGACGTCAAGAGATTTATCGC AGAGAATCATGGGATACGAGAATACAATCAGCAACTTTTACATAAAGGGG TTGTATTGGAGACGAACGATTTTATTTATGATCTATTTTTGAAGGACAAT TCGATGGATGTTATGAGTTTAAGTTTGGTGGTTATAGAAGGAACTTTTGA AATCATTATATCACCAGGTATGTGATCCTTCACTTCAGTCGAGATGAGTA TAACAGATTagacaatattttataaatctaaaattatttcgtagaggtcg attgATCTGTGAAATCAAATTCTATGAATAATAAAGAATAAgagtatttg gtactttgcagACTGGTCTGTACCTGCCGGAACTCAAAAACTAATGGAAC TcttcatttgaaattttcaccagtggTAGATATTAACAATCTAGGGTAGT GTGCAAAATCTTATTTTGGTCACTTGAGTGGTTGGCATTTGAATTGCCTC ACAAAATTAGAGCAATAATTATAACGTCATCAGATggctatgacgtcatc aacgatgccaaaaattcatatttcaAGTCAGTTagataaatatttaaaaa tgttgtaaaaaatgtttttttttggacctacctccgggtgccccggtgga ggtcctataaattaacccatgtccgttcgttcgttcgttcgtctgtccgt CTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtatagctt ttaacaatgttgactcattatttttttctgattttttgcacaatgatgca aaatggcaatgcctaaaatgtgacggagccagactttcgaaaaaaaatat atttgggcaaatttgggccaaaaactgcctaaaatagggttatttggact ttgtgcaaaatcctgttattacttttttctgattttttgtacaaagatgg agggcaagattctctaaagaatgactgaagtggtttttcccgNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaattcttattcgccttaaaa gacggattttcgtattttggggaaattccctttaaccaaataagaaaata tagcttttctcaatgttgactcataattctttctgattttttgcacaatg atgcaaaatggcaatgcccaaaatgtgacgaagccagatttttaaggaaa ataattttgggCAAAGTTGGGctaaaaacagcttaaaaggttttttgggc ctgaatggttcaagtgattttcgtatttggggaaattcctttttaccatt ttacattattcaacacacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccctca agaTGCTCTAACTGTTAATAAGACAGATCCtgaattttcttccattttag GCCAAAGTTACGGTGAAGAATATATGGATTTTCCGCTTACGATAACAGAT TCCACAACGATTTCTAAAGTTAAAGATAACATTAAAGAGACTATCAATAT CTCGCCGAAATCTTTCACATTGAAGAAAGATGGAGTCGAAAGTATAGACG AGGATGGTGAGAAGTCAGTCGTTGATTTTGTTGACAGTATGTATTcgtta ttcttttattttgctttgattCATGTGCGAATTCGTTTCACTAAATGTAC TGATAAGATTGAGGAGTTTACCGAAACTTTGAGCCATGGAAATCCATTTA AAACACTGAAGGTTTTCACAAAAGAAATTCGtaaaaaatatcatttgaaG AAAAGCGAATTGAAATACATCCCTTCGGATTGTGATGTGCATTTAACGGA TAGAGAGGTTTTGGATAGCAGGATGTTGattgatttttggaaaagtaAGA TTTGTTTACTGGAATTTGAAAGCAATAAAAATATCGATGGAAAATGTTCT TTGATGTGATTATGATATCTTATACAGAAAAATAATCAAGTTGCGAACAA AATTCTGTCCTCGGGTGTTCGTTACcattaaccctttcagtcccaagGCT TttgcactttaaaaaaaaaaatcaaaaaattcgcGCTCAGCAAGACATCG GTTGAGAGGTAAGGGCGCTCCGAAATCAacctattttctttaaaatttga tgctctTGCTAATGGTAGCTACGAGAGCACCAGAAATTACTTAGTTCTGG AGATTACTTAGTTCCGGAGATATAGTCCGGTGAAGTTTGTTAACGCTGGT CTCTGGGGCTGAAATGGttaaaaagattacatcatttaGACATATATATT ATTTATTGTGTTCCGTATTATTTGCACATACAATCACTTctataatatat tttgaatcagtatttttgtaattttaatatTGTTATGTTTATTGTATTAA AAATTTCTCTACTAAACTTTTGCACCTCTACCAAGCCAAGAGACTGGGTT AGAGTTTATTGTCTCACTTTGTGATATATTTTGAAtcagtatttttgtaa ttttgatattattgtttttattatattaaaaatttcgtcactccGCTGTT GCACCTCTACCAAGCCAATAGACTGGGTTAGAGTTTATTGTATCActttt ataatatattattatccatatagcggtcattaagtaagctaTTAAAGGTT CAATCGGCGGGCGGTATTTAAAGAGTTTGTGACTCAAATTCTCATACCTG TGCTGAGGAAACTAAAGCGCCAGGcctcagagggctgaaatatcattaac cgcccgggtatagggcaataacgtcatttgcggcccgctcggaattggat taaagtcgttgcattgaagcgaagagactaaaataacgtcagaaaaaaaa catattttggtcatttgcggcccgctcgcaaggtgctaaaaatttgttga agagattgcattgaagcgaaaagacttggttgacattagaaaaaaaacgt tgtttgaatgtccgctatgaataataatagtaatagcgttaagttttcgt tcgttgttgcattaattctgcccttgcagtttgattattagccctctagt gccatttgcgccctccgcttcgcgtcgggctcaaatgacactatcgggcg aaaaatcaaactacgcgggcagaaaataaaaacaacgacctcaaactgaa cgctattgttatattttgaatcagcatttttgtaattttaatatTGTCAT GtttattattttaaaagtttctctaCTCCACATTTGCACCTCTACCAAGC CAATAGACTGGGTTAGAGTTTATTGTATCacttttataatatattttgaa tcagtatttttgtaattttgatattattgtttttattatattaaaaattt cTCCACTCCACTGTTGCACCTCTACCAAGCCAAGACACTGGGTTAGAGTT TATTGTATCacttttataatatattttgaatcagtatttttgtaattttg atattGTTATGTTTATTATATTAAAATTTCTCCATTCCACTGTTGCACCT CTACCAAGCCAAGACACTGGGTTAGAGTTTATTGTATCacttttataata tattttgaatcagtatttttgtaattttgatattGTTATGTTTATTATAT TAAAATTTCTCCATTCCACTGTTGCACCTCTACCAAGCCAAGACACTGGG TTAGAGTTTATTGTATCACTTTGTGATGTATTTTGAAtcagtatttttgt aattttattatTGTCATGtttattatattaaaaatttcTCCATTCCACTG TTGCACCTCTACCAAGCCAATAGACTGGGTTAGAGTTTATTGTATCACTT TGTGATGTATTTTGAAtcagtatttttgtaattttaatattattgttttt attttttaaaaatttctccaCTCCACTGTTGCAACTCTACCAAGCCAAGA GACTGGGTTAGAATTTATTGTATCacttttataatatattttgaatcagt atttttgtaattttgatattgttatgtttattatattaaaaatttcTCCA CTCCACTGTTCCACCTCTACCAAGCCAAGAGACTGGGTTAGAGTTTATTG TATCACTTTGTGATATACTAgtatcagtatttttgttattctcaacttca gttgagctataatctgagaatgtctgtatgtatgtctgtatgtatgtatg tatgtccgtccgaaaactttagggcaggctggacacttcaaaaaagattt ggatgaaatttggcacacttgttccttgggtgaatatctgggggtgtttt ttttcatttttcaaaatttttgatttttggggcctggggacgagNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgccaaaacgaggc taagattttggggcagcctggagacttcaaaaattgttcgatctggctga aattttgcacacttgttccttgggtgaaaatctgggggtttttttttcat ttttcaaaaattttgatttttggggcctggggacgagtttttcgccaaaa cgaggctaaaattttggggcagcctggagacttcaaaaattgttcgagcT GGCTgcaattttgcacacttgctcCTTGGGTGAAAATCTGGggggttttt tttcatttttcaaaaattttgatttttggggcctggggacgagtttttcg ccaaaacgaggctaagcttttggggcagcctggagacttcaaaaattgtt cgagcTGGCTgcaattttgcacacttgctcCTTGGGTGAAAATCTGGggg gttttttttcatttttcaaaaattttgatttttggggcctggggacgagt ttttcgccaaaacgaggctaagcttttggggcagcctggagacttcaaaa attgttcgagcTGGCTgcaattttgcacacttgctcCTTGGGTGAAAATC TGGggggttttttttcatttttcaaaaattttgatttttggggcctgggg acgagtttttcgccaaaacgaggctaagcttttggggcagcctggagact tcaaaaattgttcgagcTGGCTgcaattttgcacacttgctcCTTGGGTG AAAATCTGGggggttttttttcatttttcaaaaattttgatttttggggc ctggggacgagtttttcgccaaaacgaggctaagcttttggggcagcctg gagacttcaaaaattgttcgagcTGGCTgcaattttgcacacttgctcCT TGGGTGAAAATCTGGggggttttttttcatttttcaaaaattttgatttt tggggcctggggacgagtttttcgccaaaacgaggctaagcttttggggc agcctggagacttcaaaaattgttcgagcTGGCTgcaattttgcacactt gctcCTTGGGTGAAAATCTGGggggttttttttcatttttcaaaaatttt gatttttggggcctggggacgagtttttcgccaaaacgaggctaaaattt cTCCATTCCACTGTTGCACCTCTACCAAGCCAAGAGACTGGGTTAGAGTT TATTGTATCacttttataatatattttgaataagtatttttgtaatttta atatTGTTATGtttattatattaaaaatttcGCCACTCCACTTTTGCACC TCTACCAAGCCAAGAGACTGGGTTAGAGTTTATTGTATCACTTTTATAAT AAATTCNAAtcagtatttttgtaattttgatattGTTATGTTTATTATAT TAAAATTTCTCCATTCCACTGTTGCACCTCTACCAAGCCAAGACACTGGG TTAGAGTTTATTGTATCacttttataatatattttgaatcagtatttttg taattttgatattGTTATGTTTATTATATTAAAATTTCTCCATTCCACTG TTGCACCTCTACCAAGCCAAGACACTGGGTTAGAGTTTATTGTATCactt ttataatatattttgaatcagtatttttgtaattttgatattgttatgtt tattatattaaaaatttcTCCACTCCACTGTTCCACCTCTACCAAGCCAA GAGACTGGGTTAGAGTTTATTGTATCacttttataatatattttgaataa gtatttttgtaattttgatattattgtttttattatattaaaaatttcgt cactccGCTGTTGCACCTCTACCAAGCCAAGAGACTGGGTTAGAGTTTAT TGTATCacttttataatatattttgaataagtatttttgtaattttgata ttATTGTATTTATTATATTAAATTTTCTACACTCCACT

Coding sequence (CDS) from alignment at sc0000198:383110..390897+

>TCONS_00014793 ID=TCONS_00014793|Name=TCONS_00014793|organism=Clytia hemisphaerica|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000198:383110..390897+ (Clytia hemisphaerica)
ATGGAGGATGAATGGGCGCGATCTATTTATGTTGTTTGTACAAATAATGA
GCATGAGGAAATTTGCTTGGGGTACGGCATCAAATTATTCAAGAAACTTC
AACTCAAATTGTTGACCAAGGTTGAGGATTTGAACCCAAGTCAATTTGAA
CGAGTAGATGACGTCAAGAGATTTATCGCAGAGAATCATGGGATACGAGA
ATACAATCAGCAACTTTTACATAAAGGGGTTGTATTGGAGACGAACGATT
TTATTTATGATCTATTTTTGAAGGACAATTCGATGGATGTTATGAGTTTA
AGTTTGGTGGTTATAGAAGGAACTTTTGAAATCATTATATCACCAGGCCA
AAGTTACGGTGAAGAATATATGGATTTTCCGCTTACGATAACAGATTCCA
CAACGATTTCTAAAGTTAAAGATAACATTAAAGAGACTATCAATATCTCG
CCGAAATCTTTCACATTGAAGAAAGATGGAGTCGAAAGTATAGACGAGGA
TGGTGAGAAGTCAGTCGTTGATTTTGTTGACAGTATGTATTcgttattct
tttattttgctttgattCATGTGCGAATTCGTTTCACTAAATGTACTGAT
AAGATTGAGGAGTTTACCGAAACTTTGAGCCATGGAAATCCATTTAAAAC
ACTGAAGGTTTTCACAAAAGAAATTCGtaaaaaatatcatttgaaGAAAA
GCGAATTGAAATACATCCCTTCGGATTGTGATGTGCATTTAACGGATAGA
GAGGTTTTGGATAGCAGGATGTTGattgatttttggaaaagtaAGATTTG
TTTACTGGAATTTGAAAGCAATAAAAATATCGATGGAAAATGTTCTTTGA
TGTGAATGGAGGATGAATGGGCGCGATCTATTTATGTTGTTTGTACAAAT
AATGAGCATGAGGAAATTTGCTTGGGGTACGGCATCAAATTATTCAAGAA
ACTTCAACTCAAATTGTTGACCAAGGTTGAGGATTTGAACCCAAGTCAAT
TTGAACGAGTAGATGACGTCAAGAGATTTATCGCAGAGAATCATGGGATA
CGAGAATACAATCAGCAACTTTTACATAAAGGGGTTGTATTGGAGACGAA
CGATTTTATTTATGATCTATTTTTGAAGGACAATTCGATGGATGTTATGA
GTTTAAGTTTGGTGGTTATAGAAGGAACTTTTGAAATCATTATATCACCA
GGCCAAAGTTACGGTGAAGAATATATGGATTTTCCGCTTACGATAACAGA
TTCCACAACGATTTCTAAAGTTAAAGATAACATTAAAGAGACTATCAATA
TCTCGCCGAAATCTTTCACATTGAAGAAAGATGGAGTCGAAAGTATAGAC
GAGGATGGTGAGAAGTCAGTCGTTGATTTTGTTGACAGTATGTATTcgtt
attcttttattttgctttgattCATGTGCGAATTCGTTTCACTAAATGTA
CTGATAAGATTGAGGAGTTTACCGAAACTTTGAGCCATGGAAATCCATTT
AAAACACTGAAGGTTTTCACAAAAGAAATTCGtaaaaaatatcatttgaa
GAAAAGCGAATTGAAATACATCCCTTCGGATTGTGATGTGCATTTAACGG
ATAGAGAGGTTTTGGATAGCAGGATGTTGattgatttttggaaaagtaAG
ATTTGTTTACTGGAATTTGAAAGCAATAAAAATATCGATGGAAAATGTTC
TTTGATGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008275XLOC_008275Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014793-proteinTCONS_00014793-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014793-exon-sc0000198-1491911889:383110..384176TCONS_00014793-exon-sc0000198-1491911889:383110..384176Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1510915933:383110..384176TCONS_00014793-exon-sc0000198-1510915933:383110..384176Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1575043694:383110..384176TCONS_00014793-exon-sc0000198-1575043694:383110..384176Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1491911889:386010..388042TCONS_00014793-exon-sc0000198-1491911889:386010..388042Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1510915933:386010..388042TCONS_00014793-exon-sc0000198-1510915933:386010..388042Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1575043694:386010..388042TCONS_00014793-exon-sc0000198-1575043694:386010..388042Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1491911889:390890..390897TCONS_00014793-exon-sc0000198-1491911889:390890..390897Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1510915933:390890..390897TCONS_00014793-exon-sc0000198-1510915933:390890..390897Clytia hemisphaericaexon
TCONS_00014793-exon-sc0000198-1575043694:390890..390897TCONS_00014793-exon-sc0000198-1575043694:390890..390897Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000198supercontigsc0000198:383110..390897 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.68122e-07 0 0 0 0.607761 1.09349 2.88207 0.532314 0.705931 0 0.115165 0.553352 0.471105 0.00396849 0.455831 5.42087e-05 2.06174 0.756281 1.34404 0.996521 1.05167 3.83689 1.97012 0.600475 3.51732 2.1028 0 0 1.04373 1.28801
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014793 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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