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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015093 ID=TCONS_00015093|Name=TCONS_00015093|organism=Clytia hemisphaerica|type=transcript|length=3404bp
GTTAAAGTGAATTATGCTGTAGGTGTTATCGTCGTCGAGGTGTTCGTTTA
GGATCTTGTTAATGTAATCTTGTCTGTTAAGAATTACGATGCCCCCTCCT
TTATCAGCTTTCTTTATAATGATGTCATGCATGGTTGTTCTTTAGTCGAC
GAAAAGGAATTAAAAAGTGGAGGTTGTCGTTTTGCGTTTGGCCATCACCG
AAAGGAAGAAATTGTATGTTTTGAAGTTCGTCGAAGAATTGGTTGATGAT
AGGGTAATCAGATGGTGGGGGTATCCAGTTGCTGGGGCCTTTTGAGGGTA
GTTGTTTGGTGCgtgtttgattattttcttgatCTTGATTTTGTGGTTGT
TCTTGATTTTGTCGTTGGGCAGGATTGATGTTGTTGTGGTTAGGTGGGTT
AAAATGGAGAGTAGTGTTGATTCTTTTCTTGAGGGATTGGATGACTTCAT
TGGGGTTGGATTGGCGTTTAAACGATGGCATGTTGGGTAATTGAGGCCTT
TTGATAGGAAACTGGTTTCTTGTGGGGACAGTTGGTATAGTTTGATAAAT
TGTGGACGAGTTGATTGTTGTAATCCTGCGTGAATTCGTGTATGACTTTT
CTTCAATTTCCAATGTTTCGATGTTGGAAACAGGTCGTGGAGGGTAGGGG
TTTTGTATCCACGGATTTGGTTTTTTTGATTCTCTGCATGTTGGCTGTGG
ACAAAAGAGAGAGAAGATAAGATAATGTTGTGGTAAGGGGGTGAGTGTTC
CTGTGTTTACAATCTTGGAAATTAGCTGAATGAGAGTAGAAAGATCAGAA
GACTTGGTGGAGAGGCAGGTAGTAATGTGTTTAGAATGAGATATATTCAA
TACTGGTTGTCCTTGTGCTCCCAATCCCTGATTAGGTAGGATGAGCTTGA
GTAGTTGATGTTCATGTAGAAATCTAAGTCTAGGGAATTAAAGGTCAAGA
TATCAGGTTTGAAGTGTGGTTGcggaaagtgaaaaataaatccAATGGTT
GAGATGATGGAGAGTTATTGTGTAATGAAGGCAATGGTATATATGatgat
ttgaaaacaaaatagaTTTTTTCCTTTATATTTATATAATGTTATTATAT
ATTATTACAACAGAATGGATTTAAGACAAATTTATGTTCAGATAAGAATG
ATTTGTATACAGGTTCATTGTTCTGGATTGTGGGGTGTTCCATTGATTTT
CATGTATCGTTGAAAGTAAATGTCATAATAGTACCAGTGATGACCCTTTT
TATCAAGGTTGTTGCTGATCCATCTAATTTGGTCAAAGCGTTTGTTAATT
TTGTCATGTCGACGGAAATGAGTACTGTAGATGTATGAAAACAGGAGTTC
AGGTGATCCGCCATTGCCATAAAAGAAAGTCATCAGTTTGAATGTCGAGG
TGTCAGATGTGGGTGTTTCTTGAAAGCATCTGACAATGTTTGTGGGCCAT
GTGTTGATTGGAAAGAAGGCTTGACCATCAATATCATCCGTTATTGAGAG
TCGTTCTTTCTCGTCCACTACTGCATGAAAGTGGTTCTTAGTGGCACGAT
GTCGAAAGGAATTTGCTTATGTGGGGTAGTCCATTCTGAAATAGGATAGT
AAGTAAGTATAAAAAGATGAGTTGTTATACTACATCCAAGCTGTCAGAGG
CAGAGAAGATTGGTAGATGTGTATCTGGATTGTAGAGCATGGGTGTGTGA
GTATGAGTGTCTTAATGACGCAAAAGTAAGAAAGAGAGATATTTGTTGAA
ATCAGTTTTCAATTCTGGCAAGTTGAGTAGAAATTATGGCAAGGAAGGTG
TGGTTATTGTGGTTCATGGGTATGGAGAGTGAGAAATTAAGGAACCAAAT
GGAAATCTAGTGTACTGTAATGAGAATCCGGAAAATGAGGGATGAGAGCA
AAGGATTAGGAGCTGTTTATTTTGTGAAACCATTTTATTGTGAATTAAAT
ATTATCATGACAAATGTTAATAATAATTATagatatttttaattaatttt
atagcAGAAAGTGTTGTGACTAGGGGCGCATCCTTCGTAGCATTTCCACA
GCCTCAAGGTTGATTTTATGTTGGATATAAGTTGTGACGCGTTGAATATT
TTGTGGAGGTGTTGGTGATAGAAAATTGAATGCTGATGGTATGTATTTGT
AGTGTGAAGTTGGTTGATCTATGTGGGTAGGTTGGATTTTGGAGATGCTG
TATTTGGGATTGGAAATAGTGGAGTGAGTTGTCCGCCGGGGATCAATGAA
TTTTTTAGGTGGTTCGGGCTGCAATATGTGCAAGTCAGGTGATTTGGAAG
GTGACTTGATGTTTGGGTCTGGGAGGTTGTGGGGAAAGCATCATTGTTGT
TGGTTGGTCAAGTTTCCAATGGAGTCGTTCAGATGGTCTTGGGAGGGTTG
GCTGGATGTTGTGGTTTTATAAGGAGTGACAAATTTCATCTGGCGTCGTC
GTTTGGGTTTGTGGGTAAGTGGGTGGTATCCGGTAGTTAAGTTGGTGTTC
TCTTTGTTGCTTTGTTGGTTGAGAGACATCTGAAGGGAGAAAGATAGGTT
GCAAGGTTATATATAAAATGTAGTGTCCTTGTGTGCAGAGTTCCGAAGTT
ACGCGTGCTTTGATTACTTGACTGTTATATTAGTGTTTTTAAATAATCTT
AAACTTTTGAGTGTATTATAATTACGTCTTTTATTTGGCATCTTGGATTA
TGGTAGAGTTGAAGAGTGTCAAAATAGAGACAAAGAGGTACATGAGACAA
CCCTTGGTGCATCTGTTGTTTTTTGAATATGGCTAATGAACGTTGAGTAT
AAATTTTTGGGAAACTATTGGTTAACAGAatgtctgtttgtttgttttca
tcaaaaatataaGATGGTTTAGGATTTTGTTGCGAGGAAAGTTGGCTGTA
AAAAGTATAAATTGAATGTGATGTCTTCTTAGGAACATTAGTCGTATCTG
TATCAGATTATATATATGTTGGATGAAAAGTATAAATTTTATTAGGAAAA
TAATAAGTTGATTCATATTAGTCACGTATCACTGGATTTTGGTATCTGCG
TGATATTTCTTATACTTGGCAATAAGGATTTGATTACTGTGTATTTTGAG
AGGAAAATGGATGGATTTTTGTGAGCCATGTTCCCCAAGGAAATTTGTTT
TAGTTGGAGAATGGCTGGATTTAGTATGATCTTTCGTTTTGATATGAGTG
TACTTTTTGATATATTTGTTATCTATTAAATTGTACGTTTTGGTTTTTAA
TCAGTAGTTTCAGGTATGtcaaaatgatatatttgatCGCGTGTTTTCGT
TTTTTCCGAGAAAGATTTGGAATATTGCGTATTAAATGAATTGCAAATAA
AATTTTCCATAAAATTTCTTCGTTTGGTCTGGGTTTAGAATAAAAGTTGA
CGTT Run BLAST on NCBI protein sequence of TCONS_00015093-protein >TCONS_00015093-protein ID=TCONS_00015093-protein|Name=TCONS_00015093-protein|organism=Clytia hemisphaerica|type=polypeptide|length=118bp
MPSFKRQSNPNEVIQSLKKRINTTLHFNPPNHNNINPAQRQNQEQPQNQD
QENNQTRTKQLPSKGPSNWIPPPSDYPIINQFFDELQNIQFLPFGDGQTQ
NDNLHFLIPFRRLKNNHA Run BLAST on NCBI transcript from alignment at sc0000203:329246..332649 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015093 ID=TCONS_00015093|Name=TCONS_00015093|organism=Clytia hemisphaerica|type=transcript|length=3404bp|location=Sequence derived from alignment at sc0000203:329246..332649 (Clytia hemisphaerica)
AACGTCAACTTTTATTCTAAACCCAGACCAAACGAAGAAATTTTATGGAA
AATTTTATTTGCAATTCATTTAATACGCAATATTCCAAATCTTTCTCGGA
AAAAACGAAAACACGCGatcaaatatatcattttgaCATACCTGAAACTA
CTGATTAAAAACCAAAACGTACAATTTAATAGATAACAAATATATCAAAA
AGTACACTCATATCAAAACGAAAGATCATACTAAATCCAGCCATTCTCCA
ACTAAAACAAATTTCCTTGGGGAACATGGCTCACAAAAATCCATCCATTT
TCCTCTCAAAATACACAGTAATCAAATCCTTATTGCCAAGTATAAGAAAT
ATCACGCAGATACCAAAATCCAGTGATACGTGACTAATATGAATCAACTT
ATTATTTTCCTAATAAAATTTATACTTTTCATCCAACATATATATAATCT
GATACAGATACGACTAATGTTCCTAAGAAGACATCACATTCAATTTATAC
TTTTTACAGCCAACTTTCCTCGCAACAAAATCCTAAACCATCttatattt
ttgatgaaaacaaacaaacagacatTCTGTTAACCAATAGTTTCCCAAAA
ATTTATACTCAACGTTCATTAGCCATATTCAAAAAACAACAGATGCACCA
AGGGTTGTCTCATGTACCTCTTTGTCTCTATTTTGACACTCTTCAACTCT
ACCATAATCCAAGATGCCAAATAAAAGACGTAATTATAATACACTCAAAA
GTTTAAGATTATTTAAAAACACTAATATAACAGTCAAGTAATCAAAGCAC
GCGTAACTTCGGAACTCTGCACACAAGGACACTACATTTTATATATAACC
TTGCAACCTATCTTTCTCCCTTCAGATGTCTCTCAACCAACAAAGCAACA
AAGAGAACACCAACTTAACTACCGGATACCACCCACTTACCCACAAACCC
AAACGACGACGCCAGATGAAATTTGTCACTCCTTATAAAACCACAACATC
CAGCCAACCCTCCCAAGACCATCTGAACGACTCCATTGGAAACTTGACCA
ACCAACAACAATGATGCTTTCCCCACAACCTCCCAGACCCAAACATCAAG
TCACCTTCCAAATCACCTGACTTGCACATATTGCAGCCCGAACCACCTAA
AAAATTCATTGATCCCCGGCGGACAACTCACTCCACTATTTCCAATCCCA
AATACAGCATCTCCAAAATCCAACCTACCCACATAGATCAACCAACTTCA
CACTACAAATACATACCATCAGCATTCAATTTTCTATCACCAACACCTCC
ACAAAATATTCAACGCGTCACAACTTATATCCAACATAAAATCAACCTTG
AGGCTGTGGAAATGCTACGAAGGATGCGCCCCTAGTCACAACACTTTCTg
ctataaaattaattaaaaatatctATAATTATTATTAACATTTGTCATGA
TAATATTTAATTCACAATAAAATGGTTTCACAAAATAAACAGCTCCTAAT
CCTTTGCTCTCATCCCTCATTTTCCGGATTCTCATTACAGTACACTAGAT
TTCCATTTGGTTCCTTAATTTCTCACTCTCCATACCCATGAACCACAATA
ACCACACCTTCCTTGCCATAATTTCTACTCAACTTGCCAGAATTGAAAAC
TGATTTCAACAAATATCTCTCTTTCTTACTTTTGCGTCATTAAGACACTC
ATACTCACACACCCATGCTCTACAATCCAGATACACATCTACCAATCTTC
TCTGCCTCTGACAGCTTGGATGTAGTATAACAACTCATCTTTTTATACTT
ACTTACTATCCTATTTCAGAATGGACTACCCCACATAAGCAAATTCCTTT
CGACATCGTGCCACTAAGAACCACTTTCATGCAGTAGTGGACGAGAAAGA
ACGACTCTCAATAACGGATGATATTGATGGTCAAGCCTTCTTTCCAATCA
ACACATGGCCCACAAACATTGTCAGATGCTTTCAAGAAACACCCACATCT
GACACCTCGACATTCAAACTGATGACTTTCTTTTATGGCAATGGCGGATC
ACCTGAACTCCTGTTTTCATACATCTACAGTACTCATTTCCGTCGACATG
ACAAAATTAACAAACGCTTTGACCAAATTAGATGGATCAGCAACAACCTT
GATAAAAAGGGTCATCACTGGTACTATTATGACATTTACTTTCAACGATA
CATGAAAATCAATGGAACACCCCACAATCCAGAACAATGAACCTGTATAC
AAATCATTCTTATCTGAACATAAATTTGTCTTAAATCCATTCTGTTGTAA
TAATATATAATAACATTATATAAATATAAAGGAAAAAAtctattttgttt
tcaaatcatCATATATACCATTGCCTTCATTACACAATAACTCTCCATCA
TCTCAACCATTggatttatttttcactttccgCAACCACACTTCAAACCT
GATATCTTGACCTTTAATTCCCTAGACTTAGATTTCTACATGAACATCAA
CTACTCAAGCTCATCCTACCTAATCAGGGATTGGGAGCACAAGGACAACC
AGTATTGAATATATCTCATTCTAAACACATTACTACCTGCCTCTCCACCA
AGTCTTCTGATCTTTCTACTCTCATTCAGCTAATTTCCAAGATTGTAAAC
ACAGGAACACTCACCCCCTTACCACAACATTATCTTATCTTCTCTCTCTT
TTGTCCACAGCCAACATGCAGAGAATCAAAAAAACCAAATCCGTGGATAC
AAAACCCCTACCCTCCACGACCTGTTTCCAACATCGAAACATTGGAAATT
GAAGAAAAGTCATACACGAATTCACGCAGGATTACAACAATCAACTCGTC
CACAATTTATCAAACTATACCAACTGTCCCCACAAGAAACCAGTTTCCTA
TCAAAAGGCCTCAATTACCCAACATGCCATCGTTTAAACGCCAATCCAAC
CCCAATGAAGTCATCCAATCCCTCAAGAAAAGAATCAACACTACTCTCCA
TTTTAACCCACCTAACCACAACAACATCAATCCTGCCCAACGACAAAATC
AAGAACAACCACAAAATCAAGatcaagaaaataatcaaacacGCACCAAA
CAACTACCCTCAAAAGGCCCCAGCAACTGGATACCCCCACCATCTGATTA
CCCTATCATCAACCAATTCTTCGACGAACTTCAAAACATACAATTTCTTC
CTTTCGGTGATGGCCAAACGCAAAACGACAACCTCCACTTTTTAATTCCT
TTTCGTCGACTAAAGAACAACCATGCATGACATCATTATAAAGAAAGCTG
ATAAAGGAGGGGGCATCGTAATTCTTAACAGACAAGATTACATTAACAAG
ATCCTAAACGAACACCTCGACGACGATAACACCTACAGCATAATTCACTT
TAAC Coding sequence (CDS) from alignment at sc0000203:329246..332649 >TCONS_00015093 ID=TCONS_00015093|Name=TCONS_00015093|organism=Clytia hemisphaerica|type=CDS|length=357bp|location=Sequence derived from alignment at sc0000203:329246..332649 (Clytia hemisphaerica)
ATGCCATCGTTTAAACGCCAATCCAACCCCAATGAAGTCATCCAATCCCT
CAAGAAAAGAATCAACACTACTCTCCATTTTAACCCACCTAACCACAACA
ACATCAATCCTGCCCAACGACAAAATCAAGAACAACCACAAAATCAAGat
caagaaaataatcaaacacGCACCAAACAACTACCCTCAAAAGGCCCCAG
CAACTGGATACCCCCACCATCTGATTACCCTATCATCAACCAATTCTTCG
ACGAACTTCAAAACATACAATTTCTTCCTTTCGGTGATGGCCAAACGCAA
AACGACAACCTCCACTTTTTAATTCCTTTTCGTCGACTAAAGAACAACCA
TGCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015093-exon-sc0000203-1491911889:329246..332649 | TCONS_00015093-exon-sc0000203-1491911889:329246..332649 | Clytia hemisphaerica | exon |
| TCONS_00015093-exon-sc0000203-1510915933:329246..332649 | TCONS_00015093-exon-sc0000203-1510915933:329246..332649 | Clytia hemisphaerica | exon |
| TCONS_00015093-exon-sc0000203-1575043694:329246..332649 | TCONS_00015093-exon-sc0000203-1575043694:329246..332649 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000203 | supercontig | sc0000203:329246..332649 . |
Blast
The following BLAST results are available for this feature:
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