TCONS_00015510 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015510
Unique NameTCONS_00015510
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3127

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015510 ID=TCONS_00015510|Name=TCONS_00015510|organism=Clytia hemisphaerica|type=transcript|length=3127bp
CCATagcaaatgatttaaaaaacatttttgttggaaattgaGCAAAATAC
AAGAAATCACAACCACACACGTGGCAATGAGCTCAGACATTCTTCGACAC
GTGACCAAAGATGGTAGCAGTGGATTCAAAGTAGAAAAAGACCGATATCA
TTTGTATGTAGCTCATGGATGTCCATTTGCTCACAGAACCATCATTGGGC
GTAAAATAAAAGGGCTTGAAAATATCATAACAATGGATTACATCGACAGT
TTAAGGGAGGATGCTGGGAAGAGTTTCAACTTTTCACCGGAACACCCGGA
TACTATCAACGGAAAAGAGTACTTATCGGAAGTGTACTTGTTATCACATC
CTGATTACACCGGTCGATGCACTGTTCCGGTGCTATTTGATAAGCAAACC
AAGAAGATAGTGTCGAATAGTTCAGCAGAAATTTTGAAGATGTTGAACAG
TgaatttgaagagttgtcaacGACGGATGTTGATCTGTATCCTGAGGAAT
TGAAGAAGGAAATTGATGATTTGAACGAATGGATCACACCAGGGATCGCT
GGAGCAGTGTATCGTGTTGGTTTTGCGCAACTAGCTCACAATCAAGAact
ctatgataaagaagttgAAGCGTTATTCCACAACCTTGACAAGGTTGATG
AACTATTGGAGACCAAACGATATTTAACTGGTCCACAATTAACTGATGCT
GACATTCGACTCATCGTTGTCCTGTTACGTTTTGATTCTGTTTATTATTC
GCTTTTCAAGtgttgCAAACGCACTTTGGTCTCGTACAAGAACTTATGGC
CCTACCTTCGAGATGTTTATCAGACTTTTGGTTTAGCCTCAATCAACAAC
ATggctgaaataaagaaaatgtatTTCAGATCGCCAAAATTTGCTTCGTT
TGATGGAGTTGTTCCTGTGGGTCCAGAGCTTGACTTCAATGAGCCACACG
GAAGAGAAGGAAAGTAAAGATTGCTTTTTGAGTGGTATGAAATTGTATAA
ATTagaatttagttttcatttacatattttattaaattgtATGGCATCAT
TGCTTTATTTTTCTGCACATAAATGCACTTGCACATTTGAAACTTCGTCA
TTGAAAATTTAATCGTAATGAAACAACATTACTACTTGGTCAATTTCCAC
ATTTTTATCACAAATTATGTATTTTATGCAGGCTCTGCTTGCAAATCTAA
TTAAAGGTACGACACTGCGTTATGATTTATATCATCTCCGACGGAGATCA
TTTAGTATCTTTCTACTGTATCGTTTGACAGAAAAAAACGCTTCCCCGGA
GAGTTGTTAAGGGATCCACGTGAGTTGATCATGTGGTTTTAGCCCTCTAA
AAGGAAATTTGATAACATTATATAAATGAGAGCTCTTAACATTGTTGCAT
GAACGGGCAGATGCAAAAATATCAATCATTATAAAATCAATACGACTCCC
TTATTTCGAATTCATAAGTGGAAAATCTAGACAAGAAGAAAGAGGCCATC
ATCATGGAGTTCTTGTCGAAAGTTGTTCTATTATGTGCTGTAACGACCGT
GTTTTCCGGTGATGGATTGTTTTCACCGTGTAGCTCAACAGCACCTACCA
AGAGTCTTTTTGAATACAAGAGCACTTTATTGAACGGAGAAGAGAAAGAT
TTTAATGATTATGCAGgTCACGTGACAATTGCTGCCAACTTGGCATCTTT
CTGAGGGTTAACCAACATGACCTATCATTACTTAAATGCACTCCAAGAGA
AGTATGGTGGAAATAGCCAATGTTCTCTTAAAGTACTTGGCTTCCCTTGT
GGCCAGTTTTACAACCAAGAACCAGGATCAAATGCAGAGATTCCCAACCT
TTTGCGTTATGTTCGCCCTGGTAATGGCTTCATTCCAAATTTTAACATGT
TTAACAAAATTGAGGTGAACGGAGCTAAAGAAGACCCTATCTTTACCATG
TTAAAGgGTCAATGTCCACGTCCGAACAACGTGATTGCTGATTTTCTAAT
GGCTGTTTCATGGCGACCCATACGCACGTATGATATCCACTGGAATTTCG
AGAAGTTCTTGGTTGATCATAAGGGACAGCCTTTGTATCGTTACGCTGAA
CCTAATACAACTTATGTAACCATTGAAAAACATATAGAAGCAGCAATTCA
AGAATGCCAATCTGAATCGAATGCGGACTATTATGTCAATAAGGTTCAAA
ATCTATGGAAATAGGTACATACttagaccattgagtttcaggcccgaagg
gctagaagcgaaattttaacccttctcaggcaagagaaattgaagccact
tatttcccatctaaaacGCGCagagaacgcgccgtaatcatgccgacgga
ttgtatctagtggttcctttgttttggaggactacattttttgaaatcta
gcgatatattttagtttcaatccggtgtttgtgtaaaaactacgcacGGA
cgtcctggatgggaaataagtggtttcatttcccatacaggagtttcgcc
tctagcccgtCGGGCTTGAAATTCAATGACTTAGACTTGTGCTACGCCCT
GGCGCCCACGGGTGATTTCTGCTTTTTGAAGAACTCTTTAATTCACATTC
CAAACATGAAttaataaatgattttttaattaacagagaatttcgaaatt
tttattgGGAGAGTATAAAGTAAGCCTACTGTTTccaatttgtttttcaa
ataagaAAACTTTCTGTATTTTGATTAAAACTTTAAAAGGAGACGTAACA
GTCAAAATATTCGAACGTATTTAACAGACATgataaacttttattttaaa
agagaaaatattacattctattatatttcaaatttttgatattattttct
ttgaaactaTTTTTCGCATGATGATAGGAAATCCAATTACAATTTTTTGT
AGCATTTCTTCTATCGGATATAGTTGTACCTTTTTATGctgattttttta
tctttgaaaattttgtatttgtgcatttttacagaattttttACTGAAAA
GAATTGGTATATTTTGAGTACGATTTGGAAAAGACAAGAATTATGAATTT
GAAggatttgtctttttttactcGTGTAGGGGAGCAAAATGACTTCCCAA
ACTGAAATGACAAGTAATATATAAAAT
Run BLAST on NCBI

transcript from alignment at sc0000212:208037..218456+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015510 ID=TCONS_00015510|Name=TCONS_00015510|organism=Clytia hemisphaerica|type=transcript|length=10420bp|location=Sequence derived from alignment at sc0000212:208037..218456+ (Clytia hemisphaerica)
CCATagcaaatgatttaaaaaacatttttgttggaaattgaGCAAAATAC
AAGAAATCACAACCACACACGTGGCAATGAGCTCAGACATTCTTCGACAC
GTGACCAAAGATGGTAGCAGTGGATTCAAAGTAGAAAAAGACCGATATCA
TTTGTATGTAGCTCATGGATGTCCATTTGCTCACAGGTTCGTGCGGAGAA
GTAaagtaaaaaagatgtcacggaaccccaggattggccccctactatta
gTAACCTACTTGTACCGTCGCTAATATAATTCAATAAGATAAGATTTGGG
GTGATTAAGTTTCACTGTGCTAAGTATTGGTTTAAGATATCAGTGTTTTT
AGATTACATAAGCCTAAAAGGTTGGATCTTTGTAGAGCAGATATATGGGA
GCAGAAACTGATAACTTTTTATGACTCtgtaaatttaaaatgaaagataa
aGTTTCCGTTTTTCTGGACTagcttggattttttttcatttttgttcttC
TTATCATTTAGAACCATCATTGGGCGTAAAATAAAAGGGCTTGAAAATAT
CATAACAATGGATTACATCGACAGTTTAAGGGAGGATGCTGGGAAGAGTT
TCAACTTTTCACCGGAACACCCGGATACTATCAACGGAAAAGAGTACTTA
TCGGAAGTGTACTTGTTATCACATCCTGATTACACCGGTCGATGCACTGT
TCCGGTGCTATTTGATAAGCAAACCAAGAAGATAGTGTCGAATAGTTCAG
CAGAAATTTTGAAGATGTTGAACAGTgaatttgaagagttgtcaacGACG
GATGTTGATCTGTATCCTGAGGAATTGAAGAAGGAAATTGATGATTTGAA
CGAATGGATCACACCGTAAGATAATTCTATTCTCCCAGAAACCTCTGCTT
AAAAATATCGATTGAGTAATCCTAAAATCATTTTACTAAGTAGATTTTTT
AGTTAAGAAATGCTGGACTCACTCAAAACTTAGTTTAACGATTTTTATGA
TCTACACACAAATCTACTTTATTCAATTTTAATGGTTTAATGAAAagcag
ggctcgaaataacggtcggacatcggacattgtccgacccaaatggcttc
atgtccgacccaaaaatcataattttcaagcaaaagcaaccctgatcgga
cattttgtccgacccacttgaaatcgttatttcgagccttggAAAAGGGA
ATCgatcagcaaaaaaattttaaatggaCTTTGTTTTCGATGCCGATTCG
CTTGTCTTAAAAAATATTCCGAGGATGTATACAGTATAATTAAATGATAT
TAGCTTCACTTTCACCTAGAGGGATCGCTGGAGCAGTGTATCGTGTTGGT
TTTGCGCAACTAGCTCACAATCAAGAactctatgataaagaagttgAAGC
GTTATTCCACAACCTTGACAAGGTAACTGGCTCATTCGAACACGAAAATG
AAAGCAAATACGGATGCAACCGGGCTCTATTGTATCATTTTTGATTGCTA
TTGATTTTACGCTATTGTTTTATTACTTCAACCAAAAACAGCGCTCTTAA
GctcaaaacttcaaaaagcgGACCGCCGAGGGCAAATCCTGTAACGAAGG
GTCAGTAGCAGACGACTACTTAATGACTACTTCTCGGAGATTAGCCTATT
TCAATGGATTCATGTTTTAATTATATGATATTTTTCTACGTCATTCCAGT
AATCAACTTTTGTGTTTGAGCACCCGTTTAAATTGAGAAAAGCAAAAAAC
AATGCGAAAGAATTCTTGAATTCCCAAGTCAATTGAATGATGACagaaaa
gcaattttttcaaagtttttctttccaTCGGGAAATCTGCacaacacccc
ccccccttgaatCGAATAGGAAATAACATATATAGCAGATGCACggatcc
tatgaaataggctaatatTCCTTTTTTATACCTGACTTCCAAAGCATTAA
TGACGCAACCAACTTTAATCTGACTAAACCAGTGAAGATATGCACCCCGT
ACTtaatatttttaccatttttcccTTTCTTTGTATTACAACAGGTTGAT
GAACTATTGGAGACCAAACGATATTTAACTGGTCCACAATTAACTGATGC
TGACATTCGACTCATCGTTGTCCTGTTACGTTTTGATTCTGTTTATTATT
CGCTTTTCAAGGTATGTTTGCTTGAATTTGAATGTGGTTGCTTTCCAGAA
TCTGCTAAGAGTCCGGAGTCATGCTAAGTTTTCCTCGAAAGGGGAACCCG
GATAAAATCGGTACTAGATATGTGCAAGCGGTACCTTTTTTGTCTCGAAA
ATTTCTTGAAGAGTTACAAATTCCGAACCATTCTCTGAAAGGGTCTCAAA
GTCGAAAGGAAATTTGGGGAAAAACTTCTATAAGGATAGTTTCGTATAAA
TATCCCGTTTTTCTTGCTTTCTTctatcttcatcaaaattaacaAAGAAA
GTTCTAATAAGGGTCCCTAAAAATCCCTCCATCTGTACGGGCCAATTTCG
ATTTTGGGCTCTGACCTACCCGTCACCCgtatatttttcgtgtttttttt
ttcagtgttgCAAACGCACTTTGGTCTCGTACAAGAACTTATGGCCCTAC
CTTCGAGATGTTTATCAGACTTTTGGTTTAGCCTCAATCAACAACATggc
tgaaataaagaaaatgtatTTCAGATCGCCAAAATTTGCTTCGGTAAGAA
ACACGAAAAGAGGAAttgtaaacattgaaaaaaaacttttcgaaagCGCA
TTCGGCAATATGCAATATATCCACTTTTTTTCCTCAATCGAATGCGAGGA
AGACAGATGCGGTATCCCACTTCCACGCGATGTCTTTTATAGACCAATGA
AATCGctagaatcttactgatgcTGGATAATACATTATACCTTCGCTAAG
ACATGTCGATTTAGAGTACACTAGGCTGGAGATATTTTCCTTTACCGTTT
TGAAATATATAAACTTTTGTCATCATCTTTCAGTTTGATGGAGTTGTTCC
TGTGGGTCCAGAGCTTGACTTCAATGAGCCACACGGAAGAGAAGGAAAGT
AAAGATTGCTTTTTGAGTGGTATGAAATTGTATAAATTagaatttagttt
tcatttacatattttattaaattgtATGGCATCATTGCTTTATTTTTCTG
CACATAAATGCACTTGCACATTTGAAACTTCGTCATTGAAAATTTAATCG
TAATGAAACAACATTACTACTTGGTCAATTTCCACATTTTTATCACAAAT
TATGTATTTTATGCAGGCTCTGCTTGCAAATCTAATTAAAGGTACGACAC
TGCGTTATGATTTATATCATCTCCGACGGAGATCATTTAGTATCTTTCTA
CTGTATCGTTTGACAGAAAAAAACGCTTCCCCGGAGAGTTGTTAAGGGAT
CCACGTGAGTTGATCATGTGGTTTTAGCCCTCTAAAAGGAAATTTGATAA
CATTATATAAATGAGAGCTCTTAACATTGTTGCATGAACGGGCAGATGCA
AAAATATCAATCATTATAAAATCAATACGACTCCCTTATTTCGAATTCAT
AAGTGGAAAATCTAGACAAGAAGAAAGAGGCCATCATCATGGAGTTCTTG
TCGAAAGTTGTTCTATTATGTGCTGTAACGACCGTGTTTTCCGGTGATGG
ATTGTTTTCACCGTGTAGCTCAACAGCACCTACCAAGAGTCTTTTTGAAT
ACAAGAGCACTTTATTGAACGGAGAAGAGAAAGATTTTAATGATTATGCA
GGTaggattttcaatatttttgtgttGAACTATCATCTGACGTCTTGtat
ccatttttattttttcctgttTTCGCACACCTTGTGAAACGGCATTTCGT
CCGATCTCAAGATCTAAACTTCTGACTAtttgaatttcaagaaaaaaaga
attctaCTGAATTGCTGTACCTGTGAAACAGAGGGAACAGCTTTCCAACG
CTGTCATGGTTCATACCTAAAACTTGCTCACTCAATCATAAGTTGATGAC
TCTGGAATCAAAAGGCTTAActgttgttctttttttaggTCACGTGACAA
TTGCTGCCAACTTGGCATCTTTCTGAGGGTTAACCAACATGACCTATCAT
TACTTAAATGCACTCCAAGAGAAGTATGGTGGAAATAGCCAATGTTCTCT
TAAAGTACTTGGCTTCCCTTGTGGCCAGGTAAACGTTTTCCCTTGTATTa
caaattatgattttcattttggatTCAACGACATTGTAAATCTTCAGGTC
TAGCAAGCATGTAATTTTGTCGGGGGAAGCTTAATTCTAGAATTCGTCAG
AGATGGGGTTTTATACTCTGATAATTGGTCATtcgaagtaataaaaatga
cgcgttctttagaaaaagtaacaaaattgcttggttaacgaccaaccaaa
tcaaataagagcttgtaaaaactccatcttgtCCTGAATTCAGGTTGCAT
TGACGGTAGCACTTgaaatttcttctcgcaaaaACAACATTATTCCAAAG
GATCCTTTTCACTATCTAAAGAAAgtgagaaaaatacaaaaacgatGACA
TCAATTCAACCATTTTTGACGACCATATTCTACAGACATAAATGGAATAA
ACACTTTCACATAGCCGACCATGCATTTCCTCAATGCAAAGTGCTCGGCC
CTgctgttttttcttttgacagGTTTAAAGTTTTAATCGTTAATTAACCA
TTGTTTTGTGATCTTTTTGTTACTTTAGTTTTACAACCAAGAACCAGGAT
CAAATGCAGAGATTCCCAACCTTTTGCGTTATGTTCGCCCTGGTAATGGC
TTCATTCCAAATTTTAACATGTTTAACAAAATTGAGGTGAACGGAGCTAA
AGAAGACCCTATCTTTACCATGTTAAAGGTAATGTTTTATATGTTGTTGA
AGTGCTCTCGGCAAAAACCGATTCAATAAAGAAAATTGGTGTGAAATTCG
GGTCGGTTCGGGCCGTTTTGAAATTTGAGGTCGAAATTCTTTTCGCTCAT
GTGTTCTGATCACATGATTAGAAAATGATCGATGGAGAGTTGTCGATAGT
TTGGGGAGGTCAAACATTTTcctaaaactttaaaaataacaCAAACAAAA
CCAGCtagcaaaaagttttaaaatcgcGTAAAATTGTGCTATCATTCCTG
ATGTAGAATCTTCCAACTGACTCGTTTTGGAGTTTTTTTCAATGACCTAA
ATAAAAATCTGTCCTGTATAACAGGGTCACGTGTATAACTGCCAACTACA
CTTAATTTCATTCAAATGTCAATTTCGAACGTCTGTAATAAGATACATAC
ACGTCTTATCGAGCATGTTGTTTATTTTGTGTCAAACTGTTTATTTGTAC
TAGATGGCATTAAGCAATATTTGGATAAGTTCTCAAGGTTTTATGTTACG
TAAATCAAAACTCTGGCCATCAATTATTATGGTACCAATAAATTTATTAT
GCAACAACTTAAATCTAAACAGAGGACTAGAGCGAGATTTTATATTTTGT
CTTTAAAATAGCGAGATTCGAATTCATCTTTGTGTTGCTATCAATTAATC
TACCAACTCAACCATAAAGGTGACTTTTTAGGGGACAGTGTCGAGTTTGT
GACACAACAATTCTAGAAACCACAAGTGTggtagtctggagatccatact
ctctaacCAAGACAAACACCACCCAAACAGATATCCCATCAGAAGCTGCT
CATTGATAGTATAATATTTtatgacccagtttgaatttgttaaaGGGata
taacagtacttgcgaaattagtaaacaaactgtatgcagcggatacaaaa
tcaaaacaaatgtcacatgtcaaaataaaaaatcaaaccaaatatagCTA
ATAttaattgttcaattgttttacaagtttgttttggacacgttatttaa
attgttctctttaatgacacttggttcgcgcaatgtttacattttactac
tttaatgtccctttaaatttCCGTCGATAGGTAGTCAATCAGATTCGCAC
ATTTAAACCAAAAATTAGTATCACGTGATATCAGTCAACAGTCAACAGTC
AACAGTCAATAAAATTCTGCGCCAGGATCCTGTagtattttcaaagacat
tccCAGGCTTGAAATACCTTGGCTGTTTCCTAAATTCTAAAAAGCTTTTC
TCCTGGAAATTATGAGCAGgtcaaaaacataccgacgtcagcacgatcaa
gacaagatttgacgtcaaaatcacATTAGAGCTGACAAAATTAGTTGATC
TTAAAGcagctgtatttctttgtgtgttttagtcagagagttgttgtaat
acaattctttgctcagaatttcatgctctatcagatggtaccaatcattt
tagtttattttgacttttgaaaataaactatttctctaccccttattttc
tcttgcagttttgcctatggcattactattttggtcacaaaaaaattttc
cggacCTTATAAATTTGACTCttctcaaaaaattataattatataGAACT
ATAATAAACTTTGAAATGGAACAGGTTTCGTTTAGTCCTATAAAAATTGC
CACGGGACCGGAGACTTGGCCCCTTACTATTAGTTAGATTTTACAATTCT
ATTTTCTATTACACAATCAGCTGGAAATGATAATATTTTGTAAGCTCTCC
TGACTGACCAAAcagaataaaaaaagattttctcaaaatttatgctAAAG
TGGTGcgggaaatgaaaaaaaaattctaccttTTGTTTACGAATACTGTG
Ttagcaaatggtaggagatcactgacctttatataccctggaccaatcct
agcccggggtccacttaaagctttttttatagactggatggcgcgattaa
gtggcccggtagtatatggtattATGCTTTTGCtaaggcggactgtaaaa
cagtccgccagatttttgttgtttttggaaggtaaaaacagtatgaagca
atgtttttatttgagaataagggattgcgaATCTGTTATTGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNactgatttttgcgacc
agaactttctattaatttttccctacaacccttccctctccccccatcaa
caatcaatgatgaatttattgcgttgtgTATTTTtgctaaatgctatatt
ttctgaccgatttttttcatttttcttttcgcattgctaactaactttca
tcatcaggtaggtccattcagcatgttgcttgttgattatatctttcaac
tccaagtagttttattgttatttggatttttaacatttttttcaaaatgg
cgacctcgccaagcgctcctagtctacttcactggactcagcgtcataaa
aaattatcaaaaagcaaagttcagccaaaagtagactctagtctagacCA
ATCCGGGCCAattaaaaagagttttttgaaaagtaccctaatggcggcac
tactcaatagcggtgtaaatgcatcgagagcgctagatctactttccctc
ggaaacttttgatgatgtagcgccgctagacgttaatttttaacactgca
atggcttctttacgggtgcCAATAGCCATAGCTTGGTCTTGGTCATAGCT
TGGTctagggatatataaaggtcagtgtagGAGATACGTTAAATTATTCT
TGTAATGAATATGAATATGATTGAGATGTATTTCCATACCAACACAAATA
AGTTTAGAGCATTGAAGGAATACAAATTTAGTGATACCTTGTCTCATTGG
AGCCTCACATTTACAATGAAGTAAAGTAGactgtttttcactttttcagg
GTCAATGTCCACGTCCGAACAACGTGATTGCTGATTTTCTAATGGCTGTT
TCATGGCGACCCATACGCACGTATGATATCCACTGGAATTTCGAGAAGTT
CTTGGTTGATCATAAGGGACAGCCTTTGTATCGTTACGCTGAACCTAATA
CAACTTATGTAACCATTGAAAAACATATAGAAGCAGCAATTCAAGAATGC
CAATCTGAATCGAATGCGGACTATTATGTCAATAAGGTTCAAAATCTATG
GAAATAGGTACATACttagaccattgagtttcaggcccgaagggctagaa
gcgaaattttaacccttctcaggcaagagaaattgaagccacttatttcc
catctaaaacGCGCagagaacgcgccgtaatcatgccgacggattgtatc
tagtggttcctttgttttggaggactacattttttgaaatctagcgatat
attttagtttcaatccggtgtttgtgtaaaaactacgcacGGAcgtcctg
gatgggaaataagtggtttcatttcccatacaggagtttcgcctctagcc
cgtCGGGCTTGAAATTCAATGACTTAGACTTGTGCTACGCCCTGGCGCCC
ACGGGTGATTTCTGCTTTTTGAAGAACTCTTTAATTCACATTCCAAACAT
GAAttaataaatgattttttaattaacagagaatttcgaaatttttattg
GGAGAGTATAAAGTAAGCCTACTGTTTccaatttgtttttcaaataagaA
AACTTTCTGTATTTTGATTAAAACTTTAAAAGGAGACGTAACAGTCAAAA
TATTCGAACGTATTTAACAGACATgataaacttttattttaaaagagaaa
atattacattctattatatttcaaatttttgatattattttctttgaaac
taTTTTTCGCATGATGATAGGAAATCCAATTACAATTTTTTGTAGCATTT
CTTCTATCGGATATAGTTGTACCTTTTTATGctgatttttttatctttga
aaattttgtatttgtgcatttttacagaattttttACTGAAAAGAATTGG
TATATTTTGAGTACGATTTGGAAAAGACAAGAATTATGAATTTGAAggat
ttgtctttttttactcGTGTAGGGGAGCAAAATGACTTCCCAAACTGAAA
TGACAAGTAATATATAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008656XLOC_008656Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015510-exon-sc0000212-1491911889:208037..208222TCONS_00015510-exon-sc0000212-1491911889:208037..208222Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:208037..208222TCONS_00015510-exon-sc0000212-1510915933:208037..208222Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:208037..208222TCONS_00015510-exon-sc0000212-1575043694:208037..208222Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:208548..208901TCONS_00015510-exon-sc0000212-1491911889:208548..208901Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:208548..208901TCONS_00015510-exon-sc0000212-1510915933:208548..208901Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:208548..208901TCONS_00015510-exon-sc0000212-1575043694:208548..208901Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:209356..209458TCONS_00015510-exon-sc0000212-1491911889:209356..209458Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:209356..209458TCONS_00015510-exon-sc0000212-1510915933:209356..209458Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:209356..209458TCONS_00015510-exon-sc0000212-1575043694:209356..209458Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:210081..210197TCONS_00015510-exon-sc0000212-1491911889:210081..210197Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:210081..210197TCONS_00015510-exon-sc0000212-1510915933:210081..210197Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:210081..210197TCONS_00015510-exon-sc0000212-1575043694:210081..210197Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:210592..210729TCONS_00015510-exon-sc0000212-1491911889:210592..210729Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:210592..210729TCONS_00015510-exon-sc0000212-1510915933:210592..210729Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:210592..210729TCONS_00015510-exon-sc0000212-1575043694:210592..210729Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:211020..211787TCONS_00015510-exon-sc0000212-1491911889:211020..211787Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:211020..211787TCONS_00015510-exon-sc0000212-1510915933:211020..211787Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:211020..211787TCONS_00015510-exon-sc0000212-1575043694:211020..211787Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:212075..212214TCONS_00015510-exon-sc0000212-1491911889:212075..212214Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:212075..212214TCONS_00015510-exon-sc0000212-1510915933:212075..212214Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:212075..212214TCONS_00015510-exon-sc0000212-1575043694:212075..212214Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:212765..212914TCONS_00015510-exon-sc0000212-1491911889:212765..212914Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:212765..212914TCONS_00015510-exon-sc0000212-1510915933:212765..212914Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:212765..212914TCONS_00015510-exon-sc0000212-1575043694:212765..212914Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1491911889:217286..218456TCONS_00015510-exon-sc0000212-1491911889:217286..218456Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1510915933:217286..218456TCONS_00015510-exon-sc0000212-1510915933:217286..218456Clytia hemisphaericaexon
TCONS_00015510-exon-sc0000212-1575043694:217286..218456TCONS_00015510-exon-sc0000212-1575043694:217286..218456Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:208037..218456 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.31678	1.7297	2.34715	2.03388	0.395403	0.781131	1.13088	1.76453	1.72954	0.994649	2.89629	4.10072	3.80252	2.98703	6.28504	5.25602	5.06247	4.73766	1.8701	1.46769	4.03969	4.25195	3.52386	2.59793	1.3379	1.61547	2.9148	3.75436	3.09162	3.31566
Blast
[Close]
BLAST of TCONS_00015510 vs. Swiss-Prot (Human)
Match: GPX5 (Epididymal secretory glutathione peroxidase OS=Homo sapiens GN=GPX5 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.103e-39
Identity = 86/222 (38.74%), Postives = 128/222 (57.66%), Query Frame = 1 
Query: 1513 LSKVVLLCAVTTVFSGDGLFSPCSSTAPTKSLFEYKSTLLNGEE-KDFNDYAGHVTIAANLASF*GLTNMTYHYLNALQEK---YGGNSQCSLKVLGFPCGQFYNQEPGSNAEIPNLLRYVRPGNGFIPNFNMFNKIEVNGAKEDPIFTMLKGQCPRPNNVIADFLMAVSWRPIRTYDIHWNFEKFLVDHKGQPLYRYAEPNTTYVTIEKHIEAAIQECQSE 2166
            L  ++L C V T    + +   C       ++++Y++  LN  E   F  Y G   +  N+A++ GLT   Y  LNALQE+   YG      L VLGFPC QF  QEPG N EI   L+YVRPG GF+P+F +F K +VNG KE  +F+ LK  CP P+ ++  F  ++SW P++ +DI WNFEKFLV   G P+ R++    T  +++  I A +++ +++
Sbjct:   10 LLPLLLACFVQTSPKQEKMKMDCHKDE-KGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYG------LVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTF-KSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSH-RATVSSVKTDILAYLKQFKTK 221
The following BLAST results are available for this feature:
BLAST of TCONS_00015510 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPX51.103e-3938.74Epididymal secretory glutathione peroxidase OS=Hom... [more]
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