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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015887 ID=TCONS_00015887|Name=TCONS_00015887|organism=Clytia hemisphaerica|type=transcript|length=915bp
TTTTAGCTATACCTCGACACAATTTTTCAGaagatcaaaaataaaaaatg
ttgaagAATCATCCTGATCCAAAAACAGCAGAAtctatttttgatttcca
agtTTTGGACATTGACGGTCAAGTTGTGGAACTATCAAAATACAAAGGAT
GTGTCACTTATATTGTCAATGTGGCGAGTGAATGAGGTCTAACAAAGACC
AACTACACTCAGCTGGCTGAACTGTATTCAAAATATGCTGAGCAAGGTCT
TCGAATTTTAGCATTCCCGTGCAACCAATTTGAGGATGAAGAACCTGGCT
CAGATCAGGAAATACAAGAATTTGCCAGAGCTAATGGTGCTCAATATGAC
TTATTTTCAAAGATTGAAGTCAATGGAGATATGGCACATCCACTGTTCAA
GTATTTGAGGACAAAAACAAAATCTGTGATCGTTGATACAACCAATTCTT
TATACAATTATCTAAGAGATAATCGACAAGATTTACTCGAAGGAGATAAT
ATTAGATGGAACTTTTCGAAGTTTTTGTGTGACAAACAAGGCCAGCCTGT
TGCCAGATACTCGCCCTCGGTTGAACCGAATGGCTGTGTCAATGATATTG
AGAAATACTTAAAGTTGGAATAACTTCAAGACCCTTTGATTTTGTAGTGA
ACGTCAGTCTAAAGAAAGCAAATTAAATTAAGTTATGTTTCTTTTAGAGC
TTATTTCTTCTAAGACATTATCTTACAGAGAATATCTGAtgcagaaatat
tttcaaaactcgATTAAAATTATGCAGCAAAATTTACTTGTCATCCAAAA
CTCTAATAACTGGAAAGGCAGAGGTTTTTATGAAGGAACAATTGTAATCT
TAGTATATAACTTAAGCTGATTGCTCTTGATGTATATTTCTTTGTAAAAG
TAACATTTATGCCAT Run BLAST on NCBI transcript from alignment at sc0000222:9587..20728+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015887 ID=TCONS_00015887|Name=TCONS_00015887|organism=Clytia hemisphaerica|type=transcript|length=11142bp|location=Sequence derived from alignment at sc0000222:9587..20728+ (Clytia hemisphaerica)
TTTTAGCTATACCTCGACACAATTTTTCAGGTATGTATTATTTCCACTTA
TTTAGAGCATTACAATCAAAGTAGAGTATGAATTACGGCAGAAATTTAAA
GATGTCCAAagagatttaaaatttttgtttacccCTGTCAGACAACGTAT
ACCGTCGTGAGCGTGGTGGTGAGATCGGTAACTTGCACCATCATCAGTAA
CAGTAGtgtcagtggaggctaacatgcatagccctcaaatgactgaccaa
tcaaaggagcaaaatttcaaaacaaatgaactactaCGCAGCTCCggtcg
cagctctactctaccatttttgttttgataagtttgtattttaatgacca
caTAGTCTACAGACTAGACAGGACAGGcacagacaggtcattcatttaaa
GGCTATGCATGTGTTTGCTTCCATTGATGCAcgagttacccaacttcacg
gtacATTTTTTCCAGTCTTTTTCCAGTGTGTGGTGGTGGTCGAaaattcc
aatgaaaatccatttAGACTAGAGTCAAGTCACCAGTGCACAAATggccc
cagtgcacgaacggcccCAGTGCACAAACGAACATCtctgaacttgaaaa
aaacaaccaaaaaaaacaaacttctatagaatttcctttgtgcagcagaa
tcctcaaactatcCCTTGTAATctgtcaaaaaattaaaataaatgtCGAG
CAACACCAAACCGATTTGAAAgaggccaagtaaaaaaatcacgaaattca
ggatttttgtaaacaaacatgGCTGATCGCAAgaggaaatgattttttat
aagaagatttgctcaagaagagttctgaaaataactttcctcttttaaac
tcttttaaaaACTTGTTATCAAttccatcacacaaaatttcattgaatca
tGTTATTCCAATCATGTTATTGTTCATTAATTAAAATCAATAGatagaaa
catatcaccagTAGTTCATATCAAAAAGGGTCCATCCGCGAATGATTCAa
acaccatattcaaaatgaagacattgcaacgtcaaaacattcgaCAGCTG
GCcatctcaattaaaaaagaaggggaaaaagaagacactacattgctgtg
cttttcgatgagcaaaacttgaaatagaaaacaaaaaatggacgacaaga
aaatatttacaaaaataagcCAGGTTAGTAAAACGCTAAAGTTCTTATAT
ATAAGAAAGACGCTTTTCTAGTGAACAAGCCACTTGTTTTTGAAATGTTC
AAatactatataataaaactcGGAGGAGAGTTAAAGTATTACCTGTAAGT
GgagctctaattttttctttaaaaagatcgTTCGCGCACTGGGTCCAAAT
AGCACTCGCTTTAAACGGCTTATATTCtaacaagaaactctcaaataaag
tgaaaagaaactgaaagaaggacttcaagTTTGTCTACGAGACagtcaaa
aaggatttatgttaaaaccaaaagtaagtgagaaaagtgaaaaataagtt
tggcGTTTGTGCACTGGGCACCCCTCTACTTTTTGCAAAATAtgtcggaa
attccactcttttttactgtttttaattcaattgtcTTGGAAGtccatac
attttcttctctcaccttgccttgaaattttgaattttggtgaaaacttt
ttgttttttcggGGGCGCTGTCTGTAAGCCTCCCTCTACCCGAAAAACTG
TAACCTTTTTAGTTTGggggcgacgtccatattcatAGTCGCCACatgta
acgggaaaagaccatTACTTTCAAAACATACCTACCCACCTCCTTAATGG
TCTTCATGATTTGACTAAGATTTAACCAAAGCTTCCTtttagttctagtt
ctagttctattgaattatcacataatacattacatacattttcgtgattt
taatcataaaggataaaataaaataaaaagttaaaaacattagcgCAAGA
TGTTCTAAGACGCTGGTAAATGTGGATTcctgctaaaatcaaaacaaaca
gccCGCTACAAAGGTTGCCATTTTCGGAGGTTTACAACAACAGAATTCCA
TcacaatttgtttttgtttttaaaactccaGAGGCAAGAATGTCATACTC
TGAAACCACCCCTAAATTGCTCAGGGAAAAGATTTTGGATAGCGTGCTAA
AAGAAAAAACGAAGAAGTGAGTGCTACAGTTAAGCagtctttgatttttt
ccttggaaTTTTTAGTGGAATTTCATTTCGGTCATCAATGCCACAGCTAA
CTCTCATCATTCCAATATACCTACCtactaacggtcttttcccgttatgC
GTCACAATTTGAATATGGATGCTGCCccttgagggaagaaaaaaattaga
gtttttgggtttgccaaaaaaacgccttgtcaaaaattttttatcttcgc
aggatccattcccaacctTGAAAGACATCTTTTTGTTGAGggattttttg
gcaaatttcttcaaagaatatccatcactttcgttttctcttgAAGTCTg
cgaaagaaaaatataaggGCTCGCGCTCTTAGGCAGACGGCCTAGACTCG
CtttcgttttgtataattttattatAGCGTATAAGGTAGTGTAATTTATG
CAAAAGTGataataatctttttgtttaaacTTTAGCTGAATCCTCGAATC
CCGGATATTTAAGAAAACTAGctgtattgtataagggttgcaaaGCGATC
CCGACTCCACCTCAGTcaggtcggtagtaaaatctcagacataatgacgt
ttactacagtggtggtgtgacgaaaaattgagaaaaattttttcacttcc
cagggtagttaaatactaaaatgggtggtatctatattttaaatgttgaa
aaaaatttactacgtgggtagttaaaactggtaaaattagcaaattttag
ctttttttgtaattcttttaattttttggatgacttttctgaaaaaatct
gaaattttttataatttgaaaacattttctgttgaaaagttgtttttcaa
tataaaaaagactttaattctaagggcaaaacattaatttttgcactaag
tgaaaaatgtgtctcagaaataatcattttttagctttttttgtaaaatc
agtctgaaaagcaaccaaaaaataggtggtctccatgacaaattgtccca
aaagcttttactaccagggtagtaaaatacctcttccaagagtctgggtg
gtggtatgtagaaattcgtaaaaatccttttactactcatatatgtctga
gattttactaccgaccccccctgcCTCAGTTCGCAaattgctagcaaaat
aagagataCTCTAAAAAATCCCTTTAAAGAGACAGGGTCCTAAgcatatc
tatatattaatagccgtagtctgtatgtctgtttgtttgttttttgtgac
actttcgttttcgcaagcaatatttttttttgttctcgataagtttgttt
tgattgacagattggatagagcctggtttagactttattcagcctttgtt
ttgaaattgaaggcccgtctacatttagtaattttaatttctgcccaaag
gtttttctcttttcttttgtattaaatgttttcaaatgtgatttacgatc
gtatttattaatgacatttgaattcttttcaaaacaaaacaaattccttt
tatagaaaagaacatttcaaatgtaagtaaaccaaaacataaaaataaaa
gagtttGTCAAACAACAACATCATTCAAAGGGCGAGAAAAAGCAAGAGAA
AAAAATAGCCcacctctttcttcatataaaaacattcaagttgttgttac
tgttaaaaagtgtgtacgaCATTTTGCATAtctaaattcgaaaagttaga
TATGACAAGGGTTAAAAAAAAGTAATCTAGTACTgtcttattattatttt
tttaatctgatAAATACATAGAGTTGCgctattctttgtggctttctttc
ccgctttttcctggacggcatatttaagGCGAGTGAAGCGAGACTAAAAT
CTACTTGcagatttcaaaacaaaaaactaagTCATGGGGACAGTACacaa
tccaaatatggttaaaagataagccACCCAGGGGAGTactagagtcaaac
tttgaggATTTTGTATGGAGACtttgagatttctttttttatatttgatc
gtgcttttaagccaccttcaacatccaaagaacttttagtgcgttcagct
acagcttaaccggggtgcgacgccgggtaccagCTAGTATCAATATAATA
TGTTCCGTTTAGGTCACAAAACATCCACAAATCTAGTCAGTTGATAGCAa
atattgtcatttttttaaaatttagtaaATCCCAAAGAAtccagtcaaaa
aaaaagaatcccTTGCCGCCCTGTTTAAATTTGCTAGGATAAATCCAGTG
AAATGCGTCAACCTTAAAACTGAACCCGATTTTTTGCCCTAGCCTAGAGG
GGTACAGTATCGACTTTACCACGTCAGTGAATTTCAACTTGATAACTCAA
TTAggactcaatgtgggtgaagtaaacaaaaacttaaACCGAATAATGGT
AATGTAAGTAAAAAAGGGCTTAGCCATTGAAGTTTTCTGACATTATTGTG
ACTGGGCCGACTCgggatttatgttttgaaggtCAGTCGGCCGGGCAACT
CAAGAGTACATATTCTTGCTTGTCCCCTttatgccccaaacacaccacac
aaACAACAATGGCGCAACACCACCGCCCTAACACCACCGCCCTGCGCAAC
GCTATTTCTTTCCTTCTAGTTCTTCTAAAATAAATGGTGCCTTATAAAGC
AGTGTtgcaaaaacaataaaaactttgaaaaagtagtCCCTTAAAAATCG
TTTgctttactcaaactagtatAAAGCTCAGTTATCATTAACATTGAGCA
ATGTTATTGGCTTTGGCTTACAAAGCATAAATTGATAGTAGAGATTTTGT
ATATACAGATGAAAAAGAGTTGTAAAATATACAAACGGAGTAGGCAGGCC
ATTTTCTAGAAAGACAAGGAAGCATCAGCTTGGaaccaaaaagggcactt
ttttctggtaattttctaacaaaaaggcaatttttgctactaatttcaac
atatttgtaactttttgttgGGGCAGCGTCCAATAATCGGACCATTAAAA
GGCATAAAAAATGGCCTGGTAGGTAGTCAGTAgtaagtattaggtagtaa
gCATAATTAGTAGGCCATCTGTACCTCCCGAATACATAAGATTCTACAAA
GAAACAATTCAAAATCATAGAATAATTTTTGATAACCTAAAAGAAGTTAC
TATAGGAAATGggatatcaaaattttaactttttaagTTAAAGCCAAAGT
GCTTACCTGCATTCTTGAGTGCAGTAACTTAAAAAtgacagattttttaa
attgtttgaaAGCAAAAGCTGctggaaacaaaaaaaaattgagcagGAAA
ACATTTTACCAGCTTATACTAAAACTAAtccatttcaatttcaaagtctA
TTACTCTGTCAATGTCAAAAATTTACCAGCATATTATTGGGTGCACGCCC
TTTTTCCTTTTTacaattgtttttttgaaaaaatcttcctatcaattTTA
GAAATTATTCTGTGTGGCTAAAAACAAAGTGAAAAGTGAAGggcataatt
aatttttaattaattatttttaatattccagtttactttaaaaaaaaatt
ttttctcaatatGTTTGCAGACTAAACTATCTTTTATTAGCATGTTAAAG
TTGAgctctttaaaataaaaaagacaaacaGTATCATGTTGCAGTAGAAA
TATTGTGATTAAGTCGAAATGTGATGTACAACATTTTATTTACTTTAGAT
TAACTAAAATTGTAGTATTTGTCAACAAAAGCTgactatttttttctatt
tttttctcttagTCTAGCTACCTATACAATGAATATAGATTGTATGAGTA
CTGTAGGTTTGAAAACGTTATTTCAGGCTTTATAGAAAGCTTACAAAGAA
CTTTaaccttttttattcaatctagGTTTAAGAATATATAGAAAGACATC
AGACATAATTCATTTAAATtagactttctttttattataacGTTATTCAC
ATTTCTATAAGAGTTTTTGAAGTAAAATGAATCTATTTTGATAAGTTTTA
GCAAGCTTCCTTACACGTTTAGGTGTTACCAGATGCAAAagtgaaatgaa
aatttatcatatcAAATAAAATTCCTGTGGTGTTTAGGAGTTCTTGGgca
aacttttattttcaatcttatGTGTTTACTGttcaatcctttttttaaca
aatgaaatgttttttacAGATATTAAAATTAGTAAGACAATGGCAGAGTT
ACAAAACCCTGATCCAAAAACAGCAGAatctatttttgattttgaacacG
AGATAAAGGTACCGGAGGAGGAGTTGGAGTTTATATAAAATCGAATTTAA
ACTATGACATCAGGAAAGATCTTGAACACTCTGAAATTGAAAGTATTTGT
attgaaatcaaaccaaataaaaGCAGATCTTGGCTTTTCAATACCATTTA
TCGACCCCCGGattcttcaaaatatctgtcaaaaaactttcaacaacttt
tgacaaatatcATCGATTCTATGTACaatgagaaaaaagaaacaattatC
ATGGGAGATATTAACGTCAATTATCTCTCTAAAGATGATCATAAAGTGTT
AAAGGAACTGTTTTTATTAAATGGCTATAATCAATTAATCAAAGAGGCAA
CTAGAATAACTGAAACAACAGCTACTTTGATCGATGTTATTTTAACAACT
AACGCATCAAACATCTCGTGTTCCCAAGTTATTAATTGTAGTATGAGTGA
TCATGATATTGTTGCTTGCTGTCGAAAATTGAACCATTTTAAATATGAAC
CAGAAACTATTAAGTgcagagatttttcaaaatacaatGTTGACACAATC
AATAATGAACTGTTAAATGTTGATTGGAATGTCGTTTACAGCACTACATG
TCCTGTCAATGCACTCACCCACCTTTTATCGATTCTCAAAGAAACACTTA
ACAACCATGCACCTATCATCACTAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNATTTGGTAATGTTTGTGAGCCCtttcaaaaatactttgaaCTGAAG
AAAAAGCAAACTGCTAGAAATTTATCTACAGTGAATGTTCCAAGATTCAA
ATTAGAATCTGCTCGATATTCTTTCTATGTTCAAGGGGCCTTGGCTTTTA
ACAAATTACCAAAGAACTTTCAAATTGAGAAAGACGAATCAAAATTtaga
tcatttttgaaaaaatattaataattttATTGTGCACCTGACACCTACTT
TTAGATTTTTGCTACAAGCATACGTTTTTAGTTTCTAGCTTTACTACTTA
GTCTCTTTCTCTCAGCGTCTTTCCACCTTCTAGTCTCTTGTGGCGTTTTA
GCATTAGATTTTACCACCACTTCTCCGAGTCTTGTATTTTACAAAATGTC
TNTCTGTTCTGTTTTATTATTAACAAAATactgtttttaatatttttaag
aagatcaaaaataaaaaatgttgaagAATCATCCTGATCCAAAAACAGCA
GAAtctatttttgatttccaagtTTTGGACATTGACGGTCAAGTTGTGGA
ACTATCAAAATACAAAGGATGTGTCACTTATATTGTCAATGTGGCGAGTG
AATGAGGTCTAACAAAGACCAACTACACTCAGCTGGCTGAACTGCATTCA
AAATATGCTGAGCAAGGTCTTCGAATTTTGGCTTTCCCATGCAACCAATT
CGGAAAGCAAGAACCAGGATCAGATGAACAGGTCAAGGAATTCGCCAAAG
CCCATGGCGCAGAATATGACTTGTTCtccaaaattgacgtcaatggTGAT
ACAGCACACCCATTAtataaatatttgaaagaaaaacaaaagggACTACT
CGGTAATAAGATTAAATGgaacttttcaaaattcttatGTGACAAGAATG
GCCAACCTAAAGCTAGGTATGCACCAACTACTGGCCCAATGTCATGTACT
AAAGACATCGAAAAACAGTTAGCAAAATAGGATTCATTTTATGTTCACAA
AACATCATTTTAGTTTTTGATTAACTtaagattttaaacttttatacACA
GACGAATTATGCATTCATGTTGATaaattagaatttattttttcatattt
tgggcacattagaataattttaggctcattatattttattatctcATTAT
TTGAAGACTTTTATGAAGGGACAACTATAAACCTTTTGAATAGAAAGGTT
AGTTGTTCCTGATGTAtatatatgttttttatttcaggaaTTTATTGTTA
AATGCAGTTCAGGCAATattttcttgtaaacattcgagTCTGTTGagaaa
ataaagaatattttgGATAAATGATTACAATTATATCATCGATACAACCT
TGCCTGTCAAAAGAAGACACTACTTTAGAAAATGATGATTTGCAAAATAT
CCTTCTAATTTTCAGAGTCTTCTTCTGCCACCTCATTCTCTATAACATTG
TATAATGATTGAATCTCTAGTTTTTTTCACTGCTTATTATCAGCAATATT
CCTTTTCCTCAGATATCAGGCCCTCTAGAAAATGTTTAGTCTCACATATT
CTGTTACACCTCACGTCTGTTCTGTTTTATTATTAACAAAATactgtttt
taatatttttaagaagatcaaaaataaaaaatgttgaagAATCATCCTGA
TCCAGCAGAAtctatttttgatttccaagtTTTGGACATCGATGGTCAAG
TTGTGGAACTATCAAAATACAAAGGATGTGTCACTTATATTGTCAATTCG
GCGAGTGAATGAGGTCTAACAAAGACCAACTACACTCAGCTGGCTGAACT
GTATTCAAAATATGCTGAGCAAGGTCTTCGAATTTTAGCATTCCCGTGCA
ACCAATTTGAGGATGAAGAACCTGGCTCAGATCAGGAAATACAAGAATTT
GCCAGAGCTAATGGTGCTCAATATGACTTATTTTCAAAGATTGAAGTCAA
TGGAGATATGGCACATCCACTGTTCAAGTATTTGAGGACAAAAACAAAAT
CTGTGATCGTTGATACAACCAATTCTTTATACAATTATCTAAGAGATAAT
CGACAAGATTTACTCGAAGGAGATAATATTAGATGGAACTTTTCGAAGTT
TTTGTGTGACAAACAAGGCCAGCCTGTTGCCAGATACTCGCCCTCGGTTG
AACCGAATGGCTGTGTCAATGATATTGAGAAATACTTAAAGTTGGAATAA
CTTCAAGACCCTTTGATTTTGTAGTGAACGTCAGTCTAAAGAAAGCAAAT
TAAATTAAGTTATGTTTCTTTTAGAGCTTATTTCTTCTAAGACATTATCT
TACAGAGAATATCTGAtgcagaaatattttcaaaactcgATTAAAATTAT
GCAGCAAAATTTACTTGTCATCCAAAACTCTAATAACTGGAAAGGCAGAG
GTTTTTATGAAGGAACAATTGTAATCTTAGTATATAACTTAAGCTGATTG
CTCTTGATGTATATTTCTTTGTAAAAGTAACATTTATGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015887-exon-sc0000222-1491911889:9587..9616 | TCONS_00015887-exon-sc0000222-1491911889:9587..9616 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1510915933:9587..9616 | TCONS_00015887-exon-sc0000222-1510915933:9587..9616 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1575043694:9587..9616 | TCONS_00015887-exon-sc0000222-1575043694:9587..9616 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1491911889:18687..18842 | TCONS_00015887-exon-sc0000222-1491911889:18687..18842 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1510915933:18687..18842 | TCONS_00015887-exon-sc0000222-1510915933:18687..18842 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1575043694:18687..18842 | TCONS_00015887-exon-sc0000222-1575043694:18687..18842 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1491911889:20000..20728 | TCONS_00015887-exon-sc0000222-1491911889:20000..20728 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1510915933:20000..20728 | TCONS_00015887-exon-sc0000222-1510915933:20000..20728 | Clytia hemisphaerica | exon |
| TCONS_00015887-exon-sc0000222-1575043694:20000..20728 | TCONS_00015887-exon-sc0000222-1575043694:20000..20728 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000222 | supercontig | sc0000222:9587..20728 + |
Blast
BLAST of TCONS_00015887 vs. Swiss-Prot (Human)
Match: GPX4 (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Homo sapiens GN=GPX4 PE=1 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 9.802e-50 Identity = 86/188 (45.74%), Postives = 117/188 (62.23%), Query Frame = 3
Query: 48 MLKNHPDPKTAESIFDFQVLDIDGQVVELSKYKGCVTYIVNVASE*GLTKTNYTQLAELYSKYAEQGLRILAFPCNQFEDEEPGSDQEIQEFARANGAQYDLFSKIEVNGDMAHPLFKYLRTKTKSVIVDTTNSLYNYLRDNRQDLLEGDNIRWNFSKFLCDKQGQPVARYSPSVEPNGCVNDIEKYL 611
M + D + A S+ +F DIDG +V L KY+G V + NVAS+ G T+ NYTQL +L+++YAE GLRILAFPCNQF +EPGS++EI+EFA ++D+FSKI VNGD AHPL+K+++ + K + +L G+ I+WNF+KFL DK G V RY P EP D+ Y
Sbjct: 28 MCASRDDWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKG-----------------KGIL-GNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 197
The following BLAST results are available for this feature:
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