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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015917 ID=TCONS_00015917|Name=TCONS_00015917|organism=Clytia hemisphaerica|type=transcript|length=1426bp
CTTAAATTACCTTTTACGATCACACTAATAAATCCTTTTGCTATGTACAT
TTTTAAGCGATCGGGTTGCTAAAAAACTTGGCAAAAGATCTAACTGACCT
TACTCAGATCTAAAAAACGAGCCATTTttcatgtatctatttttcttttt
ccagtaaaaaaaaagaaaataattaaagaataaaaagtCAAATGTTATGA
ATATTTACTACATCAAAAAATCGATGGATCTACTACCAATGCTGCCAACG
AATTGAATTCATTTGTGCACAATGTGAAACTGAAAAGAGATAGCTCTACA
TACGCTTATGAACATATGTCACTGCAGACGCCTACATTGAAACCGTCCTT
GATATCACAATTCATATAGGGAAATTTGCAAGACACACATTCCAGTTATC
TCGGATGTTTTCAAAATCAGACTGCATGCTGATCCCCCAATTGTACTTCG
ACTCCGACATCATCGAGACAACGGAtggtaaatttttcaaatgatctAGC
ATGCAGTTCATTCCTTGCCCATATAAGCCCGACGACTTTTGAAAGTTCTC
ACCAAGAATCTACAAAGAATACAACCGAAACATGAAAGTTAATTATTTTG
GTGAATGCGTCTCAAAAAGTATTAATACTTGACTAAAACCTACGACATTC
TTGATCAAGTTTTACCAGTGTTTATTGCCCGGCTAGCTACCAATGAAAAC
TGAAAAGCCCATTTTGGTTGGAGAGAAAAATTCCGGGAAAACCTCTATGG
TTAAAGTCATCACTGCCCTTACCCATCTCAAGTGATTCAACCAAACTTGC
TAAAGTGGACTGATAGATTGGAGCATTTAAAATGCACTAATAGTTTTTGC
TTGTTTACTTACTAAAATTCTACTTGAATTCCAAGCTGCAATCCTATGTT
AGACCACGTGACATCAAGCAACGTACATCTCAAAGAAAACGCAGGTCAAC
TACAACAGTAGAAAAAGACTGGAGAGACGAAGGAAAAGTTACCCCCGTTA
AAGATCAAGGCAGCTGTGGAAGCTGTTGGGCGTTTTCTACGACTGGGACG
ATTGTATCTCATTATGCTATCAAACACGGTCCATTAATTCCATTAAGTGA
ACAGCAACTAGTTGACTGTTCAACAGAAAATAGTGGATGTAATGGCGGTG
TTGTTCAATGGGCATATAATTATGTCAAAGAAAAAACTGATGGACTTGAA
TCGGGACATCAATATCCGTATGAAGCTATTgacaATAATTGCAGATATGA
TCATTCCAAAGCTAAAGTCACAATATCAGGTTATAAAGATATTCCCTTTG
CGGATGAAACGGAACAAGTCGCTGCTTTAAATAACCATGGCCCAATTTCA
GTTTGCATTGATGCCGGTCATCTTTCATTCCAACTTTATTCGAGCGGAGT
TTATTATGAACCGAACTGTAATCCCC Run BLAST on NCBI transcript from alignment at sc0000222:391344..406397+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015917 ID=TCONS_00015917|Name=TCONS_00015917|organism=Clytia hemisphaerica|type=transcript|length=15054bp|location=Sequence derived from alignment at sc0000222:391344..406397+ (Clytia hemisphaerica)
CTTAAATTACCTTTTACGATCACACTAATAAATCCTTTTGCTATGTACAT
TTTTAAGCGATCGGGTTGCTAAAAAACTTGGCAAAAGATCTAACTGACCT
TACTCAGATCTAAAAAACGAGCCATTTttcatgtatctatttttcttttt
ccagtaaaaaaaaagaaaataattaaagaataaaaagtCAAATGTTATGA
ATATTTACTACATCAAAAAATCGATGGATCTACTACCAATGCTGCCAACG
AATTGAATTCATTTGTGCACAATGTGAAACTGAAAAGAGATAGCTGTAAG
TTTGAAAAGTTATTGACTTTATAAAATGGACTGTGTATCGGAATGATGac
tacacccctgtgtcacagatccgCTGGGACccaagccccactggaaaatt
tggtaaaaattgttaaagaaaaattaattttttgttggAAAAGTATCTGA
TAATTGTGTAAGTGTTCAAGGGGTCGTACAGTTGCTCCATGACACTTTGG
TGAATAATAACTGCCATATTGGGAAAATCTTTGTCACATCACCACCAGTC
TCACCACTACTTAACCCGCTGTCGAGTAACTGTTTTCGTTGCTCAAAAAA
TGTTACACTGTACCATAAAACGGGTAATTTACTGATTTTCTAGATATGTA
AAGTTATACATACTCCTCAAAATCTGTGTTTAAGAACGGTTGGAGTAAGT
TTAAatcccgggggaggggggtacttaggcaaaaatgtatgatgggtatg
tgcagacggtaagggtcgattttttcatctttcaaaggTTCTCTAAGGGC
CGGAAAAattagaaagttttaaattagtctctctaagggtcggaaaattc
aggatttttaggaaattttatgatttccagaaaaaaaattgtaataaagt
ctcattttaagggtatgacttttttcaaaaaccaaaaaaaaattgtaata
aggtctctctaagggtatgacttttttcaaaaatcgaaaaaaaaattcaa
aaagtctctctaacaAGGGTcgccttttcagcaaaaatcagtctctctaa
gggtcggaggTCCCGCatatacccctcattcgcccaCCTTAGTACCCCGG
GGTTTAAATGACtttgaaaacattcacaaatttttttctcatagGTTTGA
CAGAATACATTGAGATGAGGAAGATTTACAGATATTATTTacctcaaaaa
ataattttttcttcgaaatatttcaaattttctgcgTTAATTtgggaaaa
ttaatttttcaaaaagtgaaaaaatgtaCACTTACTCCACTTCGGAATAA
CGGTATTTAAGATTTTTAACTGTCATggtaactgcatgacccccctgCAT
TTCGTAATATTGGTCACTTGGTCGTGATTTTGTTTATTCTTAATAAAGCG
ACTGAACCCAGCTCTATGCATTCTTTGCAAGTTCAAGCAAAGTGAAAAAG
GTTACCAACATAAAACACCAGACTTAACCATCGTAAAGGCTTtcgttttt
ttcgcgttggtgcaatgcaacatgctccatcccaccaacctgaaacgctt
tctcgtgtctccaccccatttttctttctaccaataaaagtgaaatctca
cttttttatccctgggacaatggagcaaaattgatttgaaagtGGATGCC
ATAATTCGGAAGCCAGACTGTGATTTCGGAAGGGCACTCGAAGAAGTTCG
AAAAGCAGTGCGCAATGCGAAACATGCTTTTTACAAAGGATCATTTTATG
TCATAAGTTCTGGTGGTAAGTGTAATTTTGACTTATTAAGTCGCttataa
aaatccaattttccgGCCGCTTTCAATGCCGAATTAATTGGTAGCCTAGG
TTCAtagttttattttgtatttttacagCTACATACGCTTATGAACATAT
GTCACTGCAGACGCCTACATTGAAACCGTCCTTGATATCACAATTCATAT
AGGGAAATTTGCAAGACACACATTCCAGTTATCTCGGATGTTTTCAAAAT
CAGACTGCATGGTAAGTATGTCAAATTTAAACAGACATGTATAGTGATGT
TCaaataaaaatctcttttcGATATCCCCTTTAACAACACAATCTTTCTT
TAAATAATACCGTGTTCaatattttgttatttggagctttattttcttct
ttattctaGCTGATCCCCCAATTGTACTTCGACTCCGACATCATCGAGAC
AACGGAtggtaaatttttcaaatgatctAGCATGCAGTTCATTCCTTGCC
CATATAAGCCCGACGACTTTTGAAAGTTCTCACCAAGAATCTACAAAGAA
TACAACCGAAACATGAAAGTTAATTATTTTGGTGAATGCGTCTCAAAAAG
TATTAATACTTGACTAAAACCTACGACATTCTTGATCAAGTTTTACCAGT
GTTTATTGCCCGGCTAGCTACCAATGAAAACTGAAAAGCCCATTTTGGTT
GGAGAGAAAAATTCCGGGAAAACCTCTATGGTTAAAGTCATCACTGCCCT
TACCCATCTCAAGTGATTCAACCAAACTTGCTAAAGTGGACTGATAGATT
GGAGCATTTAAAATGCACTAATAGTTTTTGCTTGTTTACTTACTGTAAGT
ACAAATGTATCGTATTAAGTTGCAGTTGgttgatatttgatatttgatac
CTACCATCAACAGCCCTATCTTTTCACTTCGCTGCCAAACATGAATTTCC
AGTGTACTTTAAccgaatttttaaaataaatacttttaaaaaacgaaagt
gaaacaaGCGTGCAACAAAAACCATAACAAATGAAATGACAACTGTAAAC
AAATTGAGGACCAGAATATTAGAGGAAAAAACCGAGGGAAAAGTTAGGCA
GGAAAGTGAAAAGATAGGGGCTGTTGACGGTATTCATTTGATATTCTCGC
AAAAGTCAGTTTTAATAGCAAACATCGCAAGTGAAGACCTTTACCTAAAT
ATACAAAATGAAATAGTACAAAATTGTGAGACTGCAAAGATATTAGGTGT
AACTTTCGATAATTGTTTAACCTTTGAAACGCACATCTCCATATTGTGCA
ATAAAGCAGGCGAGAAGATCAGTGCGTTTGCAAGAATTGCTGGTTTCATG
AGCcttgaaaaaagaattaagatcgtaaatgcttttttaaaaagCCAACT
CAGCTATTGCCCATTGGTTTGGATGTTTCATTATAGGAAATTGGAACATC
GATTAAATATCACCTTCATGAACGTTGCTTGAGAATTGTGTATTCAGACT
TATAATTGATGATTCCTCAATcgtaaagtttctttttgatattttaatag
ataaattaaatattttcacttaatagATTTCACTGTTacaaaaatcaacc
ttttttctttctaaatcttattttcttgttACACTTTTACCTGGATGTGG
TCCAAATTTCGGGTTTTCTTTTTATAGggtcgatttaaaaaaaaaaggaa
acaagttttaaaaaatattgttcCGTGATTTGTTAACTCTGATTTTGTGT
CTGTTTGTTGATTTGTTAATTAGGTTACTTTGGAAACGCAATCAAAAAAT
AAGTGTCTCTTAATATTTGGAAAGAGTTCTGCAATTACATACATGCAATT
AGAAAGGAATTCTAGACTTAATTGAACAGATTTCTAAATACTAGAACTTC
CGGGCCCTGACTCTCCTTCGCATGTTCAAAATCTATATATTATAAGTTTA
GTGAAATTTGAATGCTAACGCATAagtctttgctttatatttacCTAAAG
TCTTTCGATGTATCTGTCATCTAAAAGAAATATTTGcattaaagtaaata
ttttctttgccccatataccttaaaggaagaaattttggcgggaatttaa
tttggcggatgaccgaaaaagttttttcagagggaatttaatttggcggg
tagCTGGATATTTTTGGCCAGAAGCGTTattgaataagaaaaaaaaactg
ttttaaggcttgaaatagcatGAATTtggggaatgcgtgaaataaattaa
attttgcgggaatttaatttggcggatggaggaaaaaataaattttggcg
ggaacttaatttggcggaatttggctaaatccgccaaatccgccaaattt
tctttccgccaaaatttcttcctttaataaGTATCAAGCTAGAGGTCATT
CACTATCTTTGAtttaattataagaaaacatgTAAATATTCAAGTCAGTT
ATTCTTATACACTCCTGTCTCCCTTATAAAGATCCAATTGGCTAAAACGT
TATTTAAACGCTCTTCGAGATTAAATATAcattaatgggataaactttcg
cggggattaaatttcgcggatttgggtgtcatccgcgaaaatccgcgaaa
ttaaatctcattggaaatttgaaagggcctcatccgcgaaatatttctaa
acaaaactcaaaatgtcaaataaatactttttgaatggttacttgcatca
aaaagGCGCAAAttatgtgtatttcaacaaccaacatgtatGATTTGACC
GTGAAATTCACAAAATCATGAAAGTATtgacacccaatagtgccaAACGC
GAatgcccaaccgcgaaatttaatccccgcgaaagtttatcccattaaag
tactaaAATTAAAGTACATTCATTAActgtatccttttgtattatcataA
TACTTCTTGAGATTGGTTCGTAGGGATTTATATTCAATaactataataat
atttttgtcaaataatttCACTTTATCAATAATAATAGGCAAAAATTCAA
TTGGTACCATCAAAAATCCGCTAGGGGGgtcttggcccttttttagtacg
gtattacgggatttgacgaaaaaaagacgggacgacggtattttaaaatc
agacagtgacggtatttggccttattttttgtcattgtgccggtatttga
acctgtacaaaccggtgtgatggtgttattatttttttcaattttcggga
ttccgggatccAGCTTCATTTAAATTATATATTGTTAAATAATGAGTTGA
ACTGTATTAGCCTGCTGTTACGAGTAGAgctatttttatgttttaacttt
atctaaatttttttctcattttgtatCAGATtatatgtaattaaattttg
GCATTGGACCAAAATAATGTCCTAAAAATGTATACCAGATATGGACAGAC
AGTTCAAAAAGGGCGTGCGATGAAAATGCTATACGACATATGTTGAAATG
GCTTTTGTGAACACTTCCCCGCAGagcattgaaaaattgttttcttcatC
TGTATAAAAGGAAAGTTGGTTCAGTAATATTATCAAACAGTTTCACCAAG
CCTAAAACAAGAAGACTTGGGAAGCAAGCAAGACACACACAGTACAAAGA
AACTTACTCAAGGAAAAACGATGGAAGCTATCTCTTTCAAATTGGTATGG
GTCTCTATTTTGATTGGATGTATAGGTGGGGTTTTCAAagatgctgaatc
agcaaatcCACCAGCAGCAGCTTACAATTTAAGAATCCCTGATAAAGCTT
GGAAAAATTGGGCTcaaaaatttgagaagaaatataaagatgaaaaagag
gaaaaagaaagatttcaaatttggaaacAAAATGGAAAATATGTTGTGAA
TTTCAATCGAAAACAAGATAAAGAGCCTGGGAacaataaaatgaaattga
agatGAACAAATTTGGTGATTTGACAAATGAAGAATACAGGTTTGACTTT
GTTAAGattcaaatttatgaaaattatgACTTATGAGAGATGCACAGGCC
AAAGTTTTCAGTTCTGTTACATCTGCTGATACCTTTTCGGTAAAAGCTTA
GTCAGAgaaaattttagtcacctcccTGTAACCCCtgctaaaactggcct
tcctcAAGTCAGGATGACCACTCAGAACTTATTCAAATTCCAGGGCTTTT
CCAGAAGCgtttcctattgataaaaaattcttaagattttgggataGAGT
ATGACCCAAAAATAATCTACTTATACCCAATgcttttcataatttttgtg
aaaaccaAGGATTGGAagacccaccatggttggatCTAACCAAAAGAATA
ATTCAATTTTACCCTCTTTTgattggccaaaatttccatTAGTATACTGT
AGACTGGGCTAAAAGAGGGGAGACGGCTAAGCGGAGAGATCAGTAAATTA
AAACCGTTTATGGTTTCGTATCATCGATAAACTTATATTCTTAATTTCAA
CTATTCATGTCTCTTTCAATATCCGTCTTCATTGTTTAATTCTGCAGCTT
TTATAGCTGTGAACGGAATGTCGTTAGTTCTAATTCTGGTAACAGATATT
GGCCTTGGTCCGTATGTATGTCATTTGTACGTTTGTTGCCTTGTTAGTTT
GCGGCGGTTTAATCGTCGATCGTTATATAAGATATAATTTCAGCATGTTT
CAGCATTTGCGTAGGTTTAATCGTCGATCGTTATGAGATATTGGTCTTGG
TTGAACCACTTTCTGGGGCGGCCAGCTGGCTTTAAGCTCCAGCTGACAGT
ACAATACAAAGTTACAACCGATTAAAGCAAGAAACTTTCTTGTTAAAAGA
GTGAGTGAATCTTTAATCTCCACCCTTTTTCACAGCCCATTAAGCTCTGC
CCCCTGTTCAATATTGCTTCAAACTATAACTCTAAGTCGTTATCAGAGGC
CCCACCATGggaagaaagtttttgaaaatgatctCTGTATTGCCTCATAG
GGGGGGGTTGTAGgtgttcgaaataccgttttcccgtcaaaatttttgct
gaatcccggaatcccgaaaattgaaaaaataataacaccgtcacaccggc
ttgtacagggcaaaaatgggcctaaataccgtcaccgtctgattttaaaa
taccgttttcccgtcaaaatttttgctgaatcccggaatcccgaaaattg
aaaaaataataacaccgtcacaccggcttgtacagggcaaaaatgtgcct
aaataccgtcaccgtctgattttaaaataccgttttcccgtctctttatt
cgtcaaatcccgtaataccgtactaaaaaaaggccaatcccgtcacaccg
taaaagtacaaaccccccgcTCATAGCAGCATGGAGCCCTGGAAAACTTG
AGTTTGAAGAATAGAAATCTAGTATTTTTagtatttaagtatttttacaC
CATTTCCAAGTGTATACTGGAAAAAGACCcactttttccaaatttccaga
ATAATCAATAAGTACCAAACTTTTATTACagtatattcaagtattttcaa
gtttttccaTTATCAGTGGTCACCCTGGATAAGGTAATCACTACGTTCTT
TTTACCGTGTTTACCGTactttaattttatttcttgGTTTTATATATAGA
AAATTCTACTTGAATTCCAAGCTGCAATCCTATGTTAGACCACGTGACAT
CAAGCAACGTACATCTCAAAGAAAACGCAGGTCAACTACAACAGTAGAAA
AAGACTGGAGAGACGAAGGAAAAGTTACCCCCGTTAAAGATCAAGGCAGC
TGTGGAAGCTGTTGGGCGTTTTCTACGGtataaaattaatattttagGTT
CCAAAGGGTGAAAGAATGCAATTTCAAAATCGATATCTGTTTTGTTCTCA
GGTCATTTTTATGTTTACATGTGAGAGCAGGTTCAAAGATTCGGGGCGCT
AGGGCGAGACAAATTGCACAAGGGGAACTAGAAAACCTTCATTTTTAGGA
AGTTTTTGAAGTTAGTGCTTCTTGGGCGAAAACCCTGGGGTATATAGGCA
AGTGAAGAATATAGGGATGTGCAATCGTTTAGTTCGGAAAGTCAGTTCGC
AAAACACCATAatattaagcagttattggacaaagtcgaatccaatatgc
aaaaatattgggcgtgcgagaaaagatattggacgaggcttcgccgagtt
caatatcttttctcgtagcccaatatttttgcatattggatgagactgcg
tccaaataaatggtttattatccgttcatcgctaaaatatttctcgtttc
caagcataattccaatttataagaCCGTTaatctggtttcttggtagctt
tttattcaaaagtcttatttttattttgtgacgtaacgtcaaaaagaaga
tgctcaattgtcattgaactcgttgtgtgaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtca
atttttgaaatatgtagcctccatggaagctatatattcaaaaatattgg
acagcaaagaagccaatcaaacgtcgctatttacgcgcgtcggataataa
tcTTAAATATATTCCATACCAATGTCCCCATATTTTTACATGGAAAATAT
ATGCCTTAAACTAAAGGAAAtcattttcgcgggaactaattttcacgttt
tttcgcggtttttcttTTCCAAACCCGCAAAAATGAGCCCGCTTAAAAAT
TTACGAGCTCGAAactgcaaaaattaattcccgcaaaataCAGTGGTGAC
CCCCAGAATGCAGGTCTATATCATTCTCTCAGATAATTGATTACAAGTCG
CAAGCAAGTTTTAgaagtcttttgattgattgaGTTTTTAAAAAGgctac
atttttttgaaaattaaagcaGATTCGGtcaaattttgtattcttttgCA
CCTTAATTTTGCAGTTTTGAGGACTTTGAGAAACgatatttttaggaaat
ttgaCTATCAGGCGTGATTACAGTTACATTGTAGACAAGTCCTTAAAATA
GGGTATAGGAAGTTGCGTATTTATAGAAGGAATTCAGAGAAAATAATTGG
AAACAAATTCGTATTGTGGTATTTTGTCCAAAGCCGACGAATTGACACCA
GCATTATGGGGgtcaaaagatttaaaaaattgacgtAAAATAGTGTAGAG
GCCCACCAATTCTTAGATTCCGTGACCacaaaatataatttcttttttat
tttaaagaataaTGTATTTAGTAACATTTTGGGAGAGGAGGAATGTGAAA
AAATAATGTACAACAGACTTTACGAATATTTAACTAGTAACGACATActa
tacaaaaaacaattcgGCTTTCAACGTAAACATTCTACAGAACATGCTTT
ACTAGGATTAATCGACGAAATTTCAGACTCCTTCGAAAGAAATGAATTCA
CCATTGGTGTTTTCATTGACCTATCAAAGGCTTTTGACACTGTTGACCAT
AACATACTGACAGCAAAACTTGAACGATACGGAGTGACTGACAAAAACTT
AGACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNaaaaaaaaaaaaaaaaaaaaaaaaaaagttagat
gGTGGAAAATGTTTATGTGCCAAAAAGTGGCGTCATAGGCAAAACTGTAA
AGGGCCATTATAAAAAGGTCGATTTTGCAAAGTCAAAACAAACGGAAACA
ATTGATACCATCTGATAGAGCtagaaattctgagcaaaaaaatgtattac
aacaagTCCAATACTCAAGCGTATCAAGAAATACAGCCCTTTTAAACCAA
AAAAGGGTGATTtaaccaaatttgacaaaaaatgagaaaatagaAATTGA
CGGAATCTCAATTGAGACACAAACGAAAAACTTCTAATATATCTTAATTT
AGTGATGCATTAGGCTCAGAATACAACAATATTATNTTATTTTATGCAGC
AAACGAAAAACTTCTGATATATCTTAATTAAGTGATGTATTAGGCTCAGA
ATACAacaatattatcaaaatatttcgaAGTGTCAagattttgatcaaca
aaagGTAACCAAAATAGTCAACaattctattttaaaaacctttgaaatTT
ATCTTTTAGTGGaccttaaaattttaagaaaactatcTAAAGTAGATTTT
TAGAAATCGACAAAAACATCAACCAGCATTCTGAGGGGCggtaaaaatga
aattcactttgtgacgtcattttaattCGCAAGAAATGATACTTAAAAGT
GTTatttcgagaaaaaaacatttgggAAAGAATCTTAAGATGCTTGAATT
CGTAGATACTAAACACCGAAACGGGTGGGAAACTAGTGGAAACGAATGCA
AACGGGTGGAAACAAATGGtgaaacgagtggaaacgagtggtgaaacggg
tggaaacgaatgaaaaacaactggaaACACAGTGGAAACGAGTGCTAGGG
GGTAAAGATAATTTGGCATTCGCGTTCTATTCAGGTTCTAATGGTGATTG
GTGTCATATACTTGATGGACCTTTACGTTTTGGCGAAAATATATTGTATT
AAGAAGTATAAAAATGATGTTTGGATAAACAAATTTTCGTTACTTTTTGC
TCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtgcaggcatatcataaaatccagctaaaaccctgtaaaatcccaaaa
tcttaaatttagcataacttttgatctaggcatccaattgacttcaaatt
ttgacaggctttaggtatcaatgataagttttcaaaaattttttaaaaaa
tttcaaaaactgctgacgtcattataaatgacgtcattgttttttgaaat
aatttactcattttctgcatggattttaagcctcgattttattagtatat
ttaaaaccggcaaatatgttaaaggtattctttttggcttttagaaattc
aaaacagaattgaaaaatctccattctttcgtttttaattgctattttat
tgaatagtactttttcattggtcagcgataattgtgaaactttgtgatga
cgtcatcacctttatgatgacgtcatcaacccaaNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNacatttctgccaaatttcaagtccataccttttct
agataaaaagttatgcaaggctggtggaaaacacccccccttgagaatac
aaaatacgaaaaagcctgataataatagggttaaagatACAATTTTATAT
AAAGTGATAACAGCACACTCATgggattttgaatttattaaaaAGAGTAT
TGTTGCattaaacagactgtacctttataaccataaaggttggcgagtcc
agtcaaaacacagatttgatctgcagcgtcacgcttcaccttgccTCAAT
AGTTAactcaaattgaaacaaaccattgccaaacaaactctggtagtttt
tttattatttcagagaAGTAAATGCTATGTTATGGCACACAAATTGTTGT
GTGTTTTTTCCCAAACGAATTCCAATTAGAGAAAATCTTTATTTCGATTG
GGATAAAAAATGTGatctaaaatatattaaaaaacttACCGCTTACAAGA
CTTCATCTTTCCTGACAAACACCGTAAACAAGCCAAGATTGGTCGCTCTC
GCTGAAAGTAAACAAACACTGTAGTTAGTGTTATAGTTTGGAATGCAAAA
AGCTACTTGTCTTATTAGGAAAAAATCTTCCCTTATATTAAAAAGACTTT
GCAGTGATCATTCACATCCtaagaaaatatcaagaatatatGCTTTGCAG
CAACAACCATGTTTCTTTGTCATAAAAAATCCAACCATAAAAAACATACa
acatcaaaacacaaaagtatctgaaatactggatttggtttcaaatgaaa
ataagcTGCTTTACTTACTACCGAAAAGAAAATCGCTTCCATTCTGTTAT
CAAAGCAGCGTTCTGTTTTTAACAATGTTTTAAGaggcatttgaaaaaaa
tttattagttTGATATGAACCCCTAgcactcgtttccactcgttttcatg
tgtttccagttgtttttcattcgtttccacccgtttcgccACTTGTTTCC
ACTCGTTTCACcactcgtttccacccgtttgcaTTCGTTTCCACTAGTTT
CCCACCCGTTTCGGGGTTTAGTATCTACGGCTTGAACTGTCTTCAGAACa
aacattttaaatttatttgcaAAGCACAAAAAATGAGAGCAAATGTAAAT
TTGACCAGCATTCTGGTGGTCCACCACTCTAATTGAAAAAGTGCCATAAG
AGAAAATCGATAACAGATTTCAAAGCAAATAATTTcaggcttttttcttc
tgaaacaTGATTTTCAGAAGGTAATCAAagaataaaaaaggaaaatagaa
aataatagGAAAATAGAACGCGGAATTTAATTCCCGCTAAAAATTCAGAA
TCAAGTGAATCACGAAAATTAGGtcctggttttttttttttgaaaattag
ttcccatgaaaattagttcttttaaaaaGGTAAATTTCTTCTTATAAACA
GACTGGGACGATTGTATCTCATTATGCTATCAAACACGGTCCATTAATTC
CATTAAGTGAACAGCAACTAGTTGACTGTTCAACAGAAAATAGTGGATGT
AATGGCGGTGTTGTTCAATGGGCATATAATTATGTCAAAGAAAAAACTGA
TGGACTTGAATCGGGACATCAATATCCGTATGAAGCTATTGTAAGTAACT
TtcaataccaacttttttttcattactTCACTGCCTTGTTCTGGAAACGT
TGCTATGATAATTAGGCAATTGGTTCTCAAATGAGTTACAGTATAAGAAG
TGTGTTCTATTTCCAATCTCTGTGAATGACTGACGGAATTACAACAAACT
CACGGttttaatataacaatagcgttcagtttgaggtcgttgttgttatt
ttctgcccgcgtagtttcattattcgcccgatagtgtcatttgggcccga
cgcgaagcggagggcgcaaatggcactagagggctaataatcaaattgCA
AGGGTAGAATTAATGACATcaacgaacgaaaacttaacgctattactatt
attatccatatcagacattcaaacaacgtttttttctagcgtcaaccAAT
TCTTTTCGCttaatgcaatgtcttcaacaaatttttagcaccttgcgagc
gggctgcaaatgaccaaaaagtgtttttttctgacgttagtttagtctct
tcgcttcaatgcaacgacttcaatcccattccgagcgggccgcaaatgac
gttattgccCTATACCCGGGCCGTTAATGATATTTTAGCCCTCTGATGCC
TGGCGCTTTAGTTTCCTCAGCGTgggtatgacaatttgagtcacaaaacc
tttcaataccaCCCACCGATTGAACCTTTAACGgtttacttaatgaccgc
tatatggataataattatGATTATGATATTCTTTTCTAATAcccttttta
tttttcaggacaATAATTGCAGATATGATCATTCCAAAGCTAAAGTCACA
ATATCAGGTTATAAAGATATTCCCTTTGCGGATGAAACGGAACAAGTCGC
TGCTTTAAATAACCATGGCCCAATTTCAGTTTGCATTGATGCCGGTCATC
TTTCATTCCAACTTTATTCGAGCGGAGTTTATTATGAACCGAACTGTAAT
CCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015917-exon-sc0000222-1491911889:391344..391638 | TCONS_00015917-exon-sc0000222-1491911889:391344..391638 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1510915933:391344..391638 | TCONS_00015917-exon-sc0000222-1510915933:391344..391638 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1575043694:391344..391638 | TCONS_00015917-exon-sc0000222-1575043694:391344..391638 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1491911889:393222..393354 | TCONS_00015917-exon-sc0000222-1491911889:393222..393354 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1510915933:393222..393354 | TCONS_00015917-exon-sc0000222-1510915933:393222..393354 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1575043694:393222..393354 | TCONS_00015917-exon-sc0000222-1575043694:393222..393354 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1491911889:393503..393937 | TCONS_00015917-exon-sc0000222-1491911889:393503..393937 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1510915933:393503..393937 | TCONS_00015917-exon-sc0000222-1510915933:393503..393937 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1575043694:393503..393937 | TCONS_00015917-exon-sc0000222-1575043694:393503..393937 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1491911889:398693..398870 | TCONS_00015917-exon-sc0000222-1491911889:398693..398870 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1510915933:398693..398870 | TCONS_00015917-exon-sc0000222-1510915933:398693..398870 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1575043694:398693..398870 | TCONS_00015917-exon-sc0000222-1575043694:398693..398870 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1491911889:405245..405433 | TCONS_00015917-exon-sc0000222-1491911889:405245..405433 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1510915933:405245..405433 | TCONS_00015917-exon-sc0000222-1510915933:405245..405433 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1575043694:405245..405433 | TCONS_00015917-exon-sc0000222-1575043694:405245..405433 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1491911889:406202..406397 | TCONS_00015917-exon-sc0000222-1491911889:406202..406397 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1510915933:406202..406397 | TCONS_00015917-exon-sc0000222-1510915933:406202..406397 | Clytia hemisphaerica | exon |
| TCONS_00015917-exon-sc0000222-1575043694:406202..406397 | TCONS_00015917-exon-sc0000222-1575043694:406202..406397 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000222 | supercontig | sc0000222:391344..406397 + |
Blast
BLAST of TCONS_00015917 vs. Swiss-Prot (Human)
Match: CATL1 (Cathepsin L1 OS=Homo sapiens GN=CTSL PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 4.714e-42 Identity = 77/154 (50.00%), Postives = 101/154 (65.58%), Query Frame = 1
Query: 967 DWRDEGKVTPVKDQGSCGSCWAFSTTGTIVSHYAIKHGPLIPLSEQQLVDCS--TENSGCNGGVVQWAYNYVKEKTDGLESGHQYPYEAIDNNCRYDHSKAKVTISGYKDIPFADETEQVAALNNHGPISVCIDAGHLSFQLYSSGVYYEPNCN 1422
DWR++G VTPVK+QG CGSCWAFS TG + K G LI LSEQ LVDCS N GCNGG++ +A+ YV++ GL+S YPYEA + +C+Y+ + +G+ DIP E + A+ GPISV IDAGH SF Y G+Y+EP+C+
Sbjct: 119 DWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQD-NGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270
The following BLAST results are available for this feature:
|
