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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015995 ID=TCONS_00015995|Name=TCONS_00015995|organism=Clytia hemisphaerica|type=transcript|length=409bp
ATGATATTGACGAACGTTCTCGTTCTAATAGCATGTTATGCTTTTTGCAT
GGTTTCGTTTAATGGGTCTGTACAAGGGGCGACGGTGGCAGAAACAGCga
agaaatttgaaaacagcTTTATTGAGTTAGCTAAACCAACACGTCGACGT
GGGCGCGGAAGGCCAGGCTTTTCAATTCCTGCTGACCCCGTCGACCTTAT
CTTTGTCATTGATCGATCTGGAAGTATTGGACAAAGCAATTTTGGTCTTT
CACTTAAATTCGTTGAAGAGGCATTGAACTATTGGAGTGTTTCACCATCA
ACAACCCGAGTGGCAGCAATTTCATATTCACACAGCATCCGAAATGATTT
CCTGTTTAACGCACATGTTAATAGAGAATGTGTGGTGAAAGCCGTCAGGG
AAATAGAGT Run BLAST on NCBI protein sequence of TCONS_00015995-protein >TCONS_00015995-protein ID=TCONS_00015995-protein|Name=TCONS_00015995-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
MILTNVLVLIACYAFCMVSFNGSVQGATVAETAKKFENSFIELAKPTRRR
GRGRPGFSIPADPVDLIFVIDRSGSIGQSNFGLSLKFVEEALNYWSVSPS
TTRVAAISYSHSIRNDFLFNAHVNRECVVKAVREIE Run BLAST on NCBI transcript from alignment at sc0000224:60472..62334- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015995 ID=TCONS_00015995|Name=TCONS_00015995|organism=Clytia hemisphaerica|type=transcript|length=1863bp|location=Sequence derived from alignment at sc0000224:60472..62334- (Clytia hemisphaerica)
ATGATATTGACGAACGTTCTCGTTCTAATAGCATGTTATGCTTTTTGCAT
GGTTTCGTTTAATGGGTCTGGTAAGTTTGCAGTTCAACCCGATCCTATCT
ATTCTCATGACCTCAATGCACCTCTGCCAAAATCCAAAATCGGCTGCTTC
AATCAAATAGTAATCCCTTCAGGATCGTCCATTATTAGGAAAGATAATCA
AATTTTGAGAAAAACGGACTGATTTGATGTGTGTATTGCACTAATAAGTC
GATGAATTTTGTCTAGTTTAAATTTGCCACTACTGGCTAAAACAGGGGTA
TTTCCGTAGAAAACATTACGTCATGAATTTAAAGGTAGTACTCTGGTAGA
AGAAGGGGCTAAAGTTTACAACCGATCATAAGCAATCAAAGTATGAGAAA
TCTGATATTGAGAGTTTGAAATGAACCAGAGAAACAAAAAAGTTTTGGTC
TTAATGAACTAAACATAATTTCTGATTATTTACCTTTTCAGTACAAGGGG
CGACGGTGGCAGAAACAGCGAAGAAATTTGAAAACAGCTTTATTGAGTTA
GCTAAACCAACACGTCGACGTGGGCGCGGAAGGCCAGGCTTTTCAAGTAA
GTGGAAAGGACCTTTTTTTATATAAAAAATTGTTGTGTAATAAAATTTGA
GTTTTCTGAAAACCAACATTTTTTTAGTTATGGAAAATTTTGAAACTGAT
TTATAAGGGTTTGTTACCGGAAGGATATTTATTTTGAACATTATAACTCA
TTGTTTTTAGTTCCTGCTGACCCCGTCGACCTTATCTTTGTCATTGATCG
ATCTGGAAGTATTGGACAAAGCAATTTTGGTCTTTCACTTAAATTCGTTG
AAGAGGTATTAAATTGTTATTAACACTTACTAATTAATATTAATACAATA
TTACCCTAGAAATTATCATGAACTAACTGTGAGGAAGTATTTCTTTCGCT
TGCCCTAAATAAGGACCTCTTTTACGCCGGCCCTTATTACGCCAAAGCTA
GTTTTTTTACATTTTTTAACCCGGACCTGATTTAATTCTGATCACTAACG
ACCACCTTACTGCGCCAGCGACGTAAGAATAGCGTCAATAAAGGCCGGCG
TAAAAAGGGCCGATAAGGTAGTACTTGATATGTTGATGTTATTTAGAGCT
AGGAAACTATGCTAAGCTTTAAGATGTCTCAAGACAAGCAACATTACAAA
TGAATACCCCTACTCTCGGGTACCTAATAGCCGACCCCCCGCTAATTAAC
TTTTATACCCCCCCCCCCCCCGCTTATTAAGTTTTGAGATTTTTTCCACC
CCCCCCCCCCCGCTTATTAAGTTTTGAGATTTTTTCCACCCCCCCCCCCC
CGCTTATTAAGTTTTGAGATTTTTTCCACCCCCCCCCCCCCGCTTATTAA
GTTTTGAGATTTTTTCCACCCCCCCCCCCCCGCTTATTAAGTTTTGAGAT
TTTTTCCACCCCCCCCCCCCCGCTTATTAAGTTTTGAGATTTTTTCCACC
CCCCCCCCCCCGCTTATTAAGTTTTGAGATTTTTTCCACCCCCCCCCCCC
CGCTTATTAAGTTTTGAGATTTTTTCCACCCCCCCCCCCCCGCTTATTAA
GTTTTGAGATTTTTTCCACCCCCCCCCCCCCCCCCCCGCTTATTCCAAAC
CCCCCGGCTATTAGGTACCCGAGAGTAAAAAGATAAATTTTCAAAGTTTG
AGAATAGAACTTTTCTTCATTTAGGCATTGAACTATTGGAGTGTTTCACC
ATCAACAACCCGAGTGGCAGCAATTTCATATTCACACAGCATCCGAAATG
ATTTCCTGTTTAACGCACATGTTAATAGAGAATGTGTGGTGAAAGCCGTC
AGGGAAATAGAGT Coding sequence (CDS) from alignment at sc0000224:60472..62334- >TCONS_00015995 ID=TCONS_00015995|Name=TCONS_00015995|organism=Clytia hemisphaerica|type=CDS|length=1632bp|location=Sequence derived from alignment at sc0000224:60472..62334- (Clytia hemisphaerica)
GCATTGAACTATTGGAGTGTTTCACCATCAACAACCCGAGTGGCAGCAAT
TTCATATTCACACAGCATCCGAAATGATTTCCTGTTTAACGCACATGTTA
ATAGAGAATGTGTGGTGAAAGCCGTCAGGGAAATAGAGTTCCTGCTGACC
CCGTCGACCTTATCTTTGTCATTGATCGATCTGGAAGTATTGGACAAAGC
AATTTTGGTCTTTCACTTAAATTCGTTGAAGAGTACAAGGGGCGACGGTG
GCAGAAACAGCGAAGAAATTTGAAAACAGCTTTATTGAGTTAGCTAAACC
AACACGTCGACGTGGGCGCGGAAGGCCAGGCTTTTCAAATGATATTGACG
AACGTTCTCGTTCTAATAGCATGTTATGCTTTTTGCATGGTTTCGTTTAA
TGGGTCTGGCATTGAACTATTGGAGTGTTTCACCATCAACAACCCGAGTG
GCAGCAATTTCATATTCACACAGCATCCGAAATGATTTCCTGTTTAACGC
ACATGTTAATAGAGAATGTGTGGTGAAAGCCGTCAGGGAAATAGAGTTCC
TGCTGACCCCGTCGACCTTATCTTTGTCATTGATCGATCTGGAAGTATTG
GACAAAGCAATTTTGGTCTTTCACTTAAATTCGTTGAAGAGTACAAGGGG
CGACGGTGGCAGAAACAGCGAAGAAATTTGAAAACAGCTTTATTGAGTTA
GCTAAACCAACACGTCGACGTGGGCGCGGAAGGCCAGGCTTTTCAAATGA
TATTGACGAACGTTCTCGTTCTAATAGCATGTTATGCTTTTTGCATGGTT
TCGTTTAATGGGTCTGGCATTGAACTATTGGAGTGTTTCACCATCAACAA
CCCGAGTGGCAGCAATTTCATATTCACACAGCATCCGAAATGATTTCCTG
TTTAACGCACATGTTAATAGAGAATGTGTGGTGAAAGCCGTCAGGGAAAT
AGAGTTCCTGCTGACCCCGTCGACCTTATCTTTGTCATTGATCGATCTGG
AAGTATTGGACAAAGCAATTTTGGTCTTTCACTTAAATTCGTTGAAGAGT
ACAAGGGGCGACGGTGGCAGAAACAGCGAAGAAATTTGAAAACAGCTTTA
TTGAGTTAGCTAAACCAACACGTCGACGTGGGCGCGGAAGGCCAGGCTTT
TCAAATGATATTGACGAACGTTCTCGTTCTAATAGCATGTTATGCTTTTT
GCATGGTTTCGTTTAATGGGTCTGGCATTGAACTATTGGAGTGTTTCACC
ATCAACAACCCGAGTGGCAGCAATTTCATATTCACACAGCATCCGAAATG
ATTTCCTGTTTAACGCACATGTTAATAGAGAATGTGTGGTGAAAGCCGTC
AGGGAAATAGAGTTCCTGCTGACCCCGTCGACCTTATCTTTGTCATTGAT
CGATCTGGAAGTATTGGACAAAGCAATTTTGGTCTTTCACTTAAATTCGT
TGAAGAGTACAAGGGGCGACGGTGGCAGAAACAGCGAAGAAATTTGAAAA
CAGCTTTATTGAGTTAGCTAAACCAACACGTCGACGTGGGCGCGGAAGGC
CAGGCTTTTCAAATGATATTGACGAACGTTCTCGTTCTAATAGCATGTTA
TGCTTTTTGCATGGTTTCGTTTAATGGGTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015995-exon-sc0000224-1575043694:62265..62334 | TCONS_00015995-exon-sc0000224-1575043694:62265..62334 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1575043694:61739..61843 | TCONS_00015995-exon-sc0000224-1575043694:61739..61843 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1575043694:61480..61574 | TCONS_00015995-exon-sc0000224-1575043694:61480..61574 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1575043694:60472..60610 | TCONS_00015995-exon-sc0000224-1575043694:60472..60610 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1510915933:62265..62334 | TCONS_00015995-exon-sc0000224-1510915933:62265..62334 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1510915933:61739..61843 | TCONS_00015995-exon-sc0000224-1510915933:61739..61843 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1510915933:61480..61574 | TCONS_00015995-exon-sc0000224-1510915933:61480..61574 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1510915933:60472..60610 | TCONS_00015995-exon-sc0000224-1510915933:60472..60610 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1491911889:62265..62334 | TCONS_00015995-exon-sc0000224-1491911889:62265..62334 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1491911889:61739..61843 | TCONS_00015995-exon-sc0000224-1491911889:61739..61843 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1491911889:61480..61574 | TCONS_00015995-exon-sc0000224-1491911889:61480..61574 | Clytia hemisphaerica | exon |
| TCONS_00015995-exon-sc0000224-1491911889:60472..60610 | TCONS_00015995-exon-sc0000224-1491911889:60472..60610 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000224 | supercontig | sc0000224:60472..62334 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002035 | VWF_A |
Blast
The following BLAST results are available for this feature:
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