TCONS_00016118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016118
Unique NameTCONS_00016118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1195

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016118 ID=TCONS_00016118|Name=TCONS_00016118|organism=Clytia hemisphaerica|type=transcript|length=1195bp
tcagtaaaaataagcaaaccataattcaaaaataattcaatatgCCTCCA
AAAGACCCAAAGCTTCGCAACATTACCATCAAAACTGGAGTTGTCAAAAG
GTTAGCAAAGGAGAAGACAATGTATGAAAAAGAGACAGCTCAGCAAGAAG
CCAAGATCGAGAAAATGAAAGCTGATGGAAAAGACGAATATGATATCAAG
AAAATGATCGAAGTGAAAGGAGAATCAGCCGCCATGATTATGGATTGTTT
GAACAGGTTGAAGAAAGCACACCAAGAACTCAAAACCATCCTTGACAACG
ATACAGATTACGCAGAGAGCGAAGAATATAAAGCAGCTCAAGATATTTAC
AGCGATGCCTCCTCTGTTATCTCCGCCTAAGAATGCCATCGAAAAACTAA
ATCTTGCTGACAAAGCAATTTTTAACGATTCTTAAAACACTAAAGACCTT
GTTGGACTGTTAAATAAAAAGTTGATTGGGATAAGGATGGTTGTTATGAA
GATCGCCAGCTTAACTGTCTCGTGATATTCAAGAATAACTGACACTAATG
CTATCCTGATTTTCAAGCGGGAATTTTCAACAATCTTGAATTCGAGATGA
TGTTTTTCGAAAttagacattttaaatttttgttcggTATAATGATACTT
TACTGGGATAAACTttcacggggattaaatttcgcggatgaggagTTCCC
TGATTTTTCGCGTAATTTCGCGGATCAGGATTAAGTCAAATTTTTCTAAA
GTGATTCCAAATTTGCAAACGGGGTAGCGAACAGAATTTCtcataaattc
aaaattttgatatggtaGAGtgcgaaaattcgaaaaataacGAAGTCATT
TTCTTCAAAGTTTAAGTAGTCTGATTTGCGGGACGAAAAAACAACGAtag
aaatttacaatttttgcggatcgaagaaagatttcaattttttttgcggg
tagttaatttcgcggatgaggtccttccaaatttccattgagacttaatt
tcgtggattttcgtggatgacacccaaatccgcgaaatttcatCCCCttg
aaagtttatcccattaaagtaaataTTGATAATTTATATACATTGTAGTA
ATTTTTATTTACGTAGTTTCACTTACATGTACATTCgaaaattctagaaa
aaaaaaatactaaaactaTTTTATCAAGATACGAAATGCTTTCGC
Run BLAST on NCBI

transcript from alignment at sc0000226:54039..66502-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016118 ID=TCONS_00016118|Name=TCONS_00016118|organism=Clytia hemisphaerica|type=transcript|length=12464bp|location=Sequence derived from alignment at sc0000226:54039..66502- (Clytia hemisphaerica)
TCAGTAAAAATAAGCAAACCATAATTCAAAAATAATTCAATATGCCTCCA
AAAGACCCAAAGCTTCGCAACATTACCATCAAAACTGGAGTTGTCAAAAG
GTATAATTCAAGATTGGTTATAAAAATTAACTGTTTGTTGAATAAATTTG
ATTTAGTTTTAAATGAATAATCTATGCAAAGTTATNGAGGCTTCGTTTAT
CAATTTCTGAATATTTGTTTTTGAACGGCAATCTTTTTATATTTTTGTAA
ATAGTAATCATATTTTTGTTTTAGGGCAATCAGAATAAAAGATACTTGCG
TTTTCTTTTTGCAGAATCTCACCCCAAATGCAACCTTAGTAAAAAATGTG
TTTCCTGGGTTGCAAGTGAAGGAAAAGGTTCTTTTTCTCTTCTTGATTTT
AGTGAAATATTTTCTCATCATAGCTGACTTTAAGAAATCCATTTGTTTTT
CTTAAAAAAATTAGGCTTTGTCTGACTTGGCAAAACACCCACTTTAGCAT
GTTACAATATTTTTGTCAAATCCATCAATTATTTTGTTTATTATATTTGT
TATATGTTCTTTATATTTTTCAGTAAAAATAAGCAAAACCTAATTCAAAA
ATAATTCAATATGCCTCCAAAAGACCCAAAGCTTCGCAACATTACCATCA
AAACTGGAGTTGTCAAAAGGTATTATTCAAGATTGGTTACAAGAATTAAC
TGTTTGTTGAATAAATTTGATTTAGTTTTAAATGAATAATCTATGCAAAG
TTATAGAGTGCTAAATTGAACTGAAAATCAAGTCACCTTAAAGAAAGAAA
TTTTTGATTGCAGATTTTAATTTTGCGGCTCACAGCTCAAAATTCGGAAG
TTTCGCAAAACTTAATTTCGCAGTTGAAAGAATTTTTTGTTCATGATACA
TGGCCTATTTTGCCCTGAAGAGACTAATTTCAGGGGTCATTTTTTAAGTT
CTGAAAATATCTGTGTTTCGAAGAATTTAATTTTGCAAATTTATCATAAA
ATCGCGTCTGCGAAACTTTCTTTCCTTAAGGTAGTTACAAGAATTATCTG
TTTCTTAAACAAATGTTGACTGATTTTGATTTAAATGAAAACCCATGCAA
AATTACCAAGAGTGCCAAAATTGAACTAAAAAAAAACAAGTTACAGCTTA
ACTTTATAACAAGTAGAGCAGTGTTTAATAGTTAGTCTGTCTGATACTCA
CAATACACTTTTCTTGAGATGATTTTGAAAAACATCTAAATATTACCAAA
GCAACTAAATTTGAACAAGACTGGCCTATGCAAAGTATATTATACGAGAT
GCTTGACTCTAAAAAATAAAGGAATTGATTGAAACAACCATAAAAAAGGA
ATGGAAAGAGCTTGTAATCTATCACCTTAAACCGAAACTAGGAAAAAATC
CATAATTTTGATAAAGCTGTATTAATCCATTAAAGGTTTTATTTTTACAT
AATTATTGTTCCCGTTTCATATCAGACACATTTCATATCAGGGCAGTGTC
TGCCTATTGTTATATTAAGCTGATATAAGCAAAAAATGTGTTTTTCTTTT
CCTCTTTCTGATCGATCTTGCTCCACATCCGTGTCAATCCAACGTGGAAA
AGCTTGTAAACTGAATTTGATGAGTAAGCAAACGATAATACTCTTATTTG
AAACAAAACCTTTAAGTGTCATCATTTTGTAACTCCAAACTAATGATAAA
ATTAATTCTGATGGGGTTAAAAAACAGGGTTGCATCGGTTGCAGTTCTCC
TAGATTTAGACCTACCGGTACAGAACTGAAAACATTCAGTGATCTCATAT
GATGAGGCCATTGGCACTGAATGGGTTAAACAATATTGTTTTTGTTTATC
CAGGTTAGCAAAGGAGAAGACAATGTATGAAAAAGAGACAGCTCAGCAAG
AAGCCAAGATCGAGAAAATGAAAGCTGATGGAAAAGACGAATATGATATC
AAGAAAATGGTATGTTTCTTTGATCAATTTTGGTCGTAATTTTTTGTGTT
TCTGACCTGTCGAAATTTGCCGTTTGCCTGGGCCTAAATAGTCTCTACCA
GTATAATTGTTTTCATTTAGAAAGGGTTGTCAGTTTCTGCTGTATATTAT
CAGTGTTGATCTCTGCTTAATCTGCCAATTACCAATTAGGCTGGACTTAA
AAAAATGTTGGTTTGTCGTCAAACCGATCGACTCGTCTCTAAACTTTCAG
ACCTAAAAACCTTTATTGCTATTTTGACGAAGAGAATTTTTTTCTTCAAA
AATTATAAAATATAGACAAAAATTTCATAATTGACCAAAATAAAAACATT
TCCGACCGACCGACCCACCTCCAAAATCTAGGGTCGGGTGACTGCAAACC
AAGAATCTTAAGTCCAGCCTTATATTTACATCTTTTTGTAAGAAAGCTAC
AACTGTCATATAAATTCGTATTATAGTTATACGCTTCTGTAACTCTTATA
ATAGATAAGTTTTGATTCTAAAATCTTGATGACTCGATTTTGATTTTGAC
GAAGTTTCTTCGCATGCATCAAAAGTTCAGTTGGAAGTATTTCTTTAATC
TAACTAAAATCCTTGTTTCAAAGCCTCTCCACATTCTTAGAGAAATTTTT
ACTAGGTTGTTAAGATAATCTCAATCAATTGTATCTTCCAACGAACCCAG
TACTTCTTGTATATCTTTATTATTCCATTGTCCAGAAGTGCTTTCACATA
ACACTTTGAACATATTCCCTGAGTTACTTCTCACCATCTTGACTGTTCTG
AATGTCTTAAAGGATTTGTCGGTTCCAAGTGAAGTCAAAGTACTGATAAA
CGAAGCAAGCAGTGAGTAGCTAATGTAGAATAGGATGATGTATGTCATGA
CCAAAGCCGACTGTGTTGCGCGACCAAGGCTTCTGAAGTAAGCCATGTCA
TAACGGATATCCCCGAAACCAATTGTGCTCAAACTAGAAAAAGGAATTCA
TTATTTTTTCTCGTTTTTCTTGGTGGGAAACTGGGTTATCACTAGATCTT
TACTTTTGGCAGCGAGCAAAAAAAACGATAATTAATGTTGCTAAGAGATG
TTTTAAAAGCTTGAGTGGAAAGCAGTCAAGTGAACGAAATGGAATTATCA
CCTTATATCCTAAAGGCTAAAAGCTGCAATTTTTATCTGTTAAATATTAT
CTTGACGGACTTAGACACTGAAGAAAATGTTAAACTTATCTCTAATTTAG
ATGGCCCACTTTTCGCCCTACCTATTCTAATTGTAAATTAAGGTGATCTT
AAAGTGTGCTTAAAGTGTGCTGTCTAAAGTCAATGCATTGCGCTCTTTTG
ACGTCTATGCAATCAATGTCTTTCAAACTTTTTGGACCTACCCCGGTGGG
GTGGAGGTCCTATAAATTAACCNTCGTATTATAGTTATACGCTTCTGTAA
CTCTTATAATAGATAAGTTTTGATTCTAAAATCTTGATGACTCGATTTTG
ATTTTGACGAAGTTTTCGCATGCATCAAAAGTTCAGTTGGAAGTATTTCT
TTAATCTAACTAAAATCCTTGTTTCAAAGCCTTTCCACGTTCTTAGAGAA
ATTTTTACTAGGTTGTTAAGATAATCTCAATCAATTGTATCTTCCAACGA
ACCCAGTACTTCTTGTATATCTTTATTATTCCATTGTCCAGAAGTGCTTT
CACATAACACTTTGAACATATTCCCTGAGTTACTTCTCACCATCTTGACT
GTTCTGAATGTCTTAAAGGATTTGTCGGTTCCAAGTGAAGTCAAAGTACT
GATAAACGAAGCAAGCAGTGAGTAGCTAATGTAGAATAGGATGATGTATG
TCATGACCAAAGCCGACTGTGTTGCGCGACCAAGGCTTCTGAAGTAAGCC
ATGTCATAACGGATATCCCCGAAACCAATTGTGCTCAAACTAGAAAAAGG
AATTCATTATTTTTTCTCGTTTTTCTTGGTGGGAAACTGGGTTATCACTA
GATCTTTACTTTTGGCAGCGAGCAAAAAAAACGATAATTAATGTTGCTAA
GAGATGTTTTAAAAGCTTGAGTGGAAAGCAGTCAAGTGAACGAAATGGAA
TTATCACCTTATATCCTAAAGGCTAAAAGCTGCAATTTTTATCTGTTAAA
TATTATCTTGACGGACTTAGACACTGAAGAAAATGTTAAACTTATCTCTA
ATTTAGATGGCCCACTTTTCGCCCTACCTATTCTAATTGTAAATTAAGGT
GATCTTAAAGTGTGCTTAAAGTGTGCTGTCTAAAGTCAATGCATTGCGCT
CTTTTGACGTCTATGCAATCAATGTCTTTCAAACTTTTTGGACCTACCCC
GGTGGGGTGGAGGTCCTATAAATTAACCTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTATTAGCTTTCCTCGTGATTGGCTCTTTGATTCTT
TATGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGG
AGCCCGACTTTCAAATAAATGGGCAAATTTGGGCCAAAAAACGGCTAAAA
ACGGGAATAATTGGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTGG
TATCATAGGTAAAACATGGCTCAAGTAGATTTTTTCAAAACAATTTTGTT
GGCTCAAAAAACGCATGTTTATCTATAAGAATTACTCTTAATAAGCATAC
GTCAATGTTCTTAGCCAAATTACTCAATTTTTTGATGAGATAGATGTTTT
TTTGCTCACAAAGTCTTGAATATTGAAAAATATTTCAAGAGCATGAAATT
TTCGTTTCTAAACGTTTTTTTTATAAGAAACAAACGACTAATTTTAATAG
ATCGTCACTGTATGTGTTCTGAATGATTGTTTAATGGTCACGCTCACGTA
GATATCAATTATATATGTGTTAAAAATGCATAACCAGGTAGGTCCATAAA
AGTATCACTTGTTTCAGCAAAGAATTTAACCGTCCACTTTGTGCCCGCTT
TGTGCCTACTCTTACAATTAGATTAGGCAGGGCGAAAGCTGAGCCGTCTA
AACTAGAGCTTATCTCCTTACCTGATGAATATGTAATAGAAAGCATCAAA
CAAGTCTCTATAATGGAGCACAGTCTTGTGGTACAGAACTGCTTGTAATC
CAATCAGGACTGCATTCAACAAGACCTCTATACCAACAACTTTTCGTTGG
AAACGTATGATTTTGGTACGTTTGAGAACATTGGATTCGAAAACCACAAT
TAGGTATTTGATGGATGCAGTGATGAGGCGTCCACTGAGCACCAGAGATG
CGGTTGTGATTGGGATCATAATGAGTGCGTATATTATGGTCAAACCCTTG
CCAATCATCGACTTTGCCACGTTTTCTCCGTAACCTGTAAAATAGATTGT
GAAACTTTCAAATTATTATTCTTCTGCGAATGATATTTTTCACTCTCACC
CGCGTGCAAGATTTTATTTTATTACATTAAAGGAAGAAGTTTTGGCGAGA
AGAAAATTTGGCGGATTTGGCCAAAATCCACCAAAATCTTTTTCCGCCTA
GTCGCCAACAAAAATCATAAAAAAAGAAATAAGTTTATACCTAAACTATT
TTCCGCCTAGTCGCCAACAAAAATCATAAAAAAAGAAATAAGTTTATACC
TAAACTATTTTCCGCCATCCGCCAAATTTAAATTGCTCTATTTATTTCCC
CGAATGTGTGCTATTTCGGGCTTTAAAACAGGTTTTTACTTTTTTAATTG
CGTTTTTTGGACAAAAATGTCCTTAATCCGCCAAATTAAATTCCCTCTGA
AAAAACTTTTTCGGTCCGCCAAAATTTATTCCTTTAATAATAGTCTATAC
AATGGCTACAAAATTTGCTTCACAATTTCCATTCAAAGAATGCAACCACT
CTTATCAGCGTCAATTCTTCAAATTTTTTCGTGCCTTAAAAAGTTCAAAT
CCAGCGACTTCTTCTATGATTTCATACGAGTACAATCATGGACAAAAGGT
TTGTAGACTTCTGCAATATTTGCAAAATACTTCAATATCGATCAAAAACA
AGTTCCCAGGAGGTTCTGGGTGCTTTCCAAATCCATCCAAAGCTGTTCAA
AGTCTTTCAAAGTCACCCACTGCAGTCTAACCACAAGGGCTTCATTAACT
GGCTTACACCAGTATCAAAACGCTGATTTTTTGCTTGTGGTTCCCTCAAA
AGCAATTCAAAAGCAATGCAACTTTCCTCTGGGTCGCACGTCCACCAACC
AGCCTACCGACTCTATAGAAGCTTCTCTATCATTGACTTTTATGAAAAAT
CTTAAAACGGTGTCCTAAAGAGTGTTATATAGACAAAATAAAAATTAGAA
AAGGGACAAAAATAATTTTTAACCAGCCAGCCTACCGGCTCTATAGAAGC
TTCTCTATTATTGATTTTTATGAAAAATCTTTAAAAAATCTTAAAACGGT
GTCCACAGAGGTCCACTCACTTACCAATGGTAAAAGCGACGCTCAAAGTG
AAATGAGACCACTTATAAAACATCCTGTAGTTGAATTGACAAGTAGGTTC
ATCATTGTCAGCAAAGTCATAAATATTTGTCTCCTTGTCTGAACACCATT
TTGTCATGTTTCGCAATATGTCTCCAACCATTGAGGTTTTGACCGCATCT
GTTAAGTTCAATTGTGTTAATCCCTGACATAGTTCTTCGTTAGTCTTGAT
GTTTGAGTTTGAAGAGTCATCGGTGTAAAAGTAACATTCCTCAATATAGA
AGAACATTAACGCACCAAGGACTAGACTGGAAAGAACGATAACGAAAAAT
ATCAGGAAACGTTTTAAAATTTTCTTGATTTCTTTGATCAGTTTCTTTTT
AGCTTGTGGTATGTTCTCGATAATCATGGTTTGAGCAAGCTCTAAGAAGA
GTTTTCATTAATTATTTTTTTAACAAGTGCATAGTTAAGTTAGAAAATCT
TCATTTTCTTTTCACCCTGAATCCTATAACCTCAGTAAGTCTTCTCCAGA
AATTTGACAGATGACCAAAAGCCAAAATCAATTATTCCCTTAACTCGATC
GATCAATTATTGATAAGGTCAATATAAAATCTATTTTATCATTATTAAAA
GATTCAATAACAGAAGCTGCTTTTGGTCCATTTTGAAATTTAATTTCGAA
ACGTTTCGGCCTCAACAGAGTACCATTTTCAGTAAAAAAATTGTTTATAA
TTACAATTATGATGGTACTCTGTTGAGGGCGAAATGTTTCGAAAATAAAT
TTCAAAATGAACCAAAAGCAGCTTCTGTTATTGAATCTTTTTTAAGGTCG
CTACCCACTCAGCATTTTATTGTCGTCGAACAAGGCGCAAATCTCGGGCG
CTTTGGTCGCTGAACGCTTTTCCTATTCCACTGATCCGCACATTTTTTAT
TTTTTCTATTGTTGATATCTTTTTGCACACGGTACAAGAAAGTTAAATGT
CTCTTCTGATTGGCTATTTAAAAAAGAACAATAGGGAAGCCGCACAGCCT
AGCGAAAAAAAGTTTAAAAGTTTCAACTCTTGGTACGCTCAAGGCGACAG
CCTTTGAAGGCTTGATTTATGTAATTTGTGCAATAATTAAGCTGCGCGCC
TTGTTCGACGACCATAAAATGCTGAGTGAATGTATAGAAGGATTTATTTA
TTTAATATTTTATTATTACTCTCTCAAAAAACCATGATATCTTTCGCCTT
CGATGGTTATTTTGGAATAAGCGATTTTCTTAATTATCTGTGAAAAATAC
TGCTTATTGTATTCATATTCTCTTCAACTATTTGGGAAACCCCTTTTTAG
AAACCTGTTTGTATTTTATATTTTTTATCATGATGAAAATTTTTCGACCT
GCAGCTGGTTTTTTCTATACATTAAGAATATTGCTCTTGATATAAAAAAA
CCATCTTGCCAATAAAAAAGTTTGTTGACATGAACTTTCTCTTATGAAAA
GTTAAATAAAGGGTATAAATTGTTACATGAACAACCCTTCCAATTAGGAA
AGTACTACCATCACCTAGAAGAAGGTAAATGGGCGAATCGTGTCAGCCGG
GAGGGGGATAAAATTCGATAGGTTATTTTCTAAGATAAATAATATACTTC
AGTTCAGCACTTCAGTTCGGTCATTGCAAGATCAAAATTTACCCCTACGT
TAAGACAAATTTTCATGGAGGAGCTAATGTAAAAATTTCCTCAGCTTCAG
CTCAAAATATAAAATTCTTTATATTTTCATAGAATCAATTTTATAAGAAC
AGCAGGAGGCTCAAAAAACAAGAACAACCGAGTGTCAAAAAGTTTACTAC
AAAAGTTCTTATAAAAAATAGTCTAAATTTCACCGGTGGGGGTACCTAGG
CAAAAGGAGGTTACGAGTATGTCCTTCAGGGTCTCTTTTGTGTCTTCAAA
TCTCACTAGGGGTCGTAAAAATAACATAATAATTCCAGTCCCCTTAAAAA
CAGGTTGTAAAAACAGCTCAAATTCCATATCGTGACCCTCAAAAGCCTAA
ATTTATATAAAATAGTCCCTCTAAGGGTCAACTTTGGTCCCTATAAGGGC
CAGAACGTCAAAAGTCGTCATCCCGCAAACCTAGTACTTCCCCAGCGAAA
TTTCACTTTTCATTTGTGTTTATTTCTTCAGATCGAAGTGAAAGGAGAAT
CAGCCGCCATGATTATGGATTGTTTGAACAGGTTGAAGAAAGCACACCAA
GAACTCAAAACCATCCTTGTAAGTACACCTCCTCTGTTTTCATTGTTGCT
AACGCGTTGACGAAGTCTGCTGTACACACGTATTTTTAAAAGAACAAACT
ATATAAGAACATAAAGGCTTTAATGACCAAAATGTCAAGAACAAGTTAAG
AACATTTTAAAACTTTGTAGACTGTTAAACACCGGAATCCTTAGGATTGA
TTTTTTTACATTATTTCCTTGATCTCCAAAAATATTGGTTCTTCTTACAA
GAAAAGTGTTAATATAATGTATACGCTGTGTGTACCTTAGTTAGAACTCT
TTTTTTACATTATTTCTAATCGTATGCTTGATTGTAATAAATGTTACCGG
TTTTGAAACTCCCAGTCATATTATTTGTGTCAGTCTTATTTGTTTCCTGC
TCAATAAGACCTTCCTCTACTGCATCTTGGTTGACGGAATCGTCTCGTAA
TTTTCTATCTCGAACTTTCATCTCTTCCAAGAGTTGCAACCTTATGGTCC
ATTTAATTTTCTCTACTTTTGCTTCTTTTAAAAATCGTTCTGGCAGAAAC
GGCGCATCAAAGATAGCTTTGTTCAGTTCTTCCCATAGCTCCTCGTAAAC
GTGTAAATTCTTACAACGTGCCATTCTCAACATTAATAATTGGAATTCTC
TGGACTGTTGCAAGTGTTCGTGCCATTGATTGGCTGGTGATAAAAAAGCC
TCGATGGAGGACATCAAAGCTGCCAGTGCTGCTACAGCTGAAACAATCAT
TTGGTCCAGCGAATGAATCAATGTTAAAAATGTTGTAATTGCCGTTAAAG
TGACTATAACGATCTGCAATGTCTTTTCTAAGCGGTTCCAGTGCTGAGCT
GCTCTCAGATGAGCTTTGCTCTTTGTAGATGTTTTACGAATGAACTCCTC
CCAATTCTCTTTACCCATAGTTCTTGCTTGGTAGTCGAATTTATTTATCT
CAATATTTACTGTTCACTGTCTGTTTTTAAAATCCTTTAAACGGGTTAAT
CAGATGGTTCTAGATTTTCCTATCTACTAAAAATTTGTTACTTAGGAAAT
ATTCCAAAATCCTTTTGCCTAATTAATTCCGAAATCGAAATGATATGACC
ATTTGAAATCTATTAAATTGAACTCTAACATGGTCGTTACGTTGAAATCA
TCTTCCCACTGAAAGTTTGTAACATCCAATATTATGCAATATGTATTTGG
CTTAAAAAAAGTTAGGTTGAAAGCTATGAAATTTTCCTCAGACAGTAAAA
GGAATCTGAAATCTCAAACCATCTCAACCATCTGAAATCAAGCCGAAAAT
CTTAACCATCTGATTATCTTCATTCATTTCAGAACAAGTTTCTACTTTCT
TGTTTGTTGTTGTTGTTTTTCACTCATAAATATTATTCAGCATGATTTCA
ATCAGTTAACTTTTACCGATGTACTTTCAAAATGAAAATGTTTTGAAACA
ACAATAGTATTGAAAGGCGCTGTCTTATCAGAAATGGTAAAATTGTAAAA
TGGGATTTTCCAGTAAAATCCGTCGGTGGGAGGTGGAGGATATATTATCC
AGGGTTATTGAGAAAAATACTCCTGATAATTGGATTTGATATAGATTACC
CGTCTGCTTTCATGGGATGTGATGCCGTGCGGGATAGATCTTCCCATGCC
ACAAAAACCTCGGACAGTATTATAGTAGTGAAAATTCGTGAAAAACCGTC
TCACTGTTTCATTACCGAGTTTATGTATCGGGGGATATCGAGGGCGACGG
TAAGTGAAATCGATACAAAACAAAGTCGATAGTTGATGTACGGCTCTATA
TCGCCTTTGCTCATCTAAACAAACGACGGTATTTTGGTTTTTTTACCGTC
GTCGAGAAAAGTGGACGGCGATTTCAGCTCCATGTCAACTTTGCTTTATA
CCGTCCCCCTCGATTTATCTCGAATACATAAACTCGCTATTAGCTAAAAG
CATAGATTTATTGCTAAAAGTAAGGACACAGTCACGGTATAGATGATTTT
TCCGTTCGAGGTCGAATAGACATTTTCATAAATTACGTCATAAACATCAC
TTGCCTCGTTTTGAAATTATTGCCATGATGTTAATTCCCAGTGGATTTTA
TTAAAACTACTTCCTATTCATAAAAAAATCATGTCTCAAGAGACATAATT
AGTACTAGTAATCGTATGGTTTGGAGTGCAATTAACGATTAATCACGAGT
AACAAAGGAGAAAATAGTAATTTGCACGAGTCCGAAGGACGAGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCGCCGAAGAGTGCAA
AAAGTGGTAATAGTGCAATTAACGATTAATCGCACTCCTCTAAACCAATC
AGATTCGAGTAATTTTGCACGGCTGACGATTACGATGGTAATTATTTGAA
TAAGAGGCAAGCGATGTTCGTGAGGTGATTTATGAAATGGTTTATTCAAT
TCATTTATGTACTGTATAAACTTGCCTTTGTACTGTGTTAAATTCTTTTC
TTTTTTTCACAGGACAACGATACAGATTACGCAGAGAGCGAAGAATATAA
AGCAGCTCAAGATATTTACAGCGATGCCTCCTCTGTTATCTCCGCCTAAG
AATGCCATCGAAAAACTAAATCTTGCTGACAAAGCAATTTTTAACGATTC
TTAAAACACTAAAGACCTTGTTGGACTGTTAAATAAAAAGTTGATTGGGA
TAAGGATGGTTGTTATGAAGATCGCCAGCTTAACTGTCTCGTGATATTCA
AGAATAACTGACACTAATGCTATCCTGATTTTCAAGCGGGAATTTTCAAC
AATCTTGAATTCGAGATGATGTTTTTCGAAATTAGACATTTTAAATTTTT
GTTCGGTATAATGATACTTTACTGGGATAAACTTTCACGGGGATTAAATT
TCGCGGATGAGGAGTTCCCTGATTTTTCGCGTAATTTCGCGGATCAGGAT
TAAGTCAAATTTTTCTAAAGTGATTCCAAATTTGCAAACGGGGTAGCGAA
CAGAATTTCTCATAAATTCAAAATTTTGATATGGTAGAGTGCGAAAATTC
GAAAAATAACGAAGTCATTTTCTTCAAAGTTTAAGTAGTCTGATTTGCGG
GACGAAAAAACAACGATAGAAATTTACAATTTTTGCGGATCGAAGAAAGA
TTTCAATTTTTTTTGCGGGTAGTTAATTTCGCGGATGAGGTCCTTCCAAA
TTTCCATTGAGACTTAATTTCGTGGATTTTCGTGGATGACACCCAAATCC
GCGAAATTTCATCCCCTTGAAAGTTTATCCCATTAAAGTAAATATTGATA
ATTTATATACATTGTAGTAATTTTTATTTACGTAGTTTCACTTACATGTA
CATTCGAAAATTCTAGAAAAAAAAAATACTAAAACTATTTTATCAAGATA
CGAAATGCTTTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009008XLOC_009008Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016118-exon-sc0000226-1575043694:66432..66502TCONS_00016118-exon-sc0000226-1575043694:66432..66502Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1575043694:65834..65862TCONS_00016118-exon-sc0000226-1575043694:65834..65862Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1575043694:64544..64649TCONS_00016118-exon-sc0000226-1575043694:64544..64649Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1575043694:57835..57921TCONS_00016118-exon-sc0000226-1575043694:57835..57921Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1575043694:54039..54940TCONS_00016118-exon-sc0000226-1575043694:54039..54940Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1510915933:66432..66502TCONS_00016118-exon-sc0000226-1510915933:66432..66502Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1510915933:65834..65862TCONS_00016118-exon-sc0000226-1510915933:65834..65862Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1510915933:64544..64649TCONS_00016118-exon-sc0000226-1510915933:64544..64649Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1510915933:57835..57921TCONS_00016118-exon-sc0000226-1510915933:57835..57921Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1510915933:54039..54940TCONS_00016118-exon-sc0000226-1510915933:54039..54940Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1491911889:66432..66502TCONS_00016118-exon-sc0000226-1491911889:66432..66502Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1491911889:65834..65862TCONS_00016118-exon-sc0000226-1491911889:65834..65862Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1491911889:64544..64649TCONS_00016118-exon-sc0000226-1491911889:64544..64649Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1491911889:57835..57921TCONS_00016118-exon-sc0000226-1491911889:57835..57921Clytia hemisphaericaexon
TCONS_00016118-exon-sc0000226-1491911889:54039..54940TCONS_00016118-exon-sc0000226-1491911889:54039..54940Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000226supercontigsc0000226:54039..66502 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.3546	62.8089	101.821	69.4508	36.2188	30.2934	19.3417	19.8	17.7146	16.1955	21.7254	19.3307	15.5238	12.5678	9.24292	17.3971	12.7962	12.0106	10.103	18.8035	1.49652	5.55916	12.9673	7.69427	35.0111	35.1403	3.41055	8.40826	11.4835	14.6359
Blast
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BLAST of TCONS_00016118 vs. Swiss-Prot (Human)
Match: TBCA (Tubulin-specific chaperone A OS=Homo sapiens GN=TBCA PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 5.414e-28
Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 3 
Query:   54 DPKLRNITIKTGVVKRLAKEKTMYEKETAQQEAKIEKMKADGKDEYDIKKMIEVKGESAAMIMDCLNRLKKAHQELKTILDNDTDYAESEEYKAAQ 341
            DP++R I IKTGVVKRL KEK MYEKE  QQE KIEKM+A+  + YDIKK  E+  ES  MI DC  RL+ A+ +L+ IL+N+ D  E+EEYK A+
Sbjct:    3 DPRVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEAR 98
The following BLAST results are available for this feature:
BLAST of TCONS_00016118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCA5.414e-2858.33Tubulin-specific chaperone A OS=Homo sapiens GN=TB... [more]
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