|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016414 ID=TCONS_00016414|Name=TCONS_00016414|organism=Clytia hemisphaerica|type=transcript|length=5157bp cgctcataaaatgctgttatctgaaaaatatatgtgtgatttgaagtgcg atatctcacgaatgaaaagtgcatgaaggttgcctgatacaaNAAGATTT TCATTTACAACTTTCCAAGATATATTTGAAGATGACTGAACGTATCTCCA AGGACCGTTTCACATACGACCCTTATACACGTCTCACGTATGGTTACCTT GAATATTGTTTATGGAAAGAACAAAAAGATGATTGGGAAAGACTGAAGTC GGGGAATAATGGAGCGAATAGTCAAGGCAACGAGGCTAAGAATTGTTGGT CAAATTTtgaagacgaagaagaaaaagaagaagttcTAGAGACAGATACG TCAGATCCAGTCGAACTGGTGTATCACGCGGACCGCGCGCTCAGACATTG GAACAATATCGTGGAGAACACTGGTACATGGGATTTATTGCTACCCAAAT ACATGGAGATTTTTTCCTCTTATAACATTGACAAAGAGGTCTGGAAACTA CTTGAATTGCATGCTGGGAATAATTCGGACAATTATTTGTCGTACGTGTA TCTGATCCTTTGGAACAACACTACAGGAGCAAATGAAATGGAAGACATGC TTCACGTCTATGAAAAACTAGCATCCTTAAATCCGTCTAACGCCTTGTTG CAAAGCTATATGGGTTATTTGAGAAAGTCGAAACATTTTGGTGCATTACT AGACTTGTTGGTCAGGCGTTTATCATACACGGAGTGCTCTCGAAGTTTTT TCGATTGGGATCTGCTGGCTTGTTTGCTGCAAGACAATCAACAGTTGGGT CCACTCTTCCAGGGAAAACTCAGaGCGAAGAGGTATTGGTTTGACTTACA CTACCAAAATAATCAACTTGCATCGCAAGAAGGGTCCAAAGaacatgaag aagttgaagccttgaaaatgaaagtagcAAAAATCGCCGACCTATGCACT TTATTTGCACCACAAGATGATGAAGAAGGAACACTCCCTAACAATCAAAT AGAACATACAATACAACTACCTTCTTTTAATGACGAGGATGATGAACAGC TCTCAACCTCTGCTTTGTCAGATACTGACAATGAGGATGAACTGGACTTT GATGTCGATGATGAGCTCCAGTTTGATTTCTTTCTCCAATCTGATTGTGA AGAAAACATCGATGTTGAACCTAACAGAGATAATGCAAATTGTGACGCTG AAAATTACGGAGTTGATCAATCTATAGGAATATCGAATGGTGGAGATAAA AGAGCTGATGGAATTGAATCTAGTGGAGATAACTCATTGTCTCAAAATAG GAATGGAACTAGTGTCGAAAGCAATAAAACGATGAAAGTTGTCACTATCC CAGTTGCATCTATTCCGAAACCCCGATCCCAATCCGAATTGGATGAACTG ATGAAATCGGAACGTCAACAATATATGGATTTCGCTGAATGGCTAGAAGA AGAACGGTTGCTACATGCTCAAAGAGACTTGCCTCTTCAATGGAGAGGAA TCCATCGAAGGCTTAACGTTGCCTGGTCGGGACACGAATTACCATGATAT TGAACCCAGTGACAGGCGCAAATCACCCGAACGGATAAATCACTTTAAGA ACGATGCAAATTTTGATGAGACGACAAAAAGACGCGAGTTTAGCTTGACT GGATCCATAAATGTTAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACAC GGAGGAGAGCAATCATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATG CCGCTCTCCCCAACTCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACA GATTCGATTGAGAATCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGA GAGTTACGTAAAACGAAGACGACGTCTAGTGTTTGAATCAGATACAGATG AAAGCTCTACGCGGGAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTA TTCTCACCGTCAACGTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTT ATTTGACAAAGACGAAATTATAacttcaacacaaaaagacgaAAAACAAC CGAAATATGATTTCGAAAATCATGATAATAAAACTACGTTTCATCTTATC CATCAGAAGTATGAGACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCG CACAGAAAACCGTGAACAAATTTCAGAGCTACCTACACTTGTACAGGTAA ACAAAGGACTGTACCATTGTGAACCTTATCACAGAAATGACTTTGTTAAA GCTATCAAGAATCAACAGAGAACGAAAACTCGACATAAACTTATTGTACA TACTATGAAACCAGATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGG CTGAAAACATTATTCAACGCTATTTTCGGAATTTGAAAAACGAAATTACG GAACGAAGATCTGGCGAGAGCTCAAATGAAATTCTACCATATTTAAGTAC AGATCTTGAACAGTCTATTGTTAGTCATACCTCGATAAGTATTGATGTCG AAAACACAGGTCAAAAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTG CGTGGTGATAATAAAGAATCAACATGTCTTAAGAAGCGATACTTGCAAGT TAAACGCCGAAACCATACCAGGCCTATAACGCAAGGCTCAATCTTGTTAC GAAGGCAATTGAAAAAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAA GAAGAGGAACATAAGACTCAATCGATTTGGGAAAGGACTCGAaattcatt acgtaatgttaaaAATTTAATGGAAATTGCTAATGAAATTCGATCGTTTG ATAGGCGAAGCACCAAAGAATTGACATCGTTTCTAGAACTTCAACACCGA GAGGAATTAATTAGAGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTC TTTTCACGATATATCGAAtttatagtttgttttttttgcgtttttcatca attttttaacGAATTNTATCGAATttatagtttgttttttacgtttttca taaattttttaaCGAATTTCAGTCGACATAGAGTGGACTTTCATTCATTA TTATTCTTCAGGCGAATTCAGTGAATCCTTGAAGACAGTGAAACTTGGGG AAAACTAGGAAtgggcttttctagaaaaaaattgaatataaggGTTGGAG GAtacaacattttttggaaatttaccggacattgtgaattttgacccccc cggacaacggatctaaccccctggacaagcatcagttgacccccggacat tcaaaatcaacCCTAATCAGAGAATGTTTGCCcctaaaacaaggcaaatt ttgcagatttttcactacccggacaaaatatccaaaatatcCTCCAACGC CATGTACAaagattttctggaagagcccaatgaagATTATAAGGAAACTT ATACGAGCTAAAGTGATGACGCTAAAGCTTCAAACTTACACATGCAGTCT TCATAGTACGAGTTTCATTTCATTGAAGGTTGAAGTTGAGCGAGTGAACT TGTTTTTTAATGACCAGCAACTGAAATTCATTCCTTGcgtttttttcaga atttttgagttttgataaatttgttaaCGTTTTTTagaattatatttata tatggtttattattcttaaattttcaaaatgtttttttttgtatatcAGA TTAAAAGGATATAACCACTTGTAAGTGGGTCATTCAGGTAAAATGAGGTA CAGGGATGCGCCACTGTTATGTGCCAACTGTTCAGGGTCATTTTGTTAAT CTCTGAAAATACCGGACAGGATGGCAAATTTGTTGAATCTTGAAAGCTCG AAATACTTCTGATAGGGTCCAAATTGCATTTGACAGGTTTGATTTTCGCT TAAAATTGACAGGTTTGATGTTTTGAACTTCAATGGCCGTCAAAACCAGT ACCTCCTGAATCCATAGGATTTAGGATAGGATTTGGTTTGAGTTTGTCAA GCCTATAACAAACACAGACACTCAGGATAATTTTATTCTCTGATGAACGC TTTTACACCCCCTGTGTCACAgctccggtggaactttttcccttggtagg gataaaaattcctattgaaaccCCGATTGGGATATAAATTCTCTTGTTCC AAAATCCAGTTGGGATGGTATTGGAGTGCAATTCtttaacattgaatttt gagtggggatgaaatcaaagtcagttcccgagtggggctaaaattccagg gtattttcccactggggcgaaatttttgacaaattttccagtggggctgg ggtcccattGGGTCTATGACACACGGgtgtacacccctgtgtcacagacc cggtggaaatagaccttatcggagtttttaattttttcaaaaaagcgatg cattgtgggattgtttcgagtgtattacaatagaattccctagaggaatt cctaagagatttctattgtaatacactcgaaactatcccacaatgcatcg cttttttagaaaaattaaaaactccgataaggtctattgaatcagattga atttgttttcatccccatttgaaattcaatgaaaaaaaaaacatctccac tggattttttgacttttgaacaataaaatttctatccatATTGGGATTTT GATAAACATTTTCATCCTCAACAAGGGAGAAAGTCCCAcggggtctgtga cacaggggtgttaaatgataaaatgataaaaattctcATTCTAACTGTGa gaagaagttccaccggggtcACGAGACTGGAGTGTCATATAGCTTTTTTG TCAAAGGATGCTGTATAGTATATAGTGTAATAAGAACAAAACGGGTTTTG CATTTATAACTGAACTTACTATAGAGGGATTGATGTTGGCAACCTATTCA GACACAACAGTATTTTCTATGAAAATGTCAGCGGTTGGTATTTTTAAGAA TtagtgttttttgaaaattatttttagaatttatcaATAATAATCAGCCA GACGGTAATGTAAATAATTTAAAACGATATATCTATAGAGAGATTTGCTT GCttgctataatttttgaaaatgtctttCTTAGAAAAGAATCGTTTTTGA AACGTTGACTCATTTAACTTTGTACTAATGTTTAGCTTATGTAACCACGG TTATACTTCATTCAAGTCAAGAGTCTGATTTTGCAATATCTTCTTAACAA GACCTCA Run BLAST on NCBI protein sequence of TCONS_00016414-protein >TCONS_00016414-protein ID=TCONS_00016414-protein|Name=TCONS_00016414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp
MLKETCLFNGEESIEGLTLPGRDTNYHDIEPSDRRKSPERINHFKNDANF DETTKRREFSLTGSINVNEQFHLSFSSDTEESNHEVMFKRESKSDAALPN SLLNLHGEVVGTDSIENLANLGSKTVREESYVKRRRRLVFESDTDESSTR ESVVQDSEDECLFSPSTLESGKRHHLHSLFDKDEIITSTQKDEKQPKYDF ENHDNKTTFHLIHQKYETGDLAPLLPFNRTENREQISELPTLVQVNKGLY HCEPYHRNDFVKAIKNQQRTKTRHKLIVHTMKPDWKARRRKRTQMAENII QRYFRNLKNEITERRSGESSNEILPYLSTDLEQSIVSHTSISIDVENTGQ KSLKRKKCTKPLRGDNKESTCLKKRYLQVKRRNHTRPITQGSILLRRQLK KRREKLAMRKKKEEEHKTQSIWERTRNSLRNVKNLMEIANEIRSFDRRST KELTSFLELQHREELIRVRKSFDAPKGFSFHDISNL Run BLAST on NCBI transcript from alignment at sc0000237:190727..201276+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016414 ID=TCONS_00016414|Name=TCONS_00016414|organism=Clytia hemisphaerica|type=transcript|length=10550bp|location=Sequence derived from alignment at sc0000237:190727..201276+ (Clytia hemisphaerica) cgctcataaaatgctgttatctgaaaaatatatgtgtgatttgaagtgcg
atatctcacgaatgaaaagtgcatgaaggttgcctgatacaaNAAGATTT
TCATTTACAACTTTCCAAGATATATTTGAAGATGACTGAACGTATCTCCA
AGGACCGTTTCACATACGACCCTTATACACGTCTCACGTATGGTTACCTT
GAATATTGTTTATGGAAAGAACAAAAAGATGATTGGGAAAGACTGAAGTC
GGGGAATAATGGAGCGAATAGTCAAGGCAACGAGGCTAAGAATTGTTGGT
CAAATTTtgaagacgaagaagaaaaagaagaagttcTAGAGACAGGTATG
GATTGGTTACcgtattacacgaatattactaggcaagtattcaacggcct
tgaaatttgaacGATCTGAAATTAGCActaatttttctgctttttcaagg
aaacagcggctggttttaattaacgcggtttttattaacacgaaattttt
caattcgtgttaataaaatgactagtaatgttcgtgtaataaggtaatta
ATTTCATCTATTCATTAGGAAAATTTTTATCATAATGTGTTCATATACTT
AAAAGATTCAAACCCCTTTACTGAGTTTTGTAGTTGTGAAAGTCTCCATT
GTGCGTGATTCTTGGTACTCTGTatcagagtgtatctcacgtttatcgtt
tcgtagtacatgtgcgcattgtctgtttgatgaagaatttcccgtacgga
gacctctgcgatgaagtatgatttataaatagcaacacttctcttatCAT
CTctcctctctcaccaacactccatcgcagcggtcggttttaaaaatctc
aaatgagaaaagacaatgacattTGAGACAACAGACCTTCTACGGCAATG
AGTTTTGAAAATAGCTGTAGGTCTGTATACAGATAAGATTCTTGGATGTA
TGAGACGTATTCAATCGTATGAAATTGGTAGATTTTTCCGTGCTGTATAG
ATTCCTAAAAACTTGTAAATACAGAATGGTGATCTTAAATAGGTTGGTTA
CTTTCTTTGCACCTACAGATACGTCAGATCCAGTCGAACTGGTGTATCAC
GCGGACCGCGCGCTCAGACATTGGAACAATATCGTGGAGAACACTGGTAC
ATGGGATTTATTGCTACCCAAATACATGGAGATTTTTTCCTCTTATAACA
TTGACAAAGAGGTCTGGAAACTACTTGAATTGCATGCTGGGAATAATTCG
GACAATTATTTGTCGTACGTGTAAGTCAATTACCATTTGTTTGTAATAGT
AATGATATGACATTGAGGGAAATTAGGGATTAATACCCcgagtttcattt
tgaaatagtttgAAATAGCACGAACGAAGTGAGGGCTATTTCAAACTATT
TCACAATGATATGAGGGGTATTAATCCTAATTTCACGAAATGTCATATCA
TTCCTGGttaattatatgactgattttattattttttaaagagctATCCG
AAATGGGGATTCCAGAAGTGAGACAGAAAATTTATGATGTTTTGCTATAA
AAATATGATGTATTGCTTCAAAACACAAATCACTTTCAAATTGTTGCAGA
TATTtcataaatataatatcaaacaacaaaaccaataATCCAAAATAATC
CATAATACAACAATATTATTGGGAAGAAGATTCTTCCAAATTGTTTTTTC
GGCTCCTTTGCAAAGACACCTGCATTATTATCAGCGAGTCAGGTTCATAA
TCAGTGTCATTATTCTTTCTTTCGTATCTCCACACAAAATGTTCACAAAT
GAAGTGTTCAAATTAGCTATCCTATATGATGGTTCGTATATTCTTTCGGA
TATGTCCAATGTTCTCCCGTTCTCCTCAAGCCCACGAAACTCCGCCCATT
TCTGAAAAGCATTTATCCAAATGTTCgcgtttttgtttttagaattttgc
caTAATAAAAGAACAACATCATCCAATAGCTTGAATTTGTCGTcttcttt
gtaaatttttcttgTACTTTTCCTCCTTTGACCAGACAGCTACTCAAAAT
ATTTGTATCGAataatgtttactttttttgtgATCGAATGTTGCCAAAaa
taatcgaatgttttgaaaattcgaaCGTACGTGGCGCGTGAAATTACGTT
AGGAGAAAATggttttgatcaaaaatatttaggCGGGAGCGGGGTATTAC
AAATCAAGCGGGGTATTACGAAATAATACCCCGCCGAAGGATAAGGGCAT
GCAACCTAAATAAAACCAGTCATATAATTACAAGTTTGAATagagatttt
taagaaaattaaaagctttaaactAAAGGAATTGCGACTACAGGCAGCAC
AATGATACCTTTCCTCTTGTCAGTTGATGAGAGTTTTGAGtgtaatattt
atttattaattttctcaaaatctcatttaaatagaccttttcataagtta
cgtcacgaacatcacttgcctcgtattcaaacaattaccatggtgataaT
GTCccttaagacatttttttttataaatataaagtagttttaataaaatc
cgctgagAGTTAATCACCTGGTAatagtttcaaaacgaggcaagtgatgt
tcgtgacgtaatttatgaaaaggtctattgttacATATTTCTAAATTCCT
GATTTGCTTTATTTAAATATACTTCCAAATATGGACATTGGAAATGCATC
CATTAGCAAGAATAATTCCTTTCTAAAGAACTAGTCCTTTTTTGCAATAG
ATATCATTTCCAATATGTTTCGGCCTATACTGTCCTCAAGGACCAAAAAT
AGGTGTGAACATTTCCTACTttcgaaaatttcgaaattcctAATATGGCG
AAACTGGCTTTTTGGATATCTTCACCTTAATCTCTTGGGTATACTTTGGT
TTTCTACGAAGCTGCACATACACTCAAACTAACCCAAGAATTTATAAGCG
CTCTCAGGAACGTATCCCTCCCTCACTGAACAAGATTCAAGCTAGACTAG
GTACCTCTCTCTCTTTCAGGTATCTGATCCTTTGGAACAACACTACAGGA
GCAAATGAAATGGAAGACATGCTTCACGTCTATGAAAAACTAGCATCCTT
AAATCCGTCTAACGCCTTGTTGCAAAGCTATATGGGTTATTTGAGAAAGT
CGAGTAAGCAAATCTGTttttgaatacacgtttttttataagaacaaact
gtataagaacgtaaggcttcgatggccaaaatgttaagaacatttcaagg
ctttatggaccctaaaacacccaatttcttaggaaaatggacgaaaatac
ccaaaaatggtgaaaaccaaaacatgttaagaacatttaagcttaaaaat
aaaaaagttaaaggttttgttttaaataagagtgatatcgtttgcttact
catcaattttgattcacCAGCTTTTTAACATCGTACGGATGTGGagtaag
attggtcagaaagaggaaaagaaaaacagttttttgcttatatcagcata
atataacaaaagggagacactgtcctggtatgaaatatgtgtctgatatg
aaacaggaacacttatttaagaataaaacctttaagaataGAAGACTTCA
AAGatcttggatgttcttatgaaaaatgtgtAAACATGTTCATGAATATT
CTATACAATTAACAATATCTCAACATGCTTTGTCAGgcataaataaaaaa
gtataaagcGCCTCCCTTTCTCTCCGCAGAACATTTTGGTGCATTACTAG
ACTTGTTGGTCAGGCGTTTATCATACACGGAGTGCTCTCGAAGTTTTTTC
GATTGGGATCTGCTGGCTTGTTTGCTGCAAGACAATCAACAGTTGGGTCC
ACTCTTCCAGGGAAAACTCAGGTACGTTGACATTCATACCACAATCTCCA
CCGACGCTTCTACTAACTTTCAAAGATTCCTCCAACCTTCAAATATTCTT
CTAACCTTCAGGGCTCGAAGTagcggtcggacatcggacattgtccgacc
caatttGCAACCCCTgtcggacattttgtccgacccagttgaaatcgtta
tttcgagccatGAACCTTAACAGATTTTTCCAACTTTGAAAGATTCTTCG
AACCTATCACGGACGGAAAAATTTGTATCTCTGCCACCTTAAAAAAGTGG
AAAGTAGCATTTCcaagtttggaatttttttcagagACAAATGATAGATA
AACAGTTAATATAAAGTTTCTATTGACCGCTAGGTGTATAAGAAATTATC
TTCTTCTTATTGTAAATGTGGGATCTAGACTGATCTAGAATCTTCGTCTT
CGCAACGAAAACAAAAGTGTCATTTGCCGCCTTTGGAAGCCACATCAATC
CTAGTCTCAATCACAGAACTTGACAAAACCGCCGGTAGCATAGACAAAAG
AAATTTAGCTTATCAAGCATCCTTTGttaggagcacgaatccgttagtgg
gtGTCTGCAGCCTAACGTAACACTGCCATACCAATGTAGTTATTTAACGG
TCCAAGTTATCATGCTCAACAAAATCTTTGATACCCAACAGTCCTTACAA
CGTACACAGTAAACTTTGAGAATTAGTTAAAATTATAGAAATGCTTGGAT
AATAGAGGTTTCAATTAGCAAGAGTCAACTATCATGAAATGGTTCAGTGA
TAATACTGTATATCTTAAAGGTATTTGGCAATAAAGTAAATATCCAATAA
TAAGAAAGCAAGGCAATTTGCGTTATGAATTGAGCTATGGAAGGTATAAA
ATGGTTTTAATCTGTAACGTACGTGTGAACAGGGTCTAAATTGATTCCAt
gatttttcattatttcagaGCGAAGAGGTATTGGTTTGACTTACACTACC
AAAATAATCAACTTGCATCGCAAGAAGGGTCCAAAGaacatgaagaagtt
gaagccttgaaaatgaaagtagcAAAAATCGCCGACCTATGTGAGTTACT
ATTCCGAGTAAAATCCACTGAATCCTACACACTTTATAAGAAATATCAGA
TTTGTAGCATAGGTTTTGCACTCACTTTGTGGTAAAATTGAGATCCTATT
TTTTTGTTCTCCGCTAGATGAGACAGTGACACTATAGTCTCTATTAGGAA
GAAATGTGTTTGTTGTTGGTGGTTTTTAGATCTCCCTAACGTCTACCTTA
AGAGGacttattttggtattttgcctaactaacttcttgagttcacaaaa
aagcttcaaataaggcaaaatagaacagatttacgctgtcatttgccaaa
attagttcccgccaaaattaaaaagattaatCAATCGCAaaaagttctcg
ccaaaattaaaaattctcaGGATTTTTGCcactcgtcaaaattagttccc
gccaaaataagttcccttatgGTATTTTAGAATCTGCaagatttttcttt
gaatttaaacttttgaCTCTTTTGAAATTCTGTTCCGGAATTCAAAAAAG
TGTCGGAAAgtcatttttatttaattacaAGAGATACTTTCGAGATTGGT
AATCTTCCATACNAAATCCACTGAATCcactttataaaaaatatcagatT
TGTAGCATAGGTTTTGCACTCACTTGGTGGTAAAATTGAGATCCTATTTT
TTTGTTCTCCGCTAGATGAGACAGTGACACTATAGTCTCTATTAGGAAGA
AATGTGTTTGTTGTTGGTGGTTTTTTGATCTCCCTAACGTCTACCTTAAG
AGGacttattttggtattttgcctaactaacttcttgagttcacaaaaaa
gcttcaaataagacaaaatagaacagatttacgctgtcatttgccaaaat
tagttcccgccaaaattaaaaagattaatcaatcacaaaaagttctcgcc
aaaattaaaaattctcaGGATTTTTGCcactcgtcaaaattagttccctt
atgGTATTTTAGAATCTGCaagatttttctttgaatttaaacttttgaCT
CTTTTGAAATTCTGTTCCGGAATTCAAAAAAGTGTCGGAAAgtcattttt
atttaattacaAGAGATACTTTCGAGATTGGTAATCTTCCATACCCTCTT
TTCTCTGTAGGCACTTTATTTGCACCACAAGATGATGAAGAAGGAACACT
CCCTAACAATCAAATAGAACATACAATACAACTACCTTCTTTTAATGACG
AGGATGATGAACAGCTCTCAACCTCTGCTTTGTCAGATACTGACAATGAG
GATGAACTGGACTTTGATGTCGATGATGAGCTCCAGTTTGATTTCTTTCT
CCAATCTGATTGTGAAGAAAACATCGATGTTGAACCTAACAGAGATAATG
CAAATTGTGACGCTGAAAATTACGGAGTTGATCAATCTATAGGAATATCG
AATGGTGGAGATAAAAGAGCTGATGGAATTGAATCTAGTGGAGATAACTC
ATTGTCTCAAAATAGGAATGGAACTAGTGTCGAAAGCAATAAAACGATGA
AAGTTGTCACTATCCCAGTTGCATCTATTCCGAAACCCCGATCCCAATCC
GAATTGGATGAACTGATGAAATCGGAACGTCAACAATATATGGATTTCGC
TGAATGGCTAGAAGAAGAACGGTTGCTACATGCTCAAAGAGACTTGCCTG
TAAGTGTTCTTTTGAACGGAATTGAATATCGGTGTGAAAAGATTGAAAGG
GAAGAATTTTTCACTCATGTATCAAAAAATGACAATTCTCTTCGTGATCA
GGAGGATGGATACGATGAGAATCTCCAGTTATTTAAAGACGAAGACTTTG
TAACGATCCCAAAACCCGATCGGGAATCGGGTTACCATGGACGCAAGTTT
ATTGAAGAACCATTACCCGATTGGGACTTAAAATCAAATAGACACTGCTC
GTTACCACAACCCGATCTGAACTTTAGCTTCAATGGAGAGGAATCCATCG
AAGGCTTAACGTTGCCTGGTCGGGACACGAATTACCATGATATTGAACCC
AGTGACAGGCGCAAATCACCCGAACGGATAAATCACTTTAAGAACGATGC
AAATTTTGATGAGACGACAAAAAGACGCGAGTTTAGCTTGACTGGATCCA
TAAATGTTAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACACGGAGGAG
AGCAATCATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATGCCGCTCT
CCCCAACTCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACAGATTCGA
TTGAGAATCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGAGAGTTAC
GTAAAACGAAGACGACGTCTAGTGTTTGAATCAGATACAGATGAAAGCTC
TACGCGGGAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTATTCTCAC
CGTCAACGTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTTATTTGAC
AAAGACGAAATTATAacttcaacacaaaaagacgaAAAACAACCGAAATA
TGATTTCGAAAATCATGATAATAAAACTACGTTTCATCTTATCCATCAGA
AGTATGAGACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCGCACAGAA
AACCGTGAACAAATTTCAGAGCTACCTACACTTGTACAGGTAAACAAAGG
ACTGTACCATTGTGAACCTTATCACAGAAATGACTTTGTTAAAGCTATCA
AGAATCAACAGAGAACGAAAACTCGACATAAACTTATTGTACATACTATG
AAACCAGATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGGCTGAAAA
CATTATTCAACGCTATTTTCGGAATTTGAAAAACGAAATTACGGAACGAA
GATCTGGCGAGAGCTCAAATGAAATTCTACCATATTTAAGTACAGATCTT
GAACAGTCTATTGTTAGTCATACCTCGATAAGTATTGATGTCGAAAACAC
AGGTCAAAAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTGCGTGGTG
ATAATAAAGAATCAACATGTCTTAAGAAGCGATACTTGCAAGTTAAACGC
CGAAACCATACCAGGCCTATAACGCAAGGCTCAATCTTGTTACGAAGGCA
ATTGAAAAAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAAGAAGAGG
AACATAAGACTCAATCGATTTGGGAAAGGACTCGAaattcattacgtaat
gttaaaAATTTAATGGAAATTGCTAATGAAATTCGATCGTTTGATAGGCG
AAGCACCAAAGAATTGACATCGTTTCTAGAACTTCAACACCGAGAGGAAT
TAATTAGAGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTCTTTTCAC
GATATATCGAAtttatagtttgttttttttgcgtttttcatcaatttttt
aacGAATTNTATCGAATttatagtttgttttttacgtttttcataaattt
tttaaCGAATTTCAGTCGACATAGAGTGGACTTTCATTCATTATTATTCT
TCAGGCGAATTCAGTGAATCCTTGAAGACAGTGAAACTTGGGGAAAACTA
GGAAtgggcttttctagaaaaaaattgaatataaggGTTGGAGGAtacaa
cattttttggaaatttaccggacattgtgaattttgacccccccggacaa
cggatctaaccccctggacaagcatcagttgacccccggacattcaaaat
caacCCTAATCAGAGAATGTTTGCCcctaaaacaaggcaaattttgcaga
tttttcactacccggacaaaatatccaaaatatcCTCCAACGCCATGTAC
AaagattttctggaagagcccaatgaagATTATAAGGAAACTTATACGAG
CTAAAGTGATGACGCTAAAGCTTCAAACTTACACATGCAGTCTTCATAGT
ACGAGTTTCATTTCATTGAAGGTTGAAGTTGAGCGAGTGAACTTGTTTTT
TAATGACCAGCAACTGAAATTCATTCCTTGcgtttttttcagaatttttg
agttttgataaatttgttaaCGTTTTTTagaattatatttatatatggtt
tattattcttaaattttcaaaatgtttttttttgtatatcAGATTAAAAG
GATATAACCACTTGTAAGTGGGTCATTCAGGTAAAATGAGGTACAGGGAT
GCGCCACTGTTATGTGCCAACTGTTCAGGGTCATTTTGTTAATCTCTGAA
AATACCGGACAGGATGGCAAATTTGTTGAATCTTGAAAGCTCGAAATACT
TCTGATAGGGTCCAAATTGCATTTGACAGGTTTGATTTTCGCTTAAAATT
GACAGGTTTGATGTTTTGAACTTCAATGGCCGTCAAAACCAGTACCTCCT
GAATCCATAGGATTTAGGATAGGATTTGGTTTGAGTTTGTCAAGCCTATA
ACAAACACAGACACTCAGGATAATTTTATTCTCTGATGAACGCTTTTACA
CCCCCTGTGTCACAgctccggtggaactttttcccttggtagggataaaa
attcctattgaaaccCCGATTGGGATATAAATTCTCTTGTTCCAAAATCC
AGTTGGGATGGTATTGGAGTGCAATTCtttaacattgaattttgagtggg
gatgaaatcaaagtcagttcccgagtggggctaaaattccagggtatttt
cccactggggcgaaatttttgacaaattttccagtggggctggggtccca
ttGGGTCTATGACACACGGgtgtacacccctgtgtcacagacccggtgga
aatagaccttatcggagtttttaattttttcaaaaaagcgatgcattgtg
ggattgtttcgagtgtattacaatagaattccctagaggaattcctaaga
gatttctattgtaatacactcgaaactatcccacaatgcatcgctttttt
agaaaaattaaaaactccgataaggtctattgaatcagattgaatttgtt
ttcatccccatttgaaattcaatgaaaaaaaaaacatctccactggattt
tttgacttttgaacaataaaatttctatccatATTGGGATTTTGATAAAC
ATTTTCATCCTCAACAAGGGAGAAAGTCCCAcggggtctgtgacacaggg
gtgttaaatgataaaatgataaaaattctcATTCTAACTGTGagaagaag
ttccaccggggtcACGAGACTGGAGTGTCATATAGCTTTTTTGTCAAAGG
ATGCTGTATAGTATATAGTGTAATAAGAACAAAACGGGTTTTGCATTTAT
AACTGAACTTACTATAGAGGGATTGATGTTGGCAACCTATTCAGACACAA
CAGTATTTTCTATGAAAATGTCAGCGGTTGGTATTTTTAAGAATtagtgt
tttttgaaaattatttttagaatttatcaATAATAATCAGCCAGACGGTA
ATGTAAATAATTTAAAACGATATATCTATAGAGAGATTTGCTTGCttgct
ataatttttgaaaatgtctttCTTAGAAAAGAATCGTTTTTGAAACGTTG
ACTCATTTAACTTTGTACTAATGTTTAGCTTATGTAACCACGGTTATACT
TCATTCAAGTCAAGAGTCTGATTTTGCAATATCTTCTTAACAAGACCTCA
Coding sequence (CDS) from alignment at sc0000237:190727..201276+ >TCONS_00016414 ID=TCONS_00016414|Name=TCONS_00016414|organism=Clytia hemisphaerica|type=CDS|length=2922bp|location=Sequence derived from alignment at sc0000237:190727..201276+ (Clytia hemisphaerica) ATGCTCAAAGAGACTTGCCTCTTCAATGGAGAGGAATCCATCGAAGGCTT AACGTTGCCTGGTCGGGACACGAATTACCATGATATTGAACCCAGTGACA GGCGCAAATCACCCGAACGGATAAATCACTTTAAGAACGATGCAAATTTT GATGAGACGACAAAAAGACGCGAGTTTAGCTTGACTGGATCCATAAATGT TAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACACGGAGGAGAGCAATC ATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATGCCGCTCTCCCCAAC TCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACAGATTCGATTGAGAA TCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGAGAGTTACGTAAAAC GAAGACGACGTCTAGTGTTTGAATCAGATACAGATGAAAGCTCTACGCGG GAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTATTCTCACCGTCAAC GTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTTATTTGACAAAGACG AAATTATAacttcaacacaaaaagacgaAAAACAACCGAAATATGATTTC GAAAATCATGATAATAAAACTACGTTTCATCTTATCCATCAGAAGTATGA GACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCGCACAGAAAACCGTG AACAAATTTCAGAGCTACCTACACTTGTACAGGTAAACAAAGGACTGTAC CATTGTGAACCTTATCACAGAAATGACTTTGTTAAAGCTATCAAGAATCA ACAGAGAACGAAAACTCGACATAAACTTATTGTACATACTATGAAACCAG ATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGGCTGAAAACATTATT CAACGCTATTTTCGGAATTTGAAAAACGAAATTACGGAACGAAGATCTGG CGAGAGCTCAAATGAAATTCTACCATATTTAAGTACAGATCTTGAACAGT CTATTGTTAGTCATACCTCGATAAGTATTGATGTCGAAAACACAGGTCAA AAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTGCGTGGTGATAATAA AGAATCAACATGTCTTAAGAAGCGATACTTGCAAGTTAAACGCCGAAACC ATACCAGGCCTATAACGCAAGGCTCAATCTTGTTACGAAGGCAATTGAAA AAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAAGAAGAGGAACATAA GACTCAATCGATTTGGGAAAGGACTCGAaattcattacgtaatgttaaaA ATTTAATGGAAATTGCTAATGAAATTCGATCGTTTGATAGGCGAAGCACC AAAGAATTGACATCGTTTCTAGAACTTCAACACCGAGAGGAATTAATTAG AGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTCTTTTCACGATATAT CGAAtttatagATGCTCAAAGAGACTTGCCTCTTCAATGGAGAGGAATCC ATCGAAGGCTTAACGTTGCCTGGTCGGGACACGAATTACCATGATATTGA ACCCAGTGACAGGCGCAAATCACCCGAACGGATAAATCACTTTAAGAACG ATGCAAATTTTGATGAGACGACAAAAAGACGCGAGTTTAGCTTGACTGGA TCCATAAATGTTAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACACGGA GGAGAGCAATCATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATGCCG CTCTCCCCAACTCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACAGAT TCGATTGAGAATCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGAGAG TTACGTAAAACGAAGACGACGTCTAGTGTTTGAATCAGATACAGATGAAA GCTCTACGCGGGAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTATTC TCACCGTCAACGTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTTATT TGACAAAGACGAAATTATAacttcaacacaaaaagacgaAAAACAACCGA AATATGATTTCGAAAATCATGATAATAAAACTACGTTTCATCTTATCCAT CAGAAGTATGAGACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCGCAC AGAAAACCGTGAACAAATTTCAGAGCTACCTACACTTGTACAGGTAAACA AAGGACTGTACCATTGTGAACCTTATCACAGAAATGACTTTGTTAAAGCT ATCAAGAATCAACAGAGAACGAAAACTCGACATAAACTTATTGTACATAC TATGAAACCAGATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGGCTG AAAACATTATTCAACGCTATTTTCGGAATTTGAAAAACGAAATTACGGAA CGAAGATCTGGCGAGAGCTCAAATGAAATTCTACCATATTTAAGTACAGA TCTTGAACAGTCTATTGTTAGTCATACCTCGATAAGTATTGATGTCGAAA ACACAGGTCAAAAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTGCGT GGTGATAATAAAGAATCAACATGTCTTAAGAAGCGATACTTGCAAGTTAA ACGCCGAAACCATACCAGGCCTATAACGCAAGGCTCAATCTTGTTACGAA GGCAATTGAAAAAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAAGAA GAGGAACATAAGACTCAATCGATTTGGGAAAGGACTCGAaattcattacg taatgttaaaAATTTAATGGAAATTGCTAATGAAATTCGATCGTTTGATA GGCGAAGCACCAAAGAATTGACATCGTTTCTAGAACTTCAACACCGAGAG GAATTAATTAGAGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTCTTT TCACGATATATCGAAtttatag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00016414-exon-sc0000237-1491911889:190727..191071 | TCONS_00016414-exon-sc0000237-1491911889:190727..191071 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1510915933:190727..191071 | TCONS_00016414-exon-sc0000237-1510915933:190727..191071 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1575043694:190727..191071 | TCONS_00016414-exon-sc0000237-1575043694:190727..191071 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1491911889:191795..191996 | TCONS_00016414-exon-sc0000237-1491911889:191795..191996 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1510915933:191795..191996 | TCONS_00016414-exon-sc0000237-1510915933:191795..191996 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1575043694:191795..191996 | TCONS_00016414-exon-sc0000237-1575043694:191795..191996 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1491911889:193746..193879 | TCONS_00016414-exon-sc0000237-1491911889:193746..193879 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1510915933:193746..193879 | TCONS_00016414-exon-sc0000237-1510915933:193746..193879 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1575043694:193746..193879 | TCONS_00016414-exon-sc0000237-1575043694:193746..193879 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1491911889:194456..194597 | TCONS_00016414-exon-sc0000237-1491911889:194456..194597 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1510915933:194456..194597 | TCONS_00016414-exon-sc0000237-1510915933:194456..194597 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1575043694:194456..194597 | TCONS_00016414-exon-sc0000237-1575043694:194456..194597 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1491911889:195545..195666 | TCONS_00016414-exon-sc0000237-1491911889:195545..195666 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1510915933:195545..195666 | TCONS_00016414-exon-sc0000237-1510915933:195545..195666 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1575043694:195545..195666 | TCONS_00016414-exon-sc0000237-1575043694:195545..195666 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1491911889:196787..197325 | TCONS_00016414-exon-sc0000237-1491911889:196787..197325 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1510915933:196787..197325 | TCONS_00016414-exon-sc0000237-1510915933:196787..197325 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1575043694:196787..197325 | TCONS_00016414-exon-sc0000237-1575043694:196787..197325 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1491911889:197604..201276 | TCONS_00016414-exon-sc0000237-1491911889:197604..201276 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1510915933:197604..201276 | TCONS_00016414-exon-sc0000237-1510915933:197604..201276 | Clytia hemisphaerica | exon |
TCONS_00016414-exon-sc0000237-1575043694:197604..201276 | TCONS_00016414-exon-sc0000237-1575043694:197604..201276 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000237 | supercontig | sc0000237:190727..201276 + |
Blast
The following BLAST results are available for this feature:
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