TCONS_00016414 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016414
Unique NameTCONS_00016414
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016414 ID=TCONS_00016414|Name=TCONS_00016414|organism=Clytia hemisphaerica|type=transcript|length=5157bp
cgctcataaaatgctgttatctgaaaaatatatgtgtgatttgaagtgcg
atatctcacgaatgaaaagtgcatgaaggttgcctgatacaaNAAGATTT
TCATTTACAACTTTCCAAGATATATTTGAAGATGACTGAACGTATCTCCA
AGGACCGTTTCACATACGACCCTTATACACGTCTCACGTATGGTTACCTT
GAATATTGTTTATGGAAAGAACAAAAAGATGATTGGGAAAGACTGAAGTC
GGGGAATAATGGAGCGAATAGTCAAGGCAACGAGGCTAAGAATTGTTGGT
CAAATTTtgaagacgaagaagaaaaagaagaagttcTAGAGACAGATACG
TCAGATCCAGTCGAACTGGTGTATCACGCGGACCGCGCGCTCAGACATTG
GAACAATATCGTGGAGAACACTGGTACATGGGATTTATTGCTACCCAAAT
ACATGGAGATTTTTTCCTCTTATAACATTGACAAAGAGGTCTGGAAACTA
CTTGAATTGCATGCTGGGAATAATTCGGACAATTATTTGTCGTACGTGTA
TCTGATCCTTTGGAACAACACTACAGGAGCAAATGAAATGGAAGACATGC
TTCACGTCTATGAAAAACTAGCATCCTTAAATCCGTCTAACGCCTTGTTG
CAAAGCTATATGGGTTATTTGAGAAAGTCGAAACATTTTGGTGCATTACT
AGACTTGTTGGTCAGGCGTTTATCATACACGGAGTGCTCTCGAAGTTTTT
TCGATTGGGATCTGCTGGCTTGTTTGCTGCAAGACAATCAACAGTTGGGT
CCACTCTTCCAGGGAAAACTCAGaGCGAAGAGGTATTGGTTTGACTTACA
CTACCAAAATAATCAACTTGCATCGCAAGAAGGGTCCAAAGaacatgaag
aagttgaagccttgaaaatgaaagtagcAAAAATCGCCGACCTATGCACT
TTATTTGCACCACAAGATGATGAAGAAGGAACACTCCCTAACAATCAAAT
AGAACATACAATACAACTACCTTCTTTTAATGACGAGGATGATGAACAGC
TCTCAACCTCTGCTTTGTCAGATACTGACAATGAGGATGAACTGGACTTT
GATGTCGATGATGAGCTCCAGTTTGATTTCTTTCTCCAATCTGATTGTGA
AGAAAACATCGATGTTGAACCTAACAGAGATAATGCAAATTGTGACGCTG
AAAATTACGGAGTTGATCAATCTATAGGAATATCGAATGGTGGAGATAAA
AGAGCTGATGGAATTGAATCTAGTGGAGATAACTCATTGTCTCAAAATAG
GAATGGAACTAGTGTCGAAAGCAATAAAACGATGAAAGTTGTCACTATCC
CAGTTGCATCTATTCCGAAACCCCGATCCCAATCCGAATTGGATGAACTG
ATGAAATCGGAACGTCAACAATATATGGATTTCGCTGAATGGCTAGAAGA
AGAACGGTTGCTACATGCTCAAAGAGACTTGCCTCTTCAATGGAGAGGAA
TCCATCGAAGGCTTAACGTTGCCTGGTCGGGACACGAATTACCATGATAT
TGAACCCAGTGACAGGCGCAAATCACCCGAACGGATAAATCACTTTAAGA
ACGATGCAAATTTTGATGAGACGACAAAAAGACGCGAGTTTAGCTTGACT
GGATCCATAAATGTTAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACAC
GGAGGAGAGCAATCATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATG
CCGCTCTCCCCAACTCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACA
GATTCGATTGAGAATCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGA
GAGTTACGTAAAACGAAGACGACGTCTAGTGTTTGAATCAGATACAGATG
AAAGCTCTACGCGGGAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTA
TTCTCACCGTCAACGTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTT
ATTTGACAAAGACGAAATTATAacttcaacacaaaaagacgaAAAACAAC
CGAAATATGATTTCGAAAATCATGATAATAAAACTACGTTTCATCTTATC
CATCAGAAGTATGAGACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCG
CACAGAAAACCGTGAACAAATTTCAGAGCTACCTACACTTGTACAGGTAA
ACAAAGGACTGTACCATTGTGAACCTTATCACAGAAATGACTTTGTTAAA
GCTATCAAGAATCAACAGAGAACGAAAACTCGACATAAACTTATTGTACA
TACTATGAAACCAGATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGG
CTGAAAACATTATTCAACGCTATTTTCGGAATTTGAAAAACGAAATTACG
GAACGAAGATCTGGCGAGAGCTCAAATGAAATTCTACCATATTTAAGTAC
AGATCTTGAACAGTCTATTGTTAGTCATACCTCGATAAGTATTGATGTCG
AAAACACAGGTCAAAAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTG
CGTGGTGATAATAAAGAATCAACATGTCTTAAGAAGCGATACTTGCAAGT
TAAACGCCGAAACCATACCAGGCCTATAACGCAAGGCTCAATCTTGTTAC
GAAGGCAATTGAAAAAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAA
GAAGAGGAACATAAGACTCAATCGATTTGGGAAAGGACTCGAaattcatt
acgtaatgttaaaAATTTAATGGAAATTGCTAATGAAATTCGATCGTTTG
ATAGGCGAAGCACCAAAGAATTGACATCGTTTCTAGAACTTCAACACCGA
GAGGAATTAATTAGAGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTC
TTTTCACGATATATCGAAtttatagtttgttttttttgcgtttttcatca
attttttaacGAATTNTATCGAATttatagtttgttttttacgtttttca
taaattttttaaCGAATTTCAGTCGACATAGAGTGGACTTTCATTCATTA
TTATTCTTCAGGCGAATTCAGTGAATCCTTGAAGACAGTGAAACTTGGGG
AAAACTAGGAAtgggcttttctagaaaaaaattgaatataaggGTTGGAG
GAtacaacattttttggaaatttaccggacattgtgaattttgacccccc
cggacaacggatctaaccccctggacaagcatcagttgacccccggacat
tcaaaatcaacCCTAATCAGAGAATGTTTGCCcctaaaacaaggcaaatt
ttgcagatttttcactacccggacaaaatatccaaaatatcCTCCAACGC
CATGTACAaagattttctggaagagcccaatgaagATTATAAGGAAACTT
ATACGAGCTAAAGTGATGACGCTAAAGCTTCAAACTTACACATGCAGTCT
TCATAGTACGAGTTTCATTTCATTGAAGGTTGAAGTTGAGCGAGTGAACT
TGTTTTTTAATGACCAGCAACTGAAATTCATTCCTTGcgtttttttcaga
atttttgagttttgataaatttgttaaCGTTTTTTagaattatatttata
tatggtttattattcttaaattttcaaaatgtttttttttgtatatcAGA
TTAAAAGGATATAACCACTTGTAAGTGGGTCATTCAGGTAAAATGAGGTA
CAGGGATGCGCCACTGTTATGTGCCAACTGTTCAGGGTCATTTTGTTAAT
CTCTGAAAATACCGGACAGGATGGCAAATTTGTTGAATCTTGAAAGCTCG
AAATACTTCTGATAGGGTCCAAATTGCATTTGACAGGTTTGATTTTCGCT
TAAAATTGACAGGTTTGATGTTTTGAACTTCAATGGCCGTCAAAACCAGT
ACCTCCTGAATCCATAGGATTTAGGATAGGATTTGGTTTGAGTTTGTCAA
GCCTATAACAAACACAGACACTCAGGATAATTTTATTCTCTGATGAACGC
TTTTACACCCCCTGTGTCACAgctccggtggaactttttcccttggtagg
gataaaaattcctattgaaaccCCGATTGGGATATAAATTCTCTTGTTCC
AAAATCCAGTTGGGATGGTATTGGAGTGCAATTCtttaacattgaatttt
gagtggggatgaaatcaaagtcagttcccgagtggggctaaaattccagg
gtattttcccactggggcgaaatttttgacaaattttccagtggggctgg
ggtcccattGGGTCTATGACACACGGgtgtacacccctgtgtcacagacc
cggtggaaatagaccttatcggagtttttaattttttcaaaaaagcgatg
cattgtgggattgtttcgagtgtattacaatagaattccctagaggaatt
cctaagagatttctattgtaatacactcgaaactatcccacaatgcatcg
cttttttagaaaaattaaaaactccgataaggtctattgaatcagattga
atttgttttcatccccatttgaaattcaatgaaaaaaaaaacatctccac
tggattttttgacttttgaacaataaaatttctatccatATTGGGATTTT
GATAAACATTTTCATCCTCAACAAGGGAGAAAGTCCCAcggggtctgtga
cacaggggtgttaaatgataaaatgataaaaattctcATTCTAACTGTGa
gaagaagttccaccggggtcACGAGACTGGAGTGTCATATAGCTTTTTTG
TCAAAGGATGCTGTATAGTATATAGTGTAATAAGAACAAAACGGGTTTTG
CATTTATAACTGAACTTACTATAGAGGGATTGATGTTGGCAACCTATTCA
GACACAACAGTATTTTCTATGAAAATGTCAGCGGTTGGTATTTTTAAGAA
TtagtgttttttgaaaattatttttagaatttatcaATAATAATCAGCCA
GACGGTAATGTAAATAATTTAAAACGATATATCTATAGAGAGATTTGCTT
GCttgctataatttttgaaaatgtctttCTTAGAAAAGAATCGTTTTTGA
AACGTTGACTCATTTAACTTTGTACTAATGTTTAGCTTATGTAACCACGG
TTATACTTCATTCAAGTCAAGAGTCTGATTTTGCAATATCTTCTTAACAA
GACCTCA
Run BLAST on NCBI

protein sequence of TCONS_00016414-protein

>TCONS_00016414-protein ID=TCONS_00016414-protein|Name=TCONS_00016414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=486bp
MLKETCLFNGEESIEGLTLPGRDTNYHDIEPSDRRKSPERINHFKNDANF
DETTKRREFSLTGSINVNEQFHLSFSSDTEESNHEVMFKRESKSDAALPN
SLLNLHGEVVGTDSIENLANLGSKTVREESYVKRRRRLVFESDTDESSTR
ESVVQDSEDECLFSPSTLESGKRHHLHSLFDKDEIITSTQKDEKQPKYDF
ENHDNKTTFHLIHQKYETGDLAPLLPFNRTENREQISELPTLVQVNKGLY
HCEPYHRNDFVKAIKNQQRTKTRHKLIVHTMKPDWKARRRKRTQMAENII
QRYFRNLKNEITERRSGESSNEILPYLSTDLEQSIVSHTSISIDVENTGQ
KSLKRKKCTKPLRGDNKESTCLKKRYLQVKRRNHTRPITQGSILLRRQLK
KRREKLAMRKKKEEEHKTQSIWERTRNSLRNVKNLMEIANEIRSFDRRST
KELTSFLELQHREELIRVRKSFDAPKGFSFHDISNL
Run BLAST on NCBI

transcript from alignment at sc0000237:190727..201276+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016414 ID=TCONS_00016414|Name=TCONS_00016414|organism=Clytia hemisphaerica|type=transcript|length=10550bp|location=Sequence derived from alignment at sc0000237:190727..201276+ (Clytia hemisphaerica)
cgctcataaaatgctgttatctgaaaaatatatgtgtgatttgaagtgcg atatctcacgaatgaaaagtgcatgaaggttgcctgatacaaNAAGATTT TCATTTACAACTTTCCAAGATATATTTGAAGATGACTGAACGTATCTCCA AGGACCGTTTCACATACGACCCTTATACACGTCTCACGTATGGTTACCTT GAATATTGTTTATGGAAAGAACAAAAAGATGATTGGGAAAGACTGAAGTC GGGGAATAATGGAGCGAATAGTCAAGGCAACGAGGCTAAGAATTGTTGGT CAAATTTtgaagacgaagaagaaaaagaagaagttcTAGAGACAGGTATG GATTGGTTACcgtattacacgaatattactaggcaagtattcaacggcct tgaaatttgaacGATCTGAAATTAGCActaatttttctgctttttcaagg aaacagcggctggttttaattaacgcggtttttattaacacgaaattttt caattcgtgttaataaaatgactagtaatgttcgtgtaataaggtaatta ATTTCATCTATTCATTAGGAAAATTTTTATCATAATGTGTTCATATACTT AAAAGATTCAAACCCCTTTACTGAGTTTTGTAGTTGTGAAAGTCTCCATT GTGCGTGATTCTTGGTACTCTGTatcagagtgtatctcacgtttatcgtt tcgtagtacatgtgcgcattgtctgtttgatgaagaatttcccgtacgga gacctctgcgatgaagtatgatttataaatagcaacacttctcttatCAT CTctcctctctcaccaacactccatcgcagcggtcggttttaaaaatctc aaatgagaaaagacaatgacattTGAGACAACAGACCTTCTACGGCAATG AGTTTTGAAAATAGCTGTAGGTCTGTATACAGATAAGATTCTTGGATGTA TGAGACGTATTCAATCGTATGAAATTGGTAGATTTTTCCGTGCTGTATAG ATTCCTAAAAACTTGTAAATACAGAATGGTGATCTTAAATAGGTTGGTTA CTTTCTTTGCACCTACAGATACGTCAGATCCAGTCGAACTGGTGTATCAC GCGGACCGCGCGCTCAGACATTGGAACAATATCGTGGAGAACACTGGTAC ATGGGATTTATTGCTACCCAAATACATGGAGATTTTTTCCTCTTATAACA TTGACAAAGAGGTCTGGAAACTACTTGAATTGCATGCTGGGAATAATTCG GACAATTATTTGTCGTACGTGTAAGTCAATTACCATTTGTTTGTAATAGT AATGATATGACATTGAGGGAAATTAGGGATTAATACCCcgagtttcattt tgaaatagtttgAAATAGCACGAACGAAGTGAGGGCTATTTCAAACTATT TCACAATGATATGAGGGGTATTAATCCTAATTTCACGAAATGTCATATCA TTCCTGGttaattatatgactgattttattattttttaaagagctATCCG AAATGGGGATTCCAGAAGTGAGACAGAAAATTTATGATGTTTTGCTATAA AAATATGATGTATTGCTTCAAAACACAAATCACTTTCAAATTGTTGCAGA TATTtcataaatataatatcaaacaacaaaaccaataATCCAAAATAATC CATAATACAACAATATTATTGGGAAGAAGATTCTTCCAAATTGTTTTTTC GGCTCCTTTGCAAAGACACCTGCATTATTATCAGCGAGTCAGGTTCATAA TCAGTGTCATTATTCTTTCTTTCGTATCTCCACACAAAATGTTCACAAAT GAAGTGTTCAAATTAGCTATCCTATATGATGGTTCGTATATTCTTTCGGA TATGTCCAATGTTCTCCCGTTCTCCTCAAGCCCACGAAACTCCGCCCATT TCTGAAAAGCATTTATCCAAATGTTCgcgtttttgtttttagaattttgc caTAATAAAAGAACAACATCATCCAATAGCTTGAATTTGTCGTcttcttt gtaaatttttcttgTACTTTTCCTCCTTTGACCAGACAGCTACTCAAAAT ATTTGTATCGAataatgtttactttttttgtgATCGAATGTTGCCAAAaa taatcgaatgttttgaaaattcgaaCGTACGTGGCGCGTGAAATTACGTT AGGAGAAAATggttttgatcaaaaatatttaggCGGGAGCGGGGTATTAC AAATCAAGCGGGGTATTACGAAATAATACCCCGCCGAAGGATAAGGGCAT GCAACCTAAATAAAACCAGTCATATAATTACAAGTTTGAATagagatttt taagaaaattaaaagctttaaactAAAGGAATTGCGACTACAGGCAGCAC AATGATACCTTTCCTCTTGTCAGTTGATGAGAGTTTTGAGtgtaatattt atttattaattttctcaaaatctcatttaaatagaccttttcataagtta cgtcacgaacatcacttgcctcgtattcaaacaattaccatggtgataaT GTCccttaagacatttttttttataaatataaagtagttttaataaaatc cgctgagAGTTAATCACCTGGTAatagtttcaaaacgaggcaagtgatgt tcgtgacgtaatttatgaaaaggtctattgttacATATTTCTAAATTCCT GATTTGCTTTATTTAAATATACTTCCAAATATGGACATTGGAAATGCATC CATTAGCAAGAATAATTCCTTTCTAAAGAACTAGTCCTTTTTTGCAATAG ATATCATTTCCAATATGTTTCGGCCTATACTGTCCTCAAGGACCAAAAAT AGGTGTGAACATTTCCTACTttcgaaaatttcgaaattcctAATATGGCG AAACTGGCTTTTTGGATATCTTCACCTTAATCTCTTGGGTATACTTTGGT TTTCTACGAAGCTGCACATACACTCAAACTAACCCAAGAATTTATAAGCG CTCTCAGGAACGTATCCCTCCCTCACTGAACAAGATTCAAGCTAGACTAG GTACCTCTCTCTCTTTCAGGTATCTGATCCTTTGGAACAACACTACAGGA GCAAATGAAATGGAAGACATGCTTCACGTCTATGAAAAACTAGCATCCTT AAATCCGTCTAACGCCTTGTTGCAAAGCTATATGGGTTATTTGAGAAAGT CGAGTAAGCAAATCTGTttttgaatacacgtttttttataagaacaaact gtataagaacgtaaggcttcgatggccaaaatgttaagaacatttcaagg ctttatggaccctaaaacacccaatttcttaggaaaatggacgaaaatac ccaaaaatggtgaaaaccaaaacatgttaagaacatttaagcttaaaaat aaaaaagttaaaggttttgttttaaataagagtgatatcgtttgcttact catcaattttgattcacCAGCTTTTTAACATCGTACGGATGTGGagtaag attggtcagaaagaggaaaagaaaaacagttttttgcttatatcagcata atataacaaaagggagacactgtcctggtatgaaatatgtgtctgatatg aaacaggaacacttatttaagaataaaacctttaagaataGAAGACTTCA AAGatcttggatgttcttatgaaaaatgtgtAAACATGTTCATGAATATT CTATACAATTAACAATATCTCAACATGCTTTGTCAGgcataaataaaaaa gtataaagcGCCTCCCTTTCTCTCCGCAGAACATTTTGGTGCATTACTAG ACTTGTTGGTCAGGCGTTTATCATACACGGAGTGCTCTCGAAGTTTTTTC GATTGGGATCTGCTGGCTTGTTTGCTGCAAGACAATCAACAGTTGGGTCC ACTCTTCCAGGGAAAACTCAGGTACGTTGACATTCATACCACAATCTCCA CCGACGCTTCTACTAACTTTCAAAGATTCCTCCAACCTTCAAATATTCTT CTAACCTTCAGGGCTCGAAGTagcggtcggacatcggacattgtccgacc caatttGCAACCCCTgtcggacattttgtccgacccagttgaaatcgtta tttcgagccatGAACCTTAACAGATTTTTCCAACTTTGAAAGATTCTTCG AACCTATCACGGACGGAAAAATTTGTATCTCTGCCACCTTAAAAAAGTGG AAAGTAGCATTTCcaagtttggaatttttttcagagACAAATGATAGATA AACAGTTAATATAAAGTTTCTATTGACCGCTAGGTGTATAAGAAATTATC TTCTTCTTATTGTAAATGTGGGATCTAGACTGATCTAGAATCTTCGTCTT CGCAACGAAAACAAAAGTGTCATTTGCCGCCTTTGGAAGCCACATCAATC CTAGTCTCAATCACAGAACTTGACAAAACCGCCGGTAGCATAGACAAAAG AAATTTAGCTTATCAAGCATCCTTTGttaggagcacgaatccgttagtgg gtGTCTGCAGCCTAACGTAACACTGCCATACCAATGTAGTTATTTAACGG TCCAAGTTATCATGCTCAACAAAATCTTTGATACCCAACAGTCCTTACAA CGTACACAGTAAACTTTGAGAATTAGTTAAAATTATAGAAATGCTTGGAT AATAGAGGTTTCAATTAGCAAGAGTCAACTATCATGAAATGGTTCAGTGA TAATACTGTATATCTTAAAGGTATTTGGCAATAAAGTAAATATCCAATAA TAAGAAAGCAAGGCAATTTGCGTTATGAATTGAGCTATGGAAGGTATAAA ATGGTTTTAATCTGTAACGTACGTGTGAACAGGGTCTAAATTGATTCCAt gatttttcattatttcagaGCGAAGAGGTATTGGTTTGACTTACACTACC AAAATAATCAACTTGCATCGCAAGAAGGGTCCAAAGaacatgaagaagtt gaagccttgaaaatgaaagtagcAAAAATCGCCGACCTATGTGAGTTACT ATTCCGAGTAAAATCCACTGAATCCTACACACTTTATAAGAAATATCAGA TTTGTAGCATAGGTTTTGCACTCACTTTGTGGTAAAATTGAGATCCTATT TTTTTGTTCTCCGCTAGATGAGACAGTGACACTATAGTCTCTATTAGGAA GAAATGTGTTTGTTGTTGGTGGTTTTTAGATCTCCCTAACGTCTACCTTA AGAGGacttattttggtattttgcctaactaacttcttgagttcacaaaa aagcttcaaataaggcaaaatagaacagatttacgctgtcatttgccaaa attagttcccgccaaaattaaaaagattaatCAATCGCAaaaagttctcg ccaaaattaaaaattctcaGGATTTTTGCcactcgtcaaaattagttccc gccaaaataagttcccttatgGTATTTTAGAATCTGCaagatttttcttt gaatttaaacttttgaCTCTTTTGAAATTCTGTTCCGGAATTCAAAAAAG TGTCGGAAAgtcatttttatttaattacaAGAGATACTTTCGAGATTGGT AATCTTCCATACNAAATCCACTGAATCcactttataaaaaatatcagatT TGTAGCATAGGTTTTGCACTCACTTGGTGGTAAAATTGAGATCCTATTTT TTTGTTCTCCGCTAGATGAGACAGTGACACTATAGTCTCTATTAGGAAGA AATGTGTTTGTTGTTGGTGGTTTTTTGATCTCCCTAACGTCTACCTTAAG AGGacttattttggtattttgcctaactaacttcttgagttcacaaaaaa gcttcaaataagacaaaatagaacagatttacgctgtcatttgccaaaat tagttcccgccaaaattaaaaagattaatcaatcacaaaaagttctcgcc aaaattaaaaattctcaGGATTTTTGCcactcgtcaaaattagttccctt atgGTATTTTAGAATCTGCaagatttttctttgaatttaaacttttgaCT CTTTTGAAATTCTGTTCCGGAATTCAAAAAAGTGTCGGAAAgtcattttt atttaattacaAGAGATACTTTCGAGATTGGTAATCTTCCATACCCTCTT TTCTCTGTAGGCACTTTATTTGCACCACAAGATGATGAAGAAGGAACACT CCCTAACAATCAAATAGAACATACAATACAACTACCTTCTTTTAATGACG AGGATGATGAACAGCTCTCAACCTCTGCTTTGTCAGATACTGACAATGAG GATGAACTGGACTTTGATGTCGATGATGAGCTCCAGTTTGATTTCTTTCT CCAATCTGATTGTGAAGAAAACATCGATGTTGAACCTAACAGAGATAATG CAAATTGTGACGCTGAAAATTACGGAGTTGATCAATCTATAGGAATATCG AATGGTGGAGATAAAAGAGCTGATGGAATTGAATCTAGTGGAGATAACTC ATTGTCTCAAAATAGGAATGGAACTAGTGTCGAAAGCAATAAAACGATGA AAGTTGTCACTATCCCAGTTGCATCTATTCCGAAACCCCGATCCCAATCC GAATTGGATGAACTGATGAAATCGGAACGTCAACAATATATGGATTTCGC TGAATGGCTAGAAGAAGAACGGTTGCTACATGCTCAAAGAGACTTGCCTG TAAGTGTTCTTTTGAACGGAATTGAATATCGGTGTGAAAAGATTGAAAGG GAAGAATTTTTCACTCATGTATCAAAAAATGACAATTCTCTTCGTGATCA GGAGGATGGATACGATGAGAATCTCCAGTTATTTAAAGACGAAGACTTTG TAACGATCCCAAAACCCGATCGGGAATCGGGTTACCATGGACGCAAGTTT ATTGAAGAACCATTACCCGATTGGGACTTAAAATCAAATAGACACTGCTC GTTACCACAACCCGATCTGAACTTTAGCTTCAATGGAGAGGAATCCATCG AAGGCTTAACGTTGCCTGGTCGGGACACGAATTACCATGATATTGAACCC AGTGACAGGCGCAAATCACCCGAACGGATAAATCACTTTAAGAACGATGC AAATTTTGATGAGACGACAAAAAGACGCGAGTTTAGCTTGACTGGATCCA TAAATGTTAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACACGGAGGAG AGCAATCATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATGCCGCTCT CCCCAACTCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACAGATTCGA TTGAGAATCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGAGAGTTAC GTAAAACGAAGACGACGTCTAGTGTTTGAATCAGATACAGATGAAAGCTC TACGCGGGAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTATTCTCAC CGTCAACGTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTTATTTGAC AAAGACGAAATTATAacttcaacacaaaaagacgaAAAACAACCGAAATA TGATTTCGAAAATCATGATAATAAAACTACGTTTCATCTTATCCATCAGA AGTATGAGACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCGCACAGAA AACCGTGAACAAATTTCAGAGCTACCTACACTTGTACAGGTAAACAAAGG ACTGTACCATTGTGAACCTTATCACAGAAATGACTTTGTTAAAGCTATCA AGAATCAACAGAGAACGAAAACTCGACATAAACTTATTGTACATACTATG AAACCAGATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGGCTGAAAA CATTATTCAACGCTATTTTCGGAATTTGAAAAACGAAATTACGGAACGAA GATCTGGCGAGAGCTCAAATGAAATTCTACCATATTTAAGTACAGATCTT GAACAGTCTATTGTTAGTCATACCTCGATAAGTATTGATGTCGAAAACAC AGGTCAAAAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTGCGTGGTG ATAATAAAGAATCAACATGTCTTAAGAAGCGATACTTGCAAGTTAAACGC CGAAACCATACCAGGCCTATAACGCAAGGCTCAATCTTGTTACGAAGGCA ATTGAAAAAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAAGAAGAGG AACATAAGACTCAATCGATTTGGGAAAGGACTCGAaattcattacgtaat gttaaaAATTTAATGGAAATTGCTAATGAAATTCGATCGTTTGATAGGCG AAGCACCAAAGAATTGACATCGTTTCTAGAACTTCAACACCGAGAGGAAT TAATTAGAGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTCTTTTCAC GATATATCGAAtttatagtttgttttttttgcgtttttcatcaatttttt aacGAATTNTATCGAATttatagtttgttttttacgtttttcataaattt tttaaCGAATTTCAGTCGACATAGAGTGGACTTTCATTCATTATTATTCT TCAGGCGAATTCAGTGAATCCTTGAAGACAGTGAAACTTGGGGAAAACTA GGAAtgggcttttctagaaaaaaattgaatataaggGTTGGAGGAtacaa cattttttggaaatttaccggacattgtgaattttgacccccccggacaa cggatctaaccccctggacaagcatcagttgacccccggacattcaaaat caacCCTAATCAGAGAATGTTTGCCcctaaaacaaggcaaattttgcaga tttttcactacccggacaaaatatccaaaatatcCTCCAACGCCATGTAC AaagattttctggaagagcccaatgaagATTATAAGGAAACTTATACGAG CTAAAGTGATGACGCTAAAGCTTCAAACTTACACATGCAGTCTTCATAGT ACGAGTTTCATTTCATTGAAGGTTGAAGTTGAGCGAGTGAACTTGTTTTT TAATGACCAGCAACTGAAATTCATTCCTTGcgtttttttcagaatttttg agttttgataaatttgttaaCGTTTTTTagaattatatttatatatggtt tattattcttaaattttcaaaatgtttttttttgtatatcAGATTAAAAG GATATAACCACTTGTAAGTGGGTCATTCAGGTAAAATGAGGTACAGGGAT GCGCCACTGTTATGTGCCAACTGTTCAGGGTCATTTTGTTAATCTCTGAA AATACCGGACAGGATGGCAAATTTGTTGAATCTTGAAAGCTCGAAATACT TCTGATAGGGTCCAAATTGCATTTGACAGGTTTGATTTTCGCTTAAAATT GACAGGTTTGATGTTTTGAACTTCAATGGCCGTCAAAACCAGTACCTCCT GAATCCATAGGATTTAGGATAGGATTTGGTTTGAGTTTGTCAAGCCTATA ACAAACACAGACACTCAGGATAATTTTATTCTCTGATGAACGCTTTTACA CCCCCTGTGTCACAgctccggtggaactttttcccttggtagggataaaa attcctattgaaaccCCGATTGGGATATAAATTCTCTTGTTCCAAAATCC AGTTGGGATGGTATTGGAGTGCAATTCtttaacattgaattttgagtggg gatgaaatcaaagtcagttcccgagtggggctaaaattccagggtatttt cccactggggcgaaatttttgacaaattttccagtggggctggggtccca ttGGGTCTATGACACACGGgtgtacacccctgtgtcacagacccggtgga aatagaccttatcggagtttttaattttttcaaaaaagcgatgcattgtg ggattgtttcgagtgtattacaatagaattccctagaggaattcctaaga gatttctattgtaatacactcgaaactatcccacaatgcatcgctttttt agaaaaattaaaaactccgataaggtctattgaatcagattgaatttgtt ttcatccccatttgaaattcaatgaaaaaaaaaacatctccactggattt tttgacttttgaacaataaaatttctatccatATTGGGATTTTGATAAAC ATTTTCATCCTCAACAAGGGAGAAAGTCCCAcggggtctgtgacacaggg gtgttaaatgataaaatgataaaaattctcATTCTAACTGTGagaagaag ttccaccggggtcACGAGACTGGAGTGTCATATAGCTTTTTTGTCAAAGG ATGCTGTATAGTATATAGTGTAATAAGAACAAAACGGGTTTTGCATTTAT AACTGAACTTACTATAGAGGGATTGATGTTGGCAACCTATTCAGACACAA CAGTATTTTCTATGAAAATGTCAGCGGTTGGTATTTTTAAGAATtagtgt tttttgaaaattatttttagaatttatcaATAATAATCAGCCAGACGGTA ATGTAAATAATTTAAAACGATATATCTATAGAGAGATTTGCTTGCttgct ataatttttgaaaatgtctttCTTAGAAAAGAATCGTTTTTGAAACGTTG ACTCATTTAACTTTGTACTAATGTTTAGCTTATGTAACCACGGTTATACT TCATTCAAGTCAAGAGTCTGATTTTGCAATATCTTCTTAACAAGACCTCA

Coding sequence (CDS) from alignment at sc0000237:190727..201276+

>TCONS_00016414 ID=TCONS_00016414|Name=TCONS_00016414|organism=Clytia hemisphaerica|type=CDS|length=2922bp|location=Sequence derived from alignment at sc0000237:190727..201276+ (Clytia hemisphaerica)
ATGCTCAAAGAGACTTGCCTCTTCAATGGAGAGGAATCCATCGAAGGCTT
AACGTTGCCTGGTCGGGACACGAATTACCATGATATTGAACCCAGTGACA
GGCGCAAATCACCCGAACGGATAAATCACTTTAAGAACGATGCAAATTTT
GATGAGACGACAAAAAGACGCGAGTTTAGCTTGACTGGATCCATAAATGT
TAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACACGGAGGAGAGCAATC
ATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATGCCGCTCTCCCCAAC
TCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACAGATTCGATTGAGAA
TCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGAGAGTTACGTAAAAC
GAAGACGACGTCTAGTGTTTGAATCAGATACAGATGAAAGCTCTACGCGG
GAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTATTCTCACCGTCAAC
GTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTTATTTGACAAAGACG
AAATTATAacttcaacacaaaaagacgaAAAACAACCGAAATATGATTTC
GAAAATCATGATAATAAAACTACGTTTCATCTTATCCATCAGAAGTATGA
GACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCGCACAGAAAACCGTG
AACAAATTTCAGAGCTACCTACACTTGTACAGGTAAACAAAGGACTGTAC
CATTGTGAACCTTATCACAGAAATGACTTTGTTAAAGCTATCAAGAATCA
ACAGAGAACGAAAACTCGACATAAACTTATTGTACATACTATGAAACCAG
ATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGGCTGAAAACATTATT
CAACGCTATTTTCGGAATTTGAAAAACGAAATTACGGAACGAAGATCTGG
CGAGAGCTCAAATGAAATTCTACCATATTTAAGTACAGATCTTGAACAGT
CTATTGTTAGTCATACCTCGATAAGTATTGATGTCGAAAACACAGGTCAA
AAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTGCGTGGTGATAATAA
AGAATCAACATGTCTTAAGAAGCGATACTTGCAAGTTAAACGCCGAAACC
ATACCAGGCCTATAACGCAAGGCTCAATCTTGTTACGAAGGCAATTGAAA
AAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAAGAAGAGGAACATAA
GACTCAATCGATTTGGGAAAGGACTCGAaattcattacgtaatgttaaaA
ATTTAATGGAAATTGCTAATGAAATTCGATCGTTTGATAGGCGAAGCACC
AAAGAATTGACATCGTTTCTAGAACTTCAACACCGAGAGGAATTAATTAG
AGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTCTTTTCACGATATAT
CGAAtttatagATGCTCAAAGAGACTTGCCTCTTCAATGGAGAGGAATCC
ATCGAAGGCTTAACGTTGCCTGGTCGGGACACGAATTACCATGATATTGA
ACCCAGTGACAGGCGCAAATCACCCGAACGGATAAATCACTTTAAGAACG
ATGCAAATTTTGATGAGACGACAAAAAGACGCGAGTTTAGCTTGACTGGA
TCCATAAATGTTAATGAGCAGTTTCATTTGAGCTTTTCGTCAGACACGGA
GGAGAGCAATCATGAAGTCATGTTTAAAAGAGAATCGAAAAGTGATGCCG
CTCTCCCCAACTCTCTGCTAAATCTACATGGAGAAGTTGTAGGAACAGAT
TCGATTGAGAATCTTGCCAATCTTGGTTCGAAAACAGTGAGGGAGGAGAG
TTACGTAAAACGAAGACGACGTCTAGTGTTTGAATCAGATACAGATGAAA
GCTCTACGCGGGAGAGTGTTGTGCAAGACTCTGAAGATGAATGTTTATTC
TCACCGTCAACGTTGGAGAGCGGAAAACGTCATCATTTGCACTCCTTATT
TGACAAAGACGAAATTATAacttcaacacaaaaagacgaAAAACAACCGA
AATATGATTTCGAAAATCATGATAATAAAACTACGTTTCATCTTATCCAT
CAGAAGTATGAGACGGGAGACCTAGCTCCTTTGCTACCTTTCAATCGCAC
AGAAAACCGTGAACAAATTTCAGAGCTACCTACACTTGTACAGGTAAACA
AAGGACTGTACCATTGTGAACCTTATCACAGAAATGACTTTGTTAAAGCT
ATCAAGAATCAACAGAGAACGAAAACTCGACATAAACTTATTGTACATAC
TATGAAACCAGATTGGAAAGCCAGGCGTAGGAAACGCACGCAAATGGCTG
AAAACATTATTCAACGCTATTTTCGGAATTTGAAAAACGAAATTACGGAA
CGAAGATCTGGCGAGAGCTCAAATGAAATTCTACCATATTTAAGTACAGA
TCTTGAACAGTCTATTGTTAGTCATACCTCGATAAGTATTGATGTCGAAA
ACACAGGTCAAAAGTCTTTGAAAAGGAAGAAGTGTACAAAACCTTTGCGT
GGTGATAATAAAGAATCAACATGTCTTAAGAAGCGATACTTGCAAGTTAA
ACGCCGAAACCATACCAGGCCTATAACGCAAGGCTCAATCTTGTTACGAA
GGCAATTGAAAAAGAGACGAGAGAAATTAGCGATGAGGAAGAAGAAAGAA
GAGGAACATAAGACTCAATCGATTTGGGAAAGGACTCGAaattcattacg
taatgttaaaAATTTAATGGAAATTGCTAATGAAATTCGATCGTTTGATA
GGCGAAGCACCAAAGAATTGACATCGTTTCTAGAACTTCAACACCGAGAG
GAATTAATTAGAGTGCGTAAATCGTTTGATGCTCCGAAAGGGTTTTCTTT
TCACGATATATCGAAtttatag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009168XLOC_009168Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016414-proteinTCONS_00016414-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016414-exon-sc0000237-1491911889:190727..191071TCONS_00016414-exon-sc0000237-1491911889:190727..191071Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1510915933:190727..191071TCONS_00016414-exon-sc0000237-1510915933:190727..191071Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1575043694:190727..191071TCONS_00016414-exon-sc0000237-1575043694:190727..191071Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1491911889:191795..191996TCONS_00016414-exon-sc0000237-1491911889:191795..191996Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1510915933:191795..191996TCONS_00016414-exon-sc0000237-1510915933:191795..191996Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1575043694:191795..191996TCONS_00016414-exon-sc0000237-1575043694:191795..191996Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1491911889:193746..193879TCONS_00016414-exon-sc0000237-1491911889:193746..193879Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1510915933:193746..193879TCONS_00016414-exon-sc0000237-1510915933:193746..193879Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1575043694:193746..193879TCONS_00016414-exon-sc0000237-1575043694:193746..193879Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1491911889:194456..194597TCONS_00016414-exon-sc0000237-1491911889:194456..194597Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1510915933:194456..194597TCONS_00016414-exon-sc0000237-1510915933:194456..194597Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1575043694:194456..194597TCONS_00016414-exon-sc0000237-1575043694:194456..194597Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1491911889:195545..195666TCONS_00016414-exon-sc0000237-1491911889:195545..195666Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1510915933:195545..195666TCONS_00016414-exon-sc0000237-1510915933:195545..195666Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1575043694:195545..195666TCONS_00016414-exon-sc0000237-1575043694:195545..195666Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1491911889:196787..197325TCONS_00016414-exon-sc0000237-1491911889:196787..197325Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1510915933:196787..197325TCONS_00016414-exon-sc0000237-1510915933:196787..197325Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1575043694:196787..197325TCONS_00016414-exon-sc0000237-1575043694:196787..197325Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1491911889:197604..201276TCONS_00016414-exon-sc0000237-1491911889:197604..201276Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1510915933:197604..201276TCONS_00016414-exon-sc0000237-1510915933:197604..201276Clytia hemisphaericaexon
TCONS_00016414-exon-sc0000237-1575043694:197604..201276TCONS_00016414-exon-sc0000237-1575043694:197604..201276Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000237supercontigsc0000237:190727..201276 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.141986 0 0 0 0.282782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016414 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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