TCONS_00016536 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016536
Unique NameTCONS_00016536
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2627

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016536 ID=TCONS_00016536|Name=TCONS_00016536|organism=Clytia hemisphaerica|type=transcript|length=2627bp
ATCACTAAAAAAGCCGAAAATTAATTACCGTTCTATGCGTGTGAAAGCCT
TACGGCAACGTGCAAATGCTAACTGGTTGCTTGTTCGGTCAATGCTTTCT
GACATTGTTGATTTTGGTCGTGTCACAGGCCGAGTTTTTTCGCCAATGAA
ATTCACAGCGTACAAACAACGATCCAGTCCAACTATCATGAAATTGAAAC
GCTTTCGGGCTAAGAAATTGCGAGCAAGGGCCAACTGGTTGTTAGTTTCT
TCAAGAGTAAAAGACATCGTGCGGTATCCAGACAAGTTACGCCGTGAGCG
AGTTACGTGGGACTCATACTTAGTCGAACTTAACATGAACCGTCGAAAAG
CGACACGTAATAAGTATGTGGCAGGAGTTTTACGAGCACGTGCTAATTGG
ATGCTTGTACGTTCAAGAATCCCTGACATTATTCTGTACGGAAAGTACCG
ACGGTATTCTAAGAAAGAACTCCCTGAATCTCGTCATGCCTCTCCTGTTA
AAACCAAAAGCAAACCTCTTAAAAGGAGCGAGAGTGATCGAGTACGTTCT
CGGCGGACCGAAAAACCAATCGTCGGAACCGACAAATTGCAGCGAAGTTC
GACAAAGCACCGTAACAATGACGACGAAAAGCGTCGAAAACATCATCAGC
ATCGTTCGACCAAAATCAAATCGCCGCGGCACAGTCGTAAAGGAGCCACC
CAAATCGCTCTCGAAAACTGGAGTAAACTCGTCCAAAATACGCAACAAGC
AGTCAAAAGAACGCCCTCTACGAAATCGAAATCAAATAAAGAGGTTTATA
AAAGTTGGGACGATTTGATTCAACGAACTTCCACTTCAGACAAGAAGAAA
AAGGTTCACCGCTCTTCTTCCACAAGACGAAAACAAAACGCCTTGAACAA
CTGGGATAACCTCACCGCGCATACCAATACAAAAGACCAACAGAAATCGA
AAGAAGCTCTTGATAATTGGGATCAGCTTGTTAAAAAGACAAAAGGAACT
AATGTTCAACGTTCAACCTCATTGAAATCAAAAGGAGAAGCACCGCATAA
AAATTGGGATATTTTGATACAGAATACCTCTCGTGAGATCAAACAACGAT
CATCCCTACGATCAAAAGACGCGTTCATGAATTGGGATAATTTACTACGA
AGcaaaaatacagaccagaagaAAAGCTTAGAAAACTGGGATCATCTTAT
TGTGGGCACTTCAACTTTATCTTCGCCGCGTCGTGCTAAGAGTGTTGAAA
GGCTCTCTCGCAGGTCACAATCTGAGCAGCATTGGCATGACTTGTTTGAC
TCCGCCAAACGTGAAAAGAGGGATGCAGACGGAAACTGGCATCGGTTGAC
AGGTAATGCACATTATGAAAAAGAAGCTGCTGACCGCAACTGGGGTCATC
TTGTACATTCTACAAAAACTCCTCCCAAGTCATCAAATCGTGCAAAGAAA
GGTTGGGATAAAATCAGGACCAGTCTTGGACGAAATTTGACTCATAAAGC
GGATAAAGGACAACCTGTGATGAGTCAAGCACAAGAAGATCGCGCCTACA
AAAATTGGTGGACTTTGATCTCGACAGATGAAGATTCGAAAAGACCGGCA
GCCAAAGAAGATATCAGAGACAAAGCTGTATGTAAAACTACTGAAGATCT
TGTTTGCACTTCTCAGGCTAACGACACAGAGGCTACTGCTTGTCAAAATT
GGAATTCTTTAATCAAAGGCACGGACACGTCAGATGTTGAGAGAACGAAC
AAAAAAGCGCTGGAAGATTGGTACCAACTTATATCAAGAACCGAGGTGGA
ATCTGTCAACAAAGATGAAGCCATAAACAACTGGCATAACTTGATTCGGA
TGGTAAGCACAACTAACGAAGAAGCAGAACAGAATTGGCACCAACTGATC
CAATCTGTTCAACCGACAGCTGACATGTCTACGGAAGCCGAAAATCATTG
GCATAATTTGATCAAAGCTAAGAAAACGGGACCAATGTATAACTCAGAAA
AGGCGCTTTATCATTGGGATAAATTAATTGAAGGGCGCATTATTCGACGT
ACAGCTTCACAAACGCCCTCTTCCTCAATGAGCACCCGTGATGGAGTGAT
GGACAGCTTACGTAAACATCCTTCCAAAGACGGTACCTTTAAAAAGGTAT
CAGACACTCCTCCGTCTGGCTTCCGTTTATTATACGACAAAAACCAAGCA
CAATCTACCGGAAACCACGAACCAAAAGTCATGCGCTTGAACATCAGAAA
TGATTTCGGACAATTCAATGACGTCAGACTTAAGATGACGTCACCGAACA
AAAGCATGCTTTCTGCGCATCTGAAGGAGAACACTGATGGAACTTTTACG
ATTTTCTGTTGTCCGAGTATTGATGAACCTTTCAATATTTGTGTCTCACT
CGGCGGCTCACAGTTTGAGAACGATGTCCAAGTATTAACTTTAAAAGGAG
ATCTTTCCCTCCTCAAGACTCAAGTTGCAACTAGACTAGCATGCAAGACG
ATCAGTTTGATTCGTTGGCACTTAACTCCCGGTTTACTTTCAAAACAAGG
GGAGAAAATCGTGGCTGGGAAATAGGTTATTTGATAAGatttcatattat
ttttggatttttatgtACATACTAGTA
Run BLAST on NCBI

protein sequence of TCONS_00016536-protein

>TCONS_00016536-protein ID=TCONS_00016536-protein|Name=TCONS_00016536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=857bp
SLKKPKINYRSMRVKALRQRANANWLLVRSMLSDIVDFGRVTGRVFSPMK
FTAYKQRSSPTIMKLKRFRAKKLRARANWLLVSSRVKDIVRYPDKLRRER
VTWDSYLVELNMNRRKATRNKYVAGVLRARANWMLVRSRIPDIILYGKYR
RYSKKELPESRHASPVKTKSKPLKRSESDRVRSRRTEKPIVGTDKLQRSS
TKHRNNDDEKRRKHHQHRSTKIKSPRHSRKGATQIALENWSKLVQNTQQA
VKRTPSTKSKSNKEVYKSWDDLIQRTSTSDKKKKVHRSSSTRRKQNALNN
WDNLTAHTNTKDQQKSKEALDNWDQLVKKTKGTNVQRSTSLKSKGEAPHK
NWDILIQNTSREIKQRSSLRSKDAFMNWDNLLRSKNTDQKKSLENWDHLI
VGTSTLSSPRRAKSVERLSRRSQSEQHWHDLFDSAKREKRDADGNWHRLT
GNAHYEKEAADRNWGHLVHSTKTPPKSSNRAKKGWDKIRTSLGRNLTHKA
DKGQPVMSQAQEDRAYKNWWTLISTDEDSKRPAAKEDIRDKAVCKTTEDL
VCTSQANDTEATACQNWNSLIKGTDTSDVERTNKKALEDWYQLISRTEVE
SVNKDEAINNWHNLIRMVSTTNEEAEQNWHQLIQSVQPTADMSTEAENHW
HNLIKAKKTGPMYNSEKALYHWDKLIEGRIIRRTASQTPSSSMSTRDGVM
DSLRKHPSKDGTFKKVSDTPPSGFRLLYDKNQAQSTGNHEPKVMRLNIRN
DFGQFNDVRLKMTSPNKSMLSAHLKENTDGTFTIFCCPSIDEPFNICVSL
GGSQFENDVQVLTLKGDLSLLKTQVATRLACKTISLIRWHLTPGLLSKQG
EKIVAGK
Run BLAST on NCBI

transcript from alignment at sc0000241:234246..237176+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016536 ID=TCONS_00016536|Name=TCONS_00016536|organism=Clytia hemisphaerica|type=transcript|length=2931bp|location=Sequence derived from alignment at sc0000241:234246..237176+ (Clytia hemisphaerica)
ATCACTAAAAAAGCCGAAAATTAATTACCGTTCTATGCGTGTGAAAGCCT TACGGCAACGTGCAAATGCTAACTGGTTGCTTGTTCGGTCAATGCTTTCT GACATTGTTGATTTTGGTCGTGTCACAGGCCGAGTTTTTTCGCCAATGAA ATTCACAGCGTACAAACAACGATCCAGTCCAACTATCATGAAATTGAAAC GCTTTCGGGCTAAGAAATTGCGAGCAAGGGCCAACTGGTTGTTAGTTTCT TCAAGAGTAAAAGACATCGTGCGGTATCCAGACAAGTTACGCCGTGAGCG AGTTACGTGGGACTCATACTTAGTCGAACTTAACATGAACCGTCGAAAAG CGACACGTAATAAGTATGTGGCAGGAGTTTTACGAGCACGTGCTAATTGG ATGCTTGTACGTTCAAGAATCCCTGACATTATTCTGTACGGAAAGTACCG ACGGTATTCTAAGAAAGAACTCCCTGAATCTCGTCATGCCTCTCCTGTTA AAACCAAAAGCAAACCTCTTAAAAGGAGCGAGAGTGATCGAGTACGTTCT CGGCGGACCGAAAAACCAATCGTCGGAACCGACAAATTGCAGCGAAGTTC GACAAAGCACCGTAACAATGACGACGAAAAGCGTCGAAAACATCATCAGC ATCGTTCGACCAAAATCAAATCGCCGCGGCACAGTCGTAAAGGAGCCACC CAAATCGCTCTCGAAAACTGGAGTAAACTCGTCCAAAATACGCAACAAGC AGTCAAAAGAACGCCCTCTACGAAATCGAAATCAAATAAAGAGGTTTATA AAAGTTGGGACGATTTGATTCAACGAACTTCCACTTCAGACAAGAAGAAA AAGGTTCACCGCTCTTCTTCCACAAGACGAAAACAAAACGCCTTGAACAA CTGGGATAACCTCACCGCGCATACCAATACAAAAGACCAACAGAAATCGA AAGAAGCTCTTGATAATTGGGATCAGCTTGTTAAAAAGACAAAAGGAACT AATGTTCAACGTTCAACCTCATTGAAATCAAAAGGAGAAGCACCGCATAA AAATTGGGATATTTTGATACAGAATACCTCTCGTGAGATCAAACAACGAT CATCCCTACGATCAAAAGACGCGTTCATGAATTGGGATAATTTACTACGA AGcaaaaatacagaccagaagaAAAGCTTAGAAAACTGGGATCATCTTAT TGTGGGCACTTCAACTTTATCTTCGCCGCGTCGTGCTAAGAGTGTTGAAA GGCTCTCTCGCAGGTCACAATCTGAGCAGCATTGGCATGACTTGTTTGAC TCCGCCAAACGTGAAAAGAGGGATGCAGACGGAAACTGGCATCGGTTGAC AGGTAATGCACATTATGAAAAAGAAGCTGCTGACCGCAACTGGGGTCATC TTGTACATTCTACAAAAACTCCTCCCAAGTCATCAAATCGTGCAAAGAAA GGTTGGGATAAAATCAGGACCAGTCTTGGACGAAATTTGACTCATAAAGC GGATAAAGGACAACCTGTGATGAGTCAAGCACAAGAAGATCGCGCCTACA AAAATTGGTGGACTTTGATCTCGACAGATGAAGATTCGAAAAGACCGGCA GCCAAAGAAGATATCAGAGACAAAGCTGTATGTAAAACTACTGAAGATCT TGTTTGCACTTCTCAGGCTAACGACACAGAGGCTACTGCTTGTCAAAATT GGAATTCTTTAATCAAAGGTACATTAAATGTAAAGAAAGTTCGGATGAGA AACAAACTTGAGAAATAGGATCAATACAATCTGCTTTTTTTTAAGTTATC TTGACAGCTTGTAGCTTTTCCgaactttcttttttgatatTAAATCATCC GAATAATTTTTACACTTGATGTCCTAATTTTGATGTGttcgcaaaaattt taaatcgcTTTCTATCTTAGTTCTTTTACCTATTGCTAAATTGAATAGTT CATCCTTCGCTGACAATATCTTAAGTAAAAATTTCTCACAAGACTTtgtg tttttctttctcttcgTCACAGGCACGGACACGTCAGATGTTGAGAGAAC GAACAAAAAAGCGCTGGAAGATTGGTACCAACTTATATCAAGAACCGAGG TGGAATCTGTCAACAAAGATGAAGCCATAAACAACTGGCATAACTTGATT CGGATGGTAAGCACAACTAACGAAGAAGCAGAACAGAATTGGCACCAACT GATCCAATCTGTTCAACCGACAGCTGACATGTCTACGGAAGCCGAAAATC ATTGGCATAATTTGATCAAAGCTAAGAAAACGGGACCAATGTATAACTCA GAAAAGGCGCTTTATCATTGGGATAAATTAATTGAAGGGCGCATTATTCG ACGTACAGCTTCACAAACGCCCTCTTCCTCAATGAGCACCCGTGATGGAG TGATGGACAGCTTACGTAAACATCCTTCCAAAGACGGTACCTTTAAAAAG GTATCAGACACTCCTCCGTCTGGCTTCCGTTTATTATACGACAAAAACCA AGCACAATCTACCGGAAACCACGAACCAAAAGTCATGCGCTTGAACATCA GAAATGATTTCGGACAATTCAATGACGTCAGACTTAAGATGACGTCACCG AACAAAAGCATGCTTTCTGCGCATCTGAAGGAGAACACTGATGGAACTTT TACGATTTTCTGTTGTCCGAGTATTGATGAACCTTTCAATATTTGTGTCT CACTCGGCGGCTCACAGTTTGAGAACGATGTCCAAGTATTAACTTTAAAA GGAGATCTTTCCCTCCTCAAGACTCAAGTTGCAACTAGACTAGCATGCAA GACGATCAGTTTGATTCGTTGGCACTTAACTCCCGGTTTACTTTCAAAAC AAGGGGAGAAAATCGTGGCTGGGAAATAGGTTATTTGATAAGatttcata ttatttttggatttttatgtACATACTAGTA

Coding sequence (CDS) from alignment at sc0000241:234246..237176+

>TCONS_00016536 ID=TCONS_00016536|Name=TCONS_00016536|organism=Clytia hemisphaerica|type=CDS|length=5148bp|location=Sequence derived from alignment at sc0000241:234246..237176+ (Clytia hemisphaerica)
TCACTAAAAAAGCCGAAAATTAATTACCGTTCTATGCGTGTGAAAGCCTT
ACGGCAACGTGCAAATGCTAACTGGTTGCTTGTTCGGTCAATGCTTTCTG
ACATTGTTGATTTTGGTCGTGTCACAGGCCGAGTTTTTTCGCCAATGAAA
TTCACAGCGTACAAACAACGATCCAGTCCAACTATCATGAAATTGAAACG
CTTTCGGGCTAAGAAATTGCGAGCAAGGGCCAACTGGTTGTTAGTTTCTT
CAAGAGTAAAAGACATCGTGCGGTATCCAGACAAGTTACGCCGTGAGCGA
GTTACGTGGGACTCATACTTAGTCGAACTTAACATGAACCGTCGAAAAGC
GACACGTAATAAGTATGTGGCAGGAGTTTTACGAGCACGTGCTAATTGGA
TGCTTGTACGTTCAAGAATCCCTGACATTATTCTGTACGGAAAGTACCGA
CGGTATTCTAAGAAAGAACTCCCTGAATCTCGTCATGCCTCTCCTGTTAA
AACCAAAAGCAAACCTCTTAAAAGGAGCGAGAGTGATCGAGTACGTTCTC
GGCGGACCGAAAAACCAATCGTCGGAACCGACAAATTGCAGCGAAGTTCG
ACAAAGCACCGTAACAATGACGACGAAAAGCGTCGAAAACATCATCAGCA
TCGTTCGACCAAAATCAAATCGCCGCGGCACAGTCGTAAAGGAGCCACCC
AAATCGCTCTCGAAAACTGGAGTAAACTCGTCCAAAATACGCAACAAGCA
GTCAAAAGAACGCCCTCTACGAAATCGAAATCAAATAAAGAGGTTTATAA
AAGTTGGGACGATTTGATTCAACGAACTTCCACTTCAGACAAGAAGAAAA
AGGTTCACCGCTCTTCTTCCACAAGACGAAAACAAAACGCCTTGAACAAC
TGGGATAACCTCACCGCGCATACCAATACAAAAGACCAACAGAAATCGAA
AGAAGCTCTTGATAATTGGGATCAGCTTGTTAAAAAGACAAAAGGAACTA
ATGTTCAACGTTCAACCTCATTGAAATCAAAAGGAGAAGCACCGCATAAA
AATTGGGATATTTTGATACAGAATACCTCTCGTGAGATCAAACAACGATC
ATCCCTACGATCAAAAGACGCGTTCATGAATTGGGATAATTTACTACGAA
GcaaaaatacagaccagaagaAAAGCTTAGAAAACTGGGATCATCTTATT
GTGGGCACTTCAACTTTATCTTCGCCGCGTCGTGCTAAGAGTGTTGAAAG
GCTCTCTCGCAGGTCACAATCTGAGCAGCATTGGCATGACTTGTTTGACT
CCGCCAAACGTGAAAAGAGGGATGCAGACGGAAACTGGCATCGGTTGACA
GGTAATGCACATTATGAAAAAGAAGCTGCTGACCGCAACTGGGGTCATCT
TGTACATTCTACAAAAACTCCTCCCAAGTCATCAAATCGTGCAAAGAAAG
GTTGGGATAAAATCAGGACCAGTCTTGGACGAAATTTGACTCATAAAGCG
GATAAAGGACAACCTGTGATGAGTCAAGCACAAGAAGATCGCGCCTACAA
AAATTGGTGGACTTTGATCTCGACAGATGAAGATTCGAAAAGACCGGCAG
CCAAAGAAGATATCAGAGACAAAGCTGTATGTAAAACTACTGAAGATCTT
GTTTGCACTTCTCAGGCTAACGACACAGAGGCTACTGCTTGTCAAAATTG
GAATTCTTTAATCAAAGGCACGGACACGTCAGATGTTGAGAGAACGAACA
AAAAAGCGCTGGAAGATTGGTACCAACTTATATCAAGAACCGAGGTGGAA
TCTGTCAACAAAGATGAAGCCATAAACAACTGGCATAACTTGATTCGGAT
GGTAAGCACAACTAACGAAGAAGCAGAACAGAATTGGCACCAACTGATCC
AATCTGTTCAACCGACAGCTGACATGTCTACGGAAGCCGAAAATCATTGG
CATAATTTGATCAAAGCTAAGAAAACGGGACCAATGTATAACTCAGAAAA
GGCGCTTTATCATTGGGATAAATTAATTGAAGGGCGCATTATTCGACGTA
CAGCTTCACAAACGCCCTCTTCCTCAATGAGCACCCGTGATGGAGTGATG
GACAGCTTACGTAAACATCCTTCCAAAGACGGTACCTTTAAAAAGGTATC
AGACACTCCTCCGTCTGGCTTCCGTTTATTATACGACAAAAACCAAGCAC
AATCTACCGGAAACCACGAACCAAAAGTCATGCGCTTGAACATCAGAAAT
GATTTCGGACAATTCAATGACGTCAGACTTAAGATGACGTCACCGAACAA
AAGCATGCTTTCTGCGCATCTGAAGGAGAACACTGATGGAACTTTTACGA
TTTTCTGTTGTCCGAGTATTGATGAACCTTTCAATATTTGTGTCTCACTC
GGCGGCTCACAGTTTGAGAACGATGTCCAAGTATTAACTTTAAAAGGAGA
TCTTTCCCTCCTCAAGACTCAAGTTGCAACTAGACTAGCATGCAAGACGA
TCAGTTTGATTCGTTGGCACTTAACTCCCGGTTTACTTTCAAAACAAGGG
GAGAAAATCGTGGCTGGGAAATAGTCACTAAAAAAGCCGAAAATTAATTA
CCGTTCTATGCGTGTGAAAGCCTTACGGCAACGTGCAAATGCTAACTGGT
TGCTTGTTCGGTCAATGCTTTCTGACATTGTTGATTTTGGTCGTGTCACA
GGCCGAGTTTTTTCGCCAATGAAATTCACAGCGTACAAACAACGATCCAG
TCCAACTATCATGAAATTGAAACGCTTTCGGGCTAAGAAATTGCGAGCAA
GGGCCAACTGGTTGTTAGTTTCTTCAAGAGTAAAAGACATCGTGCGGTAT
CCAGACAAGTTACGCCGTGAGCGAGTTACGTGGGACTCATACTTAGTCGA
ACTTAACATGAACCGTCGAAAAGCGACACGTAATAAGTATGTGGCAGGAG
TTTTACGAGCACGTGCTAATTGGATGCTTGTACGTTCAAGAATCCCTGAC
ATTATTCTGTACGGAAAGTACCGACGGTATTCTAAGAAAGAACTCCCTGA
ATCTCGTCATGCCTCTCCTGTTAAAACCAAAAGCAAACCTCTTAAAAGGA
GCGAGAGTGATCGAGTACGTTCTCGGCGGACCGAAAAACCAATCGTCGGA
ACCGACAAATTGCAGCGAAGTTCGACAAAGCACCGTAACAATGACGACGA
AAAGCGTCGAAAACATCATCAGCATCGTTCGACCAAAATCAAATCGCCGC
GGCACAGTCGTAAAGGAGCCACCCAAATCGCTCTCGAAAACTGGAGTAAA
CTCGTCCAAAATACGCAACAAGCAGTCAAAAGAACGCCCTCTACGAAATC
GAAATCAAATAAAGAGGTTTATAAAAGTTGGGACGATTTGATTCAACGAA
CTTCCACTTCAGACAAGAAGAAAAAGGTTCACCGCTCTTCTTCCACAAGA
CGAAAACAAAACGCCTTGAACAACTGGGATAACCTCACCGCGCATACCAA
TACAAAAGACCAACAGAAATCGAAAGAAGCTCTTGATAATTGGGATCAGC
TTGTTAAAAAGACAAAAGGAACTAATGTTCAACGTTCAACCTCATTGAAA
TCAAAAGGAGAAGCACCGCATAAAAATTGGGATATTTTGATACAGAATAC
CTCTCGTGAGATCAAACAACGATCATCCCTACGATCAAAAGACGCGTTCA
TGAATTGGGATAATTTACTACGAAGcaaaaatacagaccagaagaAAAGC
TTAGAAAACTGGGATCATCTTATTGTGGGCACTTCAACTTTATCTTCGCC
GCGTCGTGCTAAGAGTGTTGAAAGGCTCTCTCGCAGGTCACAATCTGAGC
AGCATTGGCATGACTTGTTTGACTCCGCCAAACGTGAAAAGAGGGATGCA
GACGGAAACTGGCATCGGTTGACAGGTAATGCACATTATGAAAAAGAAGC
TGCTGACCGCAACTGGGGTCATCTTGTACATTCTACAAAAACTCCTCCCA
AGTCATCAAATCGTGCAAAGAAAGGTTGGGATAAAATCAGGACCAGTCTT
GGACGAAATTTGACTCATAAAGCGGATAAAGGACAACCTGTGATGAGTCA
AGCACAAGAAGATCGCGCCTACAAAAATTGGTGGACTTTGATCTCGACAG
ATGAAGATTCGAAAAGACCGGCAGCCAAAGAAGATATCAGAGACAAAGCT
GTATGTAAAACTACTGAAGATCTTGTTTGCACTTCTCAGGCTAACGACAC
AGAGGCTACTGCTTGTCAAAATTGGAATTCTTTAATCAAAGGCACGGACA
CGTCAGATGTTGAGAGAACGAACAAAAAAGCGCTGGAAGATTGGTACCAA
CTTATATCAAGAACCGAGGTGGAATCTGTCAACAAAGATGAAGCCATAAA
CAACTGGCATAACTTGATTCGGATGGTAAGCACAACTAACGAAGAAGCAG
AACAGAATTGGCACCAACTGATCCAATCTGTTCAACCGACAGCTGACATG
TCTACGGAAGCCGAAAATCATTGGCATAATTTGATCAAAGCTAAGAAAAC
GGGACCAATGTATAACTCAGAAAAGGCGCTTTATCATTGGGATAAATTAA
TTGAAGGGCGCATTATTCGACGTACAGCTTCACAAACGCCCTCTTCCTCA
ATGAGCACCCGTGATGGAGTGATGGACAGCTTACGTAAACATCCTTCCAA
AGACGGTACCTTTAAAAAGGTATCAGACACTCCTCCGTCTGGCTTCCGTT
TATTATACGACAAAAACCAAGCACAATCTACCGGAAACCACGAACCAAAA
GTCATGCGCTTGAACATCAGAAATGATTTCGGACAATTCAATGACGTCAG
ACTTAAGATGACGTCACCGAACAAAAGCATGCTTTCTGCGCATCTGAAGG
AGAACACTGATGGAACTTTTACGATTTTCTGTTGTCCGAGTATTGATGAA
CCTTTCAATATTTGTGTCTCACTCGGCGGCTCACAGTTTGAGAACGATGT
CCAAGTATTAACTTTAAAAGGAGATCTTTCCCTCCTCAAGACTCAAGTTG
CAACTAGACTAGCATGCAAGACGATCAGTTTGATTCGTTGGCACTTAACT
CCCGGTTTACTTTCAAAACAAGGGGAGAAAATCGTGGCTGGGAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009240XLOC_009240Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016536-proteinTCONS_00016536-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016536-exon-sc0000241-1491911889:234246..235963TCONS_00016536-exon-sc0000241-1491911889:234246..235963Clytia hemisphaericaexon
TCONS_00016536-exon-sc0000241-1510915933:234246..235963TCONS_00016536-exon-sc0000241-1510915933:234246..235963Clytia hemisphaericaexon
TCONS_00016536-exon-sc0000241-1575043694:234246..235963TCONS_00016536-exon-sc0000241-1575043694:234246..235963Clytia hemisphaericaexon
TCONS_00016536-exon-sc0000241-1491911889:236268..237176TCONS_00016536-exon-sc0000241-1491911889:236268..237176Clytia hemisphaericaexon
TCONS_00016536-exon-sc0000241-1510915933:236268..237176TCONS_00016536-exon-sc0000241-1510915933:236268..237176Clytia hemisphaericaexon
TCONS_00016536-exon-sc0000241-1575043694:236268..237176TCONS_00016536-exon-sc0000241-1575043694:236268..237176Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000241supercontigsc0000241:234246..237176 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.100155 0 0.016253 0 0 0.681086 2.26998 0.93922 0.271263 0.471876 0.322934 5.87449 4.62057 3.5435 8.97217 2.22953 2.84761 0 0 3.89301 3.92362 1.88418 1.68987 2.48287 4.16386 0.603561 0.0800034 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016536 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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