|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016582 ID=TCONS_00016582|Name=TCONS_00016582|organism=Clytia hemisphaerica|type=transcript|length=1813bp
GACAGATCATTCTTGCTGGCGATCCATACCAACTAGGCCCTGTACTGCGC
TCCGACATATCACAAGATTATGGGCTAAATATATCTCTATTGGAAAGACT
GTGCAATTCACCGTTATACCAACGTGATGAAGAGACGTACAAAGATAGCG
GATGTTATAATCCTTTACTTGTCACAAAACTTATCAATAACTACAGATCT
CACTCGAGCCTGTTACACCTCCCATCGTCGCTGTTCTATCACCATGAACT
TGTTGCACATGCTGAGGACAGTTTAGTTAAACATTTTGAAGGATCAAGAC
TTTTACCGAATCCTAAAGTTCCCTTTATCTTCCATGGCGTTCGTGCAGAA
GATTTCCGTGAAGGAGACAGCCCATCATGGTTCAATCCAGCAGAAGCTGT
CGAAGTTATCAAATACGTTCAAACCATCATGAGAATATACCCGAATCGGT
TTGATGTATCCGATATCGGGATTATTACACCGTATCGGAAACAGGTTGAA
AAGATACGAGTGTTGTTGGATCGATTTGATTTGTCAGCCATCAAAGTTGG
TTCGGTCGAAGAATTTCAGGGTCAAGAACGGCAAATTATTATCATTTCTA
CCGTCCGATCAACCGAAGATTTTGTGGCATTTGATTGCCGACACAACATC
GGGTTTTTAAGTAATCCGAAACGGTTTAATGTATCCATCACACGTGCTCA
ATCTCTAATGGTCATTGTTGGAAACCCCATTGTGCTTTGTTATGATGCTT
ACTGGTGTGCCATCATACAATATGCAGTGTTGAATGATTGTTATAAAGGA
TGCAATCTCCCCCCTCTTGATAATGACATCGTTAAGgaaaatttcCAGAA
AGCCTTGGTAATGCTTGATGCGTTCAATGCAGCTGAAACAGAAGAAACTA
ATTCAGGAAATGATGACGacaatgatgaaataaatgtGAGCGAAGGAGAT
GAGAAGAAAGAAAACGTAGGTGAGGATGGAGAAAGAAATGACTTTTCTGA
TAGTGAAGATGACGATGATGTGGTTATTGAATCAGTTGAGGATATGGAAG
AAAAGCAAGAATCATCACTGCAACGTGATCTTCATGATGTGATGTTTGAA
GCCAGTGAGAAACAAGATGAAATCTACTTGAAAGATAATACAATGCAATC
TGAGTCTGGGATCATCATAAACAGTTCTATGTCACAAAgacatcaaaata
aaacatttgagTTTTCTCATGAGAGGTCAAGAAGTGACTCTAATTCGTCA
TCAAAATCATCCAGAAGAACAAATGCGTTGCTGGATTCATTGAATGCATC
TTCCAAGAAATGATTATTTTTCATTGGACTACAGACACGCTCTTGTTTCA
TTATACAGATCGTATTGGACTGCAGATATGTTCCATAGTCCAGGACTATA
AAAGGAAAGGAAACTTTCTTGCCTGTCGTATTTCTTTTAGAAGATTTata
agtttttaattattcaatcaTCTTTTAATCTGAAACTTACAAGTAATGGT
gtgttgttttttcttcaaaaagtcatTTTGAAACATCTTGCTCACCGCGA
GTTTGCCATCCTTACCCAGATTTAGTCCCTTAgttatttcaaaacatttg
attaGCTTTTGAATAAATTGAGATGAACCCTGATGTGATTCTCCTTGGAA
CTAGTATAGTAACGTTGTTAAATGTTTGCTTAGGAGTAGGAGAGAATTTG
TATTTTGTATACTTAAACATCTTTTTAGCTCAAAAATTAAGTATATACAA
TTAGCTAGAcattttattaaagaaaaaagaaaatctatatCTGTGTAATT
CTCAAATGCAAGA Run BLAST on NCBI protein sequence of TCONS_00016582-protein >TCONS_00016582-protein ID=TCONS_00016582-protein|Name=TCONS_00016582-protein|organism=Clytia hemisphaerica|type=polypeptide|length=436bp
QIILAGDPYQLGPVLRSDISQDYGLNISLLERLCNSPLYQRDEETYKDSG
CYNPLLVTKLINNYRSHSSLLHLPSSLFYHHELVAHAEDSLVKHFEGSRL
LPNPKVPFIFHGVRAEDFREGDSPSWFNPAEAVEVIKYVQTIMRIYPNRF
DVSDIGIITPYRKQVEKIRVLLDRFDLSAIKVGSVEEFQGQERQIIIIST
VRSTEDFVAFDCRHNIGFLSNPKRFNVSITRAQSLMVIVGNPIVLCYDAY
WCAIIQYAVLNDCYKGCNLPPLDNDIVKENFQKALVMLDAFNAAETEETN
SGNDDDNDEINVSEGDEKKENVGEDGERNDFSDSEDDDDVVIESVEDMEE
KQESSLQRDLHDVMFEASEKQDEIYLKDNTMQSESGIIINSSMSQRHQNK
TFEFSHERSRSDSNSSSKSSRRTNALLDSLNASSKK Run BLAST on NCBI transcript from alignment at sc0000243:297214..303807+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016582 ID=TCONS_00016582|Name=TCONS_00016582|organism=Clytia hemisphaerica|type=transcript|length=6594bp|location=Sequence derived from alignment at sc0000243:297214..303807+ (Clytia hemisphaerica)
GACAGATCATTCTTGCTGGCGATCCATACCAACTAGGCCCTGTACTGCGC
TCCGACATATCACAAGATTATGGGCTAAATATATCTCTATTGGAAAGACT
GTGCAATTCACCGTTATACCAACGTGATGAAGAGACGTACAAAGATAGCG
GATGTTATAATCCTTTACTTGTCACAAAACTTATCAATAACTACAGGTGT
GCACATGCTTTAGCTTTTCAGAATACTGCCCTATAAAGATATCTTAAAAG
GCCCAATATGTGTGGCAAAACTTGTCCAGAAAAGTCCGGAGAAATGACTT
TTACCACCCGATCAATTTCAAAGGAGTACAAATTCTTGGCGATATATGGA
ATTGGGTCAGACGTGTTTCTTTGAAATGCATATTGCCAGTAAGTCCAGCC
ACGTAAATTGGGTTGGAGCTTGAAAAGCAAAAAGTGGTCACATTTAAACT
TTTCTGCCTATTACCGGGTGAATTTTTTCCGACCttgtttctttcatttt
gtaACGTACATTGCTTGATGACCCGGGGGCACTCGATtcgaaaacgaccg
tacgtccaaaaattatacaaaaattctACATCTtcagagtgcaatttttc
tcatctttgctgatttcgtcccttacagtgcattttgggaagcttggaaa
aaataCGTATATAGGTCGCATGTACAGTAGGTCATTAAGcctgagtgccc
cccccccccggcttgATGATCAGTTaacaaaattatattcattCTTTAGA
TCTCACTCGAGCCTGTTACACCTCCCATCGTCGCTGTTCTATCACCATGA
ACTTGTTGCACATGCTGAGGACAGTTTAGTTAAACATTTTGAAGGATCAA
GACTTTTACCGAATCCTAAAGTTCCCTTTATCTTCCATGGCGTTCGTGTA
AGTTGTTCTGTCATCGTATACTTCATAAACGtcgcagattttttttcaaa
tattttactttttagaaGGGACGTTTGAAAGAAGGGGACGTTTATTAAAG
AATTTATAGGCAAAGCCACTTTAATAAAGTATATGGGAGCCTCATTTTGC
CTTTTCATTATTGTTGAAATACAAATATGTTAACTTGGGGgagtttattt
gagggggcgtttattggacctaccacggtggggtagaggtcctataaatt
aactgacgttcgttcgttcgttcgttagctcattagtttttcctgatttt
ttgcacaaagatgcgacatagcaatgcccaaaacatgcccgagtccgatt
tttgagaaaaattcttttccggctgaaaatgctgGAAGTATGCCGGAAAT
CTAGACATCGAAAACTGACAAactataccatttttggatactactaattc
agggctatccagctgtgagaatgattttttctgaaaatgctacTTTGATT
AAgaccttgataagttctatcgattaactaaaagtCGATTCACTCAAAAA
CTGCAGGATATTCGAAGggctttttttttgtcaattctacaccctattag
gggtataatatcaaaaaaatgtcccctgatctaaggggtgcctaCGAAGT
GGgacaattcactacctcggccgctgggcccggttgttcaaaagtggatt
agcgGCCGATTAGCTTAATTTTCGATTAAATCTCGATTAGCGCCGATTAA
CGCAGAACCGTCGGTTGTTCGAAAaaaattaggcttaaatctgGATTAAA
TCCCGATTAAATTGGCCAAATTTTAATCCTGCTCTGACCCAGGATTAACG
AGGATTAAGAagcttttttctacaaaaaaggtgaagtcgctgcattgaGG
TGAtaaattcgaacgaaaaaagcttttcgaatgttttggaaacGTTCGAA
ATGTGACGTCAGGATTAAGATCTCTGAAAACACAGGCAAAAAGTCCACGA
TTAGTTAATCTGACGTTCGAACAACGGAAGTTAATCGCCGGGATTAACTA
ATCGAAATCTAATCGCGATTAGTGGTAATCGGGACTTAATCTAATCGACC
TTTGAACAACCGGTCCCTGGTTTATAATCACGAACTGTAACCACGAGTTT
TAGTATCAACAACAAATGATAAACCGAAGACTTTATTATCAATCTGAAAA
CCTACGTTATTGGCTGCAGACAATGTATTTTATGGTTTAAATTTTACAGG
CAGAAGATTTCCGTGAAGGAGACAGCCCATCATGGTTCAATCCAGCAGAA
GCTGTCGAAGTTATCAAATACGTTCAAACCATCATGAGAATATACCCGAA
TCGGTTTGATGTATCCGATATCGGGATTATTACACCGTATCGGAAACAGG
TAAAATGACATGGCAAAGAAAAGACTACTTTACGATGAGATTTTGAACAC
TTGAATATAAACTGTGACCACCAAATGAATTTTCGATTGATAATAGGTGG
ACCTGGGTAAaaatccttttgaaaaaaactatgGAAAAAGTAAGGCAATG
ATAACAATAACAATGTGTTTGAAAATCTATTAACTTTTTAATGGACCCTT
GATCAACATTGTCAGTCTAAGGGGACATCATTTTCACACGACTAGTTATC
ATGGCGCTTGCCGTGGGTTTTTCAAACGAGTCTTAATGGCCTCTCCCCTA
AGTTACCCATACATAACCGATCGTGTTCACATCACTCCTTTCAAATCATT
TGACTTCCAGGTTGAAAAGATACGAGTGTTGTTGGATCGATTTGATTTGT
CAGCCATCAAAGTTGGTTCGGTCGAAGAATTTCAGGGTCAAGAACGGCAA
ATTATTATCATTTCTACCGTAAGCATAATTCATACTCTAATTCTTATCAT
ATCACTAATTCTAAGTCCTTGTTGTCGAGCCAAAATGGTAACGTCtagtt
agaaaaaataattactCTACTGATATTTCTGAGGTAAAACGAACCAAAGA
GTAGTCTATAAAGTTCTTTCGTCTCAGCGAGGTACAAGAAGAATAGTCtc
taaattcaacaaaatcctGCAAAACTCGAAGAATCTTGTCTTGTTTGTTT
GAGACTGTTTCCGACTTTCCGACGATTTTGCCACTGAAACCACTGAAAGG
GAAAATCGAACCATATTCAAGTCCTACTACGATTTGGTCGCTCAATCCTT
CAGCAGCTTCAAGTAAAAGAAACGAACATGAAACGACTTCCTTTACTTTC
AAGCTCACGATACCAATCTCGCATAATTTTCAATTgcatttatctttttt
tttaattcatcgTTATTTTCATTTCAAGGTCCGATCAACCGAAGATTTTG
TGGCATTTGATTGCCGACACAACATCGGGTTTTTAAGTAATCCGAAACGG
TTTAATGTATCCATCACACGTGCTCAATCTCTAATGGTCATTGTTGGAAA
CCCCATTGTGCTTTGTTATGTAAGTTTGATGATTTGATTacatggttttg
tttttaataaatgagctgatatatttattttcatttgacGTTTGCAGGCA
AATATCCTTACCCTAATAATTAGTAAAAAAATGACGAATTTTCAAAAGGG
ACTTAGTTCTGGTTTAAACGGCCTGTCGCCCTGCTTATTCTGATTGTGaa
ttaaatttggcagaaattggctgtctaaagtcaatgcattgccctctttt
gacgtcaatgtaatgattttttaataatttcaagcaaagattttgcCTGC
CAACTTTCTACCCACtttaacaattagaatagaaaGGGCAGAAAGTTGGC
CATTTAAACTAAAGCTACAttaaaaatctcttttttttgtATACAGGATG
CTTACTGGTGTGCCATCATACAATATGCAGTGTTGAATGATTGTTATAAA
GGATGCAATCTCCCCCCTCTTGATAATGACATCGTTAAGGTAAGTAAGAT
GCATTAACACCTTTTTCCCTCGTTCATGAAAATTAGACTCGTTCAATTCT
TTAGTGTGACCTAGCTACTGTTGTGGGTCGTGACGCTCGTTTGCACCGAC
TAATTACACTTTCAAGAGTGATCATGATTTTCGAACGCTTTATTGTTTAA
CCTGAAGAAAAAATCGTTCGGGCTCaaccgggattcgaacccggggcctc
tcgcacccaaagcgagaatcataccactagaccattgagccacaCTTACT
GAAGGTAGAAATATCCATTTTGTATTGTTTCAAGATTTAAATTTGTGTTT
AAAGTTGAGCGTTCCTCTTTAACAAAACAGTTGTTCGAATGTTCGAAAAT
TAACAATCCTTCagcatgattttttttcattaaaagacACGAACTGTTAA
TCTAGTTAATTTAGCACGATTTTATTCGGCTAAATTGAAATTACACTAAA
AGAAATTTAACGATAAAggattttctgaaaatctttttaatatTATTTGT
CAAGACTCTTTGAAGATTTTAACAATTAGGATTGTTCTATCAGGGTTTGC
TAACAGCTCTAGTAGGCTCTCCAGCCAAAANCATTTAACATTTGGGATTG
TTCTATCAGGGTTTGCTAACAGCTCTAGTAGGCTCGCCAGccaaaatcaa
attaaattcaagAAGTTTCATTAATTTTGTTGGTTTAGTTTGATTACTAT
CTTTCCTGTTTCAAAAGACAAATAATTGGACTGGTTTCCGCCTTTCCCAG
CTATTAAGTCAAACTGTCATTAGAGTTTTTTTTCCTGTTCATGACGACGA
GGTCACGATTTcagctttttatttctttaagaATTTCAACGTTCACTATC
AAAAACGTtttgtttaaaggttttgtttaaaaagttaAGTATTTTTCTGC
ATTTCTTCTAAATTCGAGCTTGCGTTTTATTAAACGTAAACGTTCGAAAC
AACAAACAAATTAGCGTCgggaacaaatataaaatagatACTTTTGCCCA
TATTAAGtgtggctcaatggtctagtggtatgattctcgctttgggtgcg
agaggccccgggttcgaatcccggttGAGCCCGAATGTTTTTTCACGGTT
ATCGAATGTTTCACATTACTGTAGGTGATGAGATTCTCACATTTCAGACA
ATAATATGCTAcaattgttttactttttttacatCAGTTCTTGTGAAAAG
TCTTTCTTACATTGTTATACGAGATTCTGCATAATATCCCACTGTatttt
tttccaggaaaatttcCAGAAAGCCTTGGTAATGCTTGATGCGTTCAATG
CAGCTGAAACAGAAGAAACTAATTCAGGAAATGATGACGacaatgatgaa
ataaatgtGAGCGAAGGAGATGAGAAGAAAGAAAACGTAGGTGAGGATGG
AGAAAGAAATGACTTTTCTGATAGTGAAGATGACGATGATGTGGTTATTG
AATCAGTTGAGGATATGGAAGAAAAGCAAGAATCATCACTGCAACGTGAT
CTTCATGATGTGATGTTTGAAGCCAGTGAGGTATAAAAGTGCATGAAATA
CTTTTattgttgaaaatttcaattgtgTTCTAGTTGGTTTTGAATTATTT
TACTTACtaaaattgattaatttgaaCAGTCAAAAGTCAAGGTTCAGTGT
GTCTCGGTCATTCGAACCCAGTAACGTCGTTCGTCATTTGCACAAGTATT
ATGCAGAAGACTCAATTCCCtttcgaatatttctttttatccCCTTCATA
TATGAGAACTACCATTATTTGATACCACTTTTGAAGCATCCTTCCTCTAG
AACTTATGTTTGACTTCCAGCgagccaaaaaaaaacatagtgTAGTTTAA
CACGACCTTGTTAGAACTTATAAGCCTACGTCTAGCTTTGAAATAGTCAA
GCTTCGTCTACGCTATTGACAATACCAGTTGTGTCCCGGGCGTATgagct
taaaaatcaatttagaCTGGAATCCATACTAAAAAGAATGCAGATTTGCA
TCAGCAAGCTACTATAAGATTTACTAAATCTATATTCAAGAAACAAGATG
AAATCTACTTGAAAGATAATACAATGCAATCTGAGTCTGGGATCATCATA
AACAGTTCTATGTCACAAAgacatcaaaataaaacatttgagTTTTCTCA
TGAGAGGTCAAGAAGTGACTCTAATTCGTCATCAAAATCATCCAGAAGAA
CAAATGCGTTGCTGGATTCATTGAATGCATCTTCCAAGAAATGATTATTT
TTCATTGGACTACAGACACGCTCTTGTTTCATTATACAGATCGTATTGGA
CTGCAGATATGTTCCATAGTCCAGGACTATAAAAGGAAAGGAAACTTTCT
TGCCTGTCGTATTTCTTTTAGAAGATTTataagtttttaattattcaatc
aTCTTTTAATCTGAAACTTACAAGTAATGGTgtgttgttttttcttcaaa
aagtcatTTTGAAACATCTTGCTCACCGCGAGTTTGCCATCCTTACCCAG
ATTTAGTCCCTTAgttatttcaaaacatttgattaGCTTTTGAATAAATT
GAGATGAACCCTGATGTGATTCTCCTTGGAACTAGTATAGTAACGTTGTT
AAATGTTTGCTTAGGAGTAGGAGAGAATTTGTATTTTGTATACTTAAACA
TCTTTTTAGCTCAAAAATTAAGTATATACAATTAGCTAGAcattttatta
aagaaaaaagaaaatctatatCTGTGTAATTCTCAAATGCAAGA Coding sequence (CDS) from alignment at sc0000243:297214..303807+ >TCONS_00016582 ID=TCONS_00016582|Name=TCONS_00016582|organism=Clytia hemisphaerica|type=CDS|length=10488bp|location=Sequence derived from alignment at sc0000243:297214..303807+ (Clytia hemisphaerica)
CAGATCATTCTTGCTGGCGATCCATACCAACTAGGCCCTGTACTGCGCTC
CGACATATCACAAGATTATGGGCTAAATATATCTCTATTGGAAAGACTGT
GCAATTCACCGTTATACCAACGTGATGAAGAGACGTACAAAGATAGCGGA
TGTTATAATCCTTTACTTGTCACAAAACTTATCAATAACTACAGATCTCA
CTCGAGCCTGTTACACCTCCCATCGTCGCTGTTCTATCACCATGAACTTG
TTGCACATGCTGAGGACAGTTTAGTTAAACATTTTGAAGGATCAAGACTT
TTACCGAATCCTAAAGTTCCCTTTATCTTCCATGGCGTTCGTGCAGAAGA
TTTCCGTGAAGGAGACAGCCCATCATGGTTCAATCCAGCAGAAGCTGTCG
AAGTTATCAAATACGTTCAAACCATCATGAGAATATACCCGAATCGGTTT
GATGTATCCGATATCGGGATTATTACACCGTATCGGAAACAGGTTGAAAA
GATACGAGTGTTGTTGGATCGATTTGATTTGTCAGCCATCAAAGTTGGTT
CGGTCGAAGAATTTCAGGGTCAAGAACGGCAAATTATTATCATTTCTACC
GTCCGATCAACCGAAGATTTTGTGGCATTTGATTGCCGACACAACATCGG
GTTTTTAAGTAATCCGAAACGGTTTAATGTATCCATCACACGTGCTCAAT
CTCTAATGGTCATTGTTGGAAACCCCATTGTGCTTTGTTATGATGCTTAC
TGGTGTGCCATCATACAATATGCAGTGTTGAATGATTGTTATAAAGGATG
CAATCTCCCCCCTCTTGATAATGACATCGTTAAGgaaaatttcCAGAAAG
CCTTGGTAATGCTTGATGCGTTCAATGCAGCTGAAACAGAAGAAACTAAT
TCAGGAAATGATGACGacaatgatgaaataaatgtGAGCGAAGGAGATGA
GAAGAAAGAAAACGTAGGTGAGGATGGAGAAAGAAATGACTTTTCTGATA
GTGAAGATGACGATGATGTGGTTATTGAATCAGTTGAGGATATGGAAGAA
AAGCAAGAATCATCACTGCAACGTGATCTTCATGATGTGATGTTTGAAGC
CAGTGAGAAACAAGATGAAATCTACTTGAAAGATAATACAATGCAATCTG
AGTCTGGGATCATCATAAACAGTTCTATGTCACAAAgacatcaaaataaa
acatttgagTTTTCTCATGAGAGGTCAAGAAGTGACTCTAATTCGTCATC
AAAATCATCCAGAAGAACAAATGCGTTGCTGGATTCATTGAATGCATCTT
CCAAGAAATGACAGATCATTCTTGCTGGCGATCCATACCAACTAGGCCCT
GTACTGCGCTCCGACATATCACAAGATTATGGGCTAAATATATCTCTATT
GGAAAGACTGTGCAATTCACCGTTATACCAACGTGATGAAGAGACGTACA
AAGATAGCGGATGTTATAATCCTTTACTTGTCACAAAACTTATCAATAAC
TACAGATCTCACTCGAGCCTGTTACACCTCCCATCGTCGCTGTTCTATCA
CCATGAACTTGTTGCACATGCTGAGGACAGTTTAGTTAAACATTTTGAAG
GATCAAGACTTTTACCGAATCCTAAAGTTCCCTTTATCTTCCATGGCGTT
CGTGCAGAAGATTTCCGTGAAGGAGACAGCCCATCATGGTTCAATCCAGC
AGAAGCTGTCGAAGTTATCAAATACGTTCAAACCATCATGAGAATATACC
CGAATCGGTTTGATGTATCCGATATCGGGATTATTACACCGTATCGGAAA
CAGGTTGAAAAGATACGAGTGTTGTTGGATCGATTTGATTTGTCAGCCAT
CAAAGTTGGTTCGGTCGAAGAATTTCAGGGTCAAGAACGGCAAATTATTA
TCATTTCTACCGTCCGATCAACCGAAGATTTTGTGGCATTTGATTGCCGA
CACAACATCGGGTTTTTAAGTAATCCGAAACGGTTTAATGTATCCATCAC
ACGTGCTCAATCTCTAATGGTCATTGTTGGAAACCCCATTGTGCTTTGTT
ATGATGCTTACTGGTGTGCCATCATACAATATGCAGTGTTGAATGATTGT
TATAAAGGATGCAATCTCCCCCCTCTTGATAATGACATCGTTAAGgaaaa
tttcCAGAAAGCCTTGGTAATGCTTGATGCGTTCAATGCAGCTGAAACAG
AAGAAACTAATTCAGGAAATGATGACGacaatgatgaaataaatgtGAGC
GAAGGAGATGAGAAGAAAGAAAACGTAGGTGAGGATGGAGAAAGAAATGA
CTTTTCTGATAGTGAAGATGACGATGATGTGGTTATTGAATCAGTTGAGG
ATATGGAAGAAAAGCAAGAATCATCACTGCAACGTGATCTTCATGATGTG
ATGTTTGAAGCCAGTGAGAAACAAGATGAAATCTACTTGAAAGATAATAC
AATGCAATCTGAGTCTGGGATCATCATAAACAGTTCTATGTCACAAAgac
atcaaaataaaacatttgagTTTTCTCATGAGAGGTCAAGAAGTGACTCT
AATTCGTCATCAAAATCATCCAGAAGAACAAATGCGTTGCTGGATTCATT
GAATGCATCTTCCAAGAAATGACAGATCATTCTTGCTGGCGATCCATACC
AACTAGGCCCTGTACTGCGCTCCGACATATCACAAGATTATGGGCTAAAT
ATATCTCTATTGGAAAGACTGTGCAATTCACCGTTATACCAACGTGATGA
AGAGACGTACAAAGATAGCGGATGTTATAATCCTTTACTTGTCACAAAAC
TTATCAATAACTACAGATCTCACTCGAGCCTGTTACACCTCCCATCGTCG
CTGTTCTATCACCATGAACTTGTTGCACATGCTGAGGACAGTTTAGTTAA
ACATTTTGAAGGATCAAGACTTTTACCGAATCCTAAAGTTCCCTTTATCT
TCCATGGCGTTCGTGCAGAAGATTTCCGTGAAGGAGACAGCCCATCATGG
TTCAATCCAGCAGAAGCTGTCGAAGTTATCAAATACGTTCAAACCATCAT
GAGAATATACCCGAATCGGTTTGATGTATCCGATATCGGGATTATTACAC
CGTATCGGAAACAGGTTGAAAAGATACGAGTGTTGTTGGATCGATTTGAT
TTGTCAGCCATCAAAGTTGGTTCGGTCGAAGAATTTCAGGGTCAAGAACG
GCAAATTATTATCATTTCTACCGTCCGATCAACCGAAGATTTTGTGGCAT
TTGATTGCCGACACAACATCGGGTTTTTAAGTAATCCGAAACGGTTTAAT
GTATCCATCACACGTGCTCAATCTCTAATGGTCATTGTTGGAAACCCCAT
TGTGCTTTGTTATGATGCTTACTGGTGTGCCATCATACAATATGCAGTGT
TGAATGATTGTTATAAAGGATGCAATCTCCCCCCTCTTGATAATGACATC
GTTAAGgaaaatttcCAGAAAGCCTTGGTAATGCTTGATGCGTTCAATGC
AGCTGAAACAGAAGAAACTAATTCAGGAAATGATGACGacaatgatgaaa
taaatgtGAGCGAAGGAGATGAGAAGAAAGAAAACGTAGGTGAGGATGGA
GAAAGAAATGACTTTTCTGATAGTGAAGATGACGATGATGTGGTTATTGA
ATCAGTTGAGGATATGGAAGAAAAGCAAGAATCATCACTGCAACGTGATC
TTCATGATGTGATGTTTGAAGCCAGTGAGAAACAAGATGAAATCTACTTG
AAAGATAATACAATGCAATCTGAGTCTGGGATCATCATAAACAGTTCTAT
GTCACAAAgacatcaaaataaaacatttgagTTTTCTCATGAGAGGTCAA
GAAGTGACTCTAATTCGTCATCAAAATCATCCAGAAGAACAAATGCGTTG
CTGGATTCATTGAATGCATCTTCCAAGAAATGACAGATCATTCTTGCTGG
CGATCCATACCAACTAGGCCCTGTACTGCGCTCCGACATATCACAAGATT
ATGGGCTAAATATATCTCTATTGGAAAGACTGTGCAATTCACCGTTATAC
CAACGTGATGAAGAGACGTACAAAGATAGCGGATGTTATAATCCTTTACT
TGTCACAAAACTTATCAATAACTACAGATCTCACTCGAGCCTGTTACACC
TCCCATCGTCGCTGTTCTATCACCATGAACTTGTTGCACATGCTGAGGAC
AGTTTAGTTAAACATTTTGAAGGATCAAGACTTTTACCGAATCCTAAAGT
TCCCTTTATCTTCCATGGCGTTCGTGCAGAAGATTTCCGTGAAGGAGACA
GCCCATCATGGTTCAATCCAGCAGAAGCTGTCGAAGTTATCAAATACGTT
CAAACCATCATGAGAATATACCCGAATCGGTTTGATGTATCCGATATCGG
GATTATTACACCGTATCGGAAACAGGTTGAAAAGATACGAGTGTTGTTGG
ATCGATTTGATTTGTCAGCCATCAAAGTTGGTTCGGTCGAAGAATTTCAG
GGTCAAGAACGGCAAATTATTATCATTTCTACCGTCCGATCAACCGAAGA
TTTTGTGGCATTTGATTGCCGACACAACATCGGGTTTTTAAGTAATCCGA
AACGGTTTAATGTATCCATCACACGTGCTCAATCTCTAATGGTCATTGTT
GGAAACCCCATTGTGCTTTGTTATGATGCTTACTGGTGTGCCATCATACA
ATATGCAGTGTTGAATGATTGTTATAAAGGATGCAATCTCCCCCCTCTTG
ATAATGACATCGTTAAGgaaaatttcCAGAAAGCCTTGGTAATGCTTGAT
GCGTTCAATGCAGCTGAAACAGAAGAAACTAATTCAGGAAATGATGACGa
caatgatgaaataaatgtGAGCGAAGGAGATGAGAAGAAAGAAAACGTAG
GTGAGGATGGAGAAAGAAATGACTTTTCTGATAGTGAAGATGACGATGAT
GTGGTTATTGAATCAGTTGAGGATATGGAAGAAAAGCAAGAATCATCACT
GCAACGTGATCTTCATGATGTGATGTTTGAAGCCAGTGAGAAACAAGATG
AAATCTACTTGAAAGATAATACAATGCAATCTGAGTCTGGGATCATCATA
AACAGTTCTATGTCACAAAgacatcaaaataaaacatttgagTTTTCTCA
TGAGAGGTCAAGAAGTGACTCTAATTCGTCATCAAAATCATCCAGAAGAA
CAAATGCGTTGCTGGATTCATTGAATGCATCTTCCAAGAAATGACAGATC
ATTCTTGCTGGCGATCCATACCAACTAGGCCCTGTACTGCGCTCCGACAT
ATCACAAGATTATGGGCTAAATATATCTCTATTGGAAAGACTGTGCAATT
CACCGTTATACCAACGTGATGAAGAGACGTACAAAGATAGCGGATGTTAT
AATCCTTTACTTGTCACAAAACTTATCAATAACTACAGATCTCACTCGAG
CCTGTTACACCTCCCATCGTCGCTGTTCTATCACCATGAACTTGTTGCAC
ATGCTGAGGACAGTTTAGTTAAACATTTTGAAGGATCAAGACTTTTACCG
AATCCTAAAGTTCCCTTTATCTTCCATGGCGTTCGTGCAGAAGATTTCCG
TGAAGGAGACAGCCCATCATGGTTCAATCCAGCAGAAGCTGTCGAAGTTA
TCAAATACGTTCAAACCATCATGAGAATATACCCGAATCGGTTTGATGTA
TCCGATATCGGGATTATTACACCGTATCGGAAACAGGTTGAAAAGATACG
AGTGTTGTTGGATCGATTTGATTTGTCAGCCATCAAAGTTGGTTCGGTCG
AAGAATTTCAGGGTCAAGAACGGCAAATTATTATCATTTCTACCGTCCGA
TCAACCGAAGATTTTGTGGCATTTGATTGCCGACACAACATCGGGTTTTT
AAGTAATCCGAAACGGTTTAATGTATCCATCACACGTGCTCAATCTCTAA
TGGTCATTGTTGGAAACCCCATTGTGCTTTGTTATGATGCTTACTGGTGT
GCCATCATACAATATGCAGTGTTGAATGATTGTTATAAAGGATGCAATCT
CCCCCCTCTTGATAATGACATCGTTAAGgaaaatttcCAGAAAGCCTTGG
TAATGCTTGATGCGTTCAATGCAGCTGAAACAGAAGAAACTAATTCAGGA
AATGATGACGacaatgatgaaataaatgtGAGCGAAGGAGATGAGAAGAA
AGAAAACGTAGGTGAGGATGGAGAAAGAAATGACTTTTCTGATAGTGAAG
ATGACGATGATGTGGTTATTGAATCAGTTGAGGATATGGAAGAAAAGCAA
GAATCATCACTGCAACGTGATCTTCATGATGTGATGTTTGAAGCCAGTGA
GAAACAAGATGAAATCTACTTGAAAGATAATACAATGCAATCTGAGTCTG
GGATCATCATAAACAGTTCTATGTCACAAAgacatcaaaataaaacattt
gagTTTTCTCATGAGAGGTCAAGAAGTGACTCTAATTCGTCATCAAAATC
ATCCAGAAGAACAAATGCGTTGCTGGATTCATTGAATGCATCTTCCAAGA
AATGACAGATCATTCTTGCTGGCGATCCATACCAACTAGGCCCTGTACTG
CGCTCCGACATATCACAAGATTATGGGCTAAATATATCTCTATTGGAAAG
ACTGTGCAATTCACCGTTATACCAACGTGATGAAGAGACGTACAAAGATA
GCGGATGTTATAATCCTTTACTTGTCACAAAACTTATCAATAACTACAGA
TCTCACTCGAGCCTGTTACACCTCCCATCGTCGCTGTTCTATCACCATGA
ACTTGTTGCACATGCTGAGGACAGTTTAGTTAAACATTTTGAAGGATCAA
GACTTTTACCGAATCCTAAAGTTCCCTTTATCTTCCATGGCGTTCGTGCA
GAAGATTTCCGTGAAGGAGACAGCCCATCATGGTTCAATCCAGCAGAAGC
TGTCGAAGTTATCAAATACGTTCAAACCATCATGAGAATATACCCGAATC
GGTTTGATGTATCCGATATCGGGATTATTACACCGTATCGGAAACAGGTT
GAAAAGATACGAGTGTTGTTGGATCGATTTGATTTGTCAGCCATCAAAGT
TGGTTCGGTCGAAGAATTTCAGGGTCAAGAACGGCAAATTATTATCATTT
CTACCGTCCGATCAACCGAAGATTTTGTGGCATTTGATTGCCGACACAAC
ATCGGGTTTTTAAGTAATCCGAAACGGTTTAATGTATCCATCACACGTGC
TCAATCTCTAATGGTCATTGTTGGAAACCCCATTGTGCTTTGTTATGATG
CTTACTGGTGTGCCATCATACAATATGCAGTGTTGAATGATTGTTATAAA
GGATGCAATCTCCCCCCTCTTGATAATGACATCGTTAAGgaaaatttcCA
GAAAGCCTTGGTAATGCTTGATGCGTTCAATGCAGCTGAAACAGAAGAAA
CTAATTCAGGAAATGATGACGacaatgatgaaataaatgtGAGCGAAGGA
GATGAGAAGAAAGAAAACGTAGGTGAGGATGGAGAAAGAAATGACTTTTC
TGATAGTGAAGATGACGATGATGTGGTTATTGAATCAGTTGAGGATATGG
AAGAAAAGCAAGAATCATCACTGCAACGTGATCTTCATGATGTGATGTTT
GAAGCCAGTGAGAAACAAGATGAAATCTACTTGAAAGATAATACAATGCA
ATCTGAGTCTGGGATCATCATAAACAGTTCTATGTCACAAAgacatcaaa
ataaaacatttgagTTTTCTCATGAGAGGTCAAGAAGTGACTCTAATTCG
TCATCAAAATCATCCAGAAGAACAAATGCGTTGCTGGATTCATTGAATGC
ATCTTCCAAGAAATGACAGATCATTCTTGCTGGCGATCCATACCAACTAG
GCCCTGTACTGCGCTCCGACATATCACAAGATTATGGGCTAAATATATCT
CTATTGGAAAGACTGTGCAATTCACCGTTATACCAACGTGATGAAGAGAC
GTACAAAGATAGCGGATGTTATAATCCTTTACTTGTCACAAAACTTATCA
ATAACTACAGATCTCACTCGAGCCTGTTACACCTCCCATCGTCGCTGTTC
TATCACCATGAACTTGTTGCACATGCTGAGGACAGTTTAGTTAAACATTT
TGAAGGATCAAGACTTTTACCGAATCCTAAAGTTCCCTTTATCTTCCATG
GCGTTCGTGCAGAAGATTTCCGTGAAGGAGACAGCCCATCATGGTTCAAT
CCAGCAGAAGCTGTCGAAGTTATCAAATACGTTCAAACCATCATGAGAAT
ATACCCGAATCGGTTTGATGTATCCGATATCGGGATTATTACACCGTATC
GGAAACAGGTTGAAAAGATACGAGTGTTGTTGGATCGATTTGATTTGTCA
GCCATCAAAGTTGGTTCGGTCGAAGAATTTCAGGGTCAAGAACGGCAAAT
TATTATCATTTCTACCGTCCGATCAACCGAAGATTTTGTGGCATTTGATT
GCCGACACAACATCGGGTTTTTAAGTAATCCGAAACGGTTTAATGTATCC
ATCACACGTGCTCAATCTCTAATGGTCATTGTTGGAAACCCCATTGTGCT
TTGTTATGATGCTTACTGGTGTGCCATCATACAATATGCAGTGTTGAATG
ATTGTTATAAAGGATGCAATCTCCCCCCTCTTGATAATGACATCGTTAAG
gaaaatttcCAGAAAGCCTTGGTAATGCTTGATGCGTTCAATGCAGCTGA
AACAGAAGAAACTAATTCAGGAAATGATGACGacaatgatgaaataaatg
tGAGCGAAGGAGATGAGAAGAAAGAAAACGTAGGTGAGGATGGAGAAAGA
AATGACTTTTCTGATAGTGAAGATGACGATGATGTGGTTATTGAATCAGT
TGAGGATATGGAAGAAAAGCAAGAATCATCACTGCAACGTGATCTTCATG
ATGTGATGTTTGAAGCCAGTGAGAAACAAGATGAAATCTACTTGAAAGAT
AATACAATGCAATCTGAGTCTGGGATCATCATAAACAGTTCTATGTCACA
AAgacatcaaaataaaacatttgagTTTTCTCATGAGAGGTCAAGAAGTG
ACTCTAATTCGTCATCAAAATCATCCAGAAGAACAAATGCGTTGCTGGAT
TCATTGAATGCATCTTCCAAGAAATGACAGATCATTCTTGCTGGCGATCC
ATACCAACTAGGCCCTGTACTGCGCTCCGACATATCACAAGATTATGGGC
TAAATATATCTCTATTGGAAAGACTGTGCAATTCACCGTTATACCAACGT
GATGAAGAGACGTACAAAGATAGCGGATGTTATAATCCTTTACTTGTCAC
AAAACTTATCAATAACTACAGATCTCACTCGAGCCTGTTACACCTCCCAT
CGTCGCTGTTCTATCACCATGAACTTGTTGCACATGCTGAGGACAGTTTA
GTTAAACATTTTGAAGGATCAAGACTTTTACCGAATCCTAAAGTTCCCTT
TATCTTCCATGGCGTTCGTGCAGAAGATTTCCGTGAAGGAGACAGCCCAT
CATGGTTCAATCCAGCAGAAGCTGTCGAAGTTATCAAATACGTTCAAACC
ATCATGAGAATATACCCGAATCGGTTTGATGTATCCGATATCGGGATTAT
TACACCGTATCGGAAACAGGTTGAAAAGATACGAGTGTTGTTGGATCGAT
TTGATTTGTCAGCCATCAAAGTTGGTTCGGTCGAAGAATTTCAGGGTCAA
GAACGGCAAATTATTATCATTTCTACCGTCCGATCAACCGAAGATTTTGT
GGCATTTGATTGCCGACACAACATCGGGTTTTTAAGTAATCCGAAACGGT
TTAATGTATCCATCACACGTGCTCAATCTCTAATGGTCATTGTTGGAAAC
CCCATTGTGCTTTGTTATGATGCTTACTGGTGTGCCATCATACAATATGC
AGTGTTGAATGATTGTTATAAAGGATGCAATCTCCCCCCTCTTGATAATG
ACATCGTTAAGgaaaatttcCAGAAAGCCTTGGTAATGCTTGATGCGTTC
AATGCAGCTGAAACAGAAGAAACTAATTCAGGAAATGATGACGacaatga
tgaaataaatgtGAGCGAAGGAGATGAGAAGAAAGAAAACGTAGGTGAGG
ATGGAGAAAGAAATGACTTTTCTGATAGTGAAGATGACGATGATGTGGTT
ATTGAATCAGTTGAGGATATGGAAGAAAAGCAAGAATCATCACTGCAACG
TGATCTTCATGATGTGATGTTTGAAGCCAGTGAGAAACAAGATGAAATCT
ACTTGAAAGATAATACAATGCAATCTGAGTCTGGGATCATCATAAACAGT
TCTATGTCACAAAgacatcaaaataaaacatttgagTTTTCTCATGAGAG
GTCAAGAAGTGACTCTAATTCGTCATCAAAATCATCCAGAAGAACAAATG
CGTTGCTGGATTCATTGAATGCATCTTCCAAGAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016582-exon-sc0000243-1491911889:297214..297409 | TCONS_00016582-exon-sc0000243-1491911889:297214..297409 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:297214..297409 | TCONS_00016582-exon-sc0000243-1510915933:297214..297409 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:297214..297409 | TCONS_00016582-exon-sc0000243-1575043694:297214..297409 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1491911889:297963..298110 | TCONS_00016582-exon-sc0000243-1491911889:297963..298110 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:297963..298110 | TCONS_00016582-exon-sc0000243-1510915933:297963..298110 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:297963..298110 | TCONS_00016582-exon-sc0000243-1575043694:297963..298110 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1491911889:299363..299512 | TCONS_00016582-exon-sc0000243-1491911889:299363..299512 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:299363..299512 | TCONS_00016582-exon-sc0000243-1510915933:299363..299512 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:299363..299512 | TCONS_00016582-exon-sc0000243-1575043694:299363..299512 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1491911889:299874..299981 | TCONS_00016582-exon-sc0000243-1491911889:299874..299981 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:299874..299981 | TCONS_00016582-exon-sc0000243-1510915933:299874..299981 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:299874..299981 | TCONS_00016582-exon-sc0000243-1575043694:299874..299981 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1491911889:300442..300582 | TCONS_00016582-exon-sc0000243-1491911889:300442..300582 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:300442..300582 | TCONS_00016582-exon-sc0000243-1510915933:300442..300582 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:300442..300582 | TCONS_00016582-exon-sc0000243-1575043694:300442..300582 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1491911889:300960..301052 | TCONS_00016582-exon-sc0000243-1491911889:300960..301052 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:300960..301052 | TCONS_00016582-exon-sc0000243-1510915933:300960..301052 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:300960..301052 | TCONS_00016582-exon-sc0000243-1575043694:300960..301052 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1491911889:302321..302593 | TCONS_00016582-exon-sc0000243-1491911889:302321..302593 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:302321..302593 | TCONS_00016582-exon-sc0000243-1510915933:302321..302593 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:302321..302593 | TCONS_00016582-exon-sc0000243-1575043694:302321..302593 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1491911889:303104..303807 | TCONS_00016582-exon-sc0000243-1491911889:303104..303807 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1510915933:303104..303807 | TCONS_00016582-exon-sc0000243-1510915933:303104..303807 | Clytia hemisphaerica | exon |
| TCONS_00016582-exon-sc0000243-1575043694:303104..303807 | TCONS_00016582-exon-sc0000243-1575043694:303104..303807 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000243 | supercontig | sc0000243:297214..303807 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027417 | P-loop_NTPase |
Blast
BLAST of TCONS_00016582 vs. Swiss-Prot (Human)
Match: M10L1 (RNA helicase Mov10l1 OS=Homo sapiens GN=MOV10L1 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 3.585e-85 Identity = 155/271 (57.20%), Postives = 195/271 (71.96%), Query Frame = 3
Query: 3 QIILAGDPYQLGPVLRSDISQDYGLNISLLERLCNSPLYQRDEETYKDSGCYNPLLVTKLINNYRXXXXXXXXXXXXXXXXELVAHAEDSLVKHFEGSRLLPNPKVPFIFHGVRAEDFREGDSPSWFNPAEAVEVIKYVQTIMRIYPNRFDVSDIGIITPYRKQVEKIRVLLDRFDLSAIKVGSVEEFQGQERQIIIISTVRSTEDFVAFDCRHNIGFLSNPKRFNVSITRAQSLMVIVGNPIVLCYDAYWCAIIQYAVLNDCYKGCNLPP 815
QI+LAGDP QLGPV++S ++ YGLN+S LERL + P YQRDE + G +NPLLVTKL+ NYRSH +LL LPS LFYH EL A+ ++V G LP P IFHGVR + REG SPSWFNPAEAV+V++Y + ++ SDIG+ITPYRKQVEKIR+LL DL IKVGSVEEFQGQE +IIISTVRS ED D R+ +GFLSN KRFNV+ITR ++L++++GNP VL D + A+++Y++ N Y GC+LPP
Sbjct: 909 QIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKNYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPLIFHGVRGSEAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDD-RYFLGFLSNSKRFNVAITRPKALLIVLGNPHVLVRDPCFGALLEYSITNGVYMGCDLPP 1178
The following BLAST results are available for this feature:
|
