TCONS_00016667 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016667
Unique NameTCONS_00016667
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1717

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016667 ID=TCONS_00016667|Name=TCONS_00016667|organism=Clytia hemisphaerica|type=transcript|length=1717bp
ATTTGAAGCGTTAATTTGCCTTATAAGGAAACACCTCTAAAAATAtaata
ctttcaatttttctcattCAATCAGGTTGTATGAATACACCAAAACTTGG
CTTGAGAGTGTGTCAAGACCACGAAGACACAACAGCAAGATTTAGTGATC
ATTAccagaaacaaaaacaaaacaatgctGCTATTGCCGATGATAAAGAT
GAAGTAGATGAAGAATCTTTAAACGAAGACAACGAGACCGCAACAACTGA
TGAAGACGGACTGAACGATAATGACTCTGATCCTGCTCAGATTACAacga
aaaaggagaaaaatggTATTTATCAAGGAGTGATCAGAATTTGCAACACG
AAGGAAACCAGAACATCAACACTTTACGAAGTTTTATGGCATACTGGCCA
AAAAACCTGGGTACGGGATGAGAAATTACCTCAACACCTAAGAAATGCCA
ATAACAAAATTGTTGTACAAGATGTGACGTCACTTGGTCAACCAAGGCAA
ATTTTGGGATTCACAAGAAATGACAACGGAGATAGTGTTGACCTACCCGT
cccagaaaaaaagGAAGAAACTCCAGATCCTTCAAGTTTAAAATGCGGAA
CGGATAAATCGAAACATATTGCCAAGAATAAGAAAACAGCAGGTGTTTTG
GTAATGGCGAAACCATGTGGTATCGTTGTCAACATAAAGGAGCTGTTCAA
TTGTGAATCCATATCTCAAGTTTATGGCCATTTGCACGACCTCTTAAGCC
AAGACGAATATCAATCAATCAATTGTATCGTATACGACGATGCTTGTCAT
CTTTTGAAGTATTCAAAAAATCCTGTCCGGAAGGATGACACTAACACCAG
CAAGCGTATTGCTACATTGGAAATGAAAATTGATCGATTCCACTATCGTA
ATCATGTGGATCCATGGTGTCGCAGAGTTTGTAATCCTAAAACCTCAGAT
CACTTAGCCGGAGTCAACACAGAAACATGCGAGCAGCTCTTTTCTTGGTT
TTCAAAATATGCACCGATGACCAAACATATGAATAGACAAAGATTCATAT
TTTTGACGCTATACTTATTGCATTTTCACAACAAAAAGAAACTTTCGATG
AAGTATTAGAACTATCCTTATTATTAAAAGGAGGATGTATCAATGTATCA
ATGAGCGAACGATTTTGGTACTTTCGTGGTGCCTAGCatcatttttttgc
attttgtaTGGAATTAACATGAAAATTGATGTATTATGAAACTTGCAAAT
CaaccttaaaaaaaactttctttgtttGTTTAACATTTACTTTGACGATA
CCTTCGAAAGGTTGAttgttttttagatttttctataGGTCTTattaaaa
tacacgttttttttataaggaaccttaatatagctccgagcctggagttc
cttattttgccagagagtttcagcctcaaagttccttatcgagttcctta
gtTACTTAGCTGTTAAGTTTGGATTCGCTAAGTGTGTAGCTTCTTTATCa
gcattttttgtctttttgacaTATTGAAAGCCGTTTCAGGAATATTTTCC
GTCTTTTTATTTAGGTTGTTGTAAATGTGTGCAAGTTCAAATTGAACTCT
TGCTGTTcctcaacttgattttttattctcagcctaagcagttccttaac
aattccttatttctcagaccattttcagcctaaagttccttataaaaaaa
cgtgtaatagacTCTCG
Run BLAST on NCBI

protein sequence of TCONS_00016667-protein

>TCONS_00016667-protein ID=TCONS_00016667-protein|Name=TCONS_00016667-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
MNTPKLGLRVCQDHEDTTARFSDHYQKQKQNNAAIADDKDEVDEESLNED
NETATTDEDGLNDNDSDPAQITTKKEKNGIYQGVIRICNTKETRTSTLYE
VLWHTGQKTWVRDEKLPQHLRNANNKIVVQDVTSLGQPRQILGFTRNDNG
DSVDLPVPEKKEETPDPSSLKCGTDKSKHIAKNKKTAGVLVMAKPCGIVV
NIKELFNCESISQVYGHLHDLLSQDEYQSINCIVYDDACHLLKYSKNPVR
KDDTNTSKRIATLEMKIDRFHYRNHVDPWCRRVCNPKTSDHLAGVNTETC
EQLFSWFSKYAPMTKHMNRQRFIFLTLYLLHFHNKKKLSMKY
Run BLAST on NCBI

transcript from alignment at sc0000246:392675..397543+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016667 ID=TCONS_00016667|Name=TCONS_00016667|organism=Clytia hemisphaerica|type=transcript|length=4869bp|location=Sequence derived from alignment at sc0000246:392675..397543+ (Clytia hemisphaerica)
ATTTGAAGCGTTAATTTGCCTTATAAGGAAACACCTCTAAAAATAtaata ctttcaatttttctcattCAATCAGGTTGTATGAATACACCAAAACTTGG CTTGAGAGTGTGTCAAGACCACGAAGACACAACAGCAAGATTTAGTGATC ATTAccagaaacaaaaacaaaacaatgctGCTATTGCCGATGATAAAGAT GAAGTAGATGAAGAATCTTTAAACGAAGACAACGAGACCGCAACAACTGA TGAAGACGGACTGAACGATAATGACTCTGATCCTGCTCAGATTACAacga aaaaggagaaaaatggTATTTATCAAGGAGTGATCAGAATTTGCAACACG AAGGAAACCAGAACATCAACACTTTACGAAGTAACAATCTATCATTTCGT GAATTCCTACTTTCTTGATTATGAACAGCTCACATTATACAGTCAGCAAA TTATAAGAATGATAAATAAAAAGGCACAATTTAACTTGTCAAGTAACTTG TCAAATGAGTTTTATCATCAACGGTGCTTTTATTCGTTTTTAGGTTTTAT GGCATACTGGCCAAAAAACCTGGGTACGGGATGAGAAATTACCTCAACAC CTAAGAAATGCCAATAACAAAATTGTTGTACAAGATGTGACGTCACTTGG TCAACCAAGGCAAATTTTGGGATTCACAAGAAATGACAACGGAGATAGTG TTGACCTACCCGTcccagaaaaaaagtaaatttttgctttttcctTGCAG CCTGTGACTGTAGCTCTTTACATTAATTCCaggtttataaaaaaaatatg tgtgtgaTAATTGGCACAGAGGTCCCTCCTCCATCAGAATAAAGTGGAGA CGATTGGAAAAGTTTTGAGCCATTTATTAATGACGTCACTTTTCAGTACA AACTCTCTAAACATTATCctcaaaaagttcttaaaatgaaaacttttact gcttcattttgaatattataGAGAACAGATGAATACAATGGGGCTTTTGA ATATAGGGTTTTGATGTCTATATTTCGAGATGTTCGAAAACGGACTGTTT TTGTTAAATCAGCACATTTTGCAGCATATTAAAAGTAACAGTCAAATTTC TGTTTCTGGGGTTTCTAGTGGACAAGAAAATCACATCAACGTTACAAACC TTCACacgaaaagattttttgaaatttaaaaaggttgGTTGCCCACTGTG ggggtttggtacaggctaatcTTAAGTTTATCATGGAATGATTATGAAGT CTGTGAATCAagtacaaaatttattttaggGAAGAAACTCCAGATCCTTC AAGTTTAAAATGCGGAACGGATAAATCGAAACATATTGCCAAGAATAAGA AAACAGCAGGtacaaagtgtttttttttatatattatctCCTATAATAGT AGATCCTGATTGTTCAAGGCAATCGATATTAGGCTTACATAGAGGATCTG GGAGTGACCTGAGACAAAAGTTGCATTCAGTTTTCTCACAATTAGTTTAA AAGATCAATCAGCTTGAGGTAAACTCGTTTTCCAGCCAAATGACCTTcga atcgaaaaaaattgcttttttaattttttttgcgctaatttttaaaacat ttgtaGAGAAATGTATCATCCTTATATCCCTATAATAGCAAAGAGTTCTT CGTACGTAAAGATTGATTTTTCAGGTGTTTTGGTAATGGCGAAACCATGT GGTATCGTTGTCAACATAAAGGAGCTGTTCAATTGTGAATCCATATCTCA AGTTTATGGCCATTTGCACGACCTCTTAAGCCAAGACGAATATCAATCAA TCAGTAAGTAATTTGACGATCAGTTTAGTATCTGATTCTTAACAAGAACT TAAATTATAAAAATGGCAGTCCGTTTAATACATTTAATACTCttgttaaa aaaaacaaccttagAGAGATTTGATGAACGTTTTTTAGACTTAACAATAA TTTTAAatctgaaattaaaaataattaataaagATGTTTTAAAAGCATAC AACGCTTTCATTTTTTAACCATAGCGTTAGCATTCAGGCTACCCTCAATA TGGTAACTGAATTGGACAGTAAAAATTTTAACTCATTTCTGTTTTTAGAT TGTATCGTATACGACGATGCTTGTCATCTTTTGAAGTATTCAAAAAATCC TGTCCGGAAGGATGACACTAACACCAGCAAGCGTATTGCTACATTGGAAA TGAAAATTGATCGATTCCACTATCGTAATCATGTGGATCCATGGTGTCGC AGAGTTTGTAATCCTAAAACCTCAGATCACTTAGCCGGAGTAAGTAATTA TCTCTATTCCATTTCTATAATAGATTTTACAACGGAGCCATTCTCTGAgg caaaatattttgttacCTATTCAAAGCTACCATATTTTCATGGTAAGGCC CAGGATTATTCGGTTTGTTTAGATTATTTTCGACTATCTTCGTAACGTAT ATAATACagataaaacataaaaatcatcGAGGGATAAAACtttcccttta atttttttaggTCAACACAGAAACATGCGAGCAGCTCTTTTCTTGGTNCT CAACCAACGATCATTGgtgaaataacaaaaaaaaagaaattgatccgaaa aaacaagaagcctactttttttgattaaTTGCTCCTGAAGGAAAAAAGTT ACAATTAAAAGTAATAGCTCGCTGAAAAGATAATTCTGAGTGAGAGTATT CAAAGCTttagaactttttcaaaacattgaaaaatgaAGTAGAAGAGAAT ATACATCAATATTTTAacaattctgaaaatttgaactttGCTAATTTCGA AtatgttttcagatttttcacatCTTTCGTTTTTTCCCGCNTGAAGTAGA AGAGAATATACATCAATATTTTAacaattctgaaaatttgaactttGCTA ATTTCGAAtatgttttcagatttttcacatctttcgttttttcccgcaaa atttgctgctggctgcacgagtaAAACTGTTGGACGATATCTgtcgttgg cacggatttcgtggggtacatatacctatataccccataNTACATAGAGG ATCTGGGAGTGACCTGAGACAAAAGTTGCATTCAGTTTTCTCACAATTAG TTTAAAAGATCAATCAGCTTGAGGTAAACTCATTTTCCAGCCAAATGACC TTcgaatcgaaaaaaattgcttttttattttttttgcgctaatttttaaa acatttgtaGAGAAATGTATCATCCTTATATCCCTATAATAGCAAAGAGT TCTTCGTACGTAAAGATTGATTTTTCAGGTGTTTTGGTAATGGCGAAACC ATGTGGTATCGTTGTCAACATAAAGGAGCTGTTCAATTGTGAATCCATAT CTCAAGTTTATGGCCATTTGCACGACCTCTTAAGCCAAGACGAATATCAA TCAATCAGTAAGTAATTTGACGATCAGTTTAGTATCTGATTCTTAACAAG AACTTAAATTATAAAAATGGCAGTCCGTTTAATACATTTAATACTCttgt taaaaaaaacaaccttagAGAGATTTGATGAACGTTTTTTAGACTTAACA ATAATTTTAAatctgaaattaaaaataattaataaagATGTTTTAAAAGC ATACAACGCTTTCATTTTTTAACCATAGCGTTAGCATTCAGGCTACCCTC AATATGGTAACTGAATTGGACAGTAAAAATTTTAACTCATTTCTGTTTTT AGATTGTATCGTATACGACGATGCTTGTCATCTTTTGAAGTATTCAAAAA ATCCTGTCCGGAAGGATGACACTAACACCAGCAAGCGTATTGCTACATTG GAAATGAAAATTGATCGATTCCACTATCGTAATCATGTGGATCCATGGTG TCGCAGAGTTTGTAATCCTAAAACCTCAGATCACTTAGCCGGAGTAAGTA ATTATCTCTATTCCATTTCTATAATAGATTTTACAACGGAGCCATTCTCT GAggcaaaatattttgttacCTATTCAAAGCTACCATATTTTCATGGTAA GGCCCAGGATTATTCGGTTTGTTTAGATTATTTTCGACTATCTTCGTAAC GTATATAATACagataaaacataaaaatcatcGAGGGATAAAACTTTCCC TTTAAATTTTTTAGGTCAACACAGAAACATGCGAGCAGCTCTTTTCTTGG TTTTCAAAATATGCACCGATGACCAAACATATGAATAGACAAAGATTCAT ATTTTTGACGCTATACTTATTGCATTTTCACAACAAAAAGAAACTTTCGA TGAAGTATTAGAACTATCCTTATTATTAAAAGGAGGATGTATCAATGTAT CAATGAGCGAACGATTTTGGTACTTTCGTGGTGCCTAGCatcattttttt gcattttgtaTGGAATTAACATGAAAATTGATGTATTATGAAACTTGCAA ATCaaccttaaaaaaaactttctttgtttGTTTAACATTTACTTTGACGA TACCTTCGAAAGGTTGAttgttttttagatttttctataGGTCTTattaa aatacacgttttttttataaggaaccttaatatagctccgagcctggagt tccttattttgccagagagtttcagcctcaaagttccttatcgagttcct tagtTACTTAGCTGTTAAGTTTGGATTCGCTAAGTGTGTAGCTTCTTTAT CagcattttttgtctttttgacaTATTGAAAGCCGTTTCAGGAATATTTT CCGTCTTTTTATTTAGGTTGTTGTAAATGTGTGCAAGTTCAAATTGAACT CTTGCTGTTcctcaacttgattttttattctcagcctaagcagttcctta acaattccttatttctcagaccattttcagcctaaagttccttataaaaa aacgtgtaatagacTCTCG

Coding sequence (CDS) from alignment at sc0000246:392675..397543+

>TCONS_00016667 ID=TCONS_00016667|Name=TCONS_00016667|organism=Clytia hemisphaerica|type=CDS|length=6174bp|location=Sequence derived from alignment at sc0000246:392675..397543+ (Clytia hemisphaerica)
ATGAATACACCAAAACTTGGCTTGAGAGTGTGTCAAGACCACGAAGACAC
AACAGCAAGATTTAGTGATCATTAccagaaacaaaaacaaaacaatgctG
CTATTGCCGATGATAAAGATGAAGTAGATGAAGAATCTTTAAACGAAGAC
AACGAGACCGCAACAACTGATGAAGACGGACTGAACGATAATGACTCTGA
TCCTGCTCAGATTACAacgaaaaaggagaaaaatggTATTTATCAAGGAG
TGATCAGAATTTGCAACACGAAGGAAACCAGAACATCAACACTTTACGAA
GTTTTATGGCATACTGGCCAAAAAACCTGGGTACGGGATGAGAAATTACC
TCAACACCTAAGAAATGCCAATAACAAAATTGTTGTACAAGATGTGACGT
CACTTGGTCAACCAAGGCAAATTTTGGGATTCACAAGAAATGACAACGGA
GATAGTGTTGACCTACCCGTcccagaaaaaaagGAAGAAACTCCAGATCC
TTCAAGTTTAAAATGCGGAACGGATAAATCGAAACATATTGCCAAGAATA
AGAAAACAGCAGGTGTTTTGGTAATGGCGAAACCATGTGGTATCGTTGTC
AACATAAAGGAGCTGTTCAATTGTGAATCCATATCTCAAGTTTATGGCCA
TTTGCACGACCTCTTAAGCCAAGACGAATATCAATCAATCAATTGTATCG
TATACGACGATGCTTGTCATCTTTTGAAGTATTCAAAAAATCCTGTCCGG
AAGGATGACACTAACACCAGCAAGCGTATTGCTACATTGGAAATGAAAAT
TGATCGATTCCACTATCGTAATCATGTGGATCCATGGTGTCGCAGAGTTT
GTAATCCTAAAACCTCAGATCACTTAGCCGGAGTCAACACAGAAACATGC
GAGCAGCTCTTTTCTTGGTTTTCAAAATATGCACCGATGACCAAACATAT
GAATAGACAAAGATTCATATTTTTGACGCTATACTTATTGCATTTTCACA
ACAAAAAGAAACTTTCGATGAAGTATTAGATGAATACACCAAAACTTGGC
TTGAGAGTGTGTCAAGACCACGAAGACACAACAGCAAGATTTAGTGATCA
TTAccagaaacaaaaacaaaacaatgctGCTATTGCCGATGATAAAGATG
AAGTAGATGAAGAATCTTTAAACGAAGACAACGAGACCGCAACAACTGAT
GAAGACGGACTGAACGATAATGACTCTGATCCTGCTCAGATTACAacgaa
aaaggagaaaaatggTATTTATCAAGGAGTGATCAGAATTTGCAACACGA
AGGAAACCAGAACATCAACACTTTACGAAGTTTTATGGCATACTGGCCAA
AAAACCTGGGTACGGGATGAGAAATTACCTCAACACCTAAGAAATGCCAA
TAACAAAATTGTTGTACAAGATGTGACGTCACTTGGTCAACCAAGGCAAA
TTTTGGGATTCACAAGAAATGACAACGGAGATAGTGTTGACCTACCCGTc
ccagaaaaaaagGAAGAAACTCCAGATCCTTCAAGTTTAAAATGCGGAAC
GGATAAATCGAAACATATTGCCAAGAATAAGAAAACAGCAGGTGTTTTGG
TAATGGCGAAACCATGTGGTATCGTTGTCAACATAAAGGAGCTGTTCAAT
TGTGAATCCATATCTCAAGTTTATGGCCATTTGCACGACCTCTTAAGCCA
AGACGAATATCAATCAATCAATTGTATCGTATACGACGATGCTTGTCATC
TTTTGAAGTATTCAAAAAATCCTGTCCGGAAGGATGACACTAACACCAGC
AAGCGTATTGCTACATTGGAAATGAAAATTGATCGATTCCACTATCGTAA
TCATGTGGATCCATGGTGTCGCAGAGTTTGTAATCCTAAAACCTCAGATC
ACTTAGCCGGAGTCAACACAGAAACATGCGAGCAGCTCTTTTCTTGGTTT
TCAAAATATGCACCGATGACCAAACATATGAATAGACAAAGATTCATATT
TTTGACGCTATACTTATTGCATTTTCACAACAAAAAGAAACTTTCGATGA
AGTATTAGATGAATACACCAAAACTTGGCTTGAGAGTGTGTCAAGACCAC
GAAGACACAACAGCAAGATTTAGTGATCATTAccagaaacaaaaacaaaa
caatgctGCTATTGCCGATGATAAAGATGAAGTAGATGAAGAATCTTTAA
ACGAAGACAACGAGACCGCAACAACTGATGAAGACGGACTGAACGATAAT
GACTCTGATCCTGCTCAGATTACAacgaaaaaggagaaaaatggTATTTA
TCAAGGAGTGATCAGAATTTGCAACACGAAGGAAACCAGAACATCAACAC
TTTACGAAGTTTTATGGCATACTGGCCAAAAAACCTGGGTACGGGATGAG
AAATTACCTCAACACCTAAGAAATGCCAATAACAAAATTGTTGTACAAGA
TGTGACGTCACTTGGTCAACCAAGGCAAATTTTGGGATTCACAAGAAATG
ACAACGGAGATAGTGTTGACCTACCCGTcccagaaaaaaagGAAGAAACT
CCAGATCCTTCAAGTTTAAAATGCGGAACGGATAAATCGAAACATATTGC
CAAGAATAAGAAAACAGCAGGTGTTTTGGTAATGGCGAAACCATGTGGTA
TCGTTGTCAACATAAAGGAGCTGTTCAATTGTGAATCCATATCTCAAGTT
TATGGCCATTTGCACGACCTCTTAAGCCAAGACGAATATCAATCAATCAA
TTGTATCGTATACGACGATGCTTGTCATCTTTTGAAGTATTCAAAAAATC
CTGTCCGGAAGGATGACACTAACACCAGCAAGCGTATTGCTACATTGGAA
ATGAAAATTGATCGATTCCACTATCGTAATCATGTGGATCCATGGTGTCG
CAGAGTTTGTAATCCTAAAACCTCAGATCACTTAGCCGGAGTCAACACAG
AAACATGCGAGCAGCTCTTTTCTTGGTTTTCAAAATATGCACCGATGACC
AAACATATGAATAGACAAAGATTCATATTTTTGACGCTATACTTATTGCA
TTTTCACAACAAAAAGAAACTTTCGATGAAGTATTAGATGAATACACCAA
AACTTGGCTTGAGAGTGTGTCAAGACCACGAAGACACAACAGCAAGATTT
AGTGATCATTAccagaaacaaaaacaaaacaatgctGCTATTGCCGATGA
TAAAGATGAAGTAGATGAAGAATCTTTAAACGAAGACAACGAGACCGCAA
CAACTGATGAAGACGGACTGAACGATAATGACTCTGATCCTGCTCAGATT
ACAacgaaaaaggagaaaaatggTATTTATCAAGGAGTGATCAGAATTTG
CAACACGAAGGAAACCAGAACATCAACACTTTACGAAGTTTTATGGCATA
CTGGCCAAAAAACCTGGGTACGGGATGAGAAATTACCTCAACACCTAAGA
AATGCCAATAACAAAATTGTTGTACAAGATGTGACGTCACTTGGTCAACC
AAGGCAAATTTTGGGATTCACAAGAAATGACAACGGAGATAGTGTTGACC
TACCCGTcccagaaaaaaagGAAGAAACTCCAGATCCTTCAAGTTTAAAA
TGCGGAACGGATAAATCGAAACATATTGCCAAGAATAAGAAAACAGCAGG
TGTTTTGGTAATGGCGAAACCATGTGGTATCGTTGTCAACATAAAGGAGC
TGTTCAATTGTGAATCCATATCTCAAGTTTATGGCCATTTGCACGACCTC
TTAAGCCAAGACGAATATCAATCAATCAATTGTATCGTATACGACGATGC
TTGTCATCTTTTGAAGTATTCAAAAAATCCTGTCCGGAAGGATGACACTA
ACACCAGCAAGCGTATTGCTACATTGGAAATGAAAATTGATCGATTCCAC
TATCGTAATCATGTGGATCCATGGTGTCGCAGAGTTTGTAATCCTAAAAC
CTCAGATCACTTAGCCGGAGTCAACACAGAAACATGCGAGCAGCTCTTTT
CTTGGTTTTCAAAATATGCACCGATGACCAAACATATGAATAGACAAAGA
TTCATATTTTTGACGCTATACTTATTGCATTTTCACAACAAAAAGAAACT
TTCGATGAAGTATTAGATGAATACACCAAAACTTGGCTTGAGAGTGTGTC
AAGACCACGAAGACACAACAGCAAGATTTAGTGATCATTAccagaaacaa
aaacaaaacaatgctGCTATTGCCGATGATAAAGATGAAGTAGATGAAGA
ATCTTTAAACGAAGACAACGAGACCGCAACAACTGATGAAGACGGACTGA
ACGATAATGACTCTGATCCTGCTCAGATTACAacgaaaaaggagaaaaat
ggTATTTATCAAGGAGTGATCAGAATTTGCAACACGAAGGAAACCAGAAC
ATCAACACTTTACGAAGTTTTATGGCATACTGGCCAAAAAACCTGGGTAC
GGGATGAGAAATTACCTCAACACCTAAGAAATGCCAATAACAAAATTGTT
GTACAAGATGTGACGTCACTTGGTCAACCAAGGCAAATTTTGGGATTCAC
AAGAAATGACAACGGAGATAGTGTTGACCTACCCGTcccagaaaaaaagG
AAGAAACTCCAGATCCTTCAAGTTTAAAATGCGGAACGGATAAATCGAAA
CATATTGCCAAGAATAAGAAAACAGCAGGTGTTTTGGTAATGGCGAAACC
ATGTGGTATCGTTGTCAACATAAAGGAGCTGTTCAATTGTGAATCCATAT
CTCAAGTTTATGGCCATTTGCACGACCTCTTAAGCCAAGACGAATATCAA
TCAATCAATTGTATCGTATACGACGATGCTTGTCATCTTTTGAAGTATTC
AAAAAATCCTGTCCGGAAGGATGACACTAACACCAGCAAGCGTATTGCTA
CATTGGAAATGAAAATTGATCGATTCCACTATCGTAATCATGTGGATCCA
TGGTGTCGCAGAGTTTGTAATCCTAAAACCTCAGATCACTTAGCCGGAGT
CAACACAGAAACATGCGAGCAGCTCTTTTCTTGGTTTTCAAAATATGCAC
CGATGACCAAACATATGAATAGACAAAGATTCATATTTTTGACGCTATAC
TTATTGCATTTTCACAACAAAAAGAAACTTTCGATGAAGTATTAGATGAA
TACACCAAAACTTGGCTTGAGAGTGTGTCAAGACCACGAAGACACAACAG
CAAGATTTAGTGATCATTAccagaaacaaaaacaaaacaatgctGCTATT
GCCGATGATAAAGATGAAGTAGATGAAGAATCTTTAAACGAAGACAACGA
GACCGCAACAACTGATGAAGACGGACTGAACGATAATGACTCTGATCCTG
CTCAGATTACAacgaaaaaggagaaaaatggTATTTATCAAGGAGTGATC
AGAATTTGCAACACGAAGGAAACCAGAACATCAACACTTTACGAAGTTTT
ATGGCATACTGGCCAAAAAACCTGGGTACGGGATGAGAAATTACCTCAAC
ACCTAAGAAATGCCAATAACAAAATTGTTGTACAAGATGTGACGTCACTT
GGTCAACCAAGGCAAATTTTGGGATTCACAAGAAATGACAACGGAGATAG
TGTTGACCTACCCGTcccagaaaaaaagGAAGAAACTCCAGATCCTTCAA
GTTTAAAATGCGGAACGGATAAATCGAAACATATTGCCAAGAATAAGAAA
ACAGCAGGTGTTTTGGTAATGGCGAAACCATGTGGTATCGTTGTCAACAT
AAAGGAGCTGTTCAATTGTGAATCCATATCTCAAGTTTATGGCCATTTGC
ACGACCTCTTAAGCCAAGACGAATATCAATCAATCAATTGTATCGTATAC
GACGATGCTTGTCATCTTTTGAAGTATTCAAAAAATCCTGTCCGGAAGGA
TGACACTAACACCAGCAAGCGTATTGCTACATTGGAAATGAAAATTGATC
GATTCCACTATCGTAATCATGTGGATCCATGGTGTCGCAGAGTTTGTAAT
CCTAAAACCTCAGATCACTTAGCCGGAGTCAACACAGAAACATGCGAGCA
GCTCTTTTCTTGGTTTTCAAAATATGCACCGATGACCAAACATATGAATA
GACAAAGATTCATATTTTTGACGCTATACTTATTGCATTTTCACAACAAA
AAGAAACTTTCGATGAAGTATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009317XLOC_009317Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016667-proteinTCONS_00016667-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016667-exon-sc0000246-1491911889:392675..393054TCONS_00016667-exon-sc0000246-1491911889:392675..393054Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1510915933:392675..393054TCONS_00016667-exon-sc0000246-1510915933:392675..393054Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1575043694:392675..393054TCONS_00016667-exon-sc0000246-1575043694:392675..393054Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1491911889:393218..393399TCONS_00016667-exon-sc0000246-1491911889:393218..393399Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1510915933:393218..393399TCONS_00016667-exon-sc0000246-1510915933:393218..393399Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1575043694:393218..393399TCONS_00016667-exon-sc0000246-1575043694:393218..393399Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1491911889:393954..394033TCONS_00016667-exon-sc0000246-1491911889:393954..394033Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1510915933:393954..394033TCONS_00016667-exon-sc0000246-1510915933:393954..394033Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1575043694:393954..394033TCONS_00016667-exon-sc0000246-1575043694:393954..394033Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1491911889:394349..394477TCONS_00016667-exon-sc0000246-1491911889:394349..394477Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1510915933:394349..394477TCONS_00016667-exon-sc0000246-1510915933:394349..394477Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1575043694:394349..394477TCONS_00016667-exon-sc0000246-1575043694:394349..394477Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1491911889:394773..394963TCONS_00016667-exon-sc0000246-1491911889:394773..394963Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1510915933:394773..394963TCONS_00016667-exon-sc0000246-1510915933:394773..394963Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1575043694:394773..394963TCONS_00016667-exon-sc0000246-1575043694:394773..394963Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1491911889:396789..397543TCONS_00016667-exon-sc0000246-1491911889:396789..397543Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1510915933:396789..397543TCONS_00016667-exon-sc0000246-1510915933:396789..397543Clytia hemisphaericaexon
TCONS_00016667-exon-sc0000246-1575043694:396789..397543TCONS_00016667-exon-sc0000246-1575043694:396789..397543Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:392675..397543 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0480484 0.0231221 0.0472619 0.0322106 0.0106236 0.0251846 0.0407519 0.0190718 0.0397284 0 0.0158902 0.0104626 0.0314774 0.0327051 0.0489832 0.0573452 0.0710655 0.0422382 0.00836592 0.0261702 0.0543182 0.0223179 0.0269749 0.0327701 0.0336789 0.0225432 0.0645186 0.144037 0.0175765 0.0206802
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016667 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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