TCONS_00016696 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016696
Unique NameTCONS_00016696
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016696 ID=TCONS_00016696|Name=TCONS_00016696|organism=Clytia hemisphaerica|type=transcript|length=1166bp
GCTTCTACGGCACGATCTAAAAAAGGAAACGAATCATAATGCATAATAAT
TATAGTATAGTATTATAGCAGTATAACAGCTACAGTTATATATGTAATGC
GATGATAATGTAACTACGTAATATATAGAACCATTAATACGACACTTTCT
AACCAATATTTCCAAGTGGAAGTCGAATGACTAAAGATTATACTTCAAAG
CCTCAAAACAAAGCGTACCAAGCTCAGTCAGAAAACTGAAATCAGTGAAA
ACTAAATATTCACATGTATTGGCTTTTTTCGTAGGATTGCCAACTCGAAT
CTCCAGAGTAaatttcaaagataaaaatGGTAGCCTTCTTTAGTGAAACA
GCGTAAGCTGAAAGAAGGGGAGATGAGTGCAGATCTTTGTTGGTCGATTG
TTCGCAAGAACTCTTGCTTCCTTGTCAAAAGTCTTGGAAAGACATTGACT
AAAGAACCTAACAATTTGTCTGGAGTCAATAACTTTGCCTCAAATGGATA
CATCAACAAAAAGACAGTTGGTGTAGATGCTGACCCAAGTGGCAAAGGAG
TCGTCCTTTCTATTCGCAAATCAAAAAatGGTAACAAACCAGCCAAATCT
ATTAGCCGAACCACTGTCCGTGGAAGCCGACACTCCATTAAAGTTATCCG
AGATACTTTAAACAAAAGCGAGTACCGCAAAGATCTGTCTGACATTGCCA
TTCGACGTGCATCGGCCATCATCCGAAGCCAAAACACTTCCGCCGCAAAA
AAGCAAAGATCCCGAAGAAAGAAGAACTAATTTATTCTCACGAAATAAAT
CCCCCTCCTGTAAATCACTTCTCTTTTTTGTTCGTTTCGTTGTatcctag
actggagtcgtttataatgcatgtaatactaataataaacacaaacaaga
cgactcagagtcgaaaatttcgcacagtgtttgattattcatagatgaaa
taatcattttaAACGACCGGGACTGGGGACTAGGGTTAGAGAATGTCAGG
TCAGACCTGAGAAAAACTGGCTCCAACAGAGAATAAAGTTATCCTTACAG
AGACAAGGCGAAAAAGTGACTCTAAGNAACGACCGGGACTGGGGGAGTAC
TAGGGTTAGAGAATGTCAGGTCAGACCTGAGAAAAACTGGCTCCAACAGA
GAATAAAGTTATCCTT
Run BLAST on NCBI

protein sequence of TCONS_00016696-protein

>TCONS_00016696-protein ID=TCONS_00016696-protein|Name=TCONS_00016696-protein|organism=Clytia hemisphaerica|type=polypeptide|length=135bp
MSADLCWSIVRKNSCFLVKSLGKTLTKEPNNLSGVNNFASNGYINKKTVG
VDADPSGKGVVLSIRKSKNGNKPAKSISRTTVRGSRHSIKVIRDTLNKSE
YRKDLSDIAIRRASAIIRSQNTSAAKKQRSRRKKN
Run BLAST on NCBI

transcript from alignment at sc0000246:313904..319417-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016696 ID=TCONS_00016696|Name=TCONS_00016696|organism=Clytia hemisphaerica|type=transcript|length=5514bp|location=Sequence derived from alignment at sc0000246:313904..319417- (Clytia hemisphaerica)
GCTTCTACGGCACGATCTAAAAAAGGAAACGAATCATAATGCATAATAAT
TATAGTATAGTATTATAGCAGTATAACAGCTACAGTTATATATGTAATGC
GATGATAATGTAACTACGTAATATATAGAACCATTAATACGACACTTTCT
AACCAATATTTCCAAGTGGAAGTCGAATGACTAAAGATTATACTTCAAAG
CCTCAAAACAAAGCGTACCAAGCTCAGTCAGAAAACTGAAATCAGTGAAA
ACTAAATATTCACATGTATTGGCTTTTTTCGTAGGATTGCCAACTCGAAT
CTCCAGAGTAAATTTCAAAGATAAAAATGGTAGCCTTCTTTAGTGAAACA
GCGTAAGCTGAAAGAAGGTGAGATTAAACTGTGGTTGAAGATTGATACTT
TTACCTATGCCTATCTTAGCAATCTTTCAACAATAATTGAAGAAATATGG
ATGATTCAATTCTTGAATGTTCTAATTATGTTATTTTCAGGGGAGATGAG
TGCAGATCTTTGTTGGTCGATTGTTCGCAAGAACTCTTGCTTCCTTGTCA
AAAGTCTTGGAAAGACATTGACTAAAGTAGGTAAAACATTTAAATTGTGT
AATTTTGTTTTGGAAATGTTCAATGATGTCTGTTTCAAGACGGGACTGAC
AATGATGATACCTTATTTTACTGAGAACATAATTTTTTTCTCCATTTTCA
CGAGTTTTTGTAGTTTGATAACTAGATATGACAGCAAAACTTTAATATTG
TTTTAGGAACCTAACAATTTGTCTGGAGTCAATAACTTTGCCTCAAATGG
ATACATCAACAAAAAGGTATAAATTCAACTTTTTGTGTTTATGGAGTGAC
TTGCTCATTTCACTGCGCTGTTATTCTAGTTCTTACTATGCATCCAGGAT
GGGATTCCTGTTCTTTTATAACTGAAGATTCTCTGTCGGATGCAAAGATT
AAGTTTGACACTAGTTTGATGCTGTTTCACATCTATTGACTCAGCAATAG
GGTTTCAAGACATTCAAGATCTTATCTTATAGATTTAGTTTGTGTTTTCT
CTTTGAGTTCAGTAACACCTGTTCTGTCTTAAAGTTATAAATTATAATGT
AAAACAAGAACCTCAAGTCCTAAAGAATGTTCAAAAATTTTAGAACAGCA
CAGCCTTAGGCAAAATTTTCTGTGGTTCTTACGAAAAATCTTTTTTCTGT
CAATGATGTTGTTTCAAGACGGGACTGATTATGATGATCCTTTTTTAAAC
TGAGAAAAAAAATTCACCTTTCCCAGAAATTATTGTGTCATGCAGCTCTG
GAAGAATTAGGCAAATTCTGGAATAAAACATTTAAAAAGAAAATGATCGC
AATGATGATGATTAGTTTTTCTTACTCCAATATTTATGGTGATACAACTT
TTATTTCACCTCTGACAAACTGAATTGCATAATATATCTTCTGAATGTTA
GAACATTTGACAAATATTGATTTCATCTTAGAAAATCATTGTTTGCATCC
AGGATGGGATTCCTGTTCTTTTATAACTGAAGATTCTCTGTCGGATGCAA
AGATTAAGTTTGACACTAGTTTGATGCTGTTTCACATCTATTGGCTCAGC
AATAGGGTTTCAAGACATTCAAGAAGATCTTATAGATTTAGTTTGTTTTC
TCTTTGAGTTCAGTAACACCTGTTCTGTCTTAAAGTTATAAATTATAATG
TGAAACAAGAACATCAAGACTAAAAAATGTTCAAAAATTTTAGAACCAGC
CGTGCGGCCTTAGCCAAAATTTTCTGGTTCTTACAAAAAATCTTTTTTTG
TTCAATGATGTTGTTTCAAGACGGGACTGATTATGATGATCCTTTTTTAA
ACTGAGAACAAAACTTTCACCTTTCCCAGAAATTATTGTGTCATGCAGCT
CTGGAAGAATTAGGCAAATTCTGGAATAAAACATTTAAAAAGAAAATGAT
CGCAATGATGATGATTAGTTTTTCTTACTCCAATATTTATGGTGATACAA
CTTTTATTTCACCTCTGACAAACTGAATTGCATAATATATCTTCTGAATG
TTAGAACATTTGACAAATATTGATTTCATCTTAGAAAATCATTATTTGCA
TCCAGGATGGGATTCCTGTTCTTTTATAACTGAAGATTCTCTGTCGGATG
CAAAGATTAAGTTTGACACTAGTTTGATGCTGTTTCACATCTATTGGCTC
AGCAATAGGGTTTCAAGACATTCAAGAAGATCTTATAGATTTAGTTTGTT
TTCTCTTTGAGTTCAGTAACACCTGTTCTGTCTTAAAGTTATACGATGGC
AGAAGGCAAAGTTGTCGATTGCATCTATTTTGATTTTGCAAAAGCGTTTG
ACACCGTCCCTCACAGGAGGTTAAAGAAAAAACTGGAATGTTANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGCATCCAGGATGGGATTCC
TGTTCTTTTATAACTGAAGATTCTCTGTCGGATGCAAAGATTAAGTTTGA
CACTAGTTTGATGCTGTTTCACATCTATTGACTCAGCAATAGGGTTTCAA
GACATTCAAGACCTTATAGATTTGTTGTTTTTTCTTTGAGTACAGTAACA
GCTAAAAAGATTGTTTTGGCTTGAATGTAAAGGCCTGGAAGCCGACTATT
CTCATTATAGTATGATTGTAGCGTGCAAACCATGCCGAAAGTGACATGAG
TGTTTTCTGATTTGGAAATTTTTACTATAATTGTTCAGATCCTGGACACT
CATAACAGCTTTTGTCAGCATAATAGGTTTTTATTGTTGAACCTGTCTGA
AAAGAAAATTTAAAACTGGCAATCTCTGCTGAAAGTTTCTTATATAGTGG
GGCTTTTCATTCACAAATTGCCAAGATATAGAATCAACAGCCAATTTTCA
ATGAAGTTCTTTAAATTGTAGCCTTCTACTGGTGCTGTTGATTCAACAAT
CTTTTGCATCATTCCTTATTTTCTTGCTAAAGCTCACTCACAGTGATGTG
CTAATTAGTAACGAAATGATTTTTCTACACAACGTCCTCTTTTTTAGACA
GTTGGTGTAGATGCTGACCCAAGTGGCAAAGGAGTCGTCCTTTCTATTCG
CAAATCAAAAAGTAAGTGGCACTGCATCCTTTAATTATTTTGCTTCTATC
ATGGAGAGGTAAGTTCTGATTAAACTTCAGTGAATTATCGATCATCTTTG
ACCATCAGTCATTGGGGCATGGATTCCTGTAAAGCCTGAAGACCTAGATG
GAGTGATCAAGCTATTCCAAGCAAAAAATGAATTATAAAATTGTTAGTAT
TGTTTTCAAAAAGCAGCAAAACTTCCAATTGGTTGAGTGCTAGAATTCTA
TTTTAACGTTCCGTGGCCTTCGGGAGGATTTCCTACTGAACAGCACATTT
TTCGGCAGAAGCATGCTAGATCTATGGCTATAGGTAGCAACTTCTCAAAA
TAATAGAAAATATTTTTCCTTTTTCAGATGGTAACAAACCAGCCAAATCT
ATTAGCCGAACCACTGTCCGTGGAAGCCGACACTCCATTAAAGTTATCCG
AGATACTTTAAACAAAAGCGAGTACCGCAAAGATCTGTCTGACGTATGTG
TTTTATCTTGTGTGCACAACATGGTTCAGGGTTCTGACGGATATGACTAG
AGTACTTGGAGGTGTCTTTTCTTTGGAATATTTCTCCTTGAGGCTTCAGG
CCCTCTTCGTGGAGATATCTAATTAAAATAGTGAATTTTCTTTAGATACT
AAACCCTAAGACTGTTCCATCACAATTTTTATCATTTACTCAATAAATTT
AATGCTTTTTTTTTTCACGGAAGCTGGAAAGGCTTGGAAGCCGACTATCT
TTACTTTAGTGTAATTGTAGCGTGCAAACCAACGCCGAAAGTGATCTCTT
GTGTTTTCTGATTTCATCACTAATTCAATAGGGATTGAAATCCTGGACAC
TTGTAACAGATTTCAAATTCACAGAAGGTTGTATTTTTAAAGTCGTTCCT
GTTCCAAGAATTTTTCAAAATCAGTTTGCTTCTTCCCTTAGATTGCCATT
CGACGTGCATCGGCCATCATCCGAAGCCAAAACACTTCCGCCGCAAAAAA
GCAAAGATCCCGAAGAAAGAAGAACTAATTTATTCTCACGAAATAAATCC
CCCTCCTGTAAATCACTTCTCTTTTTTGTTCGTTTCGTTGTATCCTAGAC
TGGAGTCGTTTATAATGCATGTAATACTAATAATAAACACAAACAAGACG
ACTCAGAGTCGAAAATTTCGCACAGTGTTTGATTATTCATAGATGAAATA
ATCATTTTAAACGACCGGGACTGGGGACTAGGGTTAGAGAATGTCAGGTC
AGACCTGAGAAAAACTGGCTCCAACAGAGAATAAAGTTATCCTTACAGAG
ACAAGGCGAAAAAGTGACTCTAAGNAACGACCGGGACTGGGGGAGTACTA
GGGTTAGAGAATGTCAGGTCAGACCTGAGAAAAACTGGCTCCAACAGAGA
ATAAAGTTATCCTT

Coding sequence (CDS) from alignment at sc0000246:313904..319417-

>TCONS_00016696 ID=TCONS_00016696|Name=TCONS_00016696|organism=Clytia hemisphaerica|type=CDS|length=2040bp|location=Sequence derived from alignment at sc0000246:313904..319417- (Clytia hemisphaerica)
ATTGCCATTCGACGTGCATCGGCCATCATCCGAAGCCAAAACACTTCCGC
CGCAAAAAAGCAAAGATCCCGAAGAAAGAAGAACTAAATGGTAACAAACC
AGCCAAATCTATTAGCCGAACCACTGTCCGTGGAAGCCGACACTCCATTA
AAGTTATCCGAGATACTTTAAACAAAAGCGAGTACCGCAAAGATCTGTCT
GACACAGTTGGTGTAGATGCTGACCCAAGTGGCAAAGGAGTCGTCCTTTC
TATTCGCAAATCAAAAAGAACCTAACAATTTGTCTGGAGTCAATAACTTT
GCCTCAAATGGATACATCAACAAAAAGATGAGTGCAGATCTTTGTTGGTC
GATTGTTCGCAAGAACTCTTGCTTCCTTGTCAAAAGTCTTGGAAAGACAT
TGACTAAAATTGCCATTCGACGTGCATCGGCCATCATCCGAAGCCAAAAC
ACTTCCGCCGCAAAAAAGCAAAGATCCCGAAGAAAGAAGAACTAAATGGT
AACAAACCAGCCAAATCTATTAGCCGAACCACTGTCCGTGGAAGCCGACA
CTCCATTAAAGTTATCCGAGATACTTTAAACAAAAGCGAGTACCGCAAAG
ATCTGTCTGACACAGTTGGTGTAGATGCTGACCCAAGTGGCAAAGGAGTC
GTCCTTTCTATTCGCAAATCAAAAAGAACCTAACAATTTGTCTGGAGTCA
ATAACTTTGCCTCAAATGGATACATCAACAAAAAGATGAGTGCAGATCTT
TGTTGGTCGATTGTTCGCAAGAACTCTTGCTTCCTTGTCAAAAGTCTTGG
AAAGACATTGACTAAAATTGCCATTCGACGTGCATCGGCCATCATCCGAA
GCCAAAACACTTCCGCCGCAAAAAAGCAAAGATCCCGAAGAAAGAAGAAC
TAAATGGTAACAAACCAGCCAAATCTATTAGCCGAACCACTGTCCGTGGA
AGCCGACACTCCATTAAAGTTATCCGAGATACTTTAAACAAAAGCGAGTA
CCGCAAAGATCTGTCTGACACAGTTGGTGTAGATGCTGACCCAAGTGGCA
AAGGAGTCGTCCTTTCTATTCGCAAATCAAAAAGAACCTAACAATTTGTC
TGGAGTCAATAACTTTGCCTCAAATGGATACATCAACAAAAAGATGAGTG
CAGATCTTTGTTGGTCGATTGTTCGCAAGAACTCTTGCTTCCTTGTCAAA
AGTCTTGGAAAGACATTGACTAAAATTGCCATTCGACGTGCATCGGCCAT
CATCCGAAGCCAAAACACTTCCGCCGCAAAAAAGCAAAGATCCCGAAGAA
AGAAGAACTAAATGGTAACAAACCAGCCAAATCTATTAGCCGAACCACTG
TCCGTGGAAGCCGACACTCCATTAAAGTTATCCGAGATACTTTAAACAAA
AGCGAGTACCGCAAAGATCTGTCTGACACAGTTGGTGTAGATGCTGACCC
AAGTGGCAAAGGAGTCGTCCTTTCTATTCGCAAATCAAAAAGAACCTAAC
AATTTGTCTGGAGTCAATAACTTTGCCTCAAATGGATACATCAACAAAAA
GATGAGTGCAGATCTTTGTTGGTCGATTGTTCGCAAGAACTCTTGCTTCC
TTGTCAAAAGTCTTGGAAAGACATTGACTAAAATTGCCATTCGACGTGCA
TCGGCCATCATCCGAAGCCAAAACACTTCCGCCGCAAAAAAGCAAAGATC
CCGAAGAAAGAAGAACTAAATGGTAACAAACCAGCCAAATCTATTAGCCG
AACCACTGTCCGTGGAAGCCGACACTCCATTAAAGTTATCCGAGATACTT
TAAACAAAAGCGAGTACCGCAAAGATCTGTCTGACACAGTTGGTGTAGAT
GCTGACCCAAGTGGCAAAGGAGTCGTCCTTTCTATTCGCAAATCAAAAAG
AACCTAACAATTTGTCTGGAGTCAATAACTTTGCCTCAAATGGATACATC
AACAAAAAGATGAGTGCAGATCTTTGTTGGTCGATTGTTCGCAAGAACTC
TTGCTTCCTTGTCAAAAGTCTTGGAAAGACATTGACTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009327XLOC_009327Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016696-exon-sc0000246-1575043694:319051..319417TCONS_00016696-exon-sc0000246-1575043694:319051..319417Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1575043694:318842..318927TCONS_00016696-exon-sc0000246-1575043694:318842..318927Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1575043694:318602..318661TCONS_00016696-exon-sc0000246-1575043694:318602..318661Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1575043694:315307..315370TCONS_00016696-exon-sc0000246-1575043694:315307..315370Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1575043694:314825..314940TCONS_00016696-exon-sc0000246-1575043694:314825..314940Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1575043694:313904..314376TCONS_00016696-exon-sc0000246-1575043694:313904..314376Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1510915933:319051..319417TCONS_00016696-exon-sc0000246-1510915933:319051..319417Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1510915933:318842..318927TCONS_00016696-exon-sc0000246-1510915933:318842..318927Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1510915933:318602..318661TCONS_00016696-exon-sc0000246-1510915933:318602..318661Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1510915933:315307..315370TCONS_00016696-exon-sc0000246-1510915933:315307..315370Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1510915933:314825..314940TCONS_00016696-exon-sc0000246-1510915933:314825..314940Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1510915933:313904..314376TCONS_00016696-exon-sc0000246-1510915933:313904..314376Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1491911889:319051..319417TCONS_00016696-exon-sc0000246-1491911889:319051..319417Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1491911889:318842..318927TCONS_00016696-exon-sc0000246-1491911889:318842..318927Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1491911889:318602..318661TCONS_00016696-exon-sc0000246-1491911889:318602..318661Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1491911889:315307..315370TCONS_00016696-exon-sc0000246-1491911889:315307..315370Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1491911889:314825..314940TCONS_00016696-exon-sc0000246-1491911889:314825..314940Clytia hemisphaericaexon
TCONS_00016696-exon-sc0000246-1491911889:313904..314376TCONS_00016696-exon-sc0000246-1491911889:313904..314376Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016696-proteinTCONS_00016696-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:313904..319417 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1025.81	1074.98	1127.14	1310.53	751.347	622.091	814.156	875.85	1267.18	1055.88	1269.18	1559.94	1738.3	1824.06	1783.07	1718.21	1901.96	1938.33	985.913	1018.99	1874.6	1792.08	1502.84	1351.46	1054.25	1164.29	1795.42	1793.78	1230.04	1312.83
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029004L28e/Mak16
Blast
[Close]
BLAST of TCONS_00016696 vs. Swiss-Prot (Human)
Match: RL28 (60S ribosomal protein L28 OS=Homo sapiens GN=RPL28 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 6.627e-22
Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = 1 
Query:  373 MSADLCWSIVRKNSCFLVKSLGKTLTKEPNNLSGVNNFASNGYINKKTVGVDADPSGKGVVLSIRKSKNGNKPAKSISRTTV-RGSRHSIKVIRDTLNKSEYRKDL 687
            MSA L W +VR  S FL+K   +T + EPNNL   N+F  NG I++KTVGV+    GKGVV+ I++     KPA S  RTT+ + +R ++  IR  + K++YR DL
Sbjct:    1 MSAHLQWMVVRNCSSFLIKRNKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDL 106
The following BLAST results are available for this feature:
BLAST of TCONS_00016696 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RL286.627e-2245.2860S ribosomal protein L28 OS=Homo sapiens GN=RPL28... [more]
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