TCONS_00016741 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016741
Unique NameTCONS_00016741
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2544

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016741 ID=TCONS_00016741|Name=TCONS_00016741|organism=Clytia hemisphaerica|type=transcript|length=2544bp
ctttagaataaaaaaaatgaacacCGACAACGATCAGAACAACAGCCATG
TCAACGACAATGAAAATAACAACGTTAACGAAGAAAATAGAAAGAGGAGG
ATCGGCTCCCATGGCCGTTTCAAAATGAATAAGaccagttttgataaaaa
tcctgtcagcagaaaaaaaactgaaaaaggaaaattggCTTCAATCAAGA
GCAAGGTTGTACAATTACGTAATGTCTGCAAGACACCAATTGCTGTTTTA
GCCTACAAGGCAGATGGAAACATAAAAAGCTATGGATCGACGAAAGGAAT
GAGGATGTTTGCTCGAGATCCCTTAgtccttgagaaattcaagcAGGCCA
TGGAGATTGATGCTGCTGAGGAAGAAAGCGAGTCTTCTgaagaagaagag
gaagaagaagaaagcgaATCGGAAGAAAGTGAGGAAGATCAAattaatga
aaagaaaaagaaaaaaagaagagatcCGATTTAAAAGCGATTGGGAGGCG
TGTCTCAAAGCCGTTGAAAAGAGAACTCTGCTTGCAGATGTAACCAGAGC
TTCATCACGTCTTGGAAAAAGTTTTAGCTGGACGAAAGCCAACAAACCCA
GGTGGTGGCCCTGCAACGTCCCGTTCCAGTCACCCCatggaaaaatcaaa
acaccAGTGGACCAGATCGACATGGTGATGCGTTCGTTCCACGAACATCA
AATGCTTAAGATTGTTAAAAAGCATTCGACAATGGTAGCCGACTTTCACG
GACAGATTAGTGCATTGAAATCATACGCTTCCTCCTTTTCCGATGCCACA
AAGTTAGCTGCGTGTTGCTGTTGGTTCCAAATGCACCGGAAACTGACTAA
TTTGTCTGTTTGTGATATCGATTTAAAaagTCGGTCCCTTACGTTATCGA
CTGATAAAGAACCGGTAGCATTCGAAAGTGTTAATTCTGCGTTGAGCTTC
CACTTCCTCGGCACGAAAGATCACGAGGATTTCTTTGGGAACCTCTCTTT
GGCACTTGCTGTCAATGAAATGCAGCAGTTACTTGATTGTATTACTAGCG
GAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGCTCGATGCCTAT
GACAAAGACACccttgaaaaatctcttttggcttCTGTATCGAAACCTAA
AGACCCAAAACTACGACTGACCATGACATTGGGACATCACGACATAATAT
AAAACTACGATAAGACAGAACGACTGACAAACTCACAAACTCAGGACAGG
TCTTCCTCAACGTACTTTCTGTGCCGATTGATTATTTTTAAACTCGACTA
TACTCTTCTTAAATTTGGAAAGTGGacttgaagtttcaaaattgaattca
aaattacGTCTTTTCCGTCTTTTACTtacttttatttgaaagctttgaGA
AATTTATTCAATACTGAATATTTCAAagttaaaaagtcaaaacatgaTGA
TGTGGTGTTGCTTTCTAAatcatttgatttcttttagtAATGGTGAATTT
GTTGGGTATTGCTTtgagcctcaacaaaaatttaaagattgTAGATGAAG
AAGGCGTGAGTGTTGTTTGCGTCGATGATACCTCGTTATGTACGATGCCA
TTCATACTCACTTCTGGCGGATGTTTATATTTGGCTGCCTTTGAGGACTA
TGATCCAGAGAGTTGTCGCAGCCACAACATGTACTGTTATGGTAGAGAGG
ATGAGGAACAGGTAGTCTGCCGCAATTGTCACCTTGCCTATCACTTACCC
TGTATTCGATGGCAAGATACATGTGGCTGCGATAAAATCGAGAACATAAA
ATTACGcttAATTGATATGTTCCACGAACGCTCGATCAACACCTTTTTGC
GTCTGATCTACAAAAGTACCGACAAAATTATAaaattttcttcgaatttg
tTGGATCAGAGCCAGAGATCGGCAAGATCGGAGCTGGTTGTTCGCCTTCT
TTCGGAGGGTAAATGTGACGCACTGATGTTGATGAACACCTTCAGTAAAC
AAATCCCTCAGCAGATAGTCCGCACTCTAACCTCGGTATTGATGGCATCG
CCGGTGTTGGAGGGAAATCGTTCATTTCAAGAACGAAATCATCAAAGGGT
CATTACTGAATTCCTTGTGCCAGAAGTATTGACGTATTTGATCCAAATTG
AAATTGGCTCTGAAGCTTCGGAGCTGCTCATCGAACGTGGTTGTTATTCA
GCTTCAAAGATTGTTGGGGGGGAACTAAAAGGGAGTTTTTAAGTGAAGGA
AAGTATGGTCAGGAAACATTTGTCAAAAGTAGtaaacaaaactgaaaaaa
acggTTTACCTCCGAATACGATTGATTTTCTCGCTAAGGTCAACGCCCAA
TGACCAAATTGAACGTATAGAGAAAAATTGTTTGGAAATTTAGTCACTCC
CTGTATAAATTCAGTGACTTTGTCACTTATTccatagactggagtcgttt
ataatgcgtgaaATACTAATAATACGGGATATATTTCGTATAAACGACTT
GAAGAATCcagtgttccagccttatagataccccggctagctac
Run BLAST on NCBI

protein sequence of TCONS_00016741-protein

>TCONS_00016741-protein ID=TCONS_00016741-protein|Name=TCONS_00016741-protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp
MLLRKKASLLKKKRKKKKANRKKVRKIKLMKRKRKKEEIRFKSDWEACLK
AVEKRTLLADVTRASSRLGKSFSWTKANKPRWWPCNVPFQSPHGKIKTPV
DQIDMVMRSFHEHQMLKIVKKHSTMVADFHGQISALKSYASSFSDATKLA
ACCCWFQMHRKLTNLSVCDIDLKSRSLTLSTDKEPVAFESVNSALSFHFL
GTKDHEDFFGNLSLALAVNEMQQLLDCITSGKFGLGPKRFQDWLDAYDKD
TLEKSLLASVSKPKDPKLRLTMTLGHHDII
Run BLAST on NCBI

transcript from alignment at sc0000248:33884..39935-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016741 ID=TCONS_00016741|Name=TCONS_00016741|organism=Clytia hemisphaerica|type=transcript|length=6052bp|location=Sequence derived from alignment at sc0000248:33884..39935- (Clytia hemisphaerica)
CTTTAGAATAAAAAAAATGAACACCGACAACGATCAGAACAACAGCCATG
TCAACGACAATGAAAATAACAACGTTAACGAAGAAAATAGAAAGAGGAGG
ATCGGCTCCCATGGCCGTTTCAAAATGAATAAGGTAGATTTGACTTGAGT
CGTTATTAATTCATTCATTTTAAGAACTGTTGAATCAGAACACAAAACCA
ACTTTCTTTTTCGTTTTAGACCAGTTTTGATAAAAATCCTGTCAGCAGAA
AAAAAACTGAAAAAGGAAAATTGGCTTCAATCAAGAGCAAGGTATTTTAA
CTATCACGTCCCACAAAAAGGTCGACTTTAAAACTCCCACTCCCACCGCT
TTTCTTAATTTTCTGGAAGGTAGAAATCATGAGAGATTTTGCTATAGCTT
GAAAAATATAGCGCTAATTTTTAAAAGATCATATTGGACCGACCCTCTTC
TAGACTAGATAAAAAGCGTATTAAGTTATAAACTTGTGGTGTTTGATTTT
AGTAATTTAAAGGAGTGCTTAATTTCTACATAATTTTAATGCTTTTTGCT
AGGTTGTACAATTACGTAATGTCTGCAAGACACCAATTGCTGTTTTAGCC
TACAAGGCAGATGGAAACATAAAAAGCTATGGTAATGAATTTAAGAATCT
GGCCAAAGTGAATTTTTCATCAATTTCTAAATTGCATAAAATACTAATTT
CTACCTGATTTAGCTTACTAAAATATGTGTAATGTGAAATAAAGTTCTCT
GTTCAGTAAATTTATCTTTCAATTAAATGAAAATGGACGTCAATTATTAG
GATCGACGAAAGGAATGAGGATGTTTGCTCGAGATCCCTTAGTCCTTGAG
AAATTCAAGCAGGCCATGGAGATTGATGCTGGTAAGTTGATTCTTATAGC
TCTTCGAAATACAAGTTATAGTTTTGTCTTTTGAAATGGTATTTAACTAA
AGATATGCTGCCGTAAACATATTGGAAGTTTAGAGGGACTGAAATGGGTG
AAACATTACTTAAAAATATACTAAAAAGTTGTAATTTTTCACATGATTTT
CTTTTGTTAAATTTGGCGAGGATTTAGTTTGGAGAGTGATCGGTTTTTGA
AATTTCTGCGGGGATTTATTCGCCAAAATTAAACCACTTAATAAGGTATA
TGAGAATGAAGTGCATTAAATAAGTATTATCAATAATAATACAAGCGTAG
ATATTATTTACATCTTGGTTAGCGATTTTTTTATTCTGTCTTGTTCAAGC
TGAGGAAGAAAGCGAGTCTTCTGAAGAAGAAGAGGAAGAAGAAGAAAGCG
AATCGGAAGAAAGTGAGGAAGATCAAATTAATGAAAAGAAAAAGAAAAAA
AGAAGAGATCCGATTTAAAAGCGATTGGGAGGCATGTCTTAAAGCTGTTG
AAAAGAGAACTCTGCTTGCAGATGTAACCAGAGCTTCATCACGTGGGTAT
TCGTTTCTGCGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGCGAATCG
GAAGAAAGTGAGGAAGATCAAATTAACGAAAAGAAAAAGAAAAAAGAAGA
TATACGATTCAAAAGCGATTGGGAGGCGTGTCTCAAAGCCGTTGAAAAGA
GAACTCTGCTTGCAGATGTAACCAGAGCTTCATCACGTGGGTATTCGTTT
CTGCGTTTTTTAGGAATATCATTAGACTGTTTTTACTTTGCACAACTGCT
TGAGCTGTACATATCAAACAGGTTATGCCCCTGTATTTAGATTCTTAAGT
TAAGAGACATAGTATGAAAATATTACTTTCTCAGGTCTTGGAAAAAGTTT
TAGCTGGACGAAAGCCAACAAACCCAGGTGGTGGCCCTGCAACGTCCCGT
TCCAGTCACCCCATGGAAAAATCAAAACACCAGTGGACCAGATCGACATG
GTGATGCGTTCGTTCCACGAACATCAAATGCTTAAGATTGTTGTAAGTAA
TTCATGGTGAAATAAAACGTTAATAATATATATTGTGCTGAACCTGAGAC
ACTGAAACATTCCTGGAAATAAGCAATCTGCACAGACTTTAGACATCCTT
CTTGAATTGTTTAGTCTATATCAAGCCCGTGTTTTATAGGTTATCAGCCT
TATACTTTTTCTCTTTTATCTAGAAAAAGCATTCGACAATGGTAGCCGAC
TTTCACGGACAGATTAGTGCATTGAAATCATACGCTTCCTCCTTTTCCGA
TGCCACAAAGTTAGCTGCGTGTTGCTGTTGGTTCCAAATGCACCGGAAAC
TGACTAATTTGTCTGTTTGTGATATCGATTTAAAGTAAAGTATTACTTCG
AATAAACGCCCCGGTGTTTATTCTTTCTATTTTTTAGATTTTATGAGGGA
CGTTTAAAAAAGGGGGCATCTATTAAATAATCTTTAAACAAGCTCACTTT
AATAGAGTGAGTGAATACCTTTTTTGCCTTTTCGTTTCGTTCAGTTCAAA
TATGTCATTTTAGAAATGTTAGAATGGATCAAAATTAGTTTTGGTGCTTG
AAAGGATTACAATAATGACATCTCTAATTATGGAAAAAGGAACTTGAGGT
GAATGATAAAATCAACCATAAATTCGACTATGCTTTCTTTATTTTTCAGA
AGTCGGTCCCTTACGTTATCGACTGATAAAGAACCGGTAGCATTCGAAAG
TGTTAATTCTGCGTTGAGCTTCCACTTCCTCGGCACGAAAGATCACGAGG
ATTTCTTTGGGAACCTCTCTTTGGCACTTGCTGTCAATGAAATGCAGCAG
TTACTTGATTGTGTGAGTATTATGTGTCAAGGTTATCTGAAGATTTAAAT
TCAAGTAAAAAACTAAAGACTTTTCCAAAGGTTTCCTTCTTCCCAAGAAG
ATTTTTGCATTTTCCAGTAAACCCATTTCTGTTTCTCTTTCTGTTTCAAA
GATTACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGC
TCGATGCCTATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCTGTA
TCGAAACCTAAAGGTATACAAAGATACTCTTTTGCTATTATGGCTTTTCG
GTATATTCCAAAGGCTGATTTTCCAGTCAAAATATTAGCTTTAAAGCTAT
ACAGATTTGTACACATTTTCGACTTTAAAGAACAGATACATTAACATTAC
ATTAACATTGCTTCCTTAAAGGTTTTTTATGTATTCAACACACTTTATAT
TGTAAAATCTTTGAAACTGAATTTAATTTAATTTAATTAAGTCGAACTAA
GCGGCTATAGATATCCTACTGAAAATAAATTTTATTCTTGTATCATATTA
TATTGTATTATATAGACCCAAAACTACGACTGACCATGACATTGGGACAT
CACGACATAATATAAAACTACGATAAGACAGAACGACTGACAAACTCACA
AACTCAGGACAGGTCTTCCTCAACGTACTTTCTGTGCCGATTGATTATTT
TTAAACTCGACTATACTCTTCTTAAATTTGGAAAGTGGACTTGAAGTTTC
AAAATTGAATTCAAAATTACGTCTTTTCCGTCTTTTACTTACTTTTATTT
GAAAGCTTTGAGAAATTTATTCAATACTGAATATTTCAAAGTTAAAAAGT
CAAAACATGATGATGTGGTGTTGCTTTCTAAATCATTTGATTTCTTTTAG
TAATGGTGAATTTGTTGGGTATTGCTTTGAGCCTCAACAAAAATTTAAAG
ATTGTAGATGAAGAAGGCGTGAGTGTTGTTTGCGTCGATGATACCTCGTT
ATGTACGATGCCATTCATACTCACTTCTGGCGGATGTTTATATTTGGCTG
CCTTTGAGGACTATGATCCAGAGAGTTGTCGCAGCCACAACATGTACTGT
TATGGTAGAGAGGATGAGGAACAGGTAGTCTGCCGCAATTGTCACCTTGC
CTATCACTTACCCTGTATTCGATGGCAAGATACATGTGGCTGCGATAAAA
TCGAGAACATAAAATTACGGTACTTTTTTACTCATCATTCATATTATTGT
TGGTCAAGACGTTAATCTTACCCTTTACGAGGTGTTTGGCTAAACAGAAG
ACTGAANTGTTGGTCAAGACGTTAATCTTGCCCTTTACAAGGTGTCCGGC
TAAACAGAAGACTGAATTTGATCAAAAATATCCAAGAAATTTATTTATGG
ACCCTGAATATCTCGTTTCCGAGATTTTGAAATTGTAAATAAATTTTTAG
GTAAACGGCGCTCTATACAATCTATAAAAATCACAAGGTAATTTTCTGTA
AGCTATCAAGTTTAATCGGTTTAAATAACCCGCGAGTTTAATCTATTCTG
GCTAGCGAGTATAGTATATTTAGGAAGATTGGAGAAACGTCTCTAACACA
ACCATTCAATACAGTACATACTAACCTTTATGGCATTCTTTTTTTTTTAG
CTTAATTGATATGTTCCACGAACGCTCGATCAACACCTTTTTGCGTCTGA
TCTACAAAAGTACCGACAAAATTATAGTAAGCCTCATTTTTTAACTATAA
ATTCAATTATTGAGTTATTCTTCAAAGGGAAGGATCATGGAATTTATTGA
AACCAATAGAAAATTTTCATAATCGTTTATGTTTTTACCTAGAAATTTTC
TTCGAATTTGTTGGATCAGAGCCAGAGATCGGCAAGATCGGAGCTGGTTG
TTCGCCTTCTTTCGGAGGGTAAATGTGACGCACTGATGTTGATGAACACC
TTCAGTAAACAAATCCCTCAGCAGATAGTAAGAAGAATTTTAATTATATT
TTTCATCAGACACTGTATCCGTATTTTTTCAGAGAAGAAGAGCTAAGCAA
GCAAGAGCGTTTGCTGTAAAGCTCTGGAGTGAAGTGCTACCAAATCTATT
GCAAAGCTTAATTATATTTCTTATTTCCAGGTCCGCACTCTAACCTCGGT
ATTGATGGCATCGCCGGTGTTGGAGGGAAATCGTTCATTTCAAGAACGAA
ATCATCAAAGGGTCATTACTGAATTCCTTGTGCCAGAAGTGAGTATTTTG
AGCCTCGCTTCTGCTCGTTACTCCTTTAAAAACTGAAATTACGCATTTGA
TATTCATAAACATCCTTGAAAGAGAATTCCAAAACGTACTTAAAGAAAAA
CCATAGTCATTATAAAAAACTCCGGTCTGGCAATGTATTGTGTTTAGCTT
TTTGTGCAATTTTCTATTGTTACAAACAAAAAGCAAGTTGCGATTTGCAT
ACTTTTTGATCACGTTACCAAAATATCCTCTTGGGATTGGTCTATTTTCT
AATCACATGATCAAAAAGTTTGCAAAATAAATCAATTTTGGTACGTAAGC
TCCATCTTTTAACAATAAGAAGAGACAAAAGCCTTCCACACCAGTGTTTT
TATAATGACTATGGAAAAATGAACAGTTCAGGGACAAAACTTTACTGTCT
TTCAAGGCTCCCTAAATTTTTATCCCATGAAATAAAAAAAGGAACCATTA
TACACGTAGCTTTTTTAATGAGAGAATGTTAAGAAACAATTTGTCCCCAC
GCCTTTATAATTGATAATTCAGTGTTTTTTGTTTTGTCTTTTTCGCTTGG
AAATTATCTTTGACGCCATGTTTTCACGTTTAGGTATTGACGTATTTGAT
CCAAATTGAAATTGGCTCTGAAGCTTCGGAGCTGCTCATCGAACGTGGTT
GTTATTCAGCTTCAAAGATTGTTGGGGGGGAACTAAAAGGGAGTTTTTAA
GTGAAGGAAAGTATGGTCAGGAAACATTTGTCAAAAGTAGTAAACAAAAC
TGAAAAAAACGGTTTACCTCCGAATACGATTGATTTTCTCGCTAAGGTCA
ACGCCCAATGACCAAATTGAACGTATAGAGAAAAATTGTTTGGAAATTTA
GTCACTCCCTGTATAAATTCAGTGACTTTGTCACTTATTCCATAGACTGG
AGTCGTTTATAATGCGTGAAATACTAATAATACGGGATATATTTCGTATA
AACGACTTGAAGAATCCAGTGTTCCAGCCTTATAGATACCCCGGCTAGCT
AC

Coding sequence (CDS) from alignment at sc0000248:33884..39935-

>TCONS_00016741 ID=TCONS_00016741|Name=TCONS_00016741|organism=Clytia hemisphaerica|type=CDS|length=6744bp|location=Sequence derived from alignment at sc0000248:33884..39935- (Clytia hemisphaerica)
ACCCAAAACTACGACTGACCATGACATTGGGACATCACGACATAATATAA
ATTACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGCT
CGATGCCTATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCTGTAT
CGAAACCTAAAGAAGTCGGTCCCTTACGTTATCGACTGATAAAGAACCGG
TAGCATTCGAAAGTGTTAATTCTGCGTTGAGCTTCCACTTCCTCGGCACG
AAAGATCACGAGGATTTCTTTGGGAACCTCTCTTTGGCACTTGCTGTCAA
TGAAATGCAGCAGTTACTTGATTGTAAAAAGCATTCGACAATGGTAGCCG
ACTTTCACGGACAGATTAGTGCATTGAAATCATACGCTTCCTCCTTTTCC
GATGCCACAAAGTTAGCTGCGTGTTGCTGTTGGTTCCAAATGCACCGGAA
ACTGACTAATTTGTCTGTTTGTGATATCGATTTAAAGTCTTGGAAAAAGT
TTTAGCTGGACGAAAGCCAACAAACCCAGGTGGTGGCCCTGCAACGTCCC
GTTCCAGTCACCCCATGGAAAAATCAAAACACCAGTGGACCAGATCGACA
TGGTGATGCGTTCGTTCCACGAACATCAAATGCTTAAGATTGTTGCGTGT
CTCAAAGCCGTTGAAAAGAGAACTCTGCTTGCAGATGTAACCAGAGCTTC
ATCACCTGAGGAAGAAAGCGAGTCTTCTGAAGAAGAAGAGGAAGAAGAAG
AAAGCGAATCGGAAGAAAGTGAGGAAGATCAAATTAATGAAAAGAAAAAG
AAAAAAAGAAGAGATCCGATTTAAAAGCGATTGGGAGATGCTGACCCAAA
ACTACGACTGACCATGACATTGGGACATCACGACATAATATAAATTACTA
GCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGCTCGATGCC
TATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCTGTATCGAAACC
TAAAGAAGTCGGTCCCTTACGTTATCGACTGATAAAGAACCGGTAGCATT
CGAAAGTGTTAATTCTGCGTTGAGCTTCCACTTCCTCGGCACGAAAGATC
ACGAGGATTTCTTTGGGAACCTCTCTTTGGCACTTGCTGTCAATGAAATG
CAGCAGTTACTTGATTGTAAAAAGCATTCGACAATGGTAGCCGACTTTCA
CGGACAGATTAGTGCATTGAAATCATACGCTTCCTCCTTTTCCGATGCCA
CAAAGTTAGCTGCGTGTTGCTGTTGGTTCCAAATGCACCGGAAACTGACT
AATTTGTCTGTTTGTGATATCGATTTAAAGTCTTGGAAAAAGTTTTAGCT
GGACGAAAGCCAACAAACCCAGGTGGTGGCCCTGCAACGTCCCGTTCCAG
TCACCCCATGGAAAAATCAAAACACCAGTGGACCAGATCGACATGGTGAT
GCGTTCGTTCCACGAACATCAAATGCTTAAGATTGTTGCGTGTCTCAAAG
CCGTTGAAAAGAGAACTCTGCTTGCAGATGTAACCAGAGCTTCATCACCT
GAGGAAGAAAGCGAGTCTTCTGAAGAAGAAGAGGAAGAAGAAGAAAGCGA
ATCGGAAGAAAGTGAGGAAGATCAAATTAATGAAAAGAAAAAGAAAAAAA
GAAGAGATCCGATTTAAAAGCGATTGGGAGATGCTGACCCAAAACTACGA
CTGACCATGACATTGGGACATCACGACATAATATAAATTACTAGCGGAAA
GTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGCTCGATGCCTATGACA
AAGACACCCTTGAAAAATCTCTTTTGGCTTCTGTATCGAAACCTAAAGAA
GTCGGTCCCTTACGTTATCGACTGATAAAGAACCGGTAGCATTCGAAAGT
GTTAATTCTGCGTTGAGCTTCCACTTCCTCGGCACGAAAGATCACGAGGA
TTTCTTTGGGAACCTCTCTTTGGCACTTGCTGTCAATGAAATGCAGCAGT
TACTTGATTGTAAAAAGCATTCGACAATGGTAGCCGACTTTCACGGACAG
ATTAGTGCATTGAAATCATACGCTTCCTCCTTTTCCGATGCCACAAAGTT
AGCTGCGTGTTGCTGTTGGTTCCAAATGCACCGGAAACTGACTAATTTGT
CTGTTTGTGATATCGATTTAAAGTCTTGGAAAAAGTTTTAGCTGGACGAA
AGCCAACAAACCCAGGTGGTGGCCCTGCAACGTCCCGTTCCAGTCACCCC
ATGGAAAAATCAAAACACCAGTGGACCAGATCGACATGGTGATGCGTTCG
TTCCACGAACATCAAATGCTTAAGATTGTTGCGTGTCTCAAAGCCGTTGA
AAAGAGAACTCTGCTTGCAGATGTAACCAGAGCTTCATCACCTGAGGAAG
AAAGCGAGTCTTCTGAAGAAGAAGAGGAAGAAGAAGAAAGCGAATCGGAA
GAAAGTGAGGAAGATCAAATTAATGAAAAGAAAAAGAAAAAAAGAAGAGA
TCCGATTTAAAAGCGATTGGGAGATGCTGACCCAAAACTACGACTGACCA
TGACATTGGGACATCACGACATAATATAAATTACTAGCGGAAAGTTTGGC
TTAGGTCCGAAGAGATTCCAAGATTGGCTCGATGCCTATGACAAAGACAC
CCTTGAAAAATCTCTTTTGGCTTCTGTATCGAAACCTAAAGAAGTCGGTC
CCTTACGTTATCGACTGATAAAGAACCGGTAGCATTCGAAAGTGTTAATT
CTGCGTTGAGCTTCCACTTCCTCGGCACGAAAGATCACGAGGATTTCTTT
GGGAACCTCTCTTTGGCACTTGCTGTCAATGAAATGCAGCAGTTACTTGA
TTGTAAAAAGCATTCGACAATGGTAGCCGACTTTCACGGACAGATTAGTG
CATTGAAATCATACGCTTCCTCCTTTTCCGATGCCACAAAGTTAGCTGCG
TGTTGCTGTTGGTTCCAAATGCACCGGAAACTGACTAATTTGTCTGTTTG
TGATATCGATTTAAAGTCTTGGAAAAAGTTTTAGCTGGACGAAAGCCAAC
AAACCCAGGTGGTGGCCCTGCAACGTCCCGTTCCAGTCACCCCATGGAAA
AATCAAAACACCAGTGGACCAGATCGACATGGTGATGCGTTCGTTCCACG
AACATCAAATGCTTAAGATTGTTGCGTGTCTCAAAGCCGTTGAAAAGAGA
ACTCTGCTTGCAGATGTAACCAGAGCTTCATCACCTGAGGAAGAAAGCGA
GTCTTCTGAAGAAGAAGAGGAAGAAGAAGAAAGCGAATCGGAAGAAAGTG
AGGAAGATCAAATTAATGAAAAGAAAAAGAAAAAAAGAAGAGATCCGATT
TAAAAGCGATTGGGAGATGCTGACCCAAAACTACGACTGACCATGACATT
GGGACATCACGACATAATATAAATTACTAGCGGAAAGTTTGGCTTAGGTC
CGAAGAGATTCCAAGATTGGCTCGATGCCTATGACAAAGACACCCTTGAA
AAATCTCTTTTGGCTTCTGTATCGAAACCTAAAGAAGTCGGTCCCTTACG
TTATCGACTGATAAAGAACCGGTAGCATTCGAAAGTGTTAATTCTGCGTT
GAGCTTCCACTTCCTCGGCACGAAAGATCACGAGGATTTCTTTGGGAACC
TCTCTTTGGCACTTGCTGTCAATGAAATGCAGCAGTTACTTGATTGTAAA
AAGCATTCGACAATGGTAGCCGACTTTCACGGACAGATTAGTGCATTGAA
ATCATACGCTTCCTCCTTTTCCGATGCCACAAAGTTAGCTGCGTGTTGCT
GTTGGTTCCAAATGCACCGGAAACTGACTAATTTGTCTGTTTGTGATATC
GATTTAAAGTCTTGGAAAAAGTTTTAGCTGGACGAAAGCCAACAAACCCA
GGTGGTGGCCCTGCAACGTCCCGTTCCAGTCACCCCATGGAAAAATCAAA
ACACCAGTGGACCAGATCGACATGGTGATGCGTTCGTTCCACGAACATCA
AATGCTTAAGATTGTTGCGTGTCTCAAAGCCGTTGAAAAGAGAACTCTGC
TTGCAGATGTAACCAGAGCTTCATCACCTGAGGAAGAAAGCGAGTCTTCT
GAAGAAGAAGAGGAAGAAGAAGAAAGCGAATCGGAAGAAAGTGAGGAAGA
TCAAATTAATGAAAAGAAAAAGAAAAAAAGAAGAGATCCGATTTAAAAGC
GATTGGGAGATGCTGACCCAAAACTACGACTGACCATGACATTGGGACAT
CACGACATAATATAAATTACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAG
ATTCCAAGATTGGCTCGATGCCTATGACAAAGACACCCTTGAAAAATCTC
TTTTGGCTTCTGTATCGAAACCTAAAGAAGTCGGTCCCTTACGTTATCGA
CTGATAAAGAACCGGTAGCATTCGAAAGTGTTAATTCTGCGTTGAGCTTC
CACTTCCTCGGCACGAAAGATCACGAGGATTTCTTTGGGAACCTCTCTTT
GGCACTTGCTGTCAATGAAATGCAGCAGTTACTTGATTGTAAAAAGCATT
CGACAATGGTAGCCGACTTTCACGGACAGATTAGTGCATTGAAATCATAC
GCTTCCTCCTTTTCCGATGCCACAAAGTTAGCTGCGTGTTGCTGTTGGTT
CCAAATGCACCGGAAACTGACTAATTTGTCTGTTTGTGATATCGATTTAA
AGTCTTGGAAAAAGTTTTAGCTGGACGAAAGCCAACAAACCCAGGTGGTG
GCCCTGCAACGTCCCGTTCCAGTCACCCCATGGAAAAATCAAAACACCAG
TGGACCAGATCGACATGGTGATGCGTTCGTTCCACGAACATCAAATGCTT
AAGATTGTTGCGTGTCTCAAAGCCGTTGAAAAGAGAACTCTGCTTGCAGA
TGTAACCAGAGCTTCATCACCTGAGGAAGAAAGCGAGTCTTCTGAAGAAG
AAGAGGAAGAAGAAGAAAGCGAATCGGAAGAAAGTGAGGAAGATCAAATT
AATGAAAAGAAAAAGAAAAAAAGAAGAGATCCGATTTAAAAGCGATTGGG
AGATGCTGACCCAAAACTACGACTGACCATGACATTGGGACATCACGACA
TAATATAAATTACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAA
GATTGGCTCGATGCCTATGACAAAGACACCCTTGAAAAATCTCTTTTGGC
TTCTGTATCGAAACCTAAAGAAGTCGGTCCCTTACGTTATCGACTGATAA
AGAACCGGTAGCATTCGAAAGTGTTAATTCTGCGTTGAGCTTCCACTTCC
TCGGCACGAAAGATCACGAGGATTTCTTTGGGAACCTCTCTTTGGCACTT
GCTGTCAATGAAATGCAGCAGTTACTTGATTGTAAAAAGCATTCGACAAT
GGTAGCCGACTTTCACGGACAGATTAGTGCATTGAAATCATACGCTTCCT
CCTTTTCCGATGCCACAAAGTTAGCTGCGTGTTGCTGTTGGTTCCAAATG
CACCGGAAACTGACTAATTTGTCTGTTTGTGATATCGATTTAAAGTCTTG
GAAAAAGTTTTAGCTGGACGAAAGCCAACAAACCCAGGTGGTGGCCCTGC
AACGTCCCGTTCCAGTCACCCCATGGAAAAATCAAAACACCAGTGGACCA
GATCGACATGGTGATGCGTTCGTTCCACGAACATCAAATGCTTAAGATTG
TTGCGTGTCTCAAAGCCGTTGAAAAGAGAACTCTGCTTGCAGATGTAACC
AGAGCTTCATCACCTGAGGAAGAAAGCGAGTCTTCTGAAGAAGAAGAGGA
AGAAGAAGAAAGCGAATCGGAAGAAAGTGAGGAAGATCAAATTAATGAAA
AGAAAAAGAAAAAAAGAAGAGATCCGATTTAAAAGCGATTGGGAGATGCT
GACCCAAAACTACGACTGACCATGACATTGGGACATCACGACATAATATA
AATTACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGC
TCGATGCCTATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCTGTA
TCGAAACCTAAAGAAGTCGGTCCCTTACGTTATCGACTGATAAAGAACCG
GTAGCATTCGAAAGTGTTAATTCTGCGTTGAGCTTCCACTTCCTCGGCAC
GAAAGATCACGAGGATTTCTTTGGGAACCTCTCTTTGGCACTTGCTGTCA
ATGAAATGCAGCAGTTACTTGATTGTAAAAAGCATTCGACAATGGTAGCC
GACTTTCACGGACAGATTAGTGCATTGAAATCATACGCTTCCTCCTTTTC
CGATGCCACAAAGTTAGCTGCGTGTTGCTGTTGGTTCCAAATGCACCGGA
AACTGACTAATTTGTCTGTTTGTGATATCGATTTAAAGTCTTGGAAAAAG
TTTTAGCTGGACGAAAGCCAACAAACCCAGGTGGTGGCCCTGCAACGTCC
CGTTCCAGTCACCCCATGGAAAAATCAAAACACCAGTGGACCAGATCGAC
ATGGTGATGCGTTCGTTCCACGAACATCAAATGCTTAAGATTGTTGCGTG
TCTCAAAGCCGTTGAAAAGAGAACTCTGCTTGCAGATGTAACCAGAGCTT
CATCACCTGAGGAAGAAAGCGAGTCTTCTGAAGAAGAAGAGGAAGAAGAA
GAAAGCGAATCGGAAGAAAGTGAGGAAGATCAAATTAATGAAAAGAAAAA
GAAAAAAAGAAGAGATCCGATTTAAAAGCGATTGGGAGATGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009359XLOC_009359Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016741-exon-sc0000248-1575043694:39803..39935TCONS_00016741-exon-sc0000248-1575043694:39803..39935Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:39645..39716TCONS_00016741-exon-sc0000248-1575043694:39645..39716Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:39305..39383TCONS_00016741-exon-sc0000248-1575043694:39305..39383Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:39055..39135TCONS_00016741-exon-sc0000248-1575043694:39055..39135Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:38555..38686TCONS_00016741-exon-sc0000248-1575043694:38555..38686Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:38250..38310TCONS_00016741-exon-sc0000248-1575043694:38250..38310Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:37944..38101TCONS_00016741-exon-sc0000248-1575043694:37944..38101Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:37602..37762TCONS_00016741-exon-sc0000248-1575043694:37602..37762Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:37124..37286TCONS_00016741-exon-sc0000248-1575043694:37124..37286Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:36873..36984TCONS_00016741-exon-sc0000248-1575043694:36873..36984Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:35917..36570TCONS_00016741-exon-sc0000248-1575043694:35917..36570Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:35410..35485TCONS_00016741-exon-sc0000248-1575043694:35410..35485Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:35159..35293TCONS_00016741-exon-sc0000248-1575043694:35159..35293Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:34898..35005TCONS_00016741-exon-sc0000248-1575043694:34898..35005Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1575043694:33884..34302TCONS_00016741-exon-sc0000248-1575043694:33884..34302Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:39803..39935TCONS_00016741-exon-sc0000248-1510915933:39803..39935Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:39645..39716TCONS_00016741-exon-sc0000248-1510915933:39645..39716Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:39305..39383TCONS_00016741-exon-sc0000248-1510915933:39305..39383Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:39055..39135TCONS_00016741-exon-sc0000248-1510915933:39055..39135Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:38555..38686TCONS_00016741-exon-sc0000248-1510915933:38555..38686Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:38250..38310TCONS_00016741-exon-sc0000248-1510915933:38250..38310Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:37944..38101TCONS_00016741-exon-sc0000248-1510915933:37944..38101Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:37602..37762TCONS_00016741-exon-sc0000248-1510915933:37602..37762Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:37124..37286TCONS_00016741-exon-sc0000248-1510915933:37124..37286Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:36873..36984TCONS_00016741-exon-sc0000248-1510915933:36873..36984Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:35917..36570TCONS_00016741-exon-sc0000248-1510915933:35917..36570Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:35410..35485TCONS_00016741-exon-sc0000248-1510915933:35410..35485Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:35159..35293TCONS_00016741-exon-sc0000248-1510915933:35159..35293Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:34898..35005TCONS_00016741-exon-sc0000248-1510915933:34898..35005Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1510915933:33884..34302TCONS_00016741-exon-sc0000248-1510915933:33884..34302Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:39803..39935TCONS_00016741-exon-sc0000248-1491911889:39803..39935Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:39645..39716TCONS_00016741-exon-sc0000248-1491911889:39645..39716Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:39305..39383TCONS_00016741-exon-sc0000248-1491911889:39305..39383Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:39055..39135TCONS_00016741-exon-sc0000248-1491911889:39055..39135Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:38555..38686TCONS_00016741-exon-sc0000248-1491911889:38555..38686Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:38250..38310TCONS_00016741-exon-sc0000248-1491911889:38250..38310Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:37944..38101TCONS_00016741-exon-sc0000248-1491911889:37944..38101Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:37602..37762TCONS_00016741-exon-sc0000248-1491911889:37602..37762Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:37124..37286TCONS_00016741-exon-sc0000248-1491911889:37124..37286Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:36873..36984TCONS_00016741-exon-sc0000248-1491911889:36873..36984Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:35917..36570TCONS_00016741-exon-sc0000248-1491911889:35917..36570Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:35410..35485TCONS_00016741-exon-sc0000248-1491911889:35410..35485Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:35159..35293TCONS_00016741-exon-sc0000248-1491911889:35159..35293Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:34898..35005TCONS_00016741-exon-sc0000248-1491911889:34898..35005Clytia hemisphaericaexon
TCONS_00016741-exon-sc0000248-1491911889:33884..34302TCONS_00016741-exon-sc0000248-1491911889:33884..34302Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016741-proteinTCONS_00016741-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:33884..39935 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0527943	0.0979522	0.0597763	0	0	0.150146	0.0678754	0.254176	0	0.220426	0	0.105482	0.561789	0	3.52872e-06	2.00879e-10	0	0	0	9.54831e-10	0.204178	0	0.170303	0	0.113366	0.447305	0	0.258285	0.0753958	0.0959796
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016741 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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