TCONS_00016998 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016998
Unique NameTCONS_00016998
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length126

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016998 ID=TCONS_00016998|Name=TCONS_00016998|organism=Clytia hemisphaerica|type=transcript|length=126bp
ACAACCCTGGAAACTCCTCTTTGTTTGGTCCATCGTTTGATGAGACATTA
GCTAAAGACATTTCAGTACGTGGTTAGGCGAAATCTGCATTTACTGCATT
AAAGAATGAGAATGCAAAACCTGCAC
Run BLAST on NCBI

transcript from alignment at sc0000255:299544..299669

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016998 ID=TCONS_00016998|Name=TCONS_00016998|organism=Clytia hemisphaerica|type=transcript|length=126bp|location=Sequence derived from alignment at sc0000255:299544..299669 (Clytia hemisphaerica)
GTGCAGGTTTTGCATTCTCATTCTTTAATGCAGTAAATGCAGATTTCGCC
TAACCACGTACTGAAATGTCTTTAGCTAATGTCTCATCAAACGATGGACC
AAACAAAGAGGAGTTTCCAGGGTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009520XLOC_009520Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016998-exon-sc0000255-1491911889:299544..299669TCONS_00016998-exon-sc0000255-1491911889:299544..299669Clytia hemisphaericaexon
TCONS_00016998-exon-sc0000255-1510915933:299544..299669TCONS_00016998-exon-sc0000255-1510915933:299544..299669Clytia hemisphaericaexon
TCONS_00016998-exon-sc0000255-1575043694:299544..299669TCONS_00016998-exon-sc0000255-1575043694:299544..299669Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000255supercontigsc0000255:299544..299669 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016998 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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