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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017318 ID=TCONS_00017318|Name=TCONS_00017318|organism=Clytia hemisphaerica|type=transcript|length=787bp
tatagGATAATTATAAATGGAAATGAATAAATAATGGGCAAAGCATTTTG
GCAAAACaaacataaattatttttcatggCCACACTAATGTTGGCAGTTG
GTTATGTGCTTCTCTCAAAGTCATCCAAACAAGCTAGTAGCAACAAACTC
TTAACGAAGGATGAGACACCATCCTTTGTTAAGATGTCGTCATGCAAACA
GAACAACAATGTTTCgattttttatatcaaaatacaaaaaacagGTTCTA
GTACCATAAAAAGCATGTTGCTGAACTAtggattgaagaaaaaaatgaaa
atctgcatGGACAATACCGACCTACATCATATGAACTTTCCGTACCAGAT
TGACGAATCAAAACTGGTCAAGAAACCGAATGAGAAATGTCAATTGGTAG
CTGATGAACTAATCTTCCATGAAAAACAAGGTATACTTCTTgacaataga
tcttatcggagtttttgatttttctaaaaaagcgatgcattgtgggattc
tTTCGGGGGTATTATAATAGAAATCTCTTAataattcctcgagggaattc
tattgtaatacccccgaaacaatcccacaatgcatcgcttatttagaaaa
ataaaaaactccggtAAAGTCTATTTTAAGGAACAAATTTTGGAACttaa
agttttgtttttctcGATCCTTTTGCCCTACAGCCATCCAAGGATACTTC
TTTTTGTTCCGGCTTGATGCTATGAGCATTTCGGCTCAGACAGAACCCcc
tgggggtactaggtttgcgaggtgacgggtatgtccg Run BLAST on NCBI transcript from alignment at sc0000264:358001..359155- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017318 ID=TCONS_00017318|Name=TCONS_00017318|organism=Clytia hemisphaerica|type=transcript|length=1155bp|location=Sequence derived from alignment at sc0000264:358001..359155- (Clytia hemisphaerica)
TATAGGATAATTATAAATGGAAATGAATAAATAATGGGCAAAGCATTTTG
GCAAAACAAACATAAATTATTTTTCATGGCCACACTAATGTTGGCAGTTG
GTTATGTGCTTCTCTCAAAGTCATCCAAACAAGCTAGTAGCAACAAACTC
TTAACGAAGGATGAGACACCATCCTTTGTTAAGATGTCGTCATGCAAACA
GAACAACAATGTTTCGATTTTTTATATCAAAATACAAAAAACAGGTAAAA
TGTTATTTCATAACTTTGTTTCTTTTCTAAAAGTTACTGCACATGTAATT
TCTATTTTTACAATAATGGCAAATAACAAACCCTTTTTAAATATTTTTCT
TTACCTATAATTATGCACTACGTAATACTCGTACCGTAAGGTCAACAATA
TTCCATAAAATCTCTCTTTCTGTCAATATTTTTCTTATTCATGATATGCA
CCATTGCAATGTCTTTTGACATTACATCACAGACCCAATAGCTGATTGAT
TTAAGTGACGTAATATCTGACAATACGTCACTTTCAACCAATCAGCTATT
GGGTCCGTGGAAGACATTTCAATGGTGCATATCATGAATAATGAAAATAT
CACCCTTTTCAGGTTCTAGTACCATAAAAAGCATGTTGCTGAACTATGGA
TTGAAGAAAAAAATGAAAATCTGCATGGACAATACCGACCTACATCATAT
GAACTTTCCGTACCAGATTGACGAATCAAAACTGGTCAAGAAACCGAATG
AGAAATGTCAATTGGTAGCTGATGAACTAATCTTCCATGAAAAACAAGGT
ATACTTCTTGACAATAGATCTTATCGGAGTTTTTGATTTTTCTAAAAAAG
CGATGCATTGTGGGATTCTTTCGGGGGTATTATAATAGAAATCTCTTAAT
AATTCCTCGAGGGAATTCTATTGTAATACCCCCGAAACAATCCCACAATG
CATCGCTTATTTAGAAAAATAAAAAACTCCGGTAAAGTCTATTTTAAGGA
ACAAATTTTGGAACTTAAAGTTTTGTTTTTCTCGATCCTTTTGCCCTACA
GCCATCCAAGGATACTTCTTTTTGTTCCGGCTTGATGCTATGAGCATTTC
GGCTCAGACAGAACCCCCTGGGGGTACTAGGTTTGCGAGGTGACGGGTAT
GTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017318-exon-sc0000264-1575043694:358912..359155 | TCONS_00017318-exon-sc0000264-1575043694:358912..359155 | Clytia hemisphaerica | exon |
| TCONS_00017318-exon-sc0000264-1575043694:358001..358543 | TCONS_00017318-exon-sc0000264-1575043694:358001..358543 | Clytia hemisphaerica | exon |
| TCONS_00017318-exon-sc0000264-1510915933:358912..359155 | TCONS_00017318-exon-sc0000264-1510915933:358912..359155 | Clytia hemisphaerica | exon |
| TCONS_00017318-exon-sc0000264-1510915933:358001..358543 | TCONS_00017318-exon-sc0000264-1510915933:358001..358543 | Clytia hemisphaerica | exon |
| TCONS_00017318-exon-sc0000264-1491911889:358912..359155 | TCONS_00017318-exon-sc0000264-1491911889:358912..359155 | Clytia hemisphaerica | exon |
| TCONS_00017318-exon-sc0000264-1491911889:358001..358543 | TCONS_00017318-exon-sc0000264-1491911889:358001..358543 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000264 | supercontig | sc0000264:358001..359155 - |
Blast
The following BLAST results are available for this feature:
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