TCONS_00017726 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017726
Unique NameTCONS_00017726
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017726 ID=TCONS_00017726|Name=TCONS_00017726|organism=Clytia hemisphaerica|type=transcript|length=180bp
GTCATGGGTCCTCTGACAGCCAGGGCATTTCTTTTTACGTGTCCCATTTC
CCTCAGTGGTGGGTGGAGGAGTACCAGGTGGTGTGGTCAAGAACATTAGG
ATAGCGAAGCATAATCTTTCGGCAAGCATGTTGAAGTAGAGTTTACAGTG
TATGGAGtgagtctgttaaatgacgcgccc
Run BLAST on NCBI

transcript from alignment at sc0000273:323389..323568

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017726 ID=TCONS_00017726|Name=TCONS_00017726|organism=Clytia hemisphaerica|type=transcript|length=180bp|location=Sequence derived from alignment at sc0000273:323389..323568 (Clytia hemisphaerica)
gggcgcgtcatttaacagactcaCTCCATACACTGTAAACTCTACTTCAA
CATGCTTGCCGAAAGATTATGCTTCGCTATCCTAATGTTCTTGACCACAC
CACCTGGTACTCCTCCACCCACCACTGAGGGAAATGGGACACGTAAAAAG
AAATGCCCTGGCTGTCAGAGGACCCATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009926XLOC_009926Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017726-exon-sc0000273-1491911889:323389..323568TCONS_00017726-exon-sc0000273-1491911889:323389..323568Clytia hemisphaericaexon
TCONS_00017726-exon-sc0000273-1510915933:323389..323568TCONS_00017726-exon-sc0000273-1510915933:323389..323568Clytia hemisphaericaexon
TCONS_00017726-exon-sc0000273-1575043694:323389..323568TCONS_00017726-exon-sc0000273-1575043694:323389..323568Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273supercontigsc0000273:323389..323568 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017726 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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