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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017840 ID=TCONS_00017840|Name=TCONS_00017840|organism=Clytia hemisphaerica|type=transcript|length=758bp
caaacaccgaaataccgacgcacGGAGGTCacaaacaccgaaataccgac
gcattTTTCTTGAATCACCGACAACACCAGCAACAACGATTGTtaaaatc
cttattttgtcaCTTTTGTGACCGTGTGCAACTTGACACCGAACTACCGT
CACCTTTTTCGTCAAACAACAAAACACGTCATATGTTTGCTCTAGCCAAT
CACGATAGGAGATCAAAGCGGTCCACCAACCTGAAAGATTCTCTTGCGAA
GCCATGGTCTTTAGATGGCATACGTGCCACCGCGGAGTAGTAAGAGTCTG
TATGTCAATGTACATTCCGAAACTATCTTTACCacaaaaaattgttcgat
tcaGAGATAAAGTTAAGAGAAAGTATGTTCACATCAAGCTGTGCTGTTTA
CAAGAAAAACGGCAGGGTTTTTTAAATCAAACGACCAGCTAAACACTGAT
TGATATCGGTAAATTCCGcagaaatcaaaatattgagcAAATTTTCTGAA
AGATAGATGtgtgttttctttgttttgttttcatcttcttttgaAGGCAA
AAATGTGGCGTCATGATATTTCGTTTCCATGTTTTCAAACTGGAGAAAAC
AACAAGTTCAACAAAACAATATTTACCAGTCCTCTGAACAAACGTGCTAA
ACATACAGATAACAATTTACTCTAGTGTAGTCAGTTTTACACGAAGTAAA
GATAAAGGGAAGGACATTTTAAagttaaaatctttaaattatCCAAAAAG
AAGGTTTT Run BLAST on NCBI transcript from alignment at sc0000278:197238..198212+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017840 ID=TCONS_00017840|Name=TCONS_00017840|organism=Clytia hemisphaerica|type=transcript|length=975bp|location=Sequence derived from alignment at sc0000278:197238..198212+ (Clytia hemisphaerica)
caaacaccgaaataccgacgcacGGAGGTCATAAACACCGAAATAGCGAC
ACACGGAGGTCATAAACAACGAAATACCGACACACGGGAGTAACAAACAC
GGAAATACCGACGCACGGAGGTCAtaaacaccgaaataccgacgcacGGG
AGTCACAAACACGGGAATACCGACGCACGGAGGTCAtaaacaccgaaata
ccgacgcacGGGGGCCacaaataccgaaataccgacgcacGGAGGTCaca
aacaccgaaataccgacgcattTTTCTTGAATCACCGACAACACCAGCAA
CAACGATTGTtaaaatccttattttgtcaCTTTTGTGACCGTGTGCAACT
TGACACCGAACTACCGTCACCTTTTTCGTCAAACAACAAAACACGTCATA
TGTTTGCTCTAGCCAATCACGATAGGAGATCAAAGCGGTCCACCAACCTG
AAAGATTCTCTTGCGAAGCCATGGTCTTTAGATGGCATACGTGCCACCGC
GGAGTAGTAAGAGTCTGTATGTCAATGTACATTCCGAAACTATCTTTACC
acaaaaaattgttcgattcaGAGATAAAGTTAAGAGAAAGTATGTTCACA
TCAAGCTGTGCTGTTTACAAGAAAAACGGCAGGGTTTTTTAAATCAAACG
ACCAGCTAAACACTGATTGATATCGGTAAATTCCGcagaaatcaaaatat
tgagcAAATTTTCTGAAAGATAGATGtgtgttttctttgttttgttttca
tcttcttttgaAGGCAAAAATGTGGCGTCATGATATTTCGTTTCCATGTT
TTCAAACTGGAGAAAACAACAAGTTCAACAAAACAATATTTACCAGTCCT
CTGAACAAACGTGCTAAACATACAGATAACAATTTACTCTAGTGTAGTCA
GTTTTACACGAAGTAAAGATAAAGGGAAGGACATTTTAAagttaaaatct
ttaaattatCCAAAAAGAAGGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017840-exon-sc0000278-1491911889:197238..197264 | TCONS_00017840-exon-sc0000278-1491911889:197238..197264 | Clytia hemisphaerica | exon |
| TCONS_00017840-exon-sc0000278-1510915933:197238..197264 | TCONS_00017840-exon-sc0000278-1510915933:197238..197264 | Clytia hemisphaerica | exon |
| TCONS_00017840-exon-sc0000278-1575043694:197238..197264 | TCONS_00017840-exon-sc0000278-1575043694:197238..197264 | Clytia hemisphaerica | exon |
| TCONS_00017840-exon-sc0000278-1491911889:197482..198212 | TCONS_00017840-exon-sc0000278-1491911889:197482..198212 | Clytia hemisphaerica | exon |
| TCONS_00017840-exon-sc0000278-1510915933:197482..198212 | TCONS_00017840-exon-sc0000278-1510915933:197482..198212 | Clytia hemisphaerica | exon |
| TCONS_00017840-exon-sc0000278-1575043694:197482..198212 | TCONS_00017840-exon-sc0000278-1575043694:197482..198212 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000278 | supercontig | sc0000278:197238..198212 + |
Blast
The following BLAST results are available for this feature:
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