TCONS_00018195 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018195
Unique NameTCONS_00018195
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2982

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018195 ID=TCONS_00018195|Name=TCONS_00018195|organism=Clytia hemisphaerica|type=transcript|length=2982bp
TTCAACTTTGAGCAAGTCAGTGAATAATAGAAACTCGATCCAGTCTTTGC
AAGTTTTCCTCGCTAGTTTTTTTTCGAACTACCGCTGGTGGCGTGAAGGG
ACGAGCGAAAACCCTTCAAAAACTAGAAAGAATGGACAAATTACAAGGAA
AAAGAAAGAATCTGTTGAAATTGGTTGATCGTTTACACGTAGAAAAGACT
GTGGCATCAAACTTGGAAGAAAAATCAGAAGAGAACTTGCTGGAGGAATT
TATGAACCCTTTTCTTTTGTCAAACAAGAAGAATGAGGTCTATGAGGTTG
ATCCAAACAtaaacttgaaagttagaaagCAAGTGTATATGCTAAGACGT
ACTCGAGCTACTGAAGGTGGATCATTGATTTGTGAATTGTGTAGCCGTTC
TTCATATAAACAATATTCAATTGAGGTAGAagtttctgctgattcagcca
cTGGTGGTAAACGATCAAACCAATGGAAAAGAGCAAGCACTGAGATAGCT
AAGGTCTGCCGAAGTTGTTTCTTCGAGCAGAACAAAGATCAATCATCCAG
TAAGACTGGATCCAAAACTCGGACGCGTCCACAATTTCACCGTTCTGAAT
GTGGGATCACTACCGGTCGTGCTTCCAAAGCATGGCATTTTGTACGCCGT
GACCTAATCGTAAACAAAACTAAAGCTTTACTCAATAAACGATgctttga
aaatgaattttcagACCGCTTCTTGAATGAAGAAACTGAAGTTGAGGAAT
CTTGCGACTCTGACACAAGTTATGAGAGTGATTCAGGAAGCATTGACGTT
CTTCCTTTTCAATTAGCCAACAAAGGTTGGGTGACACCGGGGTCGTTAGT
TCAAGTGAAACGCACTGATGCTCGGCAAGTCATAGCGTCTCCCTCACCTT
TGCTAACAGAAGAGATTTCAGATGCTTTATTGCAGACTGAGCTTGCAATG
ACTCGAGATAATTCTCCTCAACCAATCAAATCTCCTGAATCAATCAAATC
GCCCAGTGATACTTCGGCAGATGACACGATCCTGAATACACTCGTGGAAT
CTTTCGAAACACCATTGAGCATCGTAACCGTAGCGGAAGACACTGCAAAC
CCAGTAAAAACTCAACTAACAAACACTATAATCGAAGATGGACTATTAGA
TTATTTTACCGATCGACCTGCTCGTGTGCGACGCATCAAACGGAAGCGAA
GACGGACCATATCAAGAAGCGGTGTTATTaagaagaaagtgaagaaaGAT
ACCTCGAAGCAATCAACTTATAACGGACTCTGCAAATTAGTCACCGTGTT
GAATCACACGAAAGGAAAGTATGTTGATAATTCAAAAACATCAACTTTAT
TTGACACTCATGGTCTTGACTGGCGCAACAAGGATCTACCGTCTTATCTG
AACATCAACACAAACCAATATGTAGATTCAAAAGGAGGCTACcgacagaa
aaagaaaaatgttgatgCTTTTATGACTGATCAAAAAGCAAAGCCAGTCT
TAAAGATCAAACGGAAAGTTAAAGCATTTTCTCCGACACCATCTCACATC
CCTGAAAACACTGATCAAAATAACGTTATTGAGATTGAATCAGATTCTTC
AGACAGTGTCCCGTTAACAACTACTTTGAAAGAAGATGTATCTGATGTTC
TACCGCAGATGATAGACCTGAACGATTCTATGCAATCAACTTCTCTTCAA
TTAAAACATTTGTTAGACGAGAAACCTTCCGTACAAGTTAAGTTAGATGA
TATCTCAACTCAACTCGCTAgctctttaaaagaaaaagaagctaAGAAAG
CAGTTGCAGCAACACAGAAGAAATTTGCATCGGTACAGTACGATTGTGAG
ATTTGTCAACAAAACTTAGCAAGAAAATCATACAAAAGTTATTCCAAAGA
AACTGCACCACTTATTTATCTCAAGTTGTTCAAAGGTAACAAAGACAAGC
TTCGTATCTGTTCCAACTGCAACCTGAGAAAAATGAACGAGAAATACAAC
AACGTACAATCGCGCAAACGACCTGCTGGACAGAACGAACAAGAGTCACC
TGCTCCAAAAGTTTCTAAACAAACACCAATATTGGGAAAATCAAGTTCAA
GCTCGTCGTCTATGAAAGGGCAGACGAAACAAGCCTCACCACAAGTATTC
AAACTCAGTGACGCTGGTGCACAAGACATGAATGTTACTATCGTTAAAAG
TCCAGATGCAGAACAGATGAAAAGGATTCAAAACAGTAATGCTAAATATG
TCATACTAAAAGCAACACCGACTGCTAATGGCAACATTGTTACCGGTGAT
TTAGACCAAGTGTTAAGTGAAATCCGTATCCAAGGAAAGAACTATAAGAT
TGATAAGGATTTCAAATTAAACGAACTTGTAAAAGAGAATGAGAACGCTG
GTACTGTGACTGCAAACTCTAAAGATCTTTTAGTGAAGCAACTCCCAAAC
ATTCTCAAACGAACGATAGGCCAACGCAACGGTGGTCCAACAACCTTTAA
AATTGTTAACGTCATGCCTCCTGCTATGGTTGCCAACAACACGAACGTGC
CCAAAGTActtccaaaaacaacaacacaGCAACACATCACATCATCTCTG
CCATCTATTTCTCTACAAGTTCAAGAACAGATCCGAACCTCTCTGGCTAA
TAGTAAGAAACCGGGAACAAATTTAACCGGATTGACCAGCTCGCTTCCAA
CAAACGGACCCGTCAAACCAATTCAAATGGTTAACCCGCCCAAAGTAACA
CTACCTGCTTTATCCGGTAAGAAACGGCCAATGCCTAATACTAACCAATC
TGTTACACAGATTCAAAGACAAAAGATTGTTTCCTCAACAAAAACTTCAA
GCAAAGGAGattctaaaaaatgaaaaatgtattttgtaAAGTATTTAATT
ATGATTTTAAAGAGTATTTTAATGGtcttttattaaaaaaggtttaatat
acAGTGTGCCCGGAAAAAATATCATACTGAAT
Run BLAST on NCBI

transcript from alignment at sc0000291:213641..224214+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018195 ID=TCONS_00018195|Name=TCONS_00018195|organism=Clytia hemisphaerica|type=transcript|length=10574bp|location=Sequence derived from alignment at sc0000291:213641..224214+ (Clytia hemisphaerica)
TTCAACTTTGAGCAAGTCAGTGAATAATAGAAACTCGATCCAGTCTTTGC
AAGTTTTCCTCGCTAGTTTTTTTTCGAACTACCGCTGGTGGCGTGAAGGG
ACGAGCGAAAACCCTTCAAAAACTAGAAAGAATGGACAAATTACAAGGAA
AAAGGTAAGTTATTCTTCAGATATGATATTCTCAGAGAGGTTTTTAACAT
TATTGAAACATTTTATAACtgttttaatgtatttttgatgaatttggGAC
AGCATTTCGCACTCGACGGAATTTCGCCTACCCGGATCAAATCGCGAGTT
CATTTTTCTTGTTCTTCATACTTTAGAAAGAATCTGTTGAAATTGGTTGA
TCGTTTACACGTAGAAAAGACTGTGGCATCAAACTTGGAAGAAAAATCAG
AAGAGGTAAGGTATTTTTTAGCGAggaacaatattttgaaagtgcCGCTC
GGGTGCTTCCGCAGCTTTACGCGGATTTGCGTTCCCGCGTGTGATAAAGA
AGCGATcagaaaagattctttttccTTAGCTCTAACAGTTTCAATCTTCT
TCGAAAATGTTGTTTCAAGCTATTTTGGGGGATCtgagaatttttcttca
tttttcaaaacgttttttaacatttttttgatgaaatttttcctGCTAGT
CCGGGCATGAATGTCGTGTCCGCATTTGTTGTTAGCCACGAACGAAAAAA
AAGCGCGGGGCGgtcttttgtttacatttttctactTTCACTTTCTCAGA
ACTTTCCATACTTTCACTTTCTCAGAACTTGCTGGAGGAATTTATGAACC
CTTTTCTTTTGTCAAACAAGAAGAATGAGGTCTATGAGGTTGATCCAAAC
AtaaacttgaaagttagaaagCAAGGTATAGTATTGTTTATTTGAATATA
ATTCCCAACTCCACCTCTgactccagcatcaaaacaatgattatAGAACC
TTCCAGCTACGTTTCcagctcttccagaaaaaatccgttcatgggggcgg
ggtggaggatatattatttttttcatgaattacccctggacattttgatt
tttaaccccctggacacgggttatacccctggaaaaacatcaaatcaacc
ccgtggacacaaaaaattacccctggacattggaatttaccccctggaca
ttatTGGATTTACCCCctcccctggacattgcaattttttggcatttctt
caatacccctggacaattcatcctccaccccccatgaacggaatttttct
ggaagagcccaatacatGTGTGTTTaccagtgcgtcacaaacagccatat
aaacaaaactcaacattctcacaaaagttgtctttttgatttcccaaaca
ttcgtctaaagcgttcacttccacaaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggtaagtggcgaagca
acacaacagattattcgtaaagtaaagaaatatcttttggcattgacaat
caaatataatatattatattatatttccttaattcaaaaatcaaaaattc
atttgcgaaaaaaaaaataataataatgaattaatattacatactaagac
acccccgtcttttactctcgtttaattttcgatctcggaacgtgcaaaac
gaCCGTCCGCctaatatccacccaatcagcttaaattcactttaattgtc
ctctgactttcaaaaaatagtatttaaaaattatgaattcataattatta
caaaaaacaaaaagtttgatacttcaagagaaatattcaataaattccta
gtttcaattttcagtgggcgtttttctagggcttcgtttatcgcgcaatt
tttgcgtcacacaaactttctcggctgctcgtaataattatgcattgcca
aatttggttctccattgtcaagtcaggatcgatggtgacgtcacctaggC
ATAAAGNaaaagttgtctttttgatttcccaaacattcgtctaaagcgtt
cacttccacaataatttatgtaattgcaattttggtcagtccacagtcgt
cttcaacatatacacgtgtttttatttacgtgaccgaagtgcctactaaa
acaatctgGGGGTAAGTGGCGNcctaagcataaaaaagaaaggattttgt
cagttttatgcatatattaatttgcgagatattctattcgccacgcgagc
gcacttttcgtagactagtcggaatactttcttttactcgcgggattgat
ggtaacttttcatcttcgttattttttaaatgaagccAGAAGACCGCACA
GTACCGTATGGTCCGTGCGGACAAAGTGCCCACGAAAgcggacgatggtg
cggtccccgccgtttgtttatatttctttcgGTTGCCgtaagaatttcag
cctcgagttcaaacaagcaaaacaataaaaacaaaatatccGCACCATGA
CCGCACTGAATACCGCACTCATTCTTATGGTGCTCTTTAGTGACCGATCA
AGTGCGTTTGAATGGAATTTCTAGGAaagatttttggataatttctgGTA
GATGCAAAGGTATCATTTTACCGCACAGTAATCTTTTCGCCGCTTTTTTG
CCGCACATTTTATCGATcaggcttcggcataagaaaGAAGAAGGCGTGTG
ATCATCGCACGCCTACATAGtaatttttagtaatttaggcgtgCGAATCA
TGGCACGCCTCATTTTCTCTAGACGTGCGATCGCGTGCGatcgttttttt
ctttaaacatcATTAATGATGAGGCACaaacttttgaacaatttttcttt
tgatctttcttttattTACATAAAAACTAGACAACAGGAAAGAAGAAAGT
GTATATTCAATCTtcatatttgaaaaacaaaaacagaaaccaAAAGAGCA
CTGAATAATCGAGAAGGAGAATACTTTACTTTAGGAAAACAAATGAGAAG
AAGAATCATGCAGCAAAAGTAACTTTTAAGAAGAGNTGTCATAAACCAAC
GACCTCATAAAcatagcatgcgagagggaaggaaaaagatttgagagagg
aaaaatcatacagcaaaagtgatttttgtaaaaggtttTAGAGAGACGAA
AAATCGTGcagcaaaagttatttttgagaaaGGCTTGTTTATTGAAGACC
AAAGCATAGTATGAGAGAAAGAGGAGAGAGAAGATGTGTATCCGTAagag
taacttttttataagaaattttgtaTACATATAGCAGTTTGAAAGAGTAA
AGGAAAGTTTATCTTTCATCTATTTGGTTCTTATGATTAAAGTAGAAAAT
TATATTTGATCTTCTTTCAACaagcagaaaaaatatttctagaatAAATT
TTTGCATGTGCGATTGATCGCACGCCTCGCTAGGTTTTCAAGATTTATGG
CGTGTGATAAATTGCACGCCTAAAAGGCTTTTAGGCGTGTGCGGAGGCGT
GCGCGTGCGATCGCACGCCTAATATGCCGAAGCNTTTTCATGATTTATGG
CGTGTGATAAATTGCACGCCTAAAAGGCTTTTAGGCGTGTGCGGAGGCGT
GCGCGTGCGATCGCACGCCTAATATGCCGAAGCCTGATCGATCTGtccgc
accaagaccggtctcatttttaatgtactccaaatcgcttggggggtcAC
ATTTTTTCATGGATCCTactagaagttttgcggcgcatttttttgcttgc
gagtcaagtaaactatatagcgctttcgcagcattaatctttcatacgca
tttcggcgggatgctagtgtgactaactggcaGTATAGCTCTATCTCTTC
ATATAAGATTTAcaggaaacgcatatttggactttgtacctaATTCTGCA
CACTTAAAAGCTAAAACACTGCAaaaagcaggacaaaaatcagttttttg
aagtttgcaaaaaaaacgccgcttagaaaatctttcaaattcagtatgtc
aatagggcagtaaaaaatacaacttttgtatttttcctttttttgcaaaa
gttccagaaattaaaataaagggataatgataattgaatactatccactg
acgATCCGCAGCACTATCTCTTCACTtactctttgcttgagaaagtgatt
gacagattaaagtttgTCATGCGTGTCGGGAGCTCGCTGACGTTCTGCAG
CTTTGGCTTTTTTTAaactcggctcaatcctcaagCCACGTAAAATGGCA
GAACTTAGCTGCagcagatcatttcgatggaatttGTTGACGGAAAATCC
TCTGTTTGATTGTAaaatgatgacagtgccattGTTAATTtggttagatc
tgacaaattgatgtttttgaGTGTACTTTATAGTTTTGGTTTCTAATGAA
GAATTGTATTCAGGTTTTCATGTTagtagatgctgttttagagctttaaa
gCTAACCTGTCTGCTAATCTATACACAATCATTAATCAGGATTCCAAGGG
AGGGTCTATTGCCTATATACCTTTTGCTAGAtgtggtctggaagcctttt
gtttctttctattgttgagAGATTGAACTTACGTTGAAAAACtattttgt
tttgctcactttttgccatcaactgctcaaacttgagacagttggtcgaa
acatgggattgttgatatctggacTGTATTTTTACCTACTGTTAAAtcac
tttgacaacaaatttgttttgatacttccaccaagtttatcaaccaCACT
TCTTCTGTCATTCATATATCACAAAAATAGATATGTCTAGAAAAGCTGCC
TCTGATAAAAGTAATTAACCATTAACATCATATTTTAATGTCTTGCGTTC
TCAAGAGGCTTTTATATAACAGGCTGTGCGATGAGATGAATATATGTCAG
CAAGAGCCTGGTTTCTATGATTTAGTTGATGTAAGTGGAGAAAAGTGCTA
TGAGCGGACTtgaatcaaatgactttggaggttcggtgaaatggtggcct
gatcccatgttttgtcagatagtcccaagttagagcagttgacagggATC
ATGTGATTAATTTttgaaccaatcccaagaggagtatttggtaacgtgat
caaaaactgagcaaatcaatTTATAGTTAtttttaacaaaggaaaaagtt
taaaaaaagctACAGCAATAGGCTTCctgaccagggttttttatacggac
tatgatgTTATGTTAAATAATTAAAGACTCCAGCATCAAACAATGATacg
aaaaaaatgtttacacACTTATAGTAATTACACATTAATGTGTCATTGTT
TTCAAATTGGAGTTTTTTATTATGCAACATGACGTCACttctagcaaaag
gtctatcaaTTGATTGATTATTCATCGATTGGCTCCAAGATCATCGGTTG
ATCACAAAACCTGGAATTGCTTTGCATGCCAAGTGCAAAGCTATAATTCA
AACCCATTGTTATATTAGGCAAATCTTTAAAAGGTTTGTCTTTCTGAGCA
AACATCAcaaatgtaaaaagaaaaccattGGACATTtgaaatcaatatat
tttagctttatcaaacagaaaaaatattagTATTAGATAGCTATATAAAG
ATGTTTTAAGTGTTTTTACGAgggattataaaaaaatatccgGGTAGCGG
CTGGgtgatgtttaaaaaaatttttacctGGCTGATTTCCTGAAACAAGA
CTACTTTTTTTTGCAGTcaagataaagagaaaaaaatccagtTTTTATCA
ACTTTCCAAATTGAAATTAGTGCTTGCTGACACTTTCATCACTCTAATTA
GAATCATAATTTATTTCATAACAAAATTCCACGGTAGCTCATTCCAAACA
CAGATGGGTAGATATAACATTGATATTTAAAGGGGAAGAGTTATCCTCCC
AAGGCCGACCAAGGAAAACCTCTTTATTCCAATCAAAACCATTTCTTTAG
TCTATTTGGGAAAAATGACGTGTTTGAGTTTTGTATGACAAAATCAgcag
caaacgatatcatattTGGTGGCAATGAAAAACTTATGGTATAATCCCCA
ATCCTGCACTGATCTGAACTTTTGTATAATAAGTCTTTTCAAGGTGTTCA
CCAGCAGGGAATACCAAACtttgtctttttcattttttcatagtCATGAA
AGTTATATATGTATTATTATCTGGCTTTCCATGGATTATATAATTGATGT
AACTTTATTTGTGTCCCCGTCatgctaaagtaaaaaaaacaactacCCCT
TGGTAAGAATCTTTTAACTTTACTTGAAAAAGACAAataagcttaaaaaa
ttgttgctcTGAAAAAACGtgtcttattttcattttgttacaCATCTTGT
AGCATTTTATGTTTCCACCTTTTTATTTTAGTGTATATGCTAAGACGTAC
TCGAGCTACTGAAGGTGGATCATTGATTTGTGAATTGTGTAGCCGTTCTT
CATATAAACAATATTCAATTGAGGTAGAagtttctgctgattcagccacT
GGTGGTAAACGATCAAACCAATGGAAAAGAGCAAGCACTGAGATAGCTAA
GGTAAGCCTTTATTTTTATGAGAGTCAGCTATTCTTTAGTATAACTGTTT
TTCTAagtattttcaccatttttgttGCAGTTTTTCTCGTAAATTTGTCT
CCTCTAATGTGAGGAAAAACATGAGtattttggataaaaattaGGTTTGA
TGTTAAATTGTGGAAAACGAGGAACGAGAATATTTCTATGAATCTCTTTT
GTGAAACAATGTATTAAAGATCCACATATATCAAGTAGAATTAAAAAGGG
GCACTGTTTAGATTTAGTCATACACACAATTTCTTTTGGCCCAGCATctg
gcctttcattagcatgtcTCTTCATGCCCCTTTGGCTTCTTGTTTCTACT
AATAGAAGTGGTCTGGCACGTACTTTTTTCGGAACACGCTGTAAtcgttt
tggccgataaggtatatataGGTTAATCTCTTCTCCAGCATCTtaacttt
tgtattttgttgAATGTATTGTTTTGAGAGTCATTGTTTTTTTATAGGTC
TGCCGAAGTTGTTTCTTCGAGCAGAACAAAGATCAATCATCCAGTAAGAC
TGGATCCAAAACTCGGACGCGTCCACAATTTCACCGTTCTGAATGTGGGA
TCACTACCGGTCGTGCTTCCAAAGCATGGCATTTTGTACGCCGTGACCTA
ATCGTAAACAAAACTAAAGCTTTACTCAATAAACGATgctttgaaaatga
attttcagACCGCTTCTTGAATGAAGAAACTGAAGTTGAGGAATCTTGCG
ACTCTGACACAAGTTATGAGAGTGATTCAGGAAGCATTGACGTTCTTCCT
TTTCAATTAGCCAACAAAGGTTGGGTGACACCGGGGTCGTTAGTTCAAGT
GAAACGCACTGATGCTCGGCAAGTCATAGCGTCTCCCTCACCTTTGCTAA
CAGAAGAGATTTCAGATGCTTTATTGCAGACTGAGCTTGCAATGACTCGA
GATAATTCTCCTCAACCAATCAAATCTCCTGAATCAATCAAATCGCCCAG
TGATACTTCGGCAGATGACACGATCCTGAATACACTCGTGGAATCTTTCG
AAACACCATTGAGCATCGTAACCGTAGCGGAAGACACTGCAAACCCAGTA
AAAACTCAACTAACAAACACTATAATCGAAGATGGACTATTAGATTATTT
TACCGATCGACCTGCTCGTGTGCGACGCATCAAACGGAAGCGAAGACGGA
CCATATCAAGAAGCGGTGTTATTaagaagaaagtgaagaaaGATACCTCG
AAGCAATCAACTTATAACGGACTCTGCAAATTAGTCACCGTGTTGAATCA
CACGAAAGGAAAGTATGTTGATAATTCAAAAACATCAACTTTATTTGACA
CTCATGGTCTTGACTGGCGCAACAAGGATCTACCGTCTTATCTGAACATC
AACACAAACCAATATGTAGATTCAAAAGGAGGCTACcgacagaaaaagaa
aaatgttgatgCTTTTATGACTGATCAAAAAGCAAAGCCAGTCTTAAAGA
TCAAACGGAAAGTTAAAGCATTTTCTCCGACACCATCTCACATCCCTGAA
AACACTGATCAAAATAACGTTATTGAGATTGAATCAGATTCTTCAGACAG
TGTCCCGTTAACAACTACTTTGAAAGAAGATGTATCTGATGTTCTACCGC
AGATGATAGACCTGAACGATTCTATGCAATCAACTTCTCTTCAATTAAAA
CATTTGTTAGACGAGAAACCTTCCGTACAAGTTAAGTTAGATGATATCTC
AACTCAACTCGCTAgctctttaaaagaaaaagaagctaAGAAAGCAGGTA
AGGTTTAGGCTCAATTTACCTCAATATTCTTTCGAGTCAAAAGTAAAATC
CCAAGGTCGCTTGCAAAAGTGctcgccaatttttttttttctcgaaagtt
ttcattttccctaatctattttctttcaaatcgcAAAGCATAGAAGCACA
ATCAAAACTTTCCCTTAATATAAAGGGGACGTAAGTCACACACTTGAATA
TTTgaactgaataatttttttNTTTCAAATCGCAAAGCATAGAAGCACAA
TCAAAACTTTCAGTAATATAAAGGGAACGTAAGTCACACACTTGAACATT
TGAACTGAATAATTTTTTGACTCTCTAGCAGTTGCAGCAACACAGAAGAA
ATTTGCATCGGTACAGTACGATTGTGAGATTTGTCAACAAAACTTAGCAA
GAAAATCATACAAAAGTTATTCCAAAGAAACTGCACCACTTATTTATCTC
AAGGTAAGATACTTCTTCAACCCTCATCATTTTTATGAGAATCATTTTGC
ATATGTATATAGTAAGTTCCCCAGTTAATGGCTAATCTACAGGCAAAGCA
AACAAATCCTCTTAAGTACCCTTTTGGAGGCGGAAACAATTTACTCTAAA
TCCTCAAGTCGAACCTTAATTCCGATGTCCCTTTTTTGAGACTGACGGTA
TCTTTATTTGTATTTCAGTTGTTCAAAGGTAACAAAGACAAGCTTCGTAT
CTGTTCCAACTGCAACCTGAGAAAAATGAACGAGAAATACAACAACGTAC
AATCGCGCAAACGACCTGCTGGACAGAACGAACAAGAGGTGAGATACAAT
CCAATCCTTTAAAATGACTTTCATGataatactttaggcgtacNNtagag
ggacaaatacttcttggattggcttgaaacatttgtcctttgacttatta
gtcttttagcaggctaaaaagtgccataaaagttaccttttattcaaagt
ttgaagttttattctattttgtcaagaattttttgcgagcataaactttt
gcgaatggcccttcctagaagttctaaagacatttactttcgcgaaaagg
gccaaaattcgcgaaaatcgtgaaagtttttgctcgcgaaagtttgtacg
tctaAAGTCATAATATAATTTCCAATCTCCTGCAAATGGTGAACGTTTGA
CTTCAactgtaaaaatatttcttttgtatcTTTTCAGTCACCTGCTCCAA
AAGTTTCTAAACAAACACCAATATTGGGAAAATCAAGTTCAAGCTCGTCG
TCTATGAAAGGGCAGACGAAACAAGCCTCACCACAAGTATTCAAACTCAG
TGACGCTGGTGCACAAGACATGAATGTTACTATCGTTAAAAGTCCAGATG
CAGAACAGATGAAAAGGATTCAAAACAGTAATGCTAAATATGTCATACTA
AAAGCAACACCGACTGCTAATGGCAACATTGTTACCGGTGATTTAGACCA
AGTGTTAAGTGAAATCCGTATCCAAGGAAAGAACTATAAGATTGATAAGG
ATTTCAAATTAAACGAACTTGTAAAAGAGAATGAGAACGCTGGTACTGTG
ACTGCAAACTCTAAAGATCTTTTAGTGAAGCAACTCCCAAACATTCTCAA
ACGAACGATAGGCCAACGCAACGGTGGTCCAACAACCTTTAAAATTGTTA
ACGTCATGCCTCCTGCTATGGTTGCCAACAACACGAACGTGCCCAAAGTA
cttccaaaaacaacaacacaGCAACACATCACATCATCTCTGCCATCTAT
TTCTCTACAAGTTCAAGAACAGATCCGAACCTCTCTGGCTAATAGTAAGA
AACCGGGAACAAATTTAACCGGATTGACCAGCTCGCTTCCAACAAACGGA
CCCGTCAAACCAATTCAAATGGTTAACCCGCCCAAAGTAACACTACCTGC
TTTATCCGGTAAGAAACGGCCAATGCCTAATACTAACCAATCTGTTACAC
AGATTCAAAGACAAAAGATTGTTTCCTCAACAAAAACTTCAAGCAAAGGA
GattctaaaaaatgaaaaatgtattttgtaAAGTATTTAATTATGATTTT
AAAGAGTATTTTAATGGtcttttattaaaaaaggtttaatatacAGTGTG
CCCGGAAAAAATATCATACTGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010225XLOC_010225Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018195-exon-sc0000291-1491911889:213641..213794TCONS_00018195-exon-sc0000291-1491911889:213641..213794Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:213641..213794TCONS_00018195-exon-sc0000291-1510915933:213641..213794Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:213641..213794TCONS_00018195-exon-sc0000291-1575043694:213641..213794Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1491911889:213967..214045TCONS_00018195-exon-sc0000291-1491911889:213967..214045Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:213967..214045TCONS_00018195-exon-sc0000291-1510915933:213967..214045Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:213967..214045TCONS_00018195-exon-sc0000291-1575043694:213967..214045Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1491911889:214416..214515TCONS_00018195-exon-sc0000291-1491911889:214416..214515Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:214416..214515TCONS_00018195-exon-sc0000291-1510915933:214416..214515Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:214416..214515TCONS_00018195-exon-sc0000291-1575043694:214416..214515Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1491911889:220122..220291TCONS_00018195-exon-sc0000291-1491911889:220122..220291Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:220122..220291TCONS_00018195-exon-sc0000291-1510915933:220122..220291Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:220122..220291TCONS_00018195-exon-sc0000291-1575043694:220122..220291Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1491911889:220788..222087TCONS_00018195-exon-sc0000291-1491911889:220788..222087Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:220788..222087TCONS_00018195-exon-sc0000291-1510915933:220788..222087Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:220788..222087TCONS_00018195-exon-sc0000291-1575043694:220788..222087Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1491911889:222422..222543TCONS_00018195-exon-sc0000291-1491911889:222422..222543Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:222422..222543TCONS_00018195-exon-sc0000291-1510915933:222422..222543Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:222422..222543TCONS_00018195-exon-sc0000291-1575043694:222422..222543Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1491911889:222759..222878TCONS_00018195-exon-sc0000291-1491911889:222759..222878Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:222759..222878TCONS_00018195-exon-sc0000291-1510915933:222759..222878Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:222759..222878TCONS_00018195-exon-sc0000291-1575043694:222759..222878Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1491911889:223278..224214TCONS_00018195-exon-sc0000291-1491911889:223278..224214Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1510915933:223278..224214TCONS_00018195-exon-sc0000291-1510915933:223278..224214Clytia hemisphaericaexon
TCONS_00018195-exon-sc0000291-1575043694:223278..224214TCONS_00018195-exon-sc0000291-1575043694:223278..224214Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:213641..224214 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.68465	1.01603	1.11273	2.58446	5.65897	3.41043	3.39726	3.52417	2.64395	3.66377	4.89379	2.71425	1.90556	4.76231	2.49714	3.77055	4.01181	2.90469	3.06388	5.21358	3.56541	4.44163	7.51897	6.41664	4.19723	6.12597	3.025	2.23685	1.72015	5.49252
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018195 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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