TCONS_00018412 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00018412
Unique Name	TCONS_00018412
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3910

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000300:17520..24554+
coding sequence from alignment at sc0000300:17520..24554+

transcript sequence

>TCONS_00018412 ID=TCONS_00018412|Name=TCONS_00018412|organism=Clytia hemisphaerica|type=transcript|length=3910bp
CAAGGGGAGCCCGAAGCTTTAATTTattatcagaggcaaaaaccaaaaaa
aagaaaaacaacacatTGAGAGGATGTATGACGGAGAATAAACACGATCA
AGGAAGGCAATGAATGAAGAAAAGTTTTCCGCTTGGATAGCCTGCTCAAG
ATTGTGGTTGTCATCCTTTGTTGTATGGAAATGAGATTTCACTTTCATGT
TTTAATGCAAACAATTCTACTTCTTCTTCAGTCTTTTCAAAATTCGATGA
TGGTGCAGACTTCAAGAGCTTTGTTTTATTTACCTCAACACATGGATATG
CTTACTGTACGTAACCATGGCAACTCATCCATGATGGTAAACGTGGGAGA
ATCATTGAATGCCATGTTAAACGCAAGCATGACAGAAAACGTTGAAGATT
TCGGTCTCAGTTTTTTAAACAAGAAGAATGCGAATATTGTGTCAGAACTG
AAGAAGTTTGAGGGGAAAATGATGTACAGATTTGATAAAAACCTTTGCAA
GTTTaggGACTCAAACAAGCCAGAAAGTTGTTACCCACAGTACAGAGAAG
CACTGGATGGAATCTATCATTACTTCCGCTTCTCCAAATCCATCATCATT
CACACTATGTCTCCCTGTGATGCACAAATATTGCAAACGCtcaacaaaac
attcgaatctcgCTCATCCAGTACAATACAAGAAGCGGTCGTCAACTTGG
ACTCACTGACCCAAGATATTTCGAAACTCGTTTATCAAATCAAAGTGTCT
GGAGTAGATTTAGTAATAAGCCTCCTTGAGCCATCTTTAACAGAGATGGT
GTTGGAGGCGGCTTCGAGGTACGAACTTTTAGACTACTCCTTAATTTGGA
TCACACTTTCGCTTCATCAACACATTGCGCATGTGCAAACAAAACAGTTA
CCATGGCAATGGATAGACTTTCGATTGGAAGAAGCCAACATGGAAACCGA
ATCAATCAAACAAAGCGTGGAAGAAACAGAGAGAACACTACAAAACACAA
CCTTCGAAAACACGTCCGACATACTTGAAATGGAATTCCCGAGATGCGAT
GAAAGCAAACAAAAGATCAGTATATACGCGCGAAATTCATCCACGGATGA
CGTCATTACTTGGGGTTTGATCTCCGAATGGACTAGTCAGAGGGGGATAC
ACGTTTATCCTAACGCAAACTTATTAGTTCGAATGATTCGTATAAAGACC
TCTTTAACAACATTGAGAATAGCAACTGTTTTGGATGACCCCTTCGCATC
TTACGCCCCTCATTTATACAACCCGAACAAAGGAGGTAGTTGTGACCAGG
GCTTGATTTGTCGGACAGCCGCAAAAGGGTATCCGAGCGACCATCCTGAT
AAATGGGAGAATAAATGTTGCGTTGGAATGGCCATTGATCTCATCGAGTT
GATTTCAGAGGAACTTTATTTCACACCTGACTTGTACATAGTCGAAGATG
GTTTTTACGGAGGCAAAGATAAAAACACGAGCGAATGGAACGGACTTGTC
AGAGATGTGCAGCTTCATAAAGCGGATATCGCAATCGCGGCGCTCACTGC
CACCGCCGATCGACTGAAGATAGTGGATTTCTGTGAACCTTTTCTTTTGA
CCGACCTCGGAATCATGATTTCAACAATTCACGACCAATTAGACTTCATC
AATTGGGAATTCTTAGCACCTTTATCAACGCGATTGAGAGTTTGGATCCT
GGTCACTTTTATCATTGGTGTTTACTTGATCTACATTCTGGAGAACCAAC
ATTTGGTGTTACAGCGCATCATTGATAAGGGTGTGTTTCCACGGTATCAA
TGGAGAGAGGGTTTCTCTTATTTCTCTGGACTGACATTTCAAAGAGATTT
AGGGGGAAAGAATCCACAACGAGCGGGAGCCAGGGTGACTGCGGTGGCAT
TTGCTTTCGGTATGGTAATCATCATGACAACATACACAGCCGTTCTGACT
GCCTCCAAAGTCTCTCAATCTACCTCCAATCCGTTCCATGGCTTTGACGA
CGAAAGGGTGCGAAATCCATCATCAGACTTCAAATTCGGAACAGTTTCTC
ACACCAGTATGGAATCTTTCTTCAAGAACTCCAGAGATGACATTCATCAA
CGAATGTTCCGTTTCATGCTCAACTACAATGTCAATCAATCTCTCGAAGG
AATCGATATGGTCAGAAAAGGaaaattgaacGCATTTATTCATGAGACAC
CATTCTTGACATACCACGCTTCAAAACAATCAGATTGCAGCTTGAAAATT
TTCGGCAATTTGAACCAAGGAGGATACGCGTTCAGCGTGCCCAAGAACTC
TGTCTGGAAACATCTTCTTTCGCAAGCAGTTTTGAAACTGAAAGAGCAAG
AGACAATTGAAGACCTTTACAAGAAATGGTTCCCTTTTTCGTGTGCTAAC
AATGGAACGAGTTCAGAGTACGAACCTGTACAGATCAATTATTTCGGTGG
CTTGTTCTTCATTTTATTGCTAGTCCTCATTTTGTCCTTATTTCTGTTGG
GAGGCGAACATTTTTGTTACCGACACCACCGAAGAGTCATCAACCCCATC
CAGGATAAAGTCCAAGTGTGGAGAGAAACCAAAGCGACTGAGCGGCGCAA
CGCGATTATCAATCCAGACGACATCAGTCGCCTTCAACAACTTCATCAGA
ACGGGATGCTCGGTCAGAAAGATCCGGTGGAATCGGCCGAATCATCTTCA
GAGGGAGATATCAGCGAAGGAGAAGAGGAGTTGATCCGAATGAGACTCGG
AAGAAGGAACGTCACTCGAACAAGCGTCGCCTCTTCCGTACAACGCACAA
GCTTAGATTCTTTAGGTCAATATTTCGCAACGGACGCAGCTCAACGTAGG
CGAGGGTctagactagatttaacatcaATCAAAAAATCATCCAATTTCGA
CATGGGCTTATCCACGACTTTAGAGCTTAGTGAAATCAGCAATATAAGTG
AAGCTAACAACGAAGATTGTGAATCTTTGAGAAGCTCTTCGGCCAGTAGC
TTATGCTCTAACGCCACTTTACCAAATATAAATCCCAAAGAATCGTCACG
TGACATCAATAACCAATCAGATGTCGAAGAAAAGGAAGATATAACTACGA
AACAAAACACAGAACAAATCCCTTCGCCTGAAACAGAGAACAGCTCTTTA
GAGCTTAGCAACAGTGAAACAAAACTCATCCCCAATGGGGTCCCCATTAT
TGTGTTGCCAAATAACAAAGAGAAAAATGTCATAACGAAACCAAAACATC
AAACAAACGGCCATGTAACGATTGAAATcgtccatgatgaaaatatttta
caggACTCGGGCACTGTTATTGCTAATGGACACACGTATCAACTAAATAG
CACGGACGACGATAAAGTCCCTCAGCAATGGAACGGTTTCGCGAATGGGA
GCGTCCACGAAGATTCATTCGACGAAAAAACGAATATTAATGAATACAGT
AAGAGCAAGGAAATAAAACATTCAAGCGATAAAAGATCTTtcggaaaaaa
gaaaatttcaaacggAATAATCAAAACGAGAGATTTTAGTATAGTTGATA
TTCCCGAATCTGTATTACCTTATAAcaactttttcgaaaataataatGTT
GTTGGGGGAATAACGACAAGCAgtgaaattgatttgaaaaaagaaaaaca
aataaatcaTCGGAAAGCTCGAAGAAGAACGTTACCAATAATTCAAACTA
GCAGTTTCGTCTAGTAGTTGTAGTCCTCTTCTTagctttattatttaatt
ttctatAGTAAAAGACAAATAATTGAGTGCTTGATAAATCGTACCTTCTC
TTAAACATTTTCTTCACTAAACACAGGTTAGAATCTACTAGAATTGGAAA
AGGTTATTAAGCCGAATAGTGACCTTTTCTTCCAAGCATATCTAATTATT
TATTATAAAG

Run BLAST on NCBI

protein sequence of TCONS_00018412-protein

>TCONS_00018412-protein ID=TCONS_00018412-protein|Name=TCONS_00018412-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1179bp
MEMRFHFHVLMQTILLLLQSFQNSMMVQTSRALFYLPQHMDMLTVRNHGN
SSMMVNVGESLNAMLNASMTENVEDFGLSFLNKKNANIVSELKKFEGKMM
YRFDKNLCKFRDSNKPESCYPQYREALDGIYHYFRFSKSIIIHTMSPCDA
QILQTLNKTFESRSSSTIQEAVVNLDSLTQDISKLVYQIKVSGVDLVISL
LEPSLTEMVLEAASRYELLDYSLIWITLSLHQHIAHVQTKQLPWQWIDFR
LEEANMETESIKQSVEETERTLQNTTFENTSDILEMEFPRCDESKQKISI
YARNSSTDDVITWGLISEWTSQRGIHVYPNANLLVRMIRIKTSLTTLRIA
TVLDDPFASYAPHLYNPNKGGSCDQGLICRTAAKGYPSDHPDKWENKCCV
GMAIDLIELISEELYFTPDLYIVEDGFYGGKDKNTSEWNGLVRDVQLHKA
DIAIAALTATADRLKIVDFCEPFLLTDLGIMISTIHDQLDFINWEFLAPL
STRLRVWILVTFIIGVYLIYILENQHLVLQRIIDKGVFPRYQWREGFSYF
SGLTFQRDLGGKNPQRAGARVTAVAFAFGMVIIMTTYTAVLTASKVSQST
SNPFHGFDDERVRNPSSDFKFGTVSHTSMESFFKNSRDDIHQRMFRFMLN
YNVNQSLEGIDMVRKGKLNAFIHETPFLTYHASKQSDCSLKIFGNLNQGG
YAFSVPKNSVWKHLLSQAVLKLKEQETIEDLYKKWFPFSCANNGTSSEYE
PVQINYFGGLFFILLLVLILSLFLLGGEHFCYRHHRRVINPIQDKVQVWR
ETKATERRNAIINPDDISRLQQLHQNGMLGQKDPVESAESSSEGDISEGE
EELIRMRLGRRNVTRTSVASSVQRTSLDSLGQYFATDAAQRRRGSRLDLT
SIKKSSNFDMGLSTTLELSEISNISEANNEDCESLRSSSASSLCSNATLP
NINPKESSRDINNQSDVEEKEDITTKQNTEQIPSPETENSSLELSNSETK
LIPNGVPIIVLPNNKEKNVITKPKHQTNGHVTIEIVHDENILQDSGTVIA
NGHTYQLNSTDDDKVPQQWNGFANGSVHEDSFDEKTNINEYSKSKEIKHS
SDKRSFGKKKISNGIIKTRDFSIVDIPESVLPYNNFFENNNVVGGITTSS
EIDLKKEKQINHRKARRRTLPIIQTSSFV

Run BLAST on NCBI

transcript from alignment at sc0000300:17520..24554+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00018412 ID=TCONS_00018412|Name=TCONS_00018412|organism=Clytia hemisphaerica|type=transcript|length=7035bp|location=Sequence derived from alignment at sc0000300:17520..24554+ (Clytia hemisphaerica)
CAAGGGGAGCCCGAAGCTTTAATTTattatcagaggttgagttcctttat
cattatttttcccGAGATATGATACAGCTTTTTGTTTCCCTTGTTGTagg
atctttttctttttgttgtcGTTCAATATTGAGAGGGTGAGAAAAGGagg
agaaaaataaagaagaagagtatgaaaaaaagaagacgttaaaGTGTAAC
ATTAAAAGAATGAGTTCTATTTAAAATGTTGTAGGAAAcgtccaaaaaaa
taaataagaaaaatattggGACGTGAAGATATTGATGAGAGGAGATGATT
GATATCTCGCACGCAAGCAGAGAAAACATTCCCTCTAGATAACttgtttg
tttatttacttttccaggcaaaaaccaaaaaaaagaaaaacaacacatTG
AGAGGATGTATGACGGAGAATAAACACGATCAAGGAAGGCAATGAATGAA
GAAAAGTTTTCCGCTTGGATAGCCTGCTCAAGATTGTGGTTGTCATCCTT
TGTTGTATGGAAATGAGATTTCACTTTCATGTTTTAATGCAAACAATTCT
ACTTCTTCTTCAGTCTTTTCAAAATTCGATGATGGTGCAGACTTCAAGAG
CTTTGTTTTATTTACCTCAACACATGGATATGCTTACTGTACGTAACCAT
GGCAACTCATCCATGATGGTAAACGTGGGAGAATCATTGAATGCCATGTT
AAACGCAAGCATGACAGAAAACGTTGAAGATTTCGGTCTCAGTTTTTTAA
ACAAGAAGAATGCGAATATTGTGTCAGAACTGAAGAAGTTTGAGGGGAAA
ATGATGTACAGATTTGATAAAAACCTTTGCAAGTTTGtaagttttttata
tttcttttaaaagatttttataagTTCTTAAGTTCTTTTGATTGGGAAGT
CGAAGTTTTATCGGTTGGACAGACTTAAATAGCTCTTTTTTCATGGAAGG
GAAATCATTCAACCGCACTCTTCGTCTTCTTCACATTATGCAACAAACAA
CAAAAGCAAATGGGAATTcgcaataaaattttaaaattttctgacctGCC
TACACAGAAGCTACTTTTGTAAAATTCTCGAAAAGAAACGGCCTCGGCAA
TGCTTTTTAAGGGCAGAATTTACTGCATACCCAACTTTCATTCGTAATCC
GATCAACCAAAAATATGAAACGTTTTTCAGTCCATTTTATTGGGGTAAAG
TTATCATCGGATGAACCCAGCTCAGCAATTTCAGCTGCTGAGACttgagg
aaaaaaatattttttatattgggGTTTGATAAAATACGAAATTGGTCCAA
AAAGTGACAAAGTTAGGAGgacatttttaacatttttcggTCGCATAGga
accaaaaaaataatattagaaGGGAACAAAGCGACTTCTAAGGACACGAA
GGAAATTTTCATGCTTTAATTAATtaatcaaaaaaacaaaaagttgaaaa
gggacCTTAGaggaattttttattatttttttttacactttggGGAAAAT
ATACCcctttttcaaccaaaaaaaaacattgtgcTATATATCCAAAATAT
TGATAATTATATTAGCCAAAGGTACTTGAAAGTTGTACGCTACAGTTCAT
TTTTAAATGATAATATTAAAgataatgttttgaaaaagcaCTTCCTCAAA
GTCTCAAAAATGAATAATTGTCGTGTTGAACAGTCACAAAAATATTGTAA
ACACAAAAACTTTCCCGGgcagttcgaataagcgagaggctactgtataa
aaatatttcagtcaaagaattctaaaataatttaaaaggTTAAAAGGTTA
TCAtcatttgttcttataaaaaattattaacattttaattaatatttttt
ggaaaataagtCTGATATGGATTATTCCTGAACAGACTAAGTAATCTGAT
ATGAACCTTAAAGTAGCAATGATATATTGGGTTTTAAAGGAAAAGCATTT
GAGAATCACCCTCTTAAGAATATCGCACAAGGGATAAAAATTAATCTGTA
ATCTGGTTTAAGGGTAAAAATTGAAAGCTAAAAATGAGAAGAGATAGTTG
ATTATACGAAATTATCCGAAACTTTACACTATACGAGCCATAAAGGTCAT
AGAGAAAAAACACGAAGAATGTAAATCGAAGGTTTAAaggaaatgaaaag
ttttgagGTGCGCAGTGGGAGCCCAAAAGAGACTGCAAATGTTTTGCCCT
CTCCCAATTATTGCTTTCATTAAACATTACGTAAACTCTTCGATATAATG
AGCACTCGTTCTTTTTTGCAATGAGAAAGAGAAGGGGGTAGTTATCATAA
AAATAATCTGTGCGTAGGCCACAACttttccttttcaaacattttcgtta
aaatagaaaaataatctCATCTGCGACCATCGTGTAAATGAAATGTCACC
GTGATGTTATGATTGCTTTGAAACAGTAACATTAACCACTCTCTGAatcg
attttctttttttcagaggGACTCAAACAAGCCAGAAAGTTGTTACCCAC
AGTACAGAGAAGCACTGGATGGAATCTATCATTACTTCCGCTTCTCCAAA
TCCATCATCATTCACACTATGTCTCCCTGTGATGCACAAATATTGCAAAC
GCtcaacaaaacattcgaatctcgCTCATCCAGTACAATACAAGAAGCGG
TCGTCAACTTGGACTCACTGACCCAAGATATTTCGAAACTCGTTTATCAA
ATCAAAGTGTCTGGAGTAGATTTAGTAATAAGCCTCCTTGAGCCATCTTT
AACAGAGATGGTGTTGGAGGCGGCTTCGAGGTACGAACTTTTAGACTACT
CCTTAATTTGGATCACACTTTCGCTTCATCAACACATTGCGCATGTGCAA
ACAAAACAGTTACCATGGCAATGGATAGACTTTCGATTGGAAGAAGCCAA
CATGGAAACCGAATCAATCAAACAAAGCGTGGAAGAAACAGAGAGAACAC
TACAAAACACAACCTTCGAAAACACGTAAGTTAATACGGAAATTACGTGA
CTGAGCTTTTTGCACCTGAGAAGGCTAGCAGCAATTAAAATTCATctttc
tatgaaaaaaattatggtCCATAGGAACACGGTATACATTATGTGATGGA
GTTCATCACTAAGGATgcaatcttgaaaaaaaatattgaaaaaaaaacaa
aaggaatCGTATTCAAAATGAAGTAAAGCCTCCCTTCCCTCCCTCTCCCC
AAATTGCAATAACCATTGTGCACGAGTTTTTGTCTCACTTTCCATTGAAC
ATTAGCGAGCGAGTTTATATATTTACACTTTTGAGGCCGTCGTTCTCATT
CAGTCAGGATGTAGGCAAATTAGATGCTCATCGTCTCCGTtacagaaaaa
taaatgcataaactcgctaatcTTGTCTCGATAATTAATCAATGAAAAAA
GCCCTCTAAGTCAAATTCAACTGATATAGAAGAAAAGAATAGAAGAGAGA
ACTTAAACGAGATGAATCANAATGAAAAAAGCCCTCTAAGTCCAATTCAA
CTGATATAGAAGAAAAGAATAGAAGAGAGAACTTAAACGAGATGAATCAT
AAAACCCTATCTACTTTTACTCTCAACAGGTCCGACATACTTGAAATGGA
ATTCCCGAGATGCGATGAAAGCAAACAAAAGATCAGTATATACGCGCGAA
ATTCATCCACGGATGACGTCATTACTTGGGGTTTGATCTCCGAATGGACT
AGTCAGAGGGGGATACACGTTTATCCTAACGCAAACTTATTAGTTCGAAT
GATTCGTATAAAGACCTCTTTAACAACATTGAGAATAGCAACTGTTTTGG
ATGACCCCTTCGCATCTTACGCCCCTCATTTATACAACCCGAACAAAGGA
GGTAGTTGTGACCAGGGCTTGATTTGTCGGACAGCCGCAAAAGGGTATCC
GAGCGACCATCCTGATAAATGGGAGAATAAATGTTGCGTTGGAATGGCCA
TTGATCTCATCGAGTTGATTTCAGAGGAACTTTATTTCACACCTGACTTG
TACATAGTCGAAGATGGTTTTTACGGAGGCAAAGATAAAAACACGAGCGA
ATGGAACGGACTTGTCAGAGATGTGCAGCTTCATAAAGCGGATATCGCAA
TCGCGGCGCTCACTGCCACCGCCGATCGACTGAAGATAGTGGATTTCTGT
GAACCTTTTCTTTTGACCGACCTCGGAATCATGATTTCAACAATTCACGA
CCAATTAGACTTCATCAATTGGGAATTCTTAGCACCTTTATCAACGCGAT
TGAGAGTTTGGATCCTGGTCACTTTTATCATTGGTGTTTACTTGATCTAC
ATTCTGGAGAACCAACATTTGGTGTTACAGCGCATCATTGATAAGGGTGT
GTTTCCACGGTATCAATGGAGAGAGGGTTTCTCTTATTTCTCTGGACTGA
CATTTCAAAGAGATTTAGGGGGAAAGAATCCACAACGAGCGGGAGCCAGG
GTGACTGCGGTGGCATTTGCTTTCGGTATGGTAATCATCATGACAACATA
CACAGCCGTTCTGACTGCCTCCAAAGTCTCTCAATCTACCTCCAATCCGT
TCCATGGCTTTGACGACGAAAGGGTAGGCTATTGGttatttatttgaaac
tttctttGGATACGCTTTTATATACTTTAttgtaaaacaattaaaaactA
TAACAGCACTGCAACTATATCAACAGCAAATCTCAAACGCAAAGGTCTCG
TCATTCTAGCCTTCACTTTAGCGTCGGTGCATAAGGTTGAGGTTTACGAG
TTGTTATAGATAATTTCAAATTAAAGTTGGATTTACATCACAATTCCTCG
AAATTCAATATTCTGCTCCATAGTGAGTATTTCTCATTTTATTCCAGGTG
CGAAATCCATCATCAGACTTCAAATTCGGAACAGTTTCTCACACCAGTAT
GGAATCTTTCTTCAAGAACTCCAGAGATGACATTCATCAACGAATGTTCC
GTTTCATGCTCAACTACAATGTCAATCAATCTCTCGAAGGAATCGATATG
GTCAGAAAAGGGTGAGTTCACTTCTTCTCTCTCAAATATCTCTTTTGGTA
TGGATTTCCTTCAAGTATTTATACCGATATCTTAGCAACAAAGCGAAACT
TTATGCTTCATCAGACTTTCGAAAACATAAGGTATTGTGAATATTAAAAT
TTCTAAACTACATTATCCCTCCAACGAGGGTTACGTGCAGCAACTGAATC
TTGATATACTTGTGGGATTGAAGAAAACAAATTGAAACAGGGATAGGGAC
GGTCCAATATCAAGTACTCGAAAAGGACATTTGtcttctttttcagaaaa
ttgaacGCATTTATTCATGAGACACCATTCTTGACATACCACGCTTCAAA
ACAATCAGATTGCAGCTTGAAAATTTTCGGCAATTTGAACCAAGGAGGAT
ACGCGTTCAGCGTGCCCAAGAACTCTGTCTGGAAACATCTTCTTTCGCAA
GCAGTTTTGAAACTGAAAGAGCAAGAGACAATTGAAGACCTTTACAAGAA
ATGGTTCCCTTTTTCGTGTGCTAACAATGGAACGAGTTCAGAGTACGAAC
CTGTACAGATCAATTATTTCGGTGGCTTGTTCTTCATTTTATTGCTAGTC
CTCATTTTGTCCTTATTTCTGTTGGGAGGCGAACATTTTTGTTACCGACA
CCACCGAAGAGTCATCAACCCCATCCAGGATAAAGTCCAAGTGTGGAGAG
AAACCAAAGCGACTGAGCGGCGCAACGCGATTATCAATCCAGACGACATC
AGTCGCCTTCAACAACTTCATCAGAACGGGATGCTCGGTCAGAAAGATCC
GGTGGAATCGGCCGAATCATCTTCAGAGGGAGATATCAGCGAAGGAGAAG
AGGAGTTGATCCGAATGAGACTCGGAAGAAGGAACGTCACTCGAACAAGC
GTCGCCTCTTCCGTACAACGCACAAGCTTAGATTCTTTAGGTCAATATTT
CGCAACGGACGCAGCTCAACGTAGGCGAGGGTctagactagatttaacat
caATCAAAAAATCATCCAATTTCGACATGGGCTTATCCACGACTTTAGAG
CTTAGTGAAATCAGCAATATAAGTGAAGCTAACAACGAAGATTGTGAATC
TTTGAGAAGCTCTTCGGCCAGTAGCTTATGCTCTAACGCCACTTTACCAA
ATATAAATCCCAAAGAATCGTCACGTGACATCAATAACCAATCAGATGTC
GAAGAAAAGGAAGATATAACTACGAAACAAAACACAGAACAAATCCCTTC
GCCTGAAACAGAGAACAGCTCTTTAGAGCTTAGCAACAGTGAAACAAAAC
TCATCCCCAATGGGGTCCCCATTATTGTGTTGCCAAATAACAAAGAGAAA
AATGTCATAACGAAACCAAAACATCAAACAAACGGCCATGTAACGATTGA
AATcgtccatgatgaaaatattttacaggACTCGGGCACTGTTATTGCTA
ATGGACACACGTATCAACTAAATAGCACGGACGACGATAAAGTCCCTCAG
CAATGGAACGGTTTCGCGAATGGGAGCGTCCACGAAGATTCATTCGACGA
AAAAACGAATATTAATGAATACAGTAAGAGCAAGGAAATAAAACATTCAA
GCGATAAAAGATCTTtcggaaaaaagaaaatttcaaacggAATAATCAAA
ACGAGAGATTTTAGTATAGTTGATATTCCCGAATCTGTATTACCTTATAA
caactttttcgaaaataataatGTTGTTGGGGGAATAACGACAAGCAgtg
aaattgatttgaaaaaagaaaaacaaataaatcaTCGGAAAGCTCGAAGA
AGAACGTTACCAATAATTCAAACTAGCAGTTTCGTCTAGTAGTTGTAGTC
CTCTTCTTagctttattatttaattttctatAGTAAAAGACAAATAATTG
AGTGCTTGATAAATCGTACCTTCTCTTAAACATTTTCTTCACTAAACACA
GGTTAGAATCTACTAGAATTGGAAAAGGTTATTAAGCCGAATAGTGACCT
TTTCTTCCAAGCATATCTAATTATTTATTATAAAG

Coding sequence (CDS) from alignment at sc0000300:17520..24554+

>TCONS_00018412 ID=TCONS_00018412|Name=TCONS_00018412|organism=Clytia hemisphaerica|type=CDS|length=17700bp|location=Sequence derived from alignment at sc0000300:17520..24554+ (Clytia hemisphaerica)
ATGGAAATGAGATTTCACTTTCATGTTTTAATGCAAACAATTCTACTTCT
TCTTCAGTCTTTTCAAAATTCGATGATGGTGCAGACTTCAAGAGCTTTGT
TTTATTTACCTCAACACATGGATATGCTTACTGTACGTAACCATGGCAAC
TCATCCATGATGGTAAACGTGGGAGAATCATTGAATGCCATGTTAAACGC
AAGCATGACAGAAAACGTTGAAGATTTCGGTCTCAGTTTTTTAAACAAGA
AGAATGCGAATATTGTGTCAGAACTGAAGAAGTTTGAGGGGAAAATGATG
TACAGATTTGATAAAAACCTTTGCAAGTTTaggGACTCAAACAAGCCAGA
AAGTTGTTACCCACAGTACAGAGAAGCACTGGATGGAATCTATCATTACT
TCCGCTTCTCCAAATCCATCATCATTCACACTATGTCTCCCTGTGATGCA
CAAATATTGCAAACGCtcaacaaaacattcgaatctcgCTCATCCAGTAC
AATACAAGAAGCGGTCGTCAACTTGGACTCACTGACCCAAGATATTTCGA
AACTCGTTTATCAAATCAAAGTGTCTGGAGTAGATTTAGTAATAAGCCTC
CTTGAGCCATCTTTAACAGAGATGGTGTTGGAGGCGGCTTCGAGGTACGA
ACTTTTAGACTACTCCTTAATTTGGATCACACTTTCGCTTCATCAACACA
TTGCGCATGTGCAAACAAAACAGTTACCATGGCAATGGATAGACTTTCGA
TTGGAAGAAGCCAACATGGAAACCGAATCAATCAAACAAAGCGTGGAAGA
AACAGAGAGAACACTACAAAACACAACCTTCGAAAACACGTCCGACATAC
TTGAAATGGAATTCCCGAGATGCGATGAAAGCAAACAAAAGATCAGTATA
TACGCGCGAAATTCATCCACGGATGACGTCATTACTTGGGGTTTGATCTC
CGAATGGACTAGTCAGAGGGGGATACACGTTTATCCTAACGCAAACTTAT
TAGTTCGAATGATTCGTATAAAGACCTCTTTAACAACATTGAGAATAGCA
ACTGTTTTGGATGACCCCTTCGCATCTTACGCCCCTCATTTATACAACCC
GAACAAAGGAGGTAGTTGTGACCAGGGCTTGATTTGTCGGACAGCCGCAA
AAGGGTATCCGAGCGACCATCCTGATAAATGGGAGAATAAATGTTGCGTT
GGAATGGCCATTGATCTCATCGAGTTGATTTCAGAGGAACTTTATTTCAC
ACCTGACTTGTACATAGTCGAAGATGGTTTTTACGGAGGCAAAGATAAAA
ACACGAGCGAATGGAACGGACTTGTCAGAGATGTGCAGCTTCATAAAGCG
GATATCGCAATCGCGGCGCTCACTGCCACCGCCGATCGACTGAAGATAGT
GGATTTCTGTGAACCTTTTCTTTTGACCGACCTCGGAATCATGATTTCAA
CAATTCACGACCAATTAGACTTCATCAATTGGGAATTCTTAGCACCTTTA
TCAACGCGATTGAGAGTTTGGATCCTGGTCACTTTTATCATTGGTGTTTA
CTTGATCTACATTCTGGAGAACCAACATTTGGTGTTACAGCGCATCATTG
ATAAGGGTGTGTTTCCACGGTATCAATGGAGAGAGGGTTTCTCTTATTTC
TCTGGACTGACATTTCAAAGAGATTTAGGGGGAAAGAATCCACAACGAGC
GGGAGCCAGGGTGACTGCGGTGGCATTTGCTTTCGGTATGGTAATCATCA
TGACAACATACACAGCCGTTCTGACTGCCTCCAAAGTCTCTCAATCTACC
TCCAATCCGTTCCATGGCTTTGACGACGAAAGGGTGCGAAATCCATCATC
AGACTTCAAATTCGGAACAGTTTCTCACACCAGTATGGAATCTTTCTTCA
AGAACTCCAGAGATGACATTCATCAACGAATGTTCCGTTTCATGCTCAAC
TACAATGTCAATCAATCTCTCGAAGGAATCGATATGGTCAGAAAAGGaaa
attgaacGCATTTATTCATGAGACACCATTCTTGACATACCACGCTTCAA
AACAATCAGATTGCAGCTTGAAAATTTTCGGCAATTTGAACCAAGGAGGA
TACGCGTTCAGCGTGCCCAAGAACTCTGTCTGGAAACATCTTCTTTCGCA
AGCAGTTTTGAAACTGAAAGAGCAAGAGACAATTGAAGACCTTTACAAGA
AATGGTTCCCTTTTTCGTGTGCTAACAATGGAACGAGTTCAGAGTACGAA
CCTGTACAGATCAATTATTTCGGTGGCTTGTTCTTCATTTTATTGCTAGT
CCTCATTTTGTCCTTATTTCTGTTGGGAGGCGAACATTTTTGTTACCGAC
ACCACCGAAGAGTCATCAACCCCATCCAGGATAAAGTCCAAGTGTGGAGA
GAAACCAAAGCGACTGAGCGGCGCAACGCGATTATCAATCCAGACGACAT
CAGTCGCCTTCAACAACTTCATCAGAACGGGATGCTCGGTCAGAAAGATC
CGGTGGAATCGGCCGAATCATCTTCAGAGGGAGATATCAGCGAAGGAGAA
GAGGAGTTGATCCGAATGAGACTCGGAAGAAGGAACGTCACTCGAACAAG
CGTCGCCTCTTCCGTACAACGCACAAGCTTAGATTCTTTAGGTCAATATT
TCGCAACGGACGCAGCTCAACGTAGGCGAGGGTctagactagatttaaca
tcaATCAAAAAATCATCCAATTTCGACATGGGCTTATCCACGACTTTAGA
GCTTAGTGAAATCAGCAATATAAGTGAAGCTAACAACGAAGATTGTGAAT
CTTTGAGAAGCTCTTCGGCCAGTAGCTTATGCTCTAACGCCACTTTACCA
AATATAAATCCCAAAGAATCGTCACGTGACATCAATAACCAATCAGATGT
CGAAGAAAAGGAAGATATAACTACGAAACAAAACACAGAACAAATCCCTT
CGCCTGAAACAGAGAACAGCTCTTTAGAGCTTAGCAACAGTGAAACAAAA
CTCATCCCCAATGGGGTCCCCATTATTGTGTTGCCAAATAACAAAGAGAA
AAATGTCATAACGAAACCAAAACATCAAACAAACGGCCATGTAACGATTG
AAATcgtccatgatgaaaatattttacaggACTCGGGCACTGTTATTGCT
AATGGACACACGTATCAACTAAATAGCACGGACGACGATAAAGTCCCTCA
GCAATGGAACGGTTTCGCGAATGGGAGCGTCCACGAAGATTCATTCGACG
AAAAAACGAATATTAATGAATACAGTAAGAGCAAGGAAATAAAACATTCA
AGCGATAAAAGATCTTtcggaaaaaagaaaatttcaaacggAATAATCAA
AACGAGAGATTTTAGTATAGTTGATATTCCCGAATCTGTATTACCTTATA
AcaactttttcgaaaataataatGTTGTTGGGGGAATAACGACAAGCAgt
gaaattgatttgaaaaaagaaaaacaaataaatcaTCGGAAAGCTCGAAG
AAGAACGTTACCAATAATTCAAACTAGCAGTTTCGTCTAGATGGAAATGA
GATTTCACTTTCATGTTTTAATGCAAACAATTCTACTTCTTCTTCAGTCT
TTTCAAAATTCGATGATGGTGCAGACTTCAAGAGCTTTGTTTTATTTACC
TCAACACATGGATATGCTTACTGTACGTAACCATGGCAACTCATCCATGA
TGGTAAACGTGGGAGAATCATTGAATGCCATGTTAAACGCAAGCATGACA
GAAAACGTTGAAGATTTCGGTCTCAGTTTTTTAAACAAGAAGAATGCGAA
TATTGTGTCAGAACTGAAGAAGTTTGAGGGGAAAATGATGTACAGATTTG
ATAAAAACCTTTGCAAGTTTaggGACTCAAACAAGCCAGAAAGTTGTTAC
CCACAGTACAGAGAAGCACTGGATGGAATCTATCATTACTTCCGCTTCTC
CAAATCCATCATCATTCACACTATGTCTCCCTGTGATGCACAAATATTGC
AAACGCtcaacaaaacattcgaatctcgCTCATCCAGTACAATACAAGAA
GCGGTCGTCAACTTGGACTCACTGACCCAAGATATTTCGAAACTCGTTTA
TCAAATCAAAGTGTCTGGAGTAGATTTAGTAATAAGCCTCCTTGAGCCAT
CTTTAACAGAGATGGTGTTGGAGGCGGCTTCGAGGTACGAACTTTTAGAC
TACTCCTTAATTTGGATCACACTTTCGCTTCATCAACACATTGCGCATGT
GCAAACAAAACAGTTACCATGGCAATGGATAGACTTTCGATTGGAAGAAG
CCAACATGGAAACCGAATCAATCAAACAAAGCGTGGAAGAAACAGAGAGA
ACACTACAAAACACAACCTTCGAAAACACGTCCGACATACTTGAAATGGA
ATTCCCGAGATGCGATGAAAGCAAACAAAAGATCAGTATATACGCGCGAA
ATTCATCCACGGATGACGTCATTACTTGGGGTTTGATCTCCGAATGGACT
AGTCAGAGGGGGATACACGTTTATCCTAACGCAAACTTATTAGTTCGAAT
GATTCGTATAAAGACCTCTTTAACAACATTGAGAATAGCAACTGTTTTGG
ATGACCCCTTCGCATCTTACGCCCCTCATTTATACAACCCGAACAAAGGA
GGTAGTTGTGACCAGGGCTTGATTTGTCGGACAGCCGCAAAAGGGTATCC
GAGCGACCATCCTGATAAATGGGAGAATAAATGTTGCGTTGGAATGGCCA
TTGATCTCATCGAGTTGATTTCAGAGGAACTTTATTTCACACCTGACTTG
TACATAGTCGAAGATGGTTTTTACGGAGGCAAAGATAAAAACACGAGCGA
ATGGAACGGACTTGTCAGAGATGTGCAGCTTCATAAAGCGGATATCGCAA
TCGCGGCGCTCACTGCCACCGCCGATCGACTGAAGATAGTGGATTTCTGT
GAACCTTTTCTTTTGACCGACCTCGGAATCATGATTTCAACAATTCACGA
CCAATTAGACTTCATCAATTGGGAATTCTTAGCACCTTTATCAACGCGAT
TGAGAGTTTGGATCCTGGTCACTTTTATCATTGGTGTTTACTTGATCTAC
ATTCTGGAGAACCAACATTTGGTGTTACAGCGCATCATTGATAAGGGTGT
GTTTCCACGGTATCAATGGAGAGAGGGTTTCTCTTATTTCTCTGGACTGA
CATTTCAAAGAGATTTAGGGGGAAAGAATCCACAACGAGCGGGAGCCAGG
GTGACTGCGGTGGCATTTGCTTTCGGTATGGTAATCATCATGACAACATA
CACAGCCGTTCTGACTGCCTCCAAAGTCTCTCAATCTACCTCCAATCCGT
TCCATGGCTTTGACGACGAAAGGGTGCGAAATCCATCATCAGACTTCAAA
TTCGGAACAGTTTCTCACACCAGTATGGAATCTTTCTTCAAGAACTCCAG
AGATGACATTCATCAACGAATGTTCCGTTTCATGCTCAACTACAATGTCA
ATCAATCTCTCGAAGGAATCGATATGGTCAGAAAAGGaaaattgaacGCA
TTTATTCATGAGACACCATTCTTGACATACCACGCTTCAAAACAATCAGA
TTGCAGCTTGAAAATTTTCGGCAATTTGAACCAAGGAGGATACGCGTTCA
GCGTGCCCAAGAACTCTGTCTGGAAACATCTTCTTTCGCAAGCAGTTTTG
AAACTGAAAGAGCAAGAGACAATTGAAGACCTTTACAAGAAATGGTTCCC
TTTTTCGTGTGCTAACAATGGAACGAGTTCAGAGTACGAACCTGTACAGA
TCAATTATTTCGGTGGCTTGTTCTTCATTTTATTGCTAGTCCTCATTTTG
TCCTTATTTCTGTTGGGAGGCGAACATTTTTGTTACCGACACCACCGAAG
AGTCATCAACCCCATCCAGGATAAAGTCCAAGTGTGGAGAGAAACCAAAG
CGACTGAGCGGCGCAACGCGATTATCAATCCAGACGACATCAGTCGCCTT
CAACAACTTCATCAGAACGGGATGCTCGGTCAGAAAGATCCGGTGGAATC
GGCCGAATCATCTTCAGAGGGAGATATCAGCGAAGGAGAAGAGGAGTTGA
TCCGAATGAGACTCGGAAGAAGGAACGTCACTCGAACAAGCGTCGCCTCT
TCCGTACAACGCACAAGCTTAGATTCTTTAGGTCAATATTTCGCAACGGA
CGCAGCTCAACGTAGGCGAGGGTctagactagatttaacatcaATCAAAA
AATCATCCAATTTCGACATGGGCTTATCCACGACTTTAGAGCTTAGTGAA
ATCAGCAATATAAGTGAAGCTAACAACGAAGATTGTGAATCTTTGAGAAG
CTCTTCGGCCAGTAGCTTATGCTCTAACGCCACTTTACCAAATATAAATC
CCAAAGAATCGTCACGTGACATCAATAACCAATCAGATGTCGAAGAAAAG
GAAGATATAACTACGAAACAAAACACAGAACAAATCCCTTCGCCTGAAAC
AGAGAACAGCTCTTTAGAGCTTAGCAACAGTGAAACAAAACTCATCCCCA
ATGGGGTCCCCATTATTGTGTTGCCAAATAACAAAGAGAAAAATGTCATA
ACGAAACCAAAACATCAAACAAACGGCCATGTAACGATTGAAATcgtcca
tgatgaaaatattttacaggACTCGGGCACTGTTATTGCTAATGGACACA
CGTATCAACTAAATAGCACGGACGACGATAAAGTCCCTCAGCAATGGAAC
GGTTTCGCGAATGGGAGCGTCCACGAAGATTCATTCGACGAAAAAACGAA
TATTAATGAATACAGTAAGAGCAAGGAAATAAAACATTCAAGCGATAAAA
GATCTTtcggaaaaaagaaaatttcaaacggAATAATCAAAACGAGAGAT
TTTAGTATAGTTGATATTCCCGAATCTGTATTACCTTATAAcaacttttt
cgaaaataataatGTTGTTGGGGGAATAACGACAAGCAgtgaaattgatt
tgaaaaaagaaaaacaaataaatcaTCGGAAAGCTCGAAGAAGAACGTTA
CCAATAATTCAAACTAGCAGTTTCGTCTAGATGGAAATGAGATTTCACTT
TCATGTTTTAATGCAAACAATTCTACTTCTTCTTCAGTCTTTTCAAAATT
CGATGATGGTGCAGACTTCAAGAGCTTTGTTTTATTTACCTCAACACATG
GATATGCTTACTGTACGTAACCATGGCAACTCATCCATGATGGTAAACGT
GGGAGAATCATTGAATGCCATGTTAAACGCAAGCATGACAGAAAACGTTG
AAGATTTCGGTCTCAGTTTTTTAAACAAGAAGAATGCGAATATTGTGTCA
GAACTGAAGAAGTTTGAGGGGAAAATGATGTACAGATTTGATAAAAACCT
TTGCAAGTTTaggGACTCAAACAAGCCAGAAAGTTGTTACCCACAGTACA
GAGAAGCACTGGATGGAATCTATCATTACTTCCGCTTCTCCAAATCCATC
ATCATTCACACTATGTCTCCCTGTGATGCACAAATATTGCAAACGCtcaa
caaaacattcgaatctcgCTCATCCAGTACAATACAAGAAGCGGTCGTCA
ACTTGGACTCACTGACCCAAGATATTTCGAAACTCGTTTATCAAATCAAA
GTGTCTGGAGTAGATTTAGTAATAAGCCTCCTTGAGCCATCTTTAACAGA
GATGGTGTTGGAGGCGGCTTCGAGGTACGAACTTTTAGACTACTCCTTAA
TTTGGATCACACTTTCGCTTCATCAACACATTGCGCATGTGCAAACAAAA
CAGTTACCATGGCAATGGATAGACTTTCGATTGGAAGAAGCCAACATGGA
AACCGAATCAATCAAACAAAGCGTGGAAGAAACAGAGAGAACACTACAAA
ACACAACCTTCGAAAACACGTCCGACATACTTGAAATGGAATTCCCGAGA
TGCGATGAAAGCAAACAAAAGATCAGTATATACGCGCGAAATTCATCCAC
GGATGACGTCATTACTTGGGGTTTGATCTCCGAATGGACTAGTCAGAGGG
GGATACACGTTTATCCTAACGCAAACTTATTAGTTCGAATGATTCGTATA
AAGACCTCTTTAACAACATTGAGAATAGCAACTGTTTTGGATGACCCCTT
CGCATCTTACGCCCCTCATTTATACAACCCGAACAAAGGAGGTAGTTGTG
ACCAGGGCTTGATTTGTCGGACAGCCGCAAAAGGGTATCCGAGCGACCAT
CCTGATAAATGGGAGAATAAATGTTGCGTTGGAATGGCCATTGATCTCAT
CGAGTTGATTTCAGAGGAACTTTATTTCACACCTGACTTGTACATAGTCG
AAGATGGTTTTTACGGAGGCAAAGATAAAAACACGAGCGAATGGAACGGA
CTTGTCAGAGATGTGCAGCTTCATAAAGCGGATATCGCAATCGCGGCGCT
CACTGCCACCGCCGATCGACTGAAGATAGTGGATTTCTGTGAACCTTTTC
TTTTGACCGACCTCGGAATCATGATTTCAACAATTCACGACCAATTAGAC
TTCATCAATTGGGAATTCTTAGCACCTTTATCAACGCGATTGAGAGTTTG
GATCCTGGTCACTTTTATCATTGGTGTTTACTTGATCTACATTCTGGAGA
ACCAACATTTGGTGTTACAGCGCATCATTGATAAGGGTGTGTTTCCACGG
TATCAATGGAGAGAGGGTTTCTCTTATTTCTCTGGACTGACATTTCAAAG
AGATTTAGGGGGAAAGAATCCACAACGAGCGGGAGCCAGGGTGACTGCGG
TGGCATTTGCTTTCGGTATGGTAATCATCATGACAACATACACAGCCGTT
CTGACTGCCTCCAAAGTCTCTCAATCTACCTCCAATCCGTTCCATGGCTT
TGACGACGAAAGGGTGCGAAATCCATCATCAGACTTCAAATTCGGAACAG
TTTCTCACACCAGTATGGAATCTTTCTTCAAGAACTCCAGAGATGACATT
CATCAACGAATGTTCCGTTTCATGCTCAACTACAATGTCAATCAATCTCT
CGAAGGAATCGATATGGTCAGAAAAGGaaaattgaacGCATTTATTCATG
AGACACCATTCTTGACATACCACGCTTCAAAACAATCAGATTGCAGCTTG
AAAATTTTCGGCAATTTGAACCAAGGAGGATACGCGTTCAGCGTGCCCAA
GAACTCTGTCTGGAAACATCTTCTTTCGCAAGCAGTTTTGAAACTGAAAG
AGCAAGAGACAATTGAAGACCTTTACAAGAAATGGTTCCCTTTTTCGTGT
GCTAACAATGGAACGAGTTCAGAGTACGAACCTGTACAGATCAATTATTT
CGGTGGCTTGTTCTTCATTTTATTGCTAGTCCTCATTTTGTCCTTATTTC
TGTTGGGAGGCGAACATTTTTGTTACCGACACCACCGAAGAGTCATCAAC
CCCATCCAGGATAAAGTCCAAGTGTGGAGAGAAACCAAAGCGACTGAGCG
GCGCAACGCGATTATCAATCCAGACGACATCAGTCGCCTTCAACAACTTC
ATCAGAACGGGATGCTCGGTCAGAAAGATCCGGTGGAATCGGCCGAATCA
TCTTCAGAGGGAGATATCAGCGAAGGAGAAGAGGAGTTGATCCGAATGAG
ACTCGGAAGAAGGAACGTCACTCGAACAAGCGTCGCCTCTTCCGTACAAC
GCACAAGCTTAGATTCTTTAGGTCAATATTTCGCAACGGACGCAGCTCAA
CGTAGGCGAGGGTctagactagatttaacatcaATCAAAAAATCATCCAA
TTTCGACATGGGCTTATCCACGACTTTAGAGCTTAGTGAAATCAGCAATA
TAAGTGAAGCTAACAACGAAGATTGTGAATCTTTGAGAAGCTCTTCGGCC
AGTAGCTTATGCTCTAACGCCACTTTACCAAATATAAATCCCAAAGAATC
GTCACGTGACATCAATAACCAATCAGATGTCGAAGAAAAGGAAGATATAA
CTACGAAACAAAACACAGAACAAATCCCTTCGCCTGAAACAGAGAACAGC
TCTTTAGAGCTTAGCAACAGTGAAACAAAACTCATCCCCAATGGGGTCCC
CATTATTGTGTTGCCAAATAACAAAGAGAAAAATGTCATAACGAAACCAA
AACATCAAACAAACGGCCATGTAACGATTGAAATcgtccatgatgaaaat
attttacaggACTCGGGCACTGTTATTGCTAATGGACACACGTATCAACT
AAATAGCACGGACGACGATAAAGTCCCTCAGCAATGGAACGGTTTCGCGA
ATGGGAGCGTCCACGAAGATTCATTCGACGAAAAAACGAATATTAATGAA
TACAGTAAGAGCAAGGAAATAAAACATTCAAGCGATAAAAGATCTTtcgg
aaaaaagaaaatttcaaacggAATAATCAAAACGAGAGATTTTAGTATAG
TTGATATTCCCGAATCTGTATTACCTTATAAcaactttttcgaaaataat
aatGTTGTTGGGGGAATAACGACAAGCAgtgaaattgatttgaaaaaaga
aaaacaaataaatcaTCGGAAAGCTCGAAGAAGAACGTTACCAATAATTC
AAACTAGCAGTTTCGTCTAGATGGAAATGAGATTTCACTTTCATGTTTTA
ATGCAAACAATTCTACTTCTTCTTCAGTCTTTTCAAAATTCGATGATGGT
GCAGACTTCAAGAGCTTTGTTTTATTTACCTCAACACATGGATATGCTTA
CTGTACGTAACCATGGCAACTCATCCATGATGGTAAACGTGGGAGAATCA
TTGAATGCCATGTTAAACGCAAGCATGACAGAAAACGTTGAAGATTTCGG
TCTCAGTTTTTTAAACAAGAAGAATGCGAATATTGTGTCAGAACTGAAGA
AGTTTGAGGGGAAAATGATGTACAGATTTGATAAAAACCTTTGCAAGTTT
aggGACTCAAACAAGCCAGAAAGTTGTTACCCACAGTACAGAGAAGCACT
GGATGGAATCTATCATTACTTCCGCTTCTCCAAATCCATCATCATTCACA
CTATGTCTCCCTGTGATGCACAAATATTGCAAACGCtcaacaaaacattc
gaatctcgCTCATCCAGTACAATACAAGAAGCGGTCGTCAACTTGGACTC
ACTGACCCAAGATATTTCGAAACTCGTTTATCAAATCAAAGTGTCTGGAG
TAGATTTAGTAATAAGCCTCCTTGAGCCATCTTTAACAGAGATGGTGTTG
GAGGCGGCTTCGAGGTACGAACTTTTAGACTACTCCTTAATTTGGATCAC
ACTTTCGCTTCATCAACACATTGCGCATGTGCAAACAAAACAGTTACCAT
GGCAATGGATAGACTTTCGATTGGAAGAAGCCAACATGGAAACCGAATCA
ATCAAACAAAGCGTGGAAGAAACAGAGAGAACACTACAAAACACAACCTT
CGAAAACACGTCCGACATACTTGAAATGGAATTCCCGAGATGCGATGAAA
GCAAACAAAAGATCAGTATATACGCGCGAAATTCATCCACGGATGACGTC
ATTACTTGGGGTTTGATCTCCGAATGGACTAGTCAGAGGGGGATACACGT
TTATCCTAACGCAAACTTATTAGTTCGAATGATTCGTATAAAGACCTCTT
TAACAACATTGAGAATAGCAACTGTTTTGGATGACCCCTTCGCATCTTAC
GCCCCTCATTTATACAACCCGAACAAAGGAGGTAGTTGTGACCAGGGCTT
GATTTGTCGGACAGCCGCAAAAGGGTATCCGAGCGACCATCCTGATAAAT
GGGAGAATAAATGTTGCGTTGGAATGGCCATTGATCTCATCGAGTTGATT
TCAGAGGAACTTTATTTCACACCTGACTTGTACATAGTCGAAGATGGTTT
TTACGGAGGCAAAGATAAAAACACGAGCGAATGGAACGGACTTGTCAGAG
ATGTGCAGCTTCATAAAGCGGATATCGCAATCGCGGCGCTCACTGCCACC
GCCGATCGACTGAAGATAGTGGATTTCTGTGAACCTTTTCTTTTGACCGA
CCTCGGAATCATGATTTCAACAATTCACGACCAATTAGACTTCATCAATT
GGGAATTCTTAGCACCTTTATCAACGCGATTGAGAGTTTGGATCCTGGTC
ACTTTTATCATTGGTGTTTACTTGATCTACATTCTGGAGAACCAACATTT
GGTGTTACAGCGCATCATTGATAAGGGTGTGTTTCCACGGTATCAATGGA
GAGAGGGTTTCTCTTATTTCTCTGGACTGACATTTCAAAGAGATTTAGGG
GGAAAGAATCCACAACGAGCGGGAGCCAGGGTGACTGCGGTGGCATTTGC
TTTCGGTATGGTAATCATCATGACAACATACACAGCCGTTCTGACTGCCT
CCAAAGTCTCTCAATCTACCTCCAATCCGTTCCATGGCTTTGACGACGAA
AGGGTGCGAAATCCATCATCAGACTTCAAATTCGGAACAGTTTCTCACAC
CAGTATGGAATCTTTCTTCAAGAACTCCAGAGATGACATTCATCAACGAA
TGTTCCGTTTCATGCTCAACTACAATGTCAATCAATCTCTCGAAGGAATC
GATATGGTCAGAAAAGGaaaattgaacGCATTTATTCATGAGACACCATT
CTTGACATACCACGCTTCAAAACAATCAGATTGCAGCTTGAAAATTTTCG
GCAATTTGAACCAAGGAGGATACGCGTTCAGCGTGCCCAAGAACTCTGTC
TGGAAACATCTTCTTTCGCAAGCAGTTTTGAAACTGAAAGAGCAAGAGAC
AATTGAAGACCTTTACAAGAAATGGTTCCCTTTTTCGTGTGCTAACAATG
GAACGAGTTCAGAGTACGAACCTGTACAGATCAATTATTTCGGTGGCTTG
TTCTTCATTTTATTGCTAGTCCTCATTTTGTCCTTATTTCTGTTGGGAGG
CGAACATTTTTGTTACCGACACCACCGAAGAGTCATCAACCCCATCCAGG
ATAAAGTCCAAGTGTGGAGAGAAACCAAAGCGACTGAGCGGCGCAACGCG
ATTATCAATCCAGACGACATCAGTCGCCTTCAACAACTTCATCAGAACGG
GATGCTCGGTCAGAAAGATCCGGTGGAATCGGCCGAATCATCTTCAGAGG
GAGATATCAGCGAAGGAGAAGAGGAGTTGATCCGAATGAGACTCGGAAGA
AGGAACGTCACTCGAACAAGCGTCGCCTCTTCCGTACAACGCACAAGCTT
AGATTCTTTAGGTCAATATTTCGCAACGGACGCAGCTCAACGTAGGCGAG
GGTctagactagatttaacatcaATCAAAAAATCATCCAATTTCGACATG
GGCTTATCCACGACTTTAGAGCTTAGTGAAATCAGCAATATAAGTGAAGC
TAACAACGAAGATTGTGAATCTTTGAGAAGCTCTTCGGCCAGTAGCTTAT
GCTCTAACGCCACTTTACCAAATATAAATCCCAAAGAATCGTCACGTGAC
ATCAATAACCAATCAGATGTCGAAGAAAAGGAAGATATAACTACGAAACA
AAACACAGAACAAATCCCTTCGCCTGAAACAGAGAACAGCTCTTTAGAGC
TTAGCAACAGTGAAACAAAACTCATCCCCAATGGGGTCCCCATTATTGTG
TTGCCAAATAACAAAGAGAAAAATGTCATAACGAAACCAAAACATCAAAC
AAACGGCCATGTAACGATTGAAATcgtccatgatgaaaatattttacagg
ACTCGGGCACTGTTATTGCTAATGGACACACGTATCAACTAAATAGCACG
GACGACGATAAAGTCCCTCAGCAATGGAACGGTTTCGCGAATGGGAGCGT
CCACGAAGATTCATTCGACGAAAAAACGAATATTAATGAATACAGTAAGA
GCAAGGAAATAAAACATTCAAGCGATAAAAGATCTTtcggaaaaaagaaa
atttcaaacggAATAATCAAAACGAGAGATTTTAGTATAGTTGATATTCC
CGAATCTGTATTACCTTATAAcaactttttcgaaaataataatGTTGTTG
GGGGAATAACGACAAGCAgtgaaattgatttgaaaaaagaaaaacaaata
aatcaTCGGAAAGCTCGAAGAAGAACGTTACCAATAATTCAAACTAGCAG
TTTCGTCTAGATGGAAATGAGATTTCACTTTCATGTTTTAATGCAAACAA
TTCTACTTCTTCTTCAGTCTTTTCAAAATTCGATGATGGTGCAGACTTCA
AGAGCTTTGTTTTATTTACCTCAACACATGGATATGCTTACTGTACGTAA
CCATGGCAACTCATCCATGATGGTAAACGTGGGAGAATCATTGAATGCCA
TGTTAAACGCAAGCATGACAGAAAACGTTGAAGATTTCGGTCTCAGTTTT
TTAAACAAGAAGAATGCGAATATTGTGTCAGAACTGAAGAAGTTTGAGGG
GAAAATGATGTACAGATTTGATAAAAACCTTTGCAAGTTTaggGACTCAA
ACAAGCCAGAAAGTTGTTACCCACAGTACAGAGAAGCACTGGATGGAATC
TATCATTACTTCCGCTTCTCCAAATCCATCATCATTCACACTATGTCTCC
CTGTGATGCACAAATATTGCAAACGCtcaacaaaacattcgaatctcgCT
CATCCAGTACAATACAAGAAGCGGTCGTCAACTTGGACTCACTGACCCAA
GATATTTCGAAACTCGTTTATCAAATCAAAGTGTCTGGAGTAGATTTAGT
AATAAGCCTCCTTGAGCCATCTTTAACAGAGATGGTGTTGGAGGCGGCTT
CGAGGTACGAACTTTTAGACTACTCCTTAATTTGGATCACACTTTCGCTT
CATCAACACATTGCGCATGTGCAAACAAAACAGTTACCATGGCAATGGAT
AGACTTTCGATTGGAAGAAGCCAACATGGAAACCGAATCAATCAAACAAA
GCGTGGAAGAAACAGAGAGAACACTACAAAACACAACCTTCGAAAACACG
TCCGACATACTTGAAATGGAATTCCCGAGATGCGATGAAAGCAAACAAAA
GATCAGTATATACGCGCGAAATTCATCCACGGATGACGTCATTACTTGGG
GTTTGATCTCCGAATGGACTAGTCAGAGGGGGATACACGTTTATCCTAAC
GCAAACTTATTAGTTCGAATGATTCGTATAAAGACCTCTTTAACAACATT
GAGAATAGCAACTGTTTTGGATGACCCCTTCGCATCTTACGCCCCTCATT
TATACAACCCGAACAAAGGAGGTAGTTGTGACCAGGGCTTGATTTGTCGG
ACAGCCGCAAAAGGGTATCCGAGCGACCATCCTGATAAATGGGAGAATAA
ATGTTGCGTTGGAATGGCCATTGATCTCATCGAGTTGATTTCAGAGGAAC
TTTATTTCACACCTGACTTGTACATAGTCGAAGATGGTTTTTACGGAGGC
AAAGATAAAAACACGAGCGAATGGAACGGACTTGTCAGAGATGTGCAGCT
TCATAAAGCGGATATCGCAATCGCGGCGCTCACTGCCACCGCCGATCGAC
TGAAGATAGTGGATTTCTGTGAACCTTTTCTTTTGACCGACCTCGGAATC
ATGATTTCAACAATTCACGACCAATTAGACTTCATCAATTGGGAATTCTT
AGCACCTTTATCAACGCGATTGAGAGTTTGGATCCTGGTCACTTTTATCA
TTGGTGTTTACTTGATCTACATTCTGGAGAACCAACATTTGGTGTTACAG
CGCATCATTGATAAGGGTGTGTTTCCACGGTATCAATGGAGAGAGGGTTT
CTCTTATTTCTCTGGACTGACATTTCAAAGAGATTTAGGGGGAAAGAATC
CACAACGAGCGGGAGCCAGGGTGACTGCGGTGGCATTTGCTTTCGGTATG
GTAATCATCATGACAACATACACAGCCGTTCTGACTGCCTCCAAAGTCTC
TCAATCTACCTCCAATCCGTTCCATGGCTTTGACGACGAAAGGGTGCGAA
ATCCATCATCAGACTTCAAATTCGGAACAGTTTCTCACACCAGTATGGAA
TCTTTCTTCAAGAACTCCAGAGATGACATTCATCAACGAATGTTCCGTTT
CATGCTCAACTACAATGTCAATCAATCTCTCGAAGGAATCGATATGGTCA
GAAAAGGaaaattgaacGCATTTATTCATGAGACACCATTCTTGACATAC
CACGCTTCAAAACAATCAGATTGCAGCTTGAAAATTTTCGGCAATTTGAA
CCAAGGAGGATACGCGTTCAGCGTGCCCAAGAACTCTGTCTGGAAACATC
TTCTTTCGCAAGCAGTTTTGAAACTGAAAGAGCAAGAGACAATTGAAGAC
CTTTACAAGAAATGGTTCCCTTTTTCGTGTGCTAACAATGGAACGAGTTC
AGAGTACGAACCTGTACAGATCAATTATTTCGGTGGCTTGTTCTTCATTT
TATTGCTAGTCCTCATTTTGTCCTTATTTCTGTTGGGAGGCGAACATTTT
TGTTACCGACACCACCGAAGAGTCATCAACCCCATCCAGGATAAAGTCCA
AGTGTGGAGAGAAACCAAAGCGACTGAGCGGCGCAACGCGATTATCAATC
CAGACGACATCAGTCGCCTTCAACAACTTCATCAGAACGGGATGCTCGGT
CAGAAAGATCCGGTGGAATCGGCCGAATCATCTTCAGAGGGAGATATCAG
CGAAGGAGAAGAGGAGTTGATCCGAATGAGACTCGGAAGAAGGAACGTCA
CTCGAACAAGCGTCGCCTCTTCCGTACAACGCACAAGCTTAGATTCTTTA
GGTCAATATTTCGCAACGGACGCAGCTCAACGTAGGCGAGGGTctagact
agatttaacatcaATCAAAAAATCATCCAATTTCGACATGGGCTTATCCA
CGACTTTAGAGCTTAGTGAAATCAGCAATATAAGTGAAGCTAACAACGAA
GATTGTGAATCTTTGAGAAGCTCTTCGGCCAGTAGCTTATGCTCTAACGC
CACTTTACCAAATATAAATCCCAAAGAATCGTCACGTGACATCAATAACC
AATCAGATGTCGAAGAAAAGGAAGATATAACTACGAAACAAAACACAGAA
CAAATCCCTTCGCCTGAAACAGAGAACAGCTCTTTAGAGCTTAGCAACAG
TGAAACAAAACTCATCCCCAATGGGGTCCCCATTATTGTGTTGCCAAATA
ACAAAGAGAAAAATGTCATAACGAAACCAAAACATCAAACAAACGGCCAT
GTAACGATTGAAATcgtccatgatgaaaatattttacaggACTCGGGCAC
TGTTATTGCTAATGGACACACGTATCAACTAAATAGCACGGACGACGATA
AAGTCCCTCAGCAATGGAACGGTTTCGCGAATGGGAGCGTCCACGAAGAT
TCATTCGACGAAAAAACGAATATTAATGAATACAGTAAGAGCAAGGAAAT
AAAACATTCAAGCGATAAAAGATCTTtcggaaaaaagaaaatttcaaacg
gAATAATCAAAACGAGAGATTTTAGTATAGTTGATATTCCCGAATCTGTA
TTACCTTATAAcaactttttcgaaaataataatGTTGTTGGGGGAATAAC
GACAAGCAgtgaaattgatttgaaaaaagaaaaacaaataaatcaTCGGA
AAGCTCGAAGAAGAACGTTACCAATAATTCAAACTAGCAGTTTCGTCTAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_010329	XLOC_010329	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00018412-protein	TCONS_00018412-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000300	supercontig	sc0000300:17520..24554 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.019172	0.0467392	0.0325612	0.0424748	0	0.0204306	6.16215	6.81888	5.29104	6.03351	2.83587	6.21184	1.72134	1.37714	0.41913	0.362169	0.402985	0.774463	3.88243	5.3636	1.52927	1.19348	0.736404	0.979266	1.26592	2.06672	0.0525772	0.0140279	0.0212794	0.0542009

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR019594	Glu/Gly-bd
IPR001320	Iontro_rcpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005234	extracellular-glutamate-gated ion channel activity
GO:0004970	ionotropic glutamate receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0005234	extracellular-glutamate-gated ion channel activity
molecular_function	GO:0004970	ionotropic glutamate receptor activity

Blast

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BLAST of TCONS_00018412 vs. Swiss-Prot (Human)
Match: NMDE4 (Glutamate receptor ionotropic, NMDA 2D OS=Homo sapiens GN=GRIN2D PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.563e-36
Identity = 126/459 (27.45%), Postives = 209/459 (45.53%), Query Frame = 1

Query: 1108 TWGLISEWTSQRGIHVYPNANLLVRMIRIKTSLTTLRIATVLDDPFASYAPHLYNPNKGGSCDQGLICRTAAKGYPSDHPD--KWENKCCVGMAIDLIELISEELYFTPDLYIVEDGFYGGKDKNTSEWNGLVRDVQLHKXXXXXXXXXXXXXXXKIVDFCEPFLLTDLGIMISTIHDQLDFINWEFLAPLSTRLRVWIL----------VTFIIGVYLIYILENQHLVLQRIIDKGVFPRYQWREGFSYFS---------GLTFQRDLGGKNPQRAGARVTAVAFAFGMVIIMTTYTAVLTASKVSQSTSNPFHGFDDERVRNPSSDF---KFGTVSHTSMESFFKNSRDDIHQRMFRFMLNYNVNQSLEGIDMVRKGKLNAFIHETPFLTYHASKQSDCSLKIFGN---LNQGGYAFSVPKNSVWKHLLSQAVLKLKEQETIEDLYKKWFPFSCANN 2403
            TW ++  W  Q     YP  +   R ++       L +AT+ + PF    P   +P  G      + CR+      S  PD  + E +CC G  ID+++ ++  + F+ DLY+V +G +G K      WNG++ +V   +AD+AI +LT   +R +IVDF  PF+ T + +M++  +  +      FL P S    VW++          VT  I  YL  +  N+ L   +            R G S F+          L F   +  +NP+   +++  + +AF  VI + +YTA L A  + +   +   G  D + + P   +   KFGTV + S E   +++  D+H     +M+ YN  +  E +  ++ GKL+AFI++   L Y A K   C L   G+       GY  ++ K S WK  +  A+L+    + IE L + W    C N+
Sbjct:  397 TWEVVGSWEQQTLRLKYPLWSRYGRFLQPVDDTQHLTVATLEERPFVIVEPA--DPISGTCIRDSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGV--WNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVS--PSAFLEPYSPA--VWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATGK------------RPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKNIRSNYPDMHS----YMVRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHND 831

The following BLAST results are available for this feature:

BLAST of TCONS_00018412 vs. Swiss-Prot (Human)

BLAST of TCONS_00018412 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NMDE4	1.563e-36	27.45	Glutamate receptor ionotropic, NMDA 2D OS=Homo sap...	[more]

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TCONS_00018412 (transcript) - C. hemisphaerica