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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018562 ID=TCONS_00018562|Name=TCONS_00018562|organism=Clytia hemisphaerica|type=transcript|length=1904bp
CTTCAGAAGAGCAAGTGAGTTAGAGTAATGTTTTGCAGTATGTTGTCACG
TTCAAGATGTCAACTGAATGCTTCTACACCAAATTTTTGTCAACCACCTT
GGTCACCGGTTGTCCCCTACAAAAATCAACTGACGTTGCCATCCAAAGAA
CGACTAAGTGCTAGTACGCAAGACTTACGAAATGGTAACATGTTAAAATA
CTATGATGGATATCCTCAAGAGAACCACAAGAATCATAATtacattgaaa
caaatgaaTCACTTATTAAAGAAGAAGATTTGATTCGGATCAACGTCTGT
GGAATGATTTATGAGACTTTGCGAAGCACCCTCCAAAGATTCCCAGATAC
GTTACTTGGTGACAAAAGTCGATTGGATTTGTACTATGTTAAATCAAgag
atttttattattttgataagAACAGACAAGCTTTTGAAGCCATTCTGTAT
TATTACCAAACAGGTGGCATTTTGATTCGGCCGCCCAACATTCCCATGCC
GTTGTTCGCAGAGGAGGTGGCCTTCTTTGACCTTGGTGAAAGTGTCTTTA
TGCAGTTACAAAAAGAGGAAGGTTACATATCTGACCAAGAACGCGTCTTA
CCGACGAACGAGCTTCAACGGAAAGTGTGGGAGTTGTTCGAATTCCCTGA
TTCTAGTCAAGCAGCACGCATCCTTGCAACATGGTCCGTTCTCGTTATCA
TCTTATCCATCACTGTTTTTTGTTTGGAAACTTTGCCACAATACTCAGTG
AACAACAACAAGCCTCTGACGACTGCTGCACCTTCAGGGAATGTTACAAA
CGGTACGCTCTCTGCAACTCCGAGTAAAAGTGAAGGTGAAATGTACCGTC
AACCATGGTTTTCCTTTGAATTAGGCTGCATCATTTGGTTTTCCTTTGAA
TATCTGGTGCGCCTTCTCTCATCCCCATCCAAATGGCAATTTGCCAAATC
CTTTCTTAACACCATCGATTTATTGGCCATCCTTCCTTATTTCATCACCC
TATCCATCAATTCGGAGAACACCACACCGCTATCCGTTCTTCGGGTGGTC
CGGTTGGTTCGTGTCTTCCGTATCTTCAAATTGTCCAGACATTCACTTGG
CTTGCGTATCTTGGGACACACATTACGAGCGAGTATCAGTGAATTGGGCA
TGTTGATATTCTTTCTGTGTCTTGGTGTCATTCTGTTTTCCAGTGCCATA
TTCTATGCGGAACAAGGAATGAATGATCAATTCCAAAGCATTCCCGATGC
GTTTTGGTACAGTCTAGTCACCATGACAACCGTTGGATACGGAGACAAAG
TTCCCAAAACATTACCTGGGAAATTTGTTGGAAGTCTTTGTGCGATCGTT
GGCGTGTTGACAATTGCATTGCCAGTACCGGTTATTGTGTccaattttga
gtttttttacaAGCGTGATCGGATGACGTTCGAAAGGAGCAAGTATAACA
CACCGTCGGAGAATCAATCCAAACGACAATCACCTGATCAATCGCCTCAA
AGCAATCATAAAGAGAACAACATCAATCATAATCACAACGAAGATCCTCT
CTTGACAACTACTGTTATGTAAACTTGTTATCACGAGAGAGCTCCCGCTA
CATGGTGATTCATGAGTTTTTGTGGCTGCGTAAATAAGAGGAGGTAAACC
ATATGGTGATTGGGTTACCTAAATCCGTTCGGTATAGAAAGAACACTTTC
ACTGAAATAGAGatcattaaaattgatgatttaGACAGATGCTGATCGCC
AAGTTTTAActtttaattgtttttcttaATGAAAGTCAATGCTGTTAGGT
CTTAGCGAATCTTCACTGCAAGTGGTGTCTTTCGATTCCTTGTAATAACA
GGAGAAAAGTCTTTAACAAGCAAGTGTTTGAAAACTTAATGTTGTCATCT
TCNN Run BLAST on NCBI transcript from alignment at sc0000301:340953..350921+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018562 ID=TCONS_00018562|Name=TCONS_00018562|organism=Clytia hemisphaerica|type=transcript|length=9969bp|location=Sequence derived from alignment at sc0000301:340953..350921+ (Clytia hemisphaerica)
CTTCAGAAGAGCAAGTGAGTTAGAGTAATGTTTTGCAGTATGTTGTCACG
TTCAAGATGTCAACTGAATGCTTCTACACCAAATTTTTGTGAGGATATTT
CTTATTTATACTTATTGTACAATTTTAAACTAAATATATGTAAAGTTCTC
TCTAAAGAAGGTCAGAgggataatatttttttactttttacttgaCTAAA
CACTTTTACCCTAGTAAGTGGCGACACAAGGTTTCAGATTAgaaaaaatg
ccaataaaatgTCAGCACCCTCTCTTTTCATTCAAAAGTTTAAGCTAGCT
AGGTtagggagcggtcataaagtatctactagaggggggtggaggatatt
ttgaaaaatccaaaaaaaatttcgcacaCCCCCCCCCCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtgaaaatattaaactgtaagagcagtatggttgaaagtaacgc
ccggaatctttgagtcaagaaacttggaatttgctttttgtaatttgaaa
tgttaagTAGCAGATGCtaaggaggcacaaccatggtttgcgccgacggg
cgaaaatttcaatatttttcagcaccattttagctaaaagacactttgtt
ttgacaaatttcttttaagaagtactttttcaaaccactctgatgagctg
cgagagccactaatctacttccctcacttagctcaatgttacaaaccaga
tgatgcccaaataatggCAATATGAAATGTACATATATCCAATAAGATAA
ATTATGAGTTGTCGGCCGTAAGGCCGAAAAATTTTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggtagcgaaaacttagg
ggaaactgttaggtttttgagacttgcctTAAGTCACTCGAGGTTTTGAG
ATGGAGGGAGATATGTTCATCTTATTTGGTCATTGGTAGGAACTCTCTAC
TCATTTCTTCACTTAGTGTGAAATATATTGGACATAAATTCGCCCTCTTC
GCAGATTATTCttcaaagtcttttcaaaaaatggcaGAATGAAGAGAAGA
AAGATAGATAAACAAAAGCCCTATAGATCGTAGAATCCTAAATGTGGCAA
AATCTGTGTTTTTCCCCTTTTGCGTTTTTCTTTCGAAGTTTTTTCTATTT
GAATGATGTTGGTCCTGTAGACGGTTTGGTAGGCTAGATCGTGAAGGCTT
TTCTCAGTTTTCTGTGGAGAGGAGAAAATGCATCACCATCGATCTCTCAA
CAACCTGATGATGCAACCTAAACCCGGTAATAACCTTCTTTTCAAACCAA
TTCTCAAAATCGTCTTTCTTATAATTGGCTTTGCCTTACACTCTTCTTTT
TGAATCTCCCAATCACGATTCAGCAATTCTTTTCTGATCTAATTCAGACT
CCATACCACAAATAAAAGAAgagcaatatattttttaacatATTAACCCC
TGTCTCCCTGGTCCGATGAGAATAATTTGCCACCAGTATGAAATCAATGA
GCAAACACGTGCAAAAACCAATTGGGGATGTTTTCTCTTCACCATTAGgg
tgtaatttttaaaaagtgtagCTTTTCAATCATGAAATCTCGAGTTGCTT
TTTCACCGCAACGATTATTTGGGCGACTTTATTTTTCCAGCGGGTACAGA
TGTCGGTCAGTGCCTTTGATACAGGGGTGGATATGTaattaaaactgttt
ttattgATATAATTATATAAAGTTAATAATAGCGATGGCTTTTTTCAACG
TCGTGAGTCATGTTTTGATGTcgaaaagaagagagaaaaaaagcGACGAA
GAGACGAATGGTAAGAGAAGTTCAACACTTGTCCGAGTTCAATATTTTAC
GGTATTGCCCGAAGAAACAGTttatgactttttaaagtagattcttttgt
gtttaatAACACTCAATAATAACACCCATAAATATATCTATTTCGTTTAT
TCTAACACCATTGGTATTCCATGAGCCCGGAACTTTTTATTGGACTGACC
TTCGATGACCTTCTCTAAAATATAAGTTTAATATTCGTTTAATTTTTTAC
AGTTTACACGGGTAGCCAACTCGGTTATAATGCGGACCAAATGGGAACAT
TGCAAGGTTggtgtttcagaaaaaaactcttAATGACAAGGTTGCCAAGG
TTACCCCTCGAATAATCATCAGTTCCGAagtttttaaaagttcaacTCGT
TCaacaaagtaaattttttgagtGATCGCAAAGATGAATAATTATGTAAT
GCAATAAAACCTATAAAAGGcagacactcaattagcggaccctctgattg
gTGGACCCTCGGACAAATTCTTTTGCACGAAATTGCAAAAACCCCTATTT
TCGCTCTCCAATTAGCGAGAATCGAATATCAAACTGGTCAcagatttttt
ctttgaagCACGTATTAGTTTTATTATCCAAAttagttttaaaagtttta
agtttTCTCTTGACCCATTCGACGAATTTAGCCGGGCCAACGAAATCATA
AACGCTTGCACTTCAACCCCCAGCCATCAGCTAGATTCAACCTTTTCCCA
GTAGCTCGAGCTCTGGTTCCGGTATTCTGTTCGAATGATTgctacaatat
ttttttttcaactatGTTATCTGGTTCATGTTTGCAAACTAGTGATTTCC
CCTATGAACGGAGTCCAAATCTGACGATCCCTTTCTACCTTTCTTGTAAG
TACGGTACCCTCTGACTTTCAAGTTAATCTTGTTCAACTTCTATTTTTGT
GTTATATTATATTTCTATAGACATTCTTTAAATCGTGAAAATTAAATTGT
TGCGTCTCAAtaacctttctcttgttcttctatgTCCTAGTGTCCTGCAC
AAGTTCTAAAGACTCCCttacaccctgggatggcctaatttcaaaattgg
agctcttagatgaaaaagttctaaaatttgGACGCTTCTAGTTAGCGGAC
GTTTCTCCGGTGGTatccgctaattagaggctcCATCGGTGTCAAGTCAA
TGTAGAAGAGGGGTTAGAAAACGATTTTTCTAATCTTCTggagaaaaaaa
gacaaatgaatCAATTTTACTTGAACAGGAAAAAAGAGATGTgagagaaa
aaagttttttatttgagggTTGATCGTGGTTGTGGTCATCTTTCGACCGC
ATGTTTTACGGTTTTTTGTGTTCGAAGGGTTTTAAAAACGTTGACAGAAA
ATGAGATAAAAAGAGCGaagtagaaaaaagaaaaaagaatggaGAAAAGG
AATCATCAAGCAGAATGGAAATTGGAAAATATGTGGAAAGTTTTTCTGTT
aagaaaatagataaaaattgTTGTTGATGTTagtttataaaacaaaaaaa
atcatgaagATTTTCCTTTCGAACTAATTAGAATGTCATTCTTTAGAAAC
GCCTTTCGAGAAGTATCTTTGATTTTCACAGCTCAAAGTTTTCTTTTGAC
TTTTAGGAAGTCACAGTCTTTTTGTCTTCTGTTTTTGCAGTTAACTTCTT
TTTTGGTGATATTTCTACTGTATGATCTCTAATATCTTGGGGAGCAACAT
GCTGCTATTTAAAATGATTACTATCCCTTCCTAAACAAAATAGTTATTGA
TTGGAAACACATCAAATCGAAATCCAATTTCAGTATATAGATTCCTAGCT
GGTAAACATTTCAAACGTTGTATATGGGCgtattttgttgttattttaTG
GGCGTATGGGGGTGGGGTAaggggatgtgccgctggtccAGGTAACTTAG
GAAGTgttcataaagtatctactagaagggggtggaggatttttccaaaa
atcggaaaaaaaattcgcACCCCTATGTTCAAAGATTTTTCGAACCTCCC
CCTTAACCAAGCCAAAAacttttcccccccccccccttaaccaagccaaa
aacttttcccccccccccccttaaccaagccaaaaacttttccccccccc
ccccttaaccAAGCCAATAACTTTTCTCACCCCCTCCCCTccctaagaaa
attttttaataaataccCCCCTCTCGTGCAATCCTTGCCTTGTTCATAAG
TTAGATGAAAGTTGCTGAAATGTGAAATTGGATTTCAAACATCGCTTCCG
GAACTTTACAATCTCATTTATATCCTTTAATTTTTGTCTGttctttttgg
gaaattttatCGTAGCGAGTGTTATAACTGAGGCGCAACCGTTTTGCGcc
gacaaagaaaattttaaaattttaacccTCTCATTTAGCTAGGTGACCCT
AGGTGCTTCCTGTTAGTGCGAGAGTTATTGAAAACAAGACTAAGATTTCA
AGCTATATTActtaaaaattgagatttttgcaGCATGCAAAGACCATATA
TGCAAAGACAAATAATAGATTATGATTGGtgtaaagttttaaagaaaagt
tttcaaaaaaggcTCTGATAAATGGTTGAAAAACACTTGATTTTTGAATC
AACCTGGTGGGATGTCAAAacaatttccccccccccccctaaagaTAAGA
TGgcaaaaaattatctttcacCGTACCTTTTTTTTCTGGCACTTTACTAA
TGATTTTTTTAGCACGGGTGAAAAGAAATCAGCAACGTGTATTTGACAGA
CCTCCCTGTTGAACTGGTTGTGTTTAATCATTCTTTTCTGTGATTTTCCC
TTTCAACCTGGAAAAGGGTGATGATATGGCTCTAAACGAACCTTTTCAAT
ATTTGGCCACTTTCAGGAAATTCTAATTCAAAAGCTGATATCGatagcaa
aaataagaaaaaagcgaaaatgaaaagttgaaagaaaaataaaatcgaaC
TGGAAGAGAAATATAGAATTTcatctttttgtactttttttttGTACTTT
CTTTTCTTCTGAAGGGAATATATTTCCCTATATATATCGTACTTTTCTCT
AGCAAtgggatttgaaaataatataacttttttgggacttttcttttttc
tttttccaatttCAGCCGTTTTTTCTTTCGATTTACACCTTCCATCGAAt
tacttttttcttgaaaaccGTTTGTTTGGGGAAGAAATTGGTTAATGAAA
AAAGCCCCCACTCGACAAAGAAACGTGAGGAAAAAACACTTTAATAGGAT
TGATATAGCGAAAAGaagttttaaataaataaacataaatTTGATAACAA
GAAAGCCTGTTTCTAATAAGCAGATGGCAGcattaaaaacaaacatttta
tcCAACTTTGGATACTGTTTCTACAATCGCCTTTCCTTACATCTTTATGT
GCCTGCTATATCTTATGTAAAGACGTGAGGAAAGTTTGAGAGAGAAAATG
AACGAGAGCTTGTTGAAAGGTGAATGAAGGGTAATCCCTCTTTTGGCCTT
CTTTCTTATTTACTCCTTCTCCTAGTTGAAACTTGACTCGAATTGTTATC
AAATCAAACATGGAAGGATCATTTCATAGTTTCACTTCATTAAATCatct
tttttcattcttttatttcgtttttcttcctttttaaaaatattgttcct
cgaacaaaaacttttcatttacGATTTGATGAAGGACAAAATAAGTTTAT
TCACCCTCTACCCGAACaagaacaaatttctagttGACTGTGTTTTCAAC
CTGATGTTCTTTTCACTTAACACCCTATGCTAGATATTTCCCCATTATGC
AAACTATCCCTATTTATTCATTCTAAGTACTAATGAACTTTGTCTTTTTT
CGAGCcttgatgttttttttcctCTTCAATTTTGAGATGATTTTTTGCGT
TCAAATTAGAAGGAAGatatttgagcaaattttattattttaacacGGGA
AATTAGAATAGAATGGTTGCTGACTTTTAAGGTGAAGATTAGATGACCTT
TTACAAGTTTGATCAGGTTTATCAAATATTTAGGTGCTTTGTAAGGGTCA
AAGGTTGGCAAATCTGTCGATTATGTTTGGATTCAAAAGAATTCGTGTGT
CCTTCTTTAAAATCTATGTTGAGAGAAAAGACTTCACGACCTTGAGCTCA
AACCATATTGGCCTGTTCTTAGACGATTTTAAGCATTCAGTTTGAGTAGT
TGACACATCGTACATTATTTCGGTTCCTTTCTACCTTTCTTGCGTTTGTT
TGATCTACATTCGAAATAACATTCtaagttttgtatttttcttcatCGTT
CAGGTCAACCACCTTGGTCACCGGTTGTCCCCTACAAAAATCAACTGACG
TTGCCATCCAAAGAACGACTAAGTGCTAGTACGCAAGACTTACGAAATGG
TAACATGTTAAAATACTATGATGGATATCCTCAAGAGAACCACAAGAATC
ATAATtacattgaaacaaatgaaTCACTTATTAAAGAAGAAGATTTGATT
CGGATCAACGTCTGTGGAATGATTTATGAGACTTTGCGAAGCACCCTCCA
AAGATTCCCAGATACGTTACTTGGTGACAAAAGTCGATTGGATTTGTACT
ATGTTAAATCAAgagatttttattattttgataagAACAGACAAGCTTTT
GAAGCCATTCTGTATTATTACCAAACAGGTGGCATTTTGATTCGGCCGCC
CAACATTCCCATGCCGTTGTTCGCAGAGGAGGTGGCCTTCTTTGACCTTG
GTGAAAGTGTCTTTATGCAGTTACAAAAAGAGGAAGGTTACATATCTGAC
CAAGAACGCGTCTTACCGACGAACGAGCTTCAACGGAAAGTGTGGGAGTT
GTTCGAATTCCCTGATTCTAGTCAAGCAGCACGCATCCTTGCAACATGGT
CCGTTCTCGTTATCATCTTATCCATCACTGTTTTTTGTTTGGAAACTTTG
CCACAATACTCAGTGAACAACAACAAGCCTCTGACGACTGCTGCACCTTC
AGGGAATGTTACAAACGGTACGCTCTCTGCAACTCCGAGTAAAAGTGAAG
GTGAAATGTACCGTCAACCATGGTTTTCCTTTGAATTAGGCTGCATCATT
TGGTTTTCCTTTGAATATCTGGTGCGCCTTCTCTCATCCCCATCCAAATG
GCAATTTGCCAAATCCTTTCTTAACACCATCGATTTATTGGCCATCCTTC
CTTATTTCATCACCCTATCCATCAATTCGGAGAACACCACACCGCTATCC
GTTCTTCGGGTGGTCCGGTTGGTTCGTGTCTTCCGTATCTTCAAATTGTC
CAGACATTCACTTGGCTTGCGTATCTTGGGACACACATTACGAGCGAGTA
TCAGTGAATTGGGCATGTTGATATTCTTTCTGTGTCTTGGTGTCATTCTG
TTTTCCAGTGCCATATTCTATGCGGAACAAGGAATGAATGATCAATTCCA
AAGCATTCCCGATGCGTTTTGGTACAGTCTAGTCACCATGACAACCGTTG
GATACGGAGACAAAGTTCCCAAAACATTACCTGGGAAATTTGTTGGAAGT
CTTTGTGCGATCGTTGGCGTGTTGACAATTGCATTGCCAGTACCGGTTAT
TGTGTccaattttgagtttttttacaAGCGTGATCGGATGACGTTCGAAA
GGAGCAAGTATAACACACCGTCGGAGAATCAATCCAAACGACAATCACCT
GATCAATCGCCTCAAAGCAATCATAAAGAGAACAACATCAATCATAATCA
CAACGAAGATCCTCTCTTGACAACTACTGTTATGTAAACTTGTTATCACG
AGAGAGCTCCCGCTACATGGTGATTCATGAGTTTTTGTGGCTGCGTAAAT
AAGAGGAGGTAAACCATATGGTGATTGGGTTACCTAAATCCGTTCGGTAT
AGAAAGAACACTTTCACTGAAATAGAGatcattaaaattgatgatttaGA
CAGATGCTGATCGCCAAGTTTTAActtttaattgtttttcttaATGAAAG
TCAATGCTGTTAGGTCTTAGCGAATCTTCACTGCAAGTGGTGTCTTTCGA
TTCCTTGTAATAACAGGAGAAAAGTCTTTAACAAGCAAGTGTTTGAAAAC
TTAATGTTGTCATCTTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018562-exon-sc0000301-1491911889:340953..341040 | TCONS_00018562-exon-sc0000301-1491911889:340953..341040 | Clytia hemisphaerica | exon |
| TCONS_00018562-exon-sc0000301-1510915933:340953..341040 | TCONS_00018562-exon-sc0000301-1510915933:340953..341040 | Clytia hemisphaerica | exon |
| TCONS_00018562-exon-sc0000301-1575043694:340953..341040 | TCONS_00018562-exon-sc0000301-1575043694:340953..341040 | Clytia hemisphaerica | exon |
| TCONS_00018562-exon-sc0000301-1491911889:349106..350921 | TCONS_00018562-exon-sc0000301-1491911889:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018562-exon-sc0000301-1510915933:349106..350921 | TCONS_00018562-exon-sc0000301-1510915933:349106..350921 | Clytia hemisphaerica | exon |
| TCONS_00018562-exon-sc0000301-1575043694:349106..350921 | TCONS_00018562-exon-sc0000301-1575043694:349106..350921 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:340953..350921 + |
Blast
BLAST of TCONS_00018562 vs. Swiss-Prot (Human)
Match: KCNA2 (Potassium voltage-gated channel subfamily A member 2 OS=Homo sapiens GN=KCNA2 PE=1 SV=2) HSP 1 Score: 398.282 bits (1022), Expect = 5.001e-131 Identity = 219/438 (50.00%), Postives = 293/438 (66.89%), Query Frame = 1
Query: 208 GYPQENHKNHNYIETNESLIKEEDLIRINVCGMIYETLRSTLQRFPDTLLGDKSRLDLYYVKSRDFYYFDKNRQAFEAILYYYQTGGILIRPPNIPMPLFAEEVAFFDLGESVFMQLQKEEGYISDQERVLPTNELQRKVWELFEFPDSSQAARILATWSVLVIILSITVFCLETLPQYSVNNNKPLTTAAPSGNVTNGTLSATPSKSEGEMYRQPWFSFELGCIIWFSFEYLVRLLSSPSKWQFAKSFLNTIDLLAILPYFITLSI----------NSENTTPXXXXXXXXXXXXFRIFKLSRHSLGLRILGHTLRASISELGMLIFFLCLGVILFSSAIFYAEQGMND-QFQSIPDAFWYSLVTMTTVGYGDKVPKTLPGKFVGSLCAIVGVLTIALPVPVIVSNFEFFYKRDRMTFERSKYNTPSENQSKRQSPD 1488
G+PQ+ + E E ++ IN+ G+ +ET TL +FP+TLLGD + Y+ R+ Y+FD+NR +F+AILYYYQ+GG L RP N+P+ +F+EE+ F++LGE +++EGYI ++ER LP NE QR+VW LFE+P+SS ARI+A SV+VI++SI FCLETLP + N + +N T+ S S + P+F E CIIWFSFE+LVR + PSK F + +N ID++AI+PYFITL + L++LRV+RLVRVFRIFKLSRHS GL+ILG TL+AS+ ELG+LIFFL +GVILFSSA+++AE + QF SIPDAFW+++V+MTTVGYGD VP T+ GK VGSLCAI GVLTIALPVPVIVSNF +FY R+ E+++Y + SPD
Sbjct: 17 GHPQDTYDPEADHECCERVV-------INISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTS----FTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPD 443
The following BLAST results are available for this feature:
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