TCONS_00018793 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018793
Unique NameTCONS_00018793
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2031

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018793 ID=TCONS_00018793|Name=TCONS_00018793|organism=Clytia hemisphaerica|type=transcript|length=2031bp
CTTTGACTTTGGTAACACACGAAGTATTTTTTTATGTTCTGAAGAAAATG
GCTAACAAAAAAGGACTGCTGATCGCGACCCTTATCATACTCATCATTGT
CGTTGCCGTAACTTTAGCTCTTGTCTTCACATTGAAGAAAGATGTTGACA
ACAAGAGCTTACCAACAAGTTCCTTTAAAGTCGTACAAACAAAGCAAGGT
GGAATCGAAGGGAAAATCATCAAAGTAACCAGAGATGACGGCGAAACAGA
GAATGTGTATCGATTTCGAAATGTCCCGTATGCTGAACCACCTATCAGAG
GTTTAAGATGGAAAGCTCCTAAACCAATACAGAAACAAAGtaaaacattg
aaatatagTGATCAACAGATCTGGTGCGCTCAGATTCAACCCCCCAATAA
TATCCTCAATATAACTGAAGATTGTCTTATATTGACTATCAGGCAACCGG
AATCTGCAACTCCTGATCAACCTCTACCAGTATTGTTCTGGATTCATGGT
GGAGCATTAGCTAGAGGATCAAGCGATTGGTACTACCCTGATGAACAAAC
TTCAGCATCTCTCGGTATGGTTACTGTATCCATAAACTATCGATTAGGAA
TCTTCGGTTTTTTATCTATCAAAGAGTTATGGTCAACCAATGATGGTGAA
GAAGGACAATATGGCAATTTTGGGATCCTGGATATGATCGAAGCATTGAA
ATGGGTTAAAATGAATATCCAATTTTTTGGTGGTGATCCTAACAAAGTGA
CAATCCTTGGTGAATCTGGCGGTGGTGCTGCAGTGTTTTCATTAATAACA
TCACCTCTAACGGATGGTCTTTTTAATAAAGCTATTGCAGCAAGTGGTTA
TCCAGTATCTTTAGAAACGACTTATCAAAGAGCTGATTCGAGATATGGTT
CCACTTTCAAAGAAGATTTAAGATGCTCAAACGGGAATGATGGAGATGTA
ATGACCTGTCTTCGTGATAAAACAATGACCAGTATTCTTGACAAGGACCC
TTCGATGATGAGACCTATAAACGGATCCTCTTGGGTATTCCCTTTCAATC
AAAGACTCAACGATTACCCCATTCGTGTCATTGATGGTGAAATCATCAAT
ACTCCTTTGGGTTCACCAGGGAAATATCTCCAAAAAGGCTTGAAAGTTCT
TATAGGAAATACTGCTGCAGAGTTACCCCCACAAAATGCAACTAAAACAA
TCCAAGGACTTGAGGAGTTTCTCAAACCAAGGATTCTAAGTTTCACCGAT
ATGGATACTTATGAGGAATTAATGAATCTGTATCGCCAGAAACGTCCTGA
GGATAAAACATCTCCAGCTGTTATAACACCACAGTTGGTTTACCTCCAGA
TGGCTGCAGATGTTGTTTTAAGTTGCCAAACGAACGATATTGTCCATAAT
ATATCAATAGAATCTAACTTAACGGTGTACCGGTATCTCCATAGCCAGCC
TTTATCGGAAAACTGGAATAACGATAAGGAGTATGAATCAACGGCGTACC
ATGGAATTGATACCGATGTTTTATTCGGGATCAAGTATTATTACCCCGAT
TTTAATATTACGGACAGTGACCAGAAACTGATTTTGAACTTCCGTCAAAt
tgttaaagattttgtttataGTGCGCCTGAATTTGACACCACCTATACAA
ATAAAACCATTGAGTTTTGGGATGATCGAATCTTGACTTGGGATAAACCA
TACCATGAGAAAGAATGTCAAGTTTTAAGAGATAATGGATTTTTAAAACG
AGCTTGGGGACAACTTggttgatttgaaatttatgaATCTAAAGATATGG
AAACACGAAGCGACTATTTAACCAAAACTCGAATAAATGAACCTATATGA
CGAACAGTGTCCCGAAAAAGCggacaatttttttataaagtaaaatcctc
ataagCTATAGAAATCGTCATTTAATTTTTAAACGTTTAATAAATTTTCA
CAAATAGTAATCAGCATTCTAATATTcatgaaatttcaaaagtttgaatA
GTGAGCTCGAATTTTCCTCAAAAAGTTCCTA
Run BLAST on NCBI

protein sequence of TCONS_00018793-protein

>TCONS_00018793-protein ID=TCONS_00018793-protein|Name=TCONS_00018793-protein|organism=Clytia hemisphaerica|type=polypeptide|length=589bp
LTLVTHEVFFYVLKKMANKKGLLIATLIILIIVVAVTLALVFTLKKDVDN
KSLPTSSFKVVQTKQGGIEGKIIKVTRDDGETENVYRFRNVPYAEPPIRG
LRWKAPKPIQKQSKTLKYSDQQIWCAQIQPPNNILNITEDCLILTIRQPE
SATPDQPLPVLFWIHGGALARGSSDWYYPDEQTSASLGMVTVSINYRLGI
FGFLSIKELWSTNDGEEGQYGNFGILDMIEALKWVKMNIQFFGGDPNKVT
ILGESGGGAAVFSLITSPLTDGLFNKAIAASGYPVSLETTYQRADSRYGS
TFKEDLRCSNGNDGDVMTCLRDKTMTSILDKDPSMMRPINGSSWVFPFNQ
RLNDYPIRVIDGEIINTPLGSPGKYLQKGLKVLIGNTAAELPPQNATKTI
QGLEEFLKPRILSFTDMDTYEELMNLYRQKRPEDKTSPAVITPQLVYLQM
AADVVLSCQTNDIVHNISIESNLTVYRYLHSQPLSENWNNDKEYESTAYH
GIDTDVLFGIKYYYPDFNITDSDQKLILNFRQIVKDFVYSAPEFDTTYTN
KTIEFWDDRILTWDKPYHEKECQVLRDNGFLKRAWGQLG
Run BLAST on NCBI

transcript from alignment at sc0000306:196249..199925-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018793 ID=TCONS_00018793|Name=TCONS_00018793|organism=Clytia hemisphaerica|type=transcript|length=3677bp|location=Sequence derived from alignment at sc0000306:196249..199925- (Clytia hemisphaerica)
CTTTGACTTTGGTAACACACGAAGTATTTTTTTATGTTCTGAAGAAAATG GCTAACAAAAAAGGTAAGTTGGGTAAAATAACCGGCTTTGAAAGAAATTT GGATATTTTACGGTTACTAATTATGAAGGTTCTTATATGATAGTCCATTT CTTTCTTAAGATGTTACTCACCATAGTTTCTACCCCCCTACATTTANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNGGGGGGGGGGGTCTTCTTAGATAAGGGGATCTTCCTT GAATTATGCGAAATTTCAACTTTTTCATTTATACTAATTTTCTAAGGGGG GTGTGAAATTTTAAATGAATTTCCTAAGAGGGGATTAGCACTTAAGGGGG TCCTCTTACCTAAGGGGGAGTCTTGAACCCTCTAGAAACTTTGCAGACCC CGTGAGATTTTTTCACTTAGTCGGAATAAAAATAAAGAAATCGACTGAAA CTAGATGGTGATCGATCTTTCCATATTTTTTTTACGGCAAGGGATTTAAA TACCATTGTTTTCAAGTCAGAAAAATAGCACAATATTTTGTAATGAGGAT TTGTTTATTTGATTATTTTCAGCGAGGACAAAAATTGAAGAATAATTTTC CACGGGGACGATATTTTTGCCCATTTTTCTAGTGGGAGGTGGTCTCAATC ACAGATTTCTGTAAAGCCCGAAGGGCTAAATGTCGTGCTTTAAGCCATCG CAGGCAAAAAAAGAGAAAGTCGCAAAAATATTGTTGCTAGTATTTTCGAA AACCCACGAATCTTTTGATTGGTCAAGCGCTGAAACCCTACTGTAATGTC ACGTGGCCTAGGCAGGAGTTCCTACCTAATACAGTACACTTTTCAGCCAA AACACGAAATCTAGCCCTTCGGGCTTTATAAATCTATGGTCTCATCGGGT CTCTGAGAAGGGGGTGTTTAACTGATAATGATGTCTTTAATATTTTTTTC AGTTGAATAGTAAGGTAACGAAATTAAGGTACAAATAAAAGTTTACTGTT GACTCTTGCTAATTCGAACTCGAAGGGGGGATCTTATTTGTTCGAATAAC AGAGAGATTTGTATTAAAGACAGTAATTTAACAGGGTTTTGCCCTGACGG GAGCTGAGAATAAGTTCGAATAATAGAAGTGTTAATACGCGAGAGTTGAC TGTCCCGCCTAGACTTCTAAACTAGTTTGATTCAGTCACTAGGATAAATC TGATGGTAAGTTGTGACTGAATAACAGTATTCAAAGGCAAAATTAAAACC CACAAATTTAAAATGTCTTTAAAGCGCCGAAAACGCTATAATATTGTCTA TGCCATGTGTCTTAGCCTTGTGAATACGGGCTTACTCTCGCGTACCTAAT AGCCGTCCCCCCGCTAATAAATTTTCCACCCAGGACATTTTTATTACAAC GCCCCCACCCCCGCTTATCAAGTTTTGAGATTCTTTCCAACCCCCCCCGG CTATTAGGTACCCGAAAGTAGTTAACTAGGTTATTGACTGTTTATATTTT GACTTATAGGACTGCTGATCGCGACCCTTATCATACTCATCATTGTCGTT GCCGTAACTTTAGCTCTTGTCTTCACATTGAAGAAAGATGTTGACAACAA GAGCTTACCAACAAGTTCCTTTAAAGTCGTACAAACAAAGCAAGGTGGAA TCGAAGGGAAAATCATCAAAGTAACCAGAGATGACGGCGAAACAGAGAAT GTGTATCGATTTCGAAATGTCCCGTATGCTGAACCACCTATCAGAGGTTT AAGATGGAAAGCTCCTAAACCAATACAGAAACAAAGTAAAACATTGAAAT ATAGTGATCAACAGATCTGGTGCGCTCAGATTCAACCCCCCAATAATATC CTCAATATAACTGAAGATTGTCTTATATTGACTATCAGGCAACCGGAATC TGCAACTCCTGATCAACCTCTACCAGTATTGTTCTGGATTCATGGTGGAG CATTAGCTAGAGGATCAAGCGATTGGTACTACCCTGATGAACAAACTTCA GCATCTCTCGGTATGGTTACTGTATCCATAAACTATCGATTAGGAATCTT CGGTTTTTTATCTATCAAAGAGTTATGGTCAACCAATGATGGTGAAGAAG GACAATATGGCAATTTTGGGATCCTGGATATGATCGAAGCATTGAAATGG GTTAAAATGAATATCCAATTTTTTGGTGGTGATCCTAACAAAGTGACAAT CCTTGGTGAATCTGGCGGTGGTGCTGCAGTGTTTTCATTAATAACATCAC CTCTAACGGATGGTCTTTTTAATAAAGCTATTGCAGCAAGTGGTTATCCA GTATCTTTAGAAACGACTTATCAAAGAGCTGATTCGAGATATGGTTCCAC TTTCAAAGAAGATTTAAGATGCTCAAACGGGAATGATGGAGATGTAATGA CCTGTCTTCGTGATAAAACAATGACCAGTATTCTTGACAAGGACCCTTCG ATGATGAGACCTATAAACGGATCCTCTTGGGTATTCCCTTTCAATCAAAG ACTCAACGATTACCCCATTCGTGTCATTGATGGTGAAATCATCAATACTC CTTTGGGTTCACCAGGGAAATATCTCCAAAAAGGCTTGAAAGTTCTTATA GGAAATACTGCTGCAGAGTTACCCCCACAAAATGCAACTAAAACAATCCA AGGACTTGAGGAGTTTCTCAAACCAAGGATTCTAAGTTTCACCGATATGG ATACTTATGAGGAATTAATGAATCTGTATCGCCAGAAACGTCCTGAGGAT AAAACATCTCCAGCTGTTATAACACCACAGTTGGTTTACCTCCAGATGGC TGCAGATGTTGTTTTAAGTTGCCAAACGAACGATATTGTCCATAATATAT CAATAGAATCTAACTTAACGGTGTACCGGTATCTCCATAGCCAGCCTTTA TCGGAAAACTGGAATAACGATAAGGAGTATGAATCAACGGCGTACCATGG AATTGATACCGATGTTTTATTCGGGATCAAGTATTATTACCCCGATTTTA ATATTACGGACAGTGACCAGAAACTGATTTTGAACTTCCGTCAAATTGTT AAAGATTTTGTTTATAGTGCGCCTGAATTTGACACCACCTATACAAATAA AACCATTGAGTTTTGGGATGATCGAATCTTGACTTGGGATAAACCATACC ATGAGAAAGAATGTCAAGTTTTAAGAGATAATGGATTTTTAAAACGAGCT TGGGGACAACTTGGTTGATTTGAAATTTATGAATCTAAAGATATGGAAAC ACGAAGCGACTATTTAACCAAAACTCGAATAAATGAACCTATATGACGAA CAGTGTCCCGAAAAAGCGGACAATTTTTTTATAAAGTAAAATCCTCATAA GCTATAGAAATCGTCATTTAATTTTTAAACGTTTAATAAATTTTCACAAA TAGTAATCAGCATTCTAATATTCATGAAATTTCAAAAGTTTGAATAGTGA GCTCGAATTTTCCTCAAAAAGTTCCTA

Coding sequence (CDS) from alignment at sc0000306:196249..199925-

>TCONS_00018793 ID=TCONS_00018793|Name=TCONS_00018793|organism=Clytia hemisphaerica|type=CDS|length=3540bp|location=Sequence derived from alignment at sc0000306:196249..199925- (Clytia hemisphaerica)
GACTGCTGATCGCGACCCTTATCATACTCATCATTGTCGTTGCCGTAACT
TTAGCTCTTGTCTTCACATTGAAGAAAGATGTTGACAACAAGAGCTTACC
AACAAGTTCCTTTAAAGTCGTACAAACAAAGCAAGGTGGAATCGAAGGGA
AAATCATCAAAGTAACCAGAGATGACGGCGAAACAGAGAATGTGTATCGA
TTTCGAAATGTCCCGTATGCTGAACCACCTATCAGAGGTTTAAGATGGAA
AGCTCCTAAACCAATACAGAAACAAAGTAAAACATTGAAATATAGTGATC
AACAGATCTGGTGCGCTCAGATTCAACCCCCCAATAATATCCTCAATATA
ACTGAAGATTGTCTTATATTGACTATCAGGCAACCGGAATCTGCAACTCC
TGATCAACCTCTACCAGTATTGTTCTGGATTCATGGTGGAGCATTAGCTA
GAGGATCAAGCGATTGGTACTACCCTGATGAACAAACTTCAGCATCTCTC
GGTATGGTTACTGTATCCATAAACTATCGATTAGGAATCTTCGGTTTTTT
ATCTATCAAAGAGTTATGGTCAACCAATGATGGTGAAGAAGGACAATATG
GCAATTTTGGGATCCTGGATATGATCGAAGCATTGAAATGGGTTAAAATG
AATATCCAATTTTTTGGTGGTGATCCTAACAAAGTGACAATCCTTGGTGA
ATCTGGCGGTGGTGCTGCAGTGTTTTCATTAATAACATCACCTCTAACGG
ATGGTCTTTTTAATAAAGCTATTGCAGCAAGTGGTTATCCAGTATCTTTA
GAAACGACTTATCAAAGAGCTGATTCGAGATATGGTTCCACTTTCAAAGA
AGATTTAAGATGCTCAAACGGGAATGATGGAGATGTAATGACCTGTCTTC
GTGATAAAACAATGACCAGTATTCTTGACAAGGACCCTTCGATGATGAGA
CCTATAAACGGATCCTCTTGGGTATTCCCTTTCAATCAAAGACTCAACGA
TTACCCCATTCGTGTCATTGATGGTGAAATCATCAATACTCCTTTGGGTT
CACCAGGGAAATATCTCCAAAAAGGCTTGAAAGTTCTTATAGGAAATACT
GCTGCAGAGTTACCCCCACAAAATGCAACTAAAACAATCCAAGGACTTGA
GGAGTTTCTCAAACCAAGGATTCTAAGTTTCACCGATATGGATACTTATG
AGGAATTAATGAATCTGTATCGCCAGAAACGTCCTGAGGATAAAACATCT
CCAGCTGTTATAACACCACAGTTGGTTTACCTCCAGATGGCTGCAGATGT
TGTTTTAAGTTGCCAAACGAACGATATTGTCCATAATATATCAATAGAAT
CTAACTTAACGGTGTACCGGTATCTCCATAGCCAGCCTTTATCGGAAAAC
TGGAATAACGATAAGGAGTATGAATCAACGGCGTACCATGGAATTGATAC
CGATGTTTTATTCGGGATCAAGTATTATTACCCCGATTTTAATATTACGG
ACAGTGACCAGAAACTGATTTTGAACTTCCGTCAAATTGTTAAAGATTTT
GTTTATAGTGCGCCTGAATTTGACACCACCTATACAAATAAAACCATTGA
GTTTTGGGATGATCGAATCTTGACTTGGGATAAACCATACCATGAGAAAG
AATGTCAAGTTTTAAGAGATAATGGATTTTTAAAACGAGCTTGGGGACAA
CTTGGTTGATTGACTTTGGTAACACACGAAGTATTTTTTTATGTTCTGAA
GAAAATGGCTAACAAAAAAGGACTGCTGATCGCGACCCTTATCATACTCA
TCATTGTCGTTGCCGTAACTTTAGCTCTTGTCTTCACATTGAAGAAAGAT
GTTGACAACAAGAGCTTACCAACAAGTTCCTTTAAAGTCGTACAAACAAA
GCAAGGTGGAATCGAAGGGAAAATCATCAAAGTAACCAGAGATGACGGCG
AAACAGAGAATGTGTATCGATTTCGAAATGTCCCGTATGCTGAACCACCT
ATCAGAGGTTTAAGATGGAAAGCTCCTAAACCAATACAGAAACAAAGTAA
AACATTGAAATATAGTGATCAACAGATCTGGTGCGCTCAGATTCAACCCC
CCAATAATATCCTCAATATAACTGAAGATTGTCTTATATTGACTATCAGG
CAACCGGAATCTGCAACTCCTGATCAACCTCTACCAGTATTGTTCTGGAT
TCATGGTGGAGCATTAGCTAGAGGATCAAGCGATTGGTACTACCCTGATG
AACAAACTTCAGCATCTCTCGGTATGGTTACTGTATCCATAAACTATCGA
TTAGGAATCTTCGGTTTTTTATCTATCAAAGAGTTATGGTCAACCAATGA
TGGTGAAGAAGGACAATATGGCAATTTTGGGATCCTGGATATGATCGAAG
CATTGAAATGGGTTAAAATGAATATCCAATTTTTTGGTGGTGATCCTAAC
AAAGTGACAATCCTTGGTGAATCTGGCGGTGGTGCTGCAGTGTTTTCATT
AATAACATCACCTCTAACGGATGGTCTTTTTAATAAAGCTATTGCAGCAA
GTGGTTATCCAGTATCTTTAGAAACGACTTATCAAAGAGCTGATTCGAGA
TATGGTTCCACTTTCAAAGAAGATTTAAGATGCTCAAACGGGAATGATGG
AGATGTAATGACCTGTCTTCGTGATAAAACAATGACCAGTATTCTTGACA
AGGACCCTTCGATGATGAGACCTATAAACGGATCCTCTTGGGTATTCCCT
TTCAATCAAAGACTCAACGATTACCCCATTCGTGTCATTGATGGTGAAAT
CATCAATACTCCTTTGGGTTCACCAGGGAAATATCTCCAAAAAGGCTTGA
AAGTTCTTATAGGAAATACTGCTGCAGAGTTACCCCCACAAAATGCAACT
AAAACAATCCAAGGACTTGAGGAGTTTCTCAAACCAAGGATTCTAAGTTT
CACCGATATGGATACTTATGAGGAATTAATGAATCTGTATCGCCAGAAAC
GTCCTGAGGATAAAACATCTCCAGCTGTTATAACACCACAGTTGGTTTAC
CTCCAGATGGCTGCAGATGTTGTTTTAAGTTGCCAAACGAACGATATTGT
CCATAATATATCAATAGAATCTAACTTAACGGTGTACCGGTATCTCCATA
GCCAGCCTTTATCGGAAAACTGGAATAACGATAAGGAGTATGAATCAACG
GCGTACCATGGAATTGATACCGATGTTTTATTCGGGATCAAGTATTATTA
CCCCGATTTTAATATTACGGACAGTGACCAGAAACTGATTTTGAACTTCC
GTCAAATTGTTAAAGATTTTGTTTATAGTGCGCCTGAATTTGACACCACC
TATACAAATAAAACCATTGAGTTTTGGGATGATCGAATCTTGACTTGGGA
TAAACCATACCATGAGAAAGAATGTCAAGTTTTAAGAGATAATGGATTTT
TAAAACGAGCTTGGGGACAACTTGGTTGATTGACTTTGGTAACACACGAA
GTATTTTTTTATGTTCTGAAGAAAATGGCTAACAAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010524XLOC_010524Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018793-proteinTCONS_00018793-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018793-exon-sc0000306-1575043694:199863..199925TCONS_00018793-exon-sc0000306-1575043694:199863..199925Clytia hemisphaericaexon
TCONS_00018793-exon-sc0000306-1575043694:196249..198216TCONS_00018793-exon-sc0000306-1575043694:196249..198216Clytia hemisphaericaexon
TCONS_00018793-exon-sc0000306-1510915933:199863..199925TCONS_00018793-exon-sc0000306-1510915933:199863..199925Clytia hemisphaericaexon
TCONS_00018793-exon-sc0000306-1510915933:196249..198216TCONS_00018793-exon-sc0000306-1510915933:196249..198216Clytia hemisphaericaexon
TCONS_00018793-exon-sc0000306-1491911889:199863..199925TCONS_00018793-exon-sc0000306-1491911889:199863..199925Clytia hemisphaericaexon
TCONS_00018793-exon-sc0000306-1491911889:196249..198216TCONS_00018793-exon-sc0000306-1491911889:196249..198216Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:196249..199925 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0194719 0.0569644 0.022047 0 2.90292 2.59859 4.96231 6.33213 4.99246 4.68803 8.31013 5.02256 13.6725 13.26 3.43865 5.87313 1.82566 1.81967 5.16417 4.35025 2.06604 2.07034 1.07281 1.24988 8.22559 10.8403 0.169931 0.271919 7.23401 6.9087
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002018CarbesteraseB
IPR029058AB_hydrolase
IPR019826Carboxylesterase_B_AS
Blast
BLAST of TCONS_00018793 vs. Swiss-Prot (Human)
Match: EST2 (Cocaine esterase OS=Homo sapiens GN=CES2 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.071e-39
Identity = 100/290 (34.48%), Postives = 148/290 (51.03%), Query Frame = 3
Query:  168 SSFKVVQTKQGGIEGKIIKVTRDDGETENVYRFRNVPYAEPPIRGLRWKAPKPIQKQSKTLKYSDQQIWCAQ--------------IQPPNNILNITEDCLILTIRQPESATPDQPLPVLFWIHGGALARGSSDWYYPDEQTSASL-GMVTVSINYRLGIFGFLSIKELWSTNDGEEGQYGNFGILDMIEALKWVKMNIQFFGGDPNKVTILGESGGGAAVFSLITSPLTDGLFNKAIAASGYPVSLETTYQRADSRYGSTFKEDLRCSNGNDGDVMT-CLRDKTMTSIL 989
            S+  +  T  G + G ++ V    G    V  F  +P+A+PP+  LR+  P+P +  S     +     C Q              +  P++  +++EDCL L+I  P  +     LPV+ WIHGGAL  G +  Y  D    A+L  +V V I YRLG+ GF S         G++   GN+G LD + AL+WV+ NI  FGG+P++VTI GES GG +V SL+ SP++ GLF+ AI  SG  V+L      + +   ST   +L   +  D + +  CLR K+   IL
Sbjct:   29 SASPIRTTHTGQVLGSLVHV---KGANAGVQTFLGIPFAKPPLGPLRFAPPEPPESWSGVRDGTTHPAMCLQDLTAVESEFLSQFNMTFPSD--SMSEDCLYLSIYTPAHSHEGSNLPVMVWIHGGALVFGMASLY--DGSMLAALENVVVVIIQYRLGVLGFFST--------GDKHATGNWGYLDQVAALRWVQQNIAHFGGNPDRVTIFGESAGGTSVSSLVVSPISQGLFHGAIMESG--VALLPGLIASSADVISTVVANLSACDQVDSEALVGCLRGKSKEEIL 301          
The following BLAST results are available for this feature:
BLAST of TCONS_00018793 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EST21.071e-3934.48Cocaine esterase OS=Homo sapiens GN=CES2 PE=1 SV=1[more]
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