TCONS_00018975 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018975
Unique NameTCONS_00018975
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1427

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018975 ID=TCONS_00018975|Name=TCONS_00018975|organism=Clytia hemisphaerica|type=transcript|length=1427bp
CAACATGGCCTTTTTGGGCCTGAACCTGAACCTTTGTAAATTGAAgtata
atgttttttttgcatCATAATCTGCTTGTtcctgttttcttctttttcat
tttagcaaatgaaaaattgataaaaagtaattaaaaagcAACCACAAGCC
GCTATTACCAGCGCATAGACAACATCATAAATCAATTATAATTGTCGTTG
ccagagaaaaataatttcctaCCAATATCTTCTGGTATTTGTAGTAAGAC
GTGATTCCCAATCAGAGTGGATTTGCATTACAATTATCGATGATCCGATa
atgAAGGAGATTACTTGACATGCCAACCAACATATTGATTCTAGCGAAAT
TGGGTGCTGGTACTGGTAACAGAACAACTGCTGAACGTATCAGGCAGCAC
TTGAACAATTCGGATTTGTGCCCACTTCTTTGTGACGTCACACAATTCCG
ATCACCACGTGACCTTTCTGATTATGTCATCCATAATGACGTCACTTGTC
TCATTGTTATTCATGCGTACAGAgctggaaaatttttaaacgACATCAGT
ATACCATTTGCGTTGGTATTTGGTGGAACTGACGTTCAATGTTCATCCTG
GAATGATCAAGAAAATGCAATCATGGCTGATGTTGTTGCCAAGGCAATAG
TTCTGATCGCGTTTTCAGAAGTCATGAAAGAAGCAGCATCGGTCAAATGG
CCATCGATCTTGAAAGAGAAGAAGATATTTGTACAGCCGCAAGGTGTGAC
GATTGAGAAGATAGGACCAACAAATTATTCGTTTCAACATCTATTCAATG
ATAATGGGATGAGCGaagttaaaacaaaagaaaagATAATTTTCCTGTTT
GTGGGTGGTATTAGACCGGTGAAAGATCCTTTGTTCCTGATTTATACTTT
TGCTCAGATGCATGAAGAGAATGATCGAATCCTGTTTGTCATCATCGGGC
CCATACTGGATGAAGAATATGCTCGCAAATGTCGTCTCGCTACATCAAAa
CTGAAAGGGATATACATGTTTGATCAAATATCACGTGATAAAGTTCATGC
TTTGATACACCAATCTGTTGCTTTGGTCAATTCCTCCATCGAAGAAGGCA
TGGCTGGAGCCATTCTTGAGtcaatgaAAATAGAGACACCAGTTGTTGTT
CGGAATAACCGTGGAAACGCATCCATTGTGCAGCATCAATCCACTGGATT
GCTTTTCCAACACCCACAAgattttagagaGCAAGCCAATCTTCTTTTGG
AAAACTCAACCCTGCGTAGAAACCTCATTCAAAACGCACAAGATTTCATC
GAGTCCAATCACAACCCTGATGTTGAACGTTCTACCTATcacgaaattat
caaaattcttGTCAAACCGTAGTAATTaacaaatacacgtttttttataa
gagaatccaaaatttttgaagcctttg
Run BLAST on NCBI

transcript from alignment at sc0000314:191678..205366+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018975 ID=TCONS_00018975|Name=TCONS_00018975|organism=Clytia hemisphaerica|type=transcript|length=13689bp|location=Sequence derived from alignment at sc0000314:191678..205366+ (Clytia hemisphaerica)
CAACATGGCCTTTTTGGGCCTGAACCTGAACCTTTGTAAATTGAAgtata
atgttttttttgcatCATAATCTGCTTGTtcctgttttcttctttttcat
tttagcaaatgaaaaattgataaaaagtaattaaaaagcAACCACAAGCC
GCTATTACCAGCGCATAGACAACATCATAAATCAATTATAATTGTCGTTG
ccagagaaaaataatttcctaCCAATATCTTCTGGTATTTGTAGTAAGAC
GTGATTCCCAATCAGAGTGGATTTGCATTACAATTATCGATGATCCGATG
TAcgtattttgttatttttttataatgtccAAATACACCTATCTGCAGAC
ACGTGTTTTGTCCTTCCCAGGACTCGTCAGTGCGGCTCgggtaagcgagc
atagactgctgttgtctaaccagagtgctcaaaacactaagTTATGAGCT
TcgcataatcgcttgtggtgaaCGGAGAAGCAGAGCTTGCTTCTCAACAG
AGTCTATAGAGTGCTTAATACATGTCCAAATATACAGTTGCTCCGATTCA
TTCGATCTATAAGGGGACcaaaattttgtgttaaaagaTTCAAATTACAG
AGAATATTTTTTAAGACATTCCAGTGGAAGGACTAAATGTAATGTTTGAT
TTAGAATTACAGaggctcgaattagagagacaGGTTGGCTGTAATGTTCA
ACTTTTGTATTTAAAATAAtcatagtttttattttttattNCtgtgatgg
cttaaagcacgacatctagcccttcgggctttttaTAAATCTGAGGTTGT
GATTACAAAAGGTAAGGTTATGACAGATTATGTGCTCCACTGTAGGCTAA
ATGTAATCAGCATCTAGTAATAAGTATAAGCACTCTTACAAtcgcaattt
ttgaaaaactgacaTTACAACAGACGATTAGgggagtcaacattgagaaa
acaCGTAGATTTTTTTTGTAGTCAGTATAGTTGTAACAtacttttttttc
tcattttactTGACTTTAATAATAGCTATCATTAATCTCCTCTATAAAAG
AACAgtaatgactttttttttattttaacatattttttctGATTATCCCC
ATAATTATTATATTCTATTGTTCTAGAGCACCAAATTTCTATACCCACCG
CATTTTCACGAGTAGAATTTCATTCAATTTATTGATCTTTCATGTTTTGA
CATAGTGATACCGTAACTTAGTGTAATGCCGACGTACCTTGTTTAATTCC
GTCATAGCAATTATCTGGTCCTTTAAATGTTTATGAATAAATCCTTCTGA
GAAGCTGTTAAAGAAATCACTCTAACTATTCTAAAtactttgcagaccag
ataaCGGCTATgacggaattagacaaggtatgtcgaCATAAGACGAATTC
ACGGTAAGTCTCAGTAAGGACAGTGGAGATTTTAACTAGATTTTTGTAAG
CCTTTTTCCATACCTTATCTGTATTCGATCTTTTCATCTATTGGAATAAA
CACGAGCTTTTATTATTAACCTGATCAACCTATTTAGTTTTAGTAATTAC
AATTACATGTACTAGACATTTTGATTGATAGCGGAAATACCAGCAGCTTT
ACTCTTCAAGTTACTCAATAACGACTATAggagatttgaaattttatttt
gtagatTCAATATAATGTATATTTTTCACATGAGAGAAGATTGAGGGAAA
GGCTATGTGATTCCAACCAAAagacccctgtgtcacagacccgctgaggC
CTTAGCCCCagtggaaaatttggcaaaaatttcgttcccggtgggaaaaa
tttcctaaattccagccccactgagaaattgactttgatttcatccccat
tcgaaattcatcgTTCATGCAAATTGcaatccaaaaccatccccactgga
tttggaacaaaataaatttttatccccgctgtaagaaaaagtttcaccgg
ggctgtgagacagtggTGTACCAAACAAGACAGCCAAATCTTTCTTGACG
ATCTTACTTCTCTTTTCTCTAATCTCTCATGGGAGTAATCAATgtaataa
ttgtttttttgtatgTTTACTATATTATTGTTTATTATGAATTTATGAAG
AatactttttcgttttttgtttgttttctttgatttacaAAATTGAAAGA
GATTGAGGGGAAAGCTAAACATTCTTAATTAAAGAGAATtgactacatgt
ttttttttctataagcataacgtttataagcatatacaggCTCAGTTATT
GGTTCCCTAAACAATAGCTCTATTGTCCCTAAACAAtagctctattgttt
aagaacaatagaatgttaagcataatgcgagcctgatataggggtagaca
attgcttataaaaaacatgtatggtGATTTTATAATACATACTTCAACAT
GGCCTTTTTGGGCCTGAACCTGAACCTTTGTAAATTGAAgtataatgttt
tttttgcatCATAATCTGCTTGTtcctgttttcttctttttcattttagc
aaatgaaaaattgataaaaagtaattaaaaagcAACCACAAGCCGCTATT
ACCAGCGCATAGACAACATCATAAATCAATTATAATTGTCGTTGccagag
aaaaataatttcctaCCAATATCTTCTGGTATTTGTAGTAAGACGTGATT
CCCAATCAGAGTGGATTTGCATTACAATTATCGATGATCCGATGTAcgta
ttttgttatttttttataatgtccAAATACACCTATCTGCAGACACGTGT
TTTGTCCTTCCCAGGACTCGTCAGTGCGGCTCgggtaagcgagcatagac
tgctgttgtctaaccagagtgctcaaaacactaagTTATGAGCTTcgcat
aatcgcttgtggtgaaCGGAGAAGCAGAGCTTGCTTCTCAACAGAGTCTA
TAGAGTGCTTAATACATGTCCAAATATACAGTTGCTCCGATTCATTCGAT
CTATAAGGGGACcaaaattttgtgttaaaagaTTCAAATTACAGAGAATA
TTTTTTAAGACATTCCAGTGGAAGGACTAAATGTAATGTTTGATTTAGAA
TTACAGaggctcgaattagagagacaGGTTGGCTGTAATGTTCAACTTTT
GTATTTAAAATAAtcatagtttttattttttattttttaagaatgAAGGA
GATTACTTGACATGCCAACCAACATATTGATTCTAGCGAAATTGGGTGCT
GGTACTGGTAACAGAACAACTGCTGAACGTATCAGGTGcttatttattga
ttttaaagCGACGGGAAGAGTGGGCCTGTAAGGAATTTTTTTGGATGGGG
TATGAACACAGatctataaagcccgaagggctaagtcaactttaagcttt
ctccagcaaaaattttcggagcgcgagatcaaaaaaagtaggcggcaaac
gctatttcgcatctctcaaacaaattgcttgttgtcacgtgattccTTTG
GttggaaatcctaccaaaacttgcttcacttttcgataaaggccgcggAT
CTAATGAAGCCAATCTAATGAAGCCACCATtggtttttttcatttaatat
ACAAACAGAGGCTGGACGAATCTCTTCaactcaaaataaatttttgaaaa
ttatgtggataccccctgaaaaaattacagaaatttcatttcaacccagg
aaaaaatgaaaaaagacttCCCTTAGACCCTCTGCGAACTGTTCTAGGAA
TTCTTAATGCAACGAACGTATTTAAAAGTCTCATTTTCTATTGTCTGGGA
AAATTGAAAGAATCCCCCTTAGGGGCTTCAAACTTATTGTACCTGTCCTG
TAGAAACCTTTTTCACAATATCTTTTTAGTCGTTCTTTTCAAAATTGACA
AACCTTTTATTTTTCCAGGCAGCACTTGAACAATTCGGATTTGTGCCCAC
TTCTTTGTGACGTCACACAATTCCGATCACCACGTGACCTTTCTGATTAT
GTCATCCATAATGACGTCACTTGTCTCATTGTTATTCATGCGTACAGAgc
tggaaaatttttaaacggTTTGGAAATTGTATTACTAAACTTACAGTGCG
GTGTTAAactgggcttttccagaaaaaccgTTCAAAAGTGGAAGATATAA
TATTGTCAAAGGGAACAAAAAAAGACTGTCAAGCACCTCCTTTTTAAACA
GCTTGATCTGAAAATTTTCCACATGTAAATTTGATCAGCATTCTGGTGGT
CCACCAATGTTATCTGATGTAGGCGGTGAGTGACTAGGAGCTGAGGGTTG
GTGTGGCAATCCACTTAAGTATTCAATCTTCCACAGGGCTAGTGCACATA
GAAAAGGATATAGACTCCCTGACTTCCACGGCCAACACTTACATACTTAC
TTCAAACACCTTTCAGACATCAGTATACCATTTGCGTTGGTATTTGGTGG
AACTGACGTTCAATGTTCATCCTGGAATGATCAAGAAAATGCAATCATGG
CTGATGTTGTTGCCAAGGCAATGTGAGTTAAAACCCTAGAAactcaaaaa
atctttatttctgTTGCCAAGGGTAACGAAGGCCAAGGAATCATTTGCAT
TTGCTAATGATAATAAGGCTCAAGCTTAAGCATTTATATAGCTGGTACAG
AGAAAATTTGactattttcatgaaatttccaACGACGGAAAACAACATTA
CCTGAAGTGTAACGGAGCTTAACCTTCGATAAGCATGTTTTCCCATTGTG
TTTCATGCCGAAAGCATGTGGCAAATCTTTAAACCTTTCCCAAGTTTTAC
ATTTACTTTgcgttttatatttttcaaattctggtGGTAAATGTTACTTT
CAATCTATTGTTTGTATGGATTTTTCGTCGCCGTTAGGTAGGTCCGATCA
ACATctagtttgtttttttgtttcgacGGTTTCACTTTCACGAGTCTCAC
TTTATCTACACCTTTTCTTTTAGAGTTCTGATCGCGTTTTCAGAAGTCAT
GAAAGAAGCAGCATCGGTCAAATGGGTAGTGTATTTGTACATCCATCTTT
GAATGACATATTTTTTCTCATAGAAGACGCTACTCGTATATGATTTGTTA
AACTAGCCTATTTTCGGTAGCTTTTacttcaactttttaaatttcgatac
ACGTTttataataagaaaaaactatataatgAGCATCCTTATATGCTgtg
gctaaaatattaagaacaagctaaggaCATTCTGAGGAtctgcagactct
aaaacactaaatttttaagaaattgcacaaaatggtgaaattaagaacat
taaaaaaaaattaggcttaaaactttGAGAAtatccgaaggtttcaaaaa
ctgtttttattAGTAAAAGAAAACGTATATTTCACTAAATTCAGTTTTCA
TCGGTAATTTCTTCTTCGTTCTTCTTTTAGCCATCAATCttgaaagagaa
aaagatatTTGTACAACCGCAAGGTAAAAGTCATTCCTCCCTTTTTCGCT
CCGTGCATCTTAAACCACCGTGTTAGTGCGATTGAACTCCTATTTGCAGT
TCTCATCAAGTGTAATCCGCTTGGGTGTCAGATTTTGATTAGTTTGTAAT
gcaaagttgtattttttttcgTTGTCAGGTGTGACAATTGAGAGGATAGG
ACCGACAAATTATTCGTTTCAACATCTATTCAATGATAATGGGATGGTGA
GTTTGAACTTTGTCTCTCTCGATGATGGATTGTTACTTGTCAAGTACCAT
TAGCAAGTTCTAGACGCGGGACATTATAGCCTCTATAATGAGAAAATCAA
TTCATTATTTCCTGTTCTTTCTCTGCAGAGCGatgttaaaacaaaagaaa
aggtaCCGATTTTCAATTGATCTATCTTGACTGAAGTTATCACAtattgg
acttttccagaaaaaaacctgttgaggaggtccatccctctttggctgga
aatgctgtaacctGCTGTAACCCCCTAGAATttcaggcaatttcaggttt
aaacccttctggaattctgaattttagtaggatttaaaaagctaccccca
tggaattccagtcaTTTTTGACAGATTTNCTTTTTCCATACCTTATCTGT
ATTCGATCTTTTCATCTATTGGAATAAACACGAGCTTTTATTATTAACCT
GATCAACCTATTTAGTTTTAGTAATTACAATTACATGTACTAGACATTTT
GATTGATAGCGGAAATACCAGCAGCTTTACTCTTCAAGTTACTCAATAAC
GACTATAggagatttgaaattttattttgtagatTCAATATAATGTATAT
TTTTCACATGAGAGAAGATTGAGGGAAAGGCTATGTGATTCCAACCAAAa
gacccctgtgtcacagacccgctgaggCCTTAGCCCCagtggaaaatttg
gcaaaaatttcgttcccggtgggaaaaatttcctaaattccagccccact
gagaaattgactttgatttcatccccattcgaaattcatcgTTCATGCAA
ATTGcaatccaaaaccatccccactggatttggaacaaaataaattttta
tccccgctgtaagaaaaagtttcaccggggctgtgagacaggggtgtacc
aAACAAGACAGCCAAATCTTTCTTGACGATCTTACTTCTCTTTTCTCTAA
TCTCTCATGGGAGTAATCAAtgtaataattatttttttgtatgtTTACTA
TATTATTGTTTATTATGAATTTATGAAGAATACTTttcgttttttgtttg
ttttctttgatttacaAAATTGAAAGATATTTGAGGGGAAAGCTAAACAT
TCTTAATTAAAGAGAATtgactacatgtttttttttctataagcataacg
tttataagcatatacaggCTCAGTTATTGGTTCCCTAAACAAtagctcta
ttgtttaagaacaatagaatggtAAGCGTAATGtgagcctgatatagggg
tagacaattgcttataaaaaaacatgtatggtGATTTTATAATACATACT
TCAACATGGCCTTTTTGGGCCTGAACCTGAACCTTTGTAAATTGAAgtat
aatgttttttttgcatCATAATCTGCTTGTtcctgttttcttctttttca
ttttagcaaatgaaaaattgataaaaagtaattaaaaagcAACCACAAGC
CGCTATTACCAGCGCATAGACAACATCATAAATCAATTATAATTGTCGTT
GccagagaaaaataatttcctaCCAATATCTTCTGGTATTTGTAGTAAGA
CGTGATTCCCAATCAGAGTGGATTTGCATTACAATTATCGATGATCCGAT
GTAcgtattttgttatttttttataatgtccAAATACACCTATCCGCAGA
CAAGtgtttcgtccttcccaggactcatcAGTGCGACTTgggtaagcgag
catagactgctgttgtcgcaccagagtgctcaaaacactaagTGTTGAGC
TTCGCGTAATCGCTTGTGGTGAACGGAGAAGCAGAGCTTGCTCCTCAACA
GAGTCTATAGAGTGCTTAATACATGTCCAAATATACAGTTGCTCCGATTC
ATTCGATCTACAAGGGGACcaaaattttgtgttaaaagaTTCAAATCACA
GAGAATATTTTTTAAGACATTCCAGTGGAAGGACTAAATTTAATGTTTGA
TTTAGAATTACAGaggctcgaattagagagacaGGTTGGCTGTAATGTTC
AACTTTTGTatttaaaataatcataatttttattttttattttttaagaa
tgAAGGAGATTACTTGACATGCCAACCAACATATTGATTCTAGCGAAATT
GGGTGCTGGTACTGGCAACAGAACCACTGCTGAACGTATCAGGtgcttat
ttatttattttaaagcGACGGGAAGAGTGGGCCTGTAAGGAATTTTTTTG
GATGGGGTATGAACACAGatctataaagcccgaagggataagtcaacttt
aagctttctccagcaaaagttttcggagcgcgagatcaaaaaaagtaggc
agcaaacgctatttcgcatctctcaaacaaATTGcctgttgtcacgtgat
ttctttggtaggaaatcctaccaaaacttgcttcacttttcgatgaAGGC
CGCGGATCTAATGAAGCCACCATtggtttttttcatttaatatACAAACA
GAGGCTGGACGAATCTCTTCaactcaaaataaatttttgaaaattatgtg
gataccccctgaaaaaattacagaaatttcatttcaacccaggaaaaaat
gaaaaaagacttCCCTTAGACCCTCTGNTGGAAAAATGAcagaaatttca
tttcaacccaggaaaaaagaagaaaaaaaacttcccTTAGACCCTCTGCG
AACTGTTCTAGGAATTCTTAATGCAACGAACGTATTAAAGTCTCATTTTC
TATTGTCTGGGAAAATTGAAAGAACCCCCCTTAGGGGCTTCAGAGTTATT
GTACCTGTCCTGTAAAAACCTTTTTCACAATATCTTTTTAGTCGTTCTTT
TCAAAATTGACAAACCTTTTATTTTTCCAGGCAGCACTTGAACAATTCGG
ACTTGTGCACACTTCTTTGTGACGTCACACAATTCCAATCACCACGTGAC
CTTTCTGATTATGTCATTCATAATGACGTCACTTGTCTCATTGTTATTCA
TGCGTACAGAgctggaaaatttttaaacggTTTGGAAATTGTATTACTAA
ACTTACAGTGCGTTGTTAAactgggcttttccagaaaaaccgTTCAAAAG
TGGAAGATATATTGTCAAAGGGAACAAAAAAAGACTGTCAAGCACCTCCT
TTTTAAACAACTTgatctgaaaatttttccacATGTAAATTTGATCAGCA
TTCTGGTGGTCCACCAATGTTATCTGATGTAGGCGGTGAGTGACTAGGAG
CTGAGGGTTGATGTGGCAATCCACTTAAGTATTCAATCTTCCACAGGGCT
AGTGCACATAGAAAAGGATATAGACTCCCTGACTTCCACGGCCAACACTT
ACATACTTACTTCAAACACCTTTCAGACATCAGTATACCATTTGCGTTGG
TATTTGGTGGAACTGACGTTCAATGTTCATCCTGGAATGATCAAGAAAAT
GCAATCATGGCTGACGTTGTTGCCAAGGCAATGTGAGTTAAAACCCTAGA
AactcaaaaaatctttatttctgTTGCCAAGGGTAACCAAGGCCAAGGAA
TCATTTGCATTTGCTAATGATAATAAGGCTCAAGCTTAAGCATTTATATA
GCTGGTACAGAGAAAATTTGactattttcatgaaatttccaACGACGGAA
AACAACATTACCTGAAGTGTAACGGAGCTTAACCTTCGATAAGCATGTTT
TCCCATTGTGTTTCATGCCGAAAACATGTGGCAAATCTTTAAACCTTTCC
CAAGTTTTACATTTACTTTgcgttttatatttttcaaattctggtGGTAA
ATGTTACTTTCAATCTATTGTTTGTATGGATTTTTCGTCGCCGTTAGGTA
GGTCCGATCAACAtctagtttgttttttttgtttcgacGGTTTCACTTTC
ACGAGTCTCACTTTATCATTTATACCTTTTCTTTTAGAGTTCTGATCGCG
TTTTCAGAAGTCATGAAAGAAGCAGCATCGGTCAAATGGGTAGTGTATTT
GTACATCTATCTTTGAGTGACATATTTTTTCTCATAGAAGACGCTACTCG
TATATGATTTGTTTAAACTAACCTATTTTCGGTAGCTTTTACTTCAACTT
ATTAAAATTCGAATcacgttttttataataagaaaaaattatataagAGC
ATCCTTATATGCTgtggctaaaatattaagaacaagctaagaacattctG
AGGAtctgcagactctaaaacactaaatttttaagaaattgcacaaaatg
gtgaaattaagaacatttaaaaaaaattaggcttaaaactttGAGAAtat
ccgaaggtttcaaaaactgtttttattaaaagaaaacgTATATTTCACTA
AATTCAGTTTTCATGAAAGGTaatttcttcttcattcttctttcAGCCAT
CGATCTTGAAAGAGAAGAAGATATTTGTACAGCCGCAAGGTGAAAGTCAC
TCCTTCTTTCTTGCTCCATGCATGTTAAACCACCATGTTGTTCTAAATTT
TTATTCTATATCCTCAGGAAAACATGCAATTGGCCTTTTACAGTTTCTCA
TCAAGTGTAATCCGCCGGCGTgcgaattgagggggccaaaaaatatgttg
cccaccatggttgggcgaagaagaaaattttcgacttttcacccttattt
cacccctctaaacggtacatataagattttttaaagtaaaaaaaaattat
gcccCCACCCCCCTGGTGACTGGGTTTTGATTTGTTTGTAGTAATgcaaa
gttgtattttttttcgTTGTCAGGTGTGACGATTGAGAAGATAGGACCAA
CAAATTATTCGTTTCAACATCTATTCAATGATAATGGGATGGTGAGTTTG
AACTTTGTCTCTCGATGATGGATTTTTACTTGTCAAGTACCTTTAGCAAG
TTCTGGACAAGTACGGCATGGTaacctttttaatgaaaaaatccaTTCTT
TCTTTGCAGAGCGaagttaaaacaaaagaaaaggtatagattttcaatta
ttttaccTGACTGAAGTTATCACTTTTAAAGATACTTTATTCTCTGTGTT
GGAGCGGATTAGGACTGTACATAGTTTGACCCCTCCCCCTTTCTCCGCAA
TCTTTTAAAGGTTGGGAGGTTGCCAAGAATGGGGGAGTCATTTAAGAAGG
AGGGAAATcggacccctttccgcactatgactGCAAGCCTCGAAATTGTG
ATAAAGATTTGGAATTTGCACAGACACTCTTCTATAGGTCATTTCTCAGT
CGCAAACCGTAATGGTTAATCAGAACATATCAGGGCCAgtgcgcgctaat
gacgacttactatggtctaaagttttgaaattttttaaagattattgcAT
CTAGCCAAACAGAAAGCcgttatggaggcgcaatcagtcctgattaccca
tgatccagttcgactgtgaaatggtctATGGAGAAAACGAATATATTTTA
GAGACTCTTTAAAAGATGTTTGTTGACaaagaattatttatttttgaacg
TTTTTTTCTCTCGAATAGTTCGATTTTTTTCATCACTTCAGATAATTTTC
CTGTTTGTGGGTGGTATTAGACCGGTGAAAGATCCTTTGTTCCTGATTTA
TACTTTTGCTCGTAAGTGAGTTTATAATTATATATTTTCTAATAAGAGCA
GTGTCCTCTTTTACTTAGATTACCCCGCCCCTCACCGTACCCTTTAAATT
AACTACTTACACTAAGTACAttaattatcatttttcaagtcttgaaaaag
ttgaacCATGGAATATTTTACCTTTAAGATAAAGAATATTTGATGTAAAC
TGTAGGGTCCAATCCGTCAAAATCAGATTGTTGAATTTGTTGGGGAATAT
TAAAAAAGCATTGTCACTAATAAGGTGCTGCCTTTATTCTGAAACCGCCG
GACTCTacttctttatacctctataaGTTTTGCCCTAATGAGTtttcata
atttatgcaaaaatattcaaatcatGATAATTATTCAGGAAGAACCCCCA
TCGACTGAAAGAAAACACTAAAAAAAGAGACTGAAGAggcagaatttaaa
aaaagtgaacaaaGGGACTGGGATGGAGTTTGATTTATTTATAATTCTTT
GTTCAGAGATGCATGAAGAGAATGATCGAATCCTGTTTGTCATCATCGGG
CCCATACTGGATGAAGAATATGCTCGCAAATGTCGTCTCGCTACATCAAA
GTAAGAATGTCATACAGTGGAAAGTGAATTCTTGGTGTTTCTCATGTGGA
CAGTTTTGTTTAACATTCGGTTTTGTGATAAGCATTTTAATTGGAATTTT
GActtaactttgctttttgatcatttttgacGACCCTGAGTAGACTAAGG
CCGCTTAATCGCACCATCCGGTCTAGTTAGAACATAGACGTCATATCAAA
TTGCAAAATCCCAAGTCTATTAAAAAGCTGTAAGTAGACCCCGGGCTAGT
TGATTGGTAGATTTGTTTTAGTTGTTTTCATTGGACCTAAAAATCACTTC
AATCTCATTTTCTCTCTTAAAACACTTGTCTCATCTATAATTCTAGttat
cattttgtttttttgcagaCTGAAAGGGATATACATGTTTGATCAAATAT
CACGTGATAAAGTTCATGCTTTGATACACCAATCTGTTGCTTTGGTCAAT
TCCTCCATCGAAGAAGGCATGGCTGGAGCCATTCTTGAGGTAATGGTTTC
ACGAATCTCGATGCACTATTATAGGATTGCAAACACACAATTTTAATTCT
CACCGCCAAAAGTGCTCAACGAAAGCTCAAAACGttgaaatcattaaaaa
aatagaCATGTGTGACTTTAGGAACTTAAAGTTTCTTGCCGTCCTTATGA
ACGACAATCATtaaccaaaaataaaatcttaaatacaaaatttggacaaa
aaggATTACAAGTAAGAACAAACAAAAAGTATTTGGTGGTCATAATAAGC
TCAGTCCTCCAGGCACTAATTCGTGCACGTGATATTTTCGGAAAGATGCC
CAAACCACAAAATAGGATGTTTGATATCTGACCCTTCGATTACTTAAAAC
TTgttttacattttaaatttttttttcagtcaatgaAAATAGAGACACCA
GTTGTTGTTCGGAATAACCGTGGAAACGCATCCATTGTGCAGCATCAATC
CACTGGATTGCTTTTCCAACACCCACAAGTAGGCTCATTTTTACATTACA
GATTGGACTTTCTACACTCGATTCGAAACTTAAGATTTAAAATTAGATAA
GGAATTTTAATTGAACCCACACGGAAGTNAATTGGACACTTAAGATTTGA
AATTAGATATGGAATTTTAACCGAATCTACACGGAAGTCATTTGACTGAT
CATGATCTGTGTATTTCGCCCTTGTGCTTTACTTGGgaaaatttaaaaga
tattctttgaaagATCACAGAGCTGTGAATCGTCGTGATTCTCTTTCACA
TGGATGTTgaactcaaaaattatcaactatCTTTTCTTCAACTTTAGTGC
TGAATTTAATTGTATTACGGCCACTTTATTTATCGAAATGCAAGGTCTTT
CATTATCCCATAGCAACAGGTCATTCATTCTGTGTAAGTGTGGAACAATC
AGAAACTGCTTTGAGATTAGGTCTCTCTTGAGTTACGTCAACCTTTTTGT
TTNAGAAACTGCTTTGAGATTAAGTCTCTCTTGAGTTACGtaaacctttt
tgtttcatctGGAAACAGACCTTCAATCTTTAGGCCAACGTACCTCTAAG
AAATTCCGTTGGAAATAAATTGTCATAATATATTTCGAAAATGAGGTGCG
AATTGTTCACGGcttgatttctaaaaaaggcCTATACAGTATCTTTCGAA
AATTCATAAAAgtctctctctttttttttaggattttagagaGCAAGCCA
ATCTTCTTTTGGAAAACTCAACCCTGCGTAGAAACCTCATTCAAAACGCA
CAAGATTTCATCGAGTCCAATCACAACCCTGATGTTGAACGTTCTACCTA
TcacgaaattatcaaaattcttGTCAAACCGTAGTAATTaacaaatacac
gtttttttataagagaatccaaaatttttgaagcctttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010638XLOC_010638Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018975-exon-sc0000314-1491911889:191678..191976TCONS_00018975-exon-sc0000314-1491911889:191678..191976Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:191678..191976TCONS_00018975-exon-sc0000314-1510915933:191678..191976Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:191678..191976TCONS_00018975-exon-sc0000314-1575043694:191678..191976Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:194819..194912TCONS_00018975-exon-sc0000314-1491911889:194819..194912Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:194819..194912TCONS_00018975-exon-sc0000314-1510915933:194819..194912Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:194819..194912TCONS_00018975-exon-sc0000314-1575043694:194819..194912Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:195546..195694TCONS_00018975-exon-sc0000314-1491911889:195546..195694Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:195546..195694TCONS_00018975-exon-sc0000314-1510915933:195546..195694Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:195546..195694TCONS_00018975-exon-sc0000314-1575043694:195546..195694Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:196044..196149TCONS_00018975-exon-sc0000314-1491911889:196044..196149Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:196044..196149TCONS_00018975-exon-sc0000314-1510915933:196044..196149Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:196044..196149TCONS_00018975-exon-sc0000314-1575043694:196044..196149Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:201215..201266TCONS_00018975-exon-sc0000314-1491911889:201215..201266Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:201215..201266TCONS_00018975-exon-sc0000314-1510915933:201215..201266Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:201215..201266TCONS_00018975-exon-sc0000314-1575043694:201215..201266Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:201674..201716TCONS_00018975-exon-sc0000314-1491911889:201674..201716Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:201674..201716TCONS_00018975-exon-sc0000314-1510915933:201674..201716Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:201674..201716TCONS_00018975-exon-sc0000314-1575043694:201674..201716Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:202051..202118TCONS_00018975-exon-sc0000314-1491911889:202051..202118Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:202051..202118TCONS_00018975-exon-sc0000314-1510915933:202051..202118Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:202051..202118TCONS_00018975-exon-sc0000314-1575043694:202051..202118Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:202237..202260TCONS_00018975-exon-sc0000314-1491911889:202237..202260Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:202237..202260TCONS_00018975-exon-sc0000314-1510915933:202237..202260Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:202237..202260TCONS_00018975-exon-sc0000314-1575043694:202237..202260Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:202819..202888TCONS_00018975-exon-sc0000314-1491911889:202819..202888Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:202819..202888TCONS_00018975-exon-sc0000314-1510915933:202819..202888Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:202819..202888TCONS_00018975-exon-sc0000314-1575043694:202819..202888Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:203384..203477TCONS_00018975-exon-sc0000314-1491911889:203384..203477Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:203384..203477TCONS_00018975-exon-sc0000314-1510915933:203384..203477Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:203384..203477TCONS_00018975-exon-sc0000314-1575043694:203384..203477Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:203846..203966TCONS_00018975-exon-sc0000314-1491911889:203846..203966Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:203846..203966TCONS_00018975-exon-sc0000314-1510915933:203846..203966Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:203846..203966TCONS_00018975-exon-sc0000314-1575043694:203846..203966Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:204357..204455TCONS_00018975-exon-sc0000314-1491911889:204357..204455Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:204357..204455TCONS_00018975-exon-sc0000314-1510915933:204357..204455Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:204357..204455TCONS_00018975-exon-sc0000314-1575043694:204357..204455Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1491911889:205159..205366TCONS_00018975-exon-sc0000314-1491911889:205159..205366Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1510915933:205159..205366TCONS_00018975-exon-sc0000314-1510915933:205159..205366Clytia hemisphaericaexon
TCONS_00018975-exon-sc0000314-1575043694:205159..205366TCONS_00018975-exon-sc0000314-1575043694:205159..205366Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000314supercontigsc0000314:191678..205366 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.0745	0	0.304683	0	0	0	0	0	0	0	0	0	0	0	0	0.370189	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00018975 vs. Swiss-Prot (Human)
Match: GL1D1 (Glycosyltransferase 1 domain-containing protein 1 OS=Homo sapiens GN=GLT1D1 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 4.221e-72
Identity = 117/343 (34.11%), Postives = 196/343 (57.14%), Query Frame = 2 
Query:  332 ILILAKLGAGTGNRTTAERIRQHLNNSDLCPLLCDVTQFRSPRDLSDYVIHNDVTCLIVIHAYRAGKFLNDISIPFALVFGGTDVQCSSWNDQENAIMADVVAKAIVLIAFSEVMKEAASVKWPSILKEKKIFVQPQGVTIEKIGPTNYSFQHLFNDNGMSEVKTKEKIIFLFVGGIRPVKDPLFLIYTFAQMHEENDRILFVIIGPILDEEYARKCRLATSKLKGIYMFDQISRDKVHALIHQSVALVNSSIEEGMAGAILESMKIETPVVVRNNRGNASIVQHQSTGLLFQHPQDFREQANLLLENSTLRRNLIQNAQDFIESNHNPDVERSTYHEIIKIL 1360
            +L LA L   TGN  TA+R+R HL  +    +L D   F S  ++++ ++  +    + +H YR G+ L    IPF ++FGGTDV   +   ++N +M  V+ +A   +AF+E MKE A  +WP    + K++VQ QG+        N++    F              IFL + G+R VKDPL+L+  F+  H+E   +  VI+GP +D  + R+ +    +  G+ +  ++ ++ +HA++    A+VNSS+ EGM+ AILE+M +E PV+ RN  GNA++V+H+ TGLLF +PQ+F   A  L+ +  L + ++ N ++++   H+  VER TY ++I+ L
Sbjct:    3 LLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAALALHLYRGGRLLQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEMAQAQWPH--AKGKVYVQSQGIATTPNAAFNWN---TFLQRSEINQSADNLHIFLLICGLRQVKDPLYLVDAFSAWHQEEPNVHLVIVGPEVDPVFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILEAMDLEVPVLARNIPGNAAVVKHEVTGLLFSNPQEFVHLAKRLVSDPALEKEIVVNGREYVRMYHSWQVERDTYQQLIRKL 340
The following BLAST results are available for this feature:
BLAST of TCONS_00018975 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GL1D14.221e-7234.11Glycosyltransferase 1 domain-containing protein 1 ... [more]
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